BLASTX nr result

ID: Ophiopogon21_contig00019319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00019319
         (702 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004297943.2| PREDICTED: putative F-box protein At4g22660 ...    65   3e-08
ref|XP_008805972.1| PREDICTED: F-box protein SKIP23-like [Phoeni...    60   1e-06
ref|XP_004308486.1| PREDICTED: putative F-box protein At4g22660 ...    57   9e-06

>ref|XP_004297943.2| PREDICTED: putative F-box protein At4g22660 [Fragaria vesca subsp.
           vesca]
          Length = 362

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 35/97 (36%), Positives = 43/97 (44%)
 Frame = -3

Query: 292 RWGELPGEXXXXXXXXXXXQDHLRFSRVCVPWNLAVRGGRLGCRPSPMPQLPWLMIAGAG 113
           +W ELP E            D LRF  VC  W LA +        +P+PQ PWLM+    
Sbjct: 6   KWHELPVEVLELIMNKIASMDILRFEAVCSSWKLAAKSYVASPYYNPLPQTPWLMLRNNQ 65

Query: 112 RDHTHAKFISLSEHRAYDXXXXXXXIRERLCVGSSHG 2
            D    +F SL E R Y         ++  CVGSSHG
Sbjct: 66  EDKKSWRFFSLEEKRVYTIKNVFEGFQDDWCVGSSHG 102


>ref|XP_008805972.1| PREDICTED: F-box protein SKIP23-like [Phoenix dactylifera]
          Length = 398

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
 Frame = -3

Query: 289 WGELPGEXXXXXXXXXXXQDHLRFSRVCVPWNLAVRGGRLGCRPSPMPQLPWLMI----- 125
           W ELP E            DHLRF  VC  W  A +        +P+ Q PWLMI     
Sbjct: 3   WSELPSELLGSILERLPVPDHLRFGLVCSSWRSAAKSNLF----APVAQSPWLMIPFNPN 58

Query: 124 AGAGRDHTHAKFISLSEHRAYDXXXXXXXIRERLCVGSSHG 2
             +    + A+F SLSE + Y        + +RLC+GSS+G
Sbjct: 59  TTSPSAKSSAQFYSLSERKVYRIPLPDPPVSDRLCIGSSYG 99


>ref|XP_004308486.1| PREDICTED: putative F-box protein At4g22660 [Fragaria vesca subsp.
           vesca]
          Length = 445

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
 Frame = -3

Query: 292 RWGELPGEXXXXXXXXXXXQDHLRFSRVCVPWNLAVRGGRLGCRPSP-----MPQLPWLM 128
           RW +LP E            D LRF  VC  W    +        SP     MPQ PWLM
Sbjct: 19  RWSDLPPELLELIMKKLASVDILRFEAVCSRWCKTAKS----YISSPYFTLDMPQTPWLM 74

Query: 127 IAGAGRDHTHA-KFISLSEHRAYDXXXXXXXIRERLCVGSSHG 2
           I G   +H H  +F +LSE + Y        + +  C+GSSHG
Sbjct: 75  IPGGEGNHIHTRRFFNLSEFKYYTIKNTFGYMPDACCIGSSHG 117


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