BLASTX nr result

ID: Ophiopogon21_contig00019344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00019344
         (571 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008777994.1| PREDICTED: F-box protein SKIP23-like isoform...    61   4e-07
ref|XP_008777991.1| PREDICTED: F-box protein At2g26160-like isof...    61   4e-07
ref|XP_010930515.1| PREDICTED: F-box protein SKIP23-like [Elaeis...    60   1e-06
emb|CDP07322.1| unnamed protein product [Coffea canephora]             60   1e-06
ref|XP_010931853.1| PREDICTED: putative F-box protein At5g55150 ...    57   5e-06

>ref|XP_008777994.1| PREDICTED: F-box protein SKIP23-like isoform X2 [Phoenix
           dactylifera]
          Length = 378

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
 Frame = -1

Query: 415 YEDQV--EIEIFKLDLNGEL-KWSRVNSIGDXXXXXXXXXXXXXXATQFPGCKPDSLYFS 245
           ++D V  ++++FKLDL+G+L +WS++ SI D              A+ FPGC+ D +YF 
Sbjct: 268 WDDDVRKDLKLFKLDLSGQLLRWSKIESIDDKALFSAEDHCSMICASDFPGCREDCIYFE 327

Query: 244 GCCFGRELLEPGVHGMEIFNVKGNDYERLPVPYPRGGTGKELKNPTWFTPSFC 86
                 +  +   H +E+ ++K   YE +   + +     +   P WF PS C
Sbjct: 328 APYDIFQRFKSKFHHIEVLDIKNGSYEFICCRWEK--PSNDSMKPIWFAPSLC 378


>ref|XP_008777991.1| PREDICTED: F-box protein At2g26160-like isoform X1 [Phoenix
           dactylifera] gi|672200888|ref|XP_008777993.1| PREDICTED:
           F-box protein At2g26160-like isoform X1 [Phoenix
           dactylifera]
          Length = 382

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
 Frame = -1

Query: 415 YEDQV--EIEIFKLDLNGEL-KWSRVNSIGDXXXXXXXXXXXXXXATQFPGCKPDSLYFS 245
           ++D V  ++++FKLDL+G+L +WS++ SI D              A+ FPGC+ D +YF 
Sbjct: 272 WDDDVRKDLKLFKLDLSGQLLRWSKIESIDDKALFSAEDHCSMICASDFPGCREDCIYFE 331

Query: 244 GCCFGRELLEPGVHGMEIFNVKGNDYERLPVPYPRGGTGKELKNPTWFTPSFC 86
                 +  +   H +E+ ++K   YE +   + +     +   P WF PS C
Sbjct: 332 APYDIFQRFKSKFHHIEVLDIKNGSYEFICCRWEK--PSNDSMKPIWFAPSLC 382


>ref|XP_010930515.1| PREDICTED: F-box protein SKIP23-like [Elaeis guineensis]
           gi|743759135|ref|XP_010930525.1| PREDICTED: F-box
           protein SKIP23-like [Elaeis guineensis]
           gi|743759137|ref|XP_010930535.1| PREDICTED: F-box
           protein SKIP23-like [Elaeis guineensis]
          Length = 383

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
 Frame = -1

Query: 463 LLKANMEMFLVGNFGNYEDQV-EIEIFKLDLNGEL-KWSRVNSIGDXXXXXXXXXXXXXX 290
           LL A    FL   F   +D V ++++FKLDL+G L +WS + SI D              
Sbjct: 258 LLLARDPRFLDPRFVFRDDDVKDLKLFKLDLSGRLLRWSEIESIEDMAVFSAEDHCSMIC 317

Query: 289 ATQFPGCKPDSLYFSGCCFGRELLEPGVHGMEIFNVKGNDYERLPVPYPRGGTGKELKNP 110
              FPG + D +YF       +  +   H +E+ N+K   YE +   + +     +L  P
Sbjct: 318 VGDFPGFREDCIYFEAPYDIFQRFKNKFHHIEVLNIKNGSYEFIWCGWEK--PSNDLMKP 375

Query: 109 TWFTPSFC 86
            WF PS C
Sbjct: 376 IWFAPSLC 383


>emb|CDP07322.1| unnamed protein product [Coffea canephora]
          Length = 404

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
 Frame = -1

Query: 511 IRSPFAFDFDPIGGSYLLKANMEMFLVGNF--------------GNYEDQVEIEIFKLDL 374
           IR+P   D D     YL+ AN E+ LV  +              G YE + E  +FKLDL
Sbjct: 253 IRTPGLSDGDM---QYLVIANGELLLVTRYLELASDLGQLQIGIGTYETR-EFRVFKLDL 308

Query: 373 NGELKWSRVNSIGDXXXXXXXXXXXXXXATQFPGCKPDSLYFSGCCFGRELLE-PGVHGM 197
           +G  KW RV S+GD              A+ FP C+ + +YF+      +    PG H +
Sbjct: 309 SGS-KWERVMSLGDTMLFLGENSSLALVASDFPECRGNRIYFTDDFSELDYSGFPGNHDL 367

Query: 196 EIFNVKGNDYERLPVPYPRGGTGKELKNPTWFTPSFC 86
            IF+++    E+LP       +  +   P W TP+ C
Sbjct: 368 GIFDLEDGTIEQLPCHPRTSHSHLQWPPPIWITPNPC 404


>ref|XP_010931853.1| PREDICTED: putative F-box protein At5g55150 [Elaeis guineensis]
          Length = 378

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
 Frame = -1

Query: 466 YLLKAN-MEMFLVGNFGNYEDQVEIEIFKLDLNGE-LKWSRVNSIGDXXXXXXXXXXXXX 293
           +L+KA+  E+            +++  FK+DL+G+ L+WS ++ IGD             
Sbjct: 246 FLVKASETELLFCAYSRELSGGMDLRHFKMDLSGQMLEWSEIDGIGDKALFLTREKCSCS 305

Query: 292 XAT--QFPGCKPDSLYFSGCCFGRELLE---PGVHGMEIFNVKGNDYERLPVPYPRGGTG 128
                 FPGCK   +Y+    F  +L++   P  H +++ N+K   YE +      G + 
Sbjct: 306 MVCARDFPGCKEGCVYYETPFFDDDLVDAFLPQNHNIKVINIKDGSYEFIRCA-ALGTSA 364

Query: 127 KELKNPTWFTPS 92
           K L  P WFTPS
Sbjct: 365 KHLMAPVWFTPS 376


Top