BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00018227
         (4706 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010913419.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1617   0.0  
ref|XP_008798022.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1613   0.0  
ref|XP_008798023.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1607   0.0  
ref|XP_009414118.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1588   0.0  
ref|XP_010272118.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1553   0.0  
ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1530   0.0  
emb|CBI32069.3| unnamed protein product [Vitis vinifera]             1530   0.0  
ref|XP_006647863.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1519   0.0  
ref|NP_001048065.1| Os02g0739000 [Oryza sativa Japonica Group] g...  1510   0.0  
ref|XP_002454314.1| hypothetical protein SORBIDRAFT_04g028500 [S...  1509   0.0  
ref|XP_004953907.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1508   0.0  
ref|XP_008646222.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1507   0.0  
ref|XP_008221485.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1497   0.0  
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...  1494   0.0  
ref|XP_009596143.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1494   0.0  
ref|XP_007227036.1| hypothetical protein PRUPE_ppa000444mg [Prun...  1491   0.0  
ref|XP_009765632.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1490   0.0  
ref|XP_007044458.1| DEAD/DEAH box helicase, putative isoform 1 [...  1488   0.0  
gb|KQK02003.1| hypothetical protein BRADI_3g59790, partial [Brac...  1486   0.0  
ref|XP_003570680.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1486   0.0  

>ref|XP_010913419.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            isoform X1 [Elaeis guineensis]
          Length = 1169

 Score = 1617 bits (4186), Expect = 0.0
 Identities = 817/1048 (77%), Positives = 915/1048 (87%), Gaps = 12/1048 (1%)
 Frame = -1

Query: 3503 EGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSVVVSAPTS 3324
            E  K QR+ERLLA+VRE GE IIDF+ELA IYDF IDKFQ LA+Q+FLRGSS+VVSAPTS
Sbjct: 123  EEHKWQRIERLLAEVREFGEGIIDFEELAGIYDFPIDKFQHLAVQAFLRGSSIVVSAPTS 182

Query: 3323 SGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGDSSINKDA 3144
            SGKTLI         A+GRRLFYTTPLKALSNQKFR+FR++FGENNVGLLTGDS++NKDA
Sbjct: 183  SGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRRTFGENNVGLLTGDSAVNKDA 242

Query: 3143 QILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCSKE 2964
             ILIMTTEILRNMLYQSVG+ S+  +LF VDVIVLDEVHYLSDISRGTVWEEIVIYC KE
Sbjct: 243  PILIMTTEILRNMLYQSVGMISTESRLFRVDVIVLDEVHYLSDISRGTVWEEIVIYCPKE 302

Query: 2963 VQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLLDEKGKKM 2784
            VQLICLSATVANPDELAGWIG+IHGKTELVTS +RPVPLTWHFSLKNS+  LLD+KG +M
Sbjct: 303  VQLICLSATVANPDELAGWIGKIHGKTELVTSTKRPVPLTWHFSLKNSLSPLLDDKGTRM 362

Query: 2783 NRKLSINYLQSSMSRPEAYSESNKRSYKMGKPERGMNRVSSISRQA-LSKGEINSLRRTQ 2607
            NRKLS+N+LQ +  R E  + +  R +KMGK ++    V+SIS+Q  LSK + NS+RR+Q
Sbjct: 363  NRKLSLNHLQPTAPRTEPSNGNKMRKHKMGKVQQRFG-VASISKQTPLSKNDTNSIRRSQ 421

Query: 2606 VPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVELRLRKFRMQ 2427
            VPQIRDTL  L  +DMLPAIWFIFSRRGCDAA+QY+EDCKLLDECE  EVEL  R+FRMQ
Sbjct: 422  VPQIRDTLWHLRVRDMLPAIWFIFSRRGCDAAIQYLEDCKLLDECEASEVELEFRRFRMQ 481

Query: 2426 YPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAAGINMPART 2247
            YPDAVREVAVKGLL G+A HHAGCLPLWK+F+EELFQRGLVKVVFATETLAAGINMPART
Sbjct: 482  YPDAVREVAVKGLLQGIAVHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPART 541

Query: 2246 SIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEECCELLFAG 2067
            +II+SLSKR+EAGR LLS NEL QMAGRAGRRGIDEVGHVVL+QTPY+GAEECC+LLFAG
Sbjct: 542  AIISSLSKRTEAGRTLLSPNELFQMAGRAGRRGIDEVGHVVLVQTPYEGAEECCDLLFAG 601

Query: 2066 LEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQSFGNYVGS 1887
            LEPLVSQFTASYGMVLNLLAG K+TRK KE D   A  SGRTLEEARKLVEQSFGNYVG+
Sbjct: 602  LEPLVSQFTASYGMVLNLLAGVKLTRKPKEPDAMKALHSGRTLEEARKLVEQSFGNYVGN 661

Query: 1886 NVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEELRAEKRLRT 1707
            NVMLAAKEEL KI++EIELLS E+ DDAVDRKC+EQL   EY EIS LQEELRAEKRLRT
Sbjct: 662  NVMLAAKEELKKIKKEIELLSSEISDDAVDRKCQEQLSMMEYAEISNLQEELRAEKRLRT 721

Query: 1706 ELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVNSFNARKIL 1527
            ELR+KMEL+RMAAWK +L+DF N  LPFMCLQYKD EAVQH VPAVYIG +  F++ KI+
Sbjct: 722  ELRRKMELKRMAAWKPILDDFKNDHLPFMCLQYKDKEAVQHIVPAVYIGKLQFFSSPKIM 781

Query: 1526 SMT----------SVYTG-VEDHNDSRPDYYVALGSDNSWYLFTEKWVKCVYRTGFPDVI 1380
            +M            V +G V D NDSRP YYVAL SDNSWYLFTEKWV+ VY+TG P+  
Sbjct: 782  NMVQSGHSVADTMEVDSGDVRDQNDSRPAYYVALSSDNSWYLFTEKWVRMVYKTGLPNAS 841

Query: 1379 SAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVLSNLSEED 1200
               G+ LPRE+L  LL+KEELQWEKLADSEFG LWCM+GSLETWSWSLNVPVLS+LSE+D
Sbjct: 842  LVDGDLLPRETLRALLVKEELQWEKLADSEFGSLWCMQGSLETWSWSLNVPVLSSLSEDD 901

Query: 1199 EVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKIERLEARS 1020
            EV+HWS  Y+DAV CY+EQR KVSRLKKK+TNTKGFKE KK+IDMTN+TKEKIE LEARS
Sbjct: 902  EVRHWSQAYQDAVECYREQRSKVSRLKKKLTNTKGFKELKKIIDMTNYTKEKIELLEARS 961

Query: 1019 NRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENELWLAMVL 840
             RL +RIEQIEP+GWKEFLQIS+VIQEARALDIN HV++PLGETA AIRGENELWLAMVL
Sbjct: 962  KRLTRRIEQIEPTGWKEFLQISQVIQEARALDINTHVIYPLGETAAAIRGENELWLAMVL 1021

Query: 839  RNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEERRSSLMQI 660
            RN+VL+DLKPAQLAAVCGSLVSEGIK+RPW++NSYIYE SS+V +VIN LEE+R+SL+QI
Sbjct: 1022 RNKVLLDLKPAQLAAVCGSLVSEGIKIRPWKSNSYIYEASSVVINVINHLEEQRNSLIQI 1081

Query: 659  QEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLSQIPKL 480
            Q++YGV+I C LDSQF GMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLL+QIPKL
Sbjct: 1082 QDRYGVQIPCELDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL 1141

Query: 479  PDIDPLLQNRASQASSVMDRAPISELAG 396
            PDIDPL+QN A  AS+VMDRAPISELAG
Sbjct: 1142 PDIDPLVQNNALLASNVMDRAPISELAG 1169


>ref|XP_008798022.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            isoform X1 [Phoenix dactylifera]
          Length = 1169

 Score = 1613 bits (4176), Expect = 0.0
 Identities = 819/1048 (78%), Positives = 913/1048 (87%), Gaps = 12/1048 (1%)
 Frame = -1

Query: 3503 EGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSVVVSAPTS 3324
            E  K +RVERLLA+VRE GE IIDF+ELASIYDF ID+FQRLAIQ+FLRGSSVVVSAPTS
Sbjct: 123  EEHKWKRVERLLAEVREFGEGIIDFEELASIYDFLIDRFQRLAIQAFLRGSSVVVSAPTS 182

Query: 3323 SGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGDSSINKDA 3144
            SGKTLI         A+GRRLFYTTPLKALSNQKFR+FR++FGENNVGLLTGDS++NKDA
Sbjct: 183  SGKTLIAEAAALATVARGRRLFYTTPLKALSNQKFRDFRRTFGENNVGLLTGDSAVNKDA 242

Query: 3143 QILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCSKE 2964
            +ILIMTTEILRNMLYQSVG+ S+  +LF VDVIVLDEVHYLSDISRGTVWEEI+IYC KE
Sbjct: 243  RILIMTTEILRNMLYQSVGMISTESRLFRVDVIVLDEVHYLSDISRGTVWEEIIIYCPKE 302

Query: 2963 VQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLLDEKGKKM 2784
            VQLICLSATVANPDELAGWIG+IHGKTELVTS +RPVPL WHFSLKNS+  LLD+KG +M
Sbjct: 303  VQLICLSATVANPDELAGWIGKIHGKTELVTSTKRPVPLNWHFSLKNSLSPLLDDKGTRM 362

Query: 2783 NRKLSINYLQSSMSRPEAYSESNKRSYKMGKPERGMNRVSSISRQA-LSKGEINSLRRTQ 2607
            NRKLS+ +LQ +  R E  + +  R  KMGK ++G   V+SIS+Q  LSK +INS+RR+Q
Sbjct: 363  NRKLSLKHLQPTAPRIEPSNGNKTRKNKMGKVQQGFG-VASISKQTPLSKNDINSIRRSQ 421

Query: 2606 VPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVELRLRKFRMQ 2427
            VPQIRDTL  L  +DMLPAIWFIFSRRGCDAAVQY+EDCKLLDECE  EVEL  ++FRMQ
Sbjct: 422  VPQIRDTLWHLRERDMLPAIWFIFSRRGCDAAVQYLEDCKLLDECEASEVELEFKRFRMQ 481

Query: 2426 YPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAAGINMPART 2247
            YPDAVREVAV+GLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATETLAAGINMPART
Sbjct: 482  YPDAVREVAVQGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPART 541

Query: 2246 SIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEECCELLFAG 2067
            +II+SL+KR+EAGR LLS NEL QMAGRAGRRGIDEVGHVVL+QTPY+GAEECCELLFAG
Sbjct: 542  AIISSLTKRTEAGRTLLSPNELFQMAGRAGRRGIDEVGHVVLVQTPYEGAEECCELLFAG 601

Query: 2066 LEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQSFGNYVGS 1887
            LEPLVSQFTASYGMVLNLLAG K+TRK KE D   A  SGRTLEEARKLVEQSFGNYVG+
Sbjct: 602  LEPLVSQFTASYGMVLNLLAGVKLTRKPKEPDAMKALHSGRTLEEARKLVEQSFGNYVGN 661

Query: 1886 NVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEELRAEKRLRT 1707
            NVMLAAKEEL KI+QEIELLS E+ DDA+DRKC+EQL  TEY EIS LQEELRAEKRLRT
Sbjct: 662  NVMLAAKEELKKIQQEIELLSSEISDDAIDRKCQEQLSMTEYAEISNLQEELRAEKRLRT 721

Query: 1706 ELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVNSFNARKIL 1527
            ELR+KMEL+RMAAWK +L+DF N  L FMCLQYKD EAVQH VPAVYIG + SF+A KI+
Sbjct: 722  ELRRKMELKRMAAWKPVLQDFENDHLSFMCLQYKDKEAVQHMVPAVYIGKLQSFSAPKIM 781

Query: 1526 SM----------TSVYTG-VEDHNDSRPDYYVALGSDNSWYLFTEKWVKCVYRTGFPDVI 1380
            +M          T   +G V D NDS P YYVAL SDNSWYLFTEKWV+ VY+TG P+  
Sbjct: 782  NMVQSGHSVADTTETDSGDVRDQNDSEPAYYVALSSDNSWYLFTEKWVRMVYKTGLPNAS 841

Query: 1379 SAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVLSNLSEED 1200
               G+ L RE+L  LLMKEELQWEKLA SEFG  WCMEGSL+TWSWSLNVP+LS+LSE+D
Sbjct: 842  LVDGDLLARETLRALLMKEELQWEKLAGSEFGSFWCMEGSLDTWSWSLNVPILSSLSEDD 901

Query: 1199 EVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKIERLEARS 1020
            EV+HWS  Y+DAV CY+EQR KVSRLKKK+TNTKGFKEFKK+IDMTN+TKEKIE LEARS
Sbjct: 902  EVRHWSQAYQDAVECYREQRGKVSRLKKKLTNTKGFKEFKKIIDMTNYTKEKIELLEARS 961

Query: 1019 NRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENELWLAMVL 840
             RL +RIEQIEP+GWKEFLQIS+VIQE RALDIN HV++PLGETA AIRGENELWLAMVL
Sbjct: 962  RRLTRRIEQIEPTGWKEFLQISQVIQEVRALDINTHVIYPLGETAAAIRGENELWLAMVL 1021

Query: 839  RNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEERRSSLMQI 660
            RN+VL+DLKP+QLAAVCGSLVSEGIK+RPW++NSYIYE SS+V DVIN LEE+R+SL+QI
Sbjct: 1022 RNKVLLDLKPSQLAAVCGSLVSEGIKIRPWKSNSYIYEASSVVIDVINHLEEQRNSLIQI 1081

Query: 659  QEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLSQIPKL 480
            Q KYGVKI C LDSQF GMVEAWASGLTWREI MDCAMDEGDLARLLRRTIDLL+QIPKL
Sbjct: 1082 QGKYGVKILCELDSQFSGMVEAWASGLTWREITMDCAMDEGDLARLLRRTIDLLAQIPKL 1141

Query: 479  PDIDPLLQNRASQASSVMDRAPISELAG 396
            PDIDPLLQN A  AS+VMDRAPI+ELAG
Sbjct: 1142 PDIDPLLQNNALLASNVMDRAPINELAG 1169


>ref|XP_008798023.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            isoform X2 [Phoenix dactylifera]
          Length = 1168

 Score = 1607 bits (4162), Expect = 0.0
 Identities = 819/1048 (78%), Positives = 912/1048 (87%), Gaps = 12/1048 (1%)
 Frame = -1

Query: 3503 EGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSVVVSAPTS 3324
            E  K +RVERLLA+VRE GE IIDF+ELASIYDF ID+FQRLAIQ+FLRGSSVVVSAPTS
Sbjct: 123  EEHKWKRVERLLAEVREFGEGIIDFEELASIYDFLIDRFQRLAIQAFLRGSSVVVSAPTS 182

Query: 3323 SGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGDSSINKDA 3144
            SGKTLI         A+GRRLFYTTPLKALSNQKFR+FR +FGENNVGLLTGDS++NKDA
Sbjct: 183  SGKTLIAEAAALATVARGRRLFYTTPLKALSNQKFRDFR-TFGENNVGLLTGDSAVNKDA 241

Query: 3143 QILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCSKE 2964
            +ILIMTTEILRNMLYQSVG+ S+  +LF VDVIVLDEVHYLSDISRGTVWEEI+IYC KE
Sbjct: 242  RILIMTTEILRNMLYQSVGMISTESRLFRVDVIVLDEVHYLSDISRGTVWEEIIIYCPKE 301

Query: 2963 VQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLLDEKGKKM 2784
            VQLICLSATVANPDELAGWIG+IHGKTELVTS +RPVPL WHFSLKNS+  LLD+KG +M
Sbjct: 302  VQLICLSATVANPDELAGWIGKIHGKTELVTSTKRPVPLNWHFSLKNSLSPLLDDKGTRM 361

Query: 2783 NRKLSINYLQSSMSRPEAYSESNKRSYKMGKPERGMNRVSSISRQA-LSKGEINSLRRTQ 2607
            NRKLS+ +LQ +  R E  + +  R  KMGK ++G   V+SIS+Q  LSK +INS+RR+Q
Sbjct: 362  NRKLSLKHLQPTAPRIEPSNGNKTRKNKMGKVQQGFG-VASISKQTPLSKNDINSIRRSQ 420

Query: 2606 VPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVELRLRKFRMQ 2427
            VPQIRDTL  L  +DMLPAIWFIFSRRGCDAAVQY+EDCKLLDECE  EVEL  ++FRMQ
Sbjct: 421  VPQIRDTLWHLRERDMLPAIWFIFSRRGCDAAVQYLEDCKLLDECEASEVELEFKRFRMQ 480

Query: 2426 YPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAAGINMPART 2247
            YPDAVREVAV+GLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATETLAAGINMPART
Sbjct: 481  YPDAVREVAVQGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPART 540

Query: 2246 SIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEECCELLFAG 2067
            +II+SL+KR+EAGR LLS NEL QMAGRAGRRGIDEVGHVVL+QTPY+GAEECCELLFAG
Sbjct: 541  AIISSLTKRTEAGRTLLSPNELFQMAGRAGRRGIDEVGHVVLVQTPYEGAEECCELLFAG 600

Query: 2066 LEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQSFGNYVGS 1887
            LEPLVSQFTASYGMVLNLLAG K+TRK KE D   A  SGRTLEEARKLVEQSFGNYVG+
Sbjct: 601  LEPLVSQFTASYGMVLNLLAGVKLTRKPKEPDAMKALHSGRTLEEARKLVEQSFGNYVGN 660

Query: 1886 NVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEELRAEKRLRT 1707
            NVMLAAKEEL KI+QEIELLS E+ DDA+DRKC+EQL  TEY EIS LQEELRAEKRLRT
Sbjct: 661  NVMLAAKEELKKIQQEIELLSSEISDDAIDRKCQEQLSMTEYAEISNLQEELRAEKRLRT 720

Query: 1706 ELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVNSFNARKIL 1527
            ELR+KMEL+RMAAWK +L+DF N  L FMCLQYKD EAVQH VPAVYIG + SF+A KI+
Sbjct: 721  ELRRKMELKRMAAWKPVLQDFENDHLSFMCLQYKDKEAVQHMVPAVYIGKLQSFSAPKIM 780

Query: 1526 SM----------TSVYTG-VEDHNDSRPDYYVALGSDNSWYLFTEKWVKCVYRTGFPDVI 1380
            +M          T   +G V D NDS P YYVAL SDNSWYLFTEKWV+ VY+TG P+  
Sbjct: 781  NMVQSGHSVADTTETDSGDVRDQNDSEPAYYVALSSDNSWYLFTEKWVRMVYKTGLPNAS 840

Query: 1379 SAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVLSNLSEED 1200
               G+ L RE+L  LLMKEELQWEKLA SEFG  WCMEGSL+TWSWSLNVP+LS+LSE+D
Sbjct: 841  LVDGDLLARETLRALLMKEELQWEKLAGSEFGSFWCMEGSLDTWSWSLNVPILSSLSEDD 900

Query: 1199 EVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKIERLEARS 1020
            EV+HWS  Y+DAV CY+EQR KVSRLKKK+TNTKGFKEFKK+IDMTN+TKEKIE LEARS
Sbjct: 901  EVRHWSQAYQDAVECYREQRGKVSRLKKKLTNTKGFKEFKKIIDMTNYTKEKIELLEARS 960

Query: 1019 NRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENELWLAMVL 840
             RL +RIEQIEP+GWKEFLQIS+VIQE RALDIN HV++PLGETA AIRGENELWLAMVL
Sbjct: 961  RRLTRRIEQIEPTGWKEFLQISQVIQEVRALDINTHVIYPLGETAAAIRGENELWLAMVL 1020

Query: 839  RNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEERRSSLMQI 660
            RN+VL+DLKP+QLAAVCGSLVSEGIK+RPW++NSYIYE SS+V DVIN LEE+R+SL+QI
Sbjct: 1021 RNKVLLDLKPSQLAAVCGSLVSEGIKIRPWKSNSYIYEASSVVIDVINHLEEQRNSLIQI 1080

Query: 659  QEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLSQIPKL 480
            Q KYGVKI C LDSQF GMVEAWASGLTWREI MDCAMDEGDLARLLRRTIDLL+QIPKL
Sbjct: 1081 QGKYGVKILCELDSQFSGMVEAWASGLTWREITMDCAMDEGDLARLLRRTIDLLAQIPKL 1140

Query: 479  PDIDPLLQNRASQASSVMDRAPISELAG 396
            PDIDPLLQN A  AS+VMDRAPI+ELAG
Sbjct: 1141 PDIDPLLQNNALLASNVMDRAPINELAG 1168


>ref|XP_009414118.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 1169

 Score = 1588 bits (4111), Expect = 0.0
 Identities = 800/1048 (76%), Positives = 913/1048 (87%), Gaps = 12/1048 (1%)
 Frame = -1

Query: 3503 EGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSVVVSAPTS 3324
            E  K +RV RLLA+VRE GE+IID++ELA IYDF IDKFQRLAIQ+FLRGSSVVVSAPTS
Sbjct: 122  EEHKWERVTRLLAEVREFGEEIIDYEELAGIYDFPIDKFQRLAIQAFLRGSSVVVSAPTS 181

Query: 3323 SGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGDSSINKDA 3144
            SGKTLI         A+GRRLFYTTPLKALSNQKFR+FR++FG+  VGLLTGDS+INK+A
Sbjct: 182  SGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRRTFGDAYVGLLTGDSAINKEA 241

Query: 3143 QILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCSKE 2964
             ILIMTTEILRNMLY+SVG+ SS  +LFHVDVIVLDEVHYLSDISRGTVWEEIVIY  KE
Sbjct: 242  PILIMTTEILRNMLYKSVGMISSASRLFHVDVIVLDEVHYLSDISRGTVWEEIVIYSPKE 301

Query: 2963 VQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLLDEKGKKM 2784
            VQLICLSATVANPDELAGWIGQIHGKTELVTS +RPVPLTWHFSLKNS++ L DEKGK+M
Sbjct: 302  VQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLTWHFSLKNSLLPLFDEKGKRM 361

Query: 2783 NRKLSINYLQSSMSRPEAYSESNKRSYKMGKPERGMNRVSSISRQA-LSKGEINSLRRTQ 2607
            NRKLS++YLQ+S+SR E ++ES  + ++MGK ERG + V+ +S+Q  LSK ++N +RR+Q
Sbjct: 362  NRKLSLDYLQTSISRGEHFNESKTKKHRMGKVERGYSNVARLSQQTPLSKNDMNYIRRSQ 421

Query: 2606 VPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVELRLRKFRMQ 2427
            VPQI+DTL  L  +DMLPAIWFIFSRRGCDAAVQY+EDCKLLDECE GEVEL  R+F+ Q
Sbjct: 422  VPQIKDTLWHLAERDMLPAIWFIFSRRGCDAAVQYLEDCKLLDECEAGEVELEYRRFKKQ 481

Query: 2426 YPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAAGINMPART 2247
            YPDAVREVAVKGLLHG+A+HHAGCLPLWK+FVEELFQRGLVKVVFATETLAAGINMPART
Sbjct: 482  YPDAVREVAVKGLLHGIASHHAGCLPLWKSFVEELFQRGLVKVVFATETLAAGINMPART 541

Query: 2246 SIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEECCELLFAG 2067
            +II+SLSK+ E GR  LS NEL QMAGRAGRRGIDEVGH VL+QTPY+GAEEC ELL AG
Sbjct: 542  AIISSLSKKGETGRTFLSPNELFQMAGRAGRRGIDEVGHAVLIQTPYEGAEECYELLSAG 601

Query: 2066 LEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQSFGNYVGS 1887
            LEPLVSQFTASYGMVLNLLAGAK+TRKL + D T  S  GRTLEEARKLVEQSFGNYVGS
Sbjct: 602  LEPLVSQFTASYGMVLNLLAGAKVTRKLHDPDGTKLSHCGRTLEEARKLVEQSFGNYVGS 661

Query: 1886 NVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEELRAEKRLRT 1707
            NVM AAKEEL KI+ EIELLS+EV +DA+DRKC+EQL E +Y EISKLQEELRAEKR RT
Sbjct: 662  NVMQAAKEELEKIQHEIELLSVEVTEDAIDRKCQEQLSENDYAEISKLQEELRAEKRTRT 721

Query: 1706 ELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVNSFNARKIL 1527
            ELR++ME++RMAAW+ LL+ FG+G LPF+CL+YKD E VQH +PAVY+G ++S + +KI+
Sbjct: 722  ELRRQMEIKRMAAWRPLLDKFGSGNLPFICLRYKDKEGVQHNIPAVYVGKLSSSSVQKIM 781

Query: 1526 SMT--------SVYTGVED---HNDSRPDYYVALGSDNSWYLFTEKWVKCVYRTGFPDVI 1380
            +M         ++ TG  D   H D +P YYVAL SDNSWYLFTEKW+K +YRTGFP++ 
Sbjct: 782  NMVKLDSSDFDNLETGSRDVASHEDGKPAYYVALSSDNSWYLFTEKWLKTIYRTGFPNIS 841

Query: 1379 SAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVLSNLSEED 1200
            S  G+ LPRE L +LL+KE+LQWEK+ADSEFG LW + GSLETWSWSLNVPVLS+LSE+D
Sbjct: 842  SLDGDILPREMLRNLLIKEDLQWEKIADSEFGSLWSIGGSLETWSWSLNVPVLSSLSEDD 901

Query: 1199 EVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKIERLEARS 1020
            EV + S  Y DAV  YKEQR +VS+LKKKITNTKGFKEFKK+IDMT F KEK+ERL ARS
Sbjct: 902  EVANQSEAYRDAVGRYKEQRSRVSQLKKKITNTKGFKEFKKIIDMTKFIKEKMERLNARS 961

Query: 1019 NRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENELWLAMVL 840
            NRL+KRI QIEP+GWKEFLQISKVIQEARALD++  V++PLGETA AIRGENELWLAM+L
Sbjct: 962  NRLSKRIGQIEPTGWKEFLQISKVIQEARALDLSTQVIYPLGETAAAIRGENELWLAMIL 1021

Query: 839  RNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEERRSSLMQI 660
            RN+VL++LKPAQLAAVCGSLVSEGIK+RPW++NSYIYEPSSIV DVI LLEE+R SL+QI
Sbjct: 1022 RNKVLLNLKPAQLAAVCGSLVSEGIKVRPWKSNSYIYEPSSIVIDVIYLLEEQRISLIQI 1081

Query: 659  QEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLSQIPKL 480
            Q+KYGVKI C LD QF GMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLL+QIPKL
Sbjct: 1082 QDKYGVKIPCELDGQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL 1141

Query: 479  PDIDPLLQNRASQASSVMDRAPISELAG 396
            PDIDPLLQN A  ASSVMDRAPI+ELAG
Sbjct: 1142 PDIDPLLQNNALLASSVMDRAPINELAG 1169


>ref|XP_010272118.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            [Nelumbo nucifera] gi|720051545|ref|XP_010272119.1|
            PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic [Nelumbo nucifera]
          Length = 1180

 Score = 1553 bits (4020), Expect = 0.0
 Identities = 788/1058 (74%), Positives = 906/1058 (85%), Gaps = 15/1058 (1%)
 Frame = -1

Query: 3524 SERFESKEGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSV 3345
            S RFE     K QRVERL ++VRE GE IID DELASIYDFRIDKFQRLAIQ+FLRGSSV
Sbjct: 126  SPRFEEH---KWQRVERLRSEVREFGEGIIDLDELASIYDFRIDKFQRLAIQAFLRGSSV 182

Query: 3344 VVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGD 3165
            VVSAPTSSGKTLI         A+GRRLFYTTPLKALSNQK+REFR++FGE+NVGLLTGD
Sbjct: 183  VVSAPTSSGKTLIAEAAAAATVARGRRLFYTTPLKALSNQKYREFRETFGESNVGLLTGD 242

Query: 3164 SSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEI 2985
            S++NKDAQ+LIMTTEILRNMLYQS+G+ SSG  LFHVDVIVLDEVHYLSDISRGTVWEEI
Sbjct: 243  SAVNKDAQVLIMTTEILRNMLYQSIGMVSSGSGLFHVDVIVLDEVHYLSDISRGTVWEEI 302

Query: 2984 VIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLL 2805
            VIYC KEVQLICLSATVANPDELAGWIGQIHG TELVTS++RPVPLTWHFS+KNS++ LL
Sbjct: 303  VIYCPKEVQLICLSATVANPDELAGWIGQIHGTTELVTSSKRPVPLTWHFSMKNSLLPLL 362

Query: 2804 DEKGKKMNRKLSINYLQSSMSRPEAYSESNKRSYKMGKPERGMNR-VSSISRQALSKGEI 2628
            +EKG  MNRKLS+NYLQ S S  E Y +   R     + E    R ++   + ALSK +I
Sbjct: 363  NEKGTSMNRKLSLNYLQFSTSGVEPYKDDKSRRRSSRRRESENYRSINMYGQSALSKNDI 422

Query: 2627 NSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVELR 2448
            N++RR+QVPQIRDTL QL ++DMLPAIWFIFSR+GCDAAVQY+EDCKLLDECE GEV+L 
Sbjct: 423  NTIRRSQVPQIRDTLWQLRARDMLPAIWFIFSRKGCDAAVQYLEDCKLLDECEMGEVQLA 482

Query: 2447 LRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAAG 2268
            L+KF +Q+PDAVRE A+KGLL GVAAHHAGCLPLWK+F+EELFQ+GLVKVVFATETLAAG
Sbjct: 483  LKKFHIQHPDAVRETAIKGLLQGVAAHHAGCLPLWKSFIEELFQQGLVKVVFATETLAAG 542

Query: 2267 INMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEEC 2088
            INMPART++I+SLSKRSEAGR  LSSNEL QMAGRAGRRGIDE GHVVL+QTPY+GAEEC
Sbjct: 543  INMPARTAVISSLSKRSEAGRIQLSSNELLQMAGRAGRRGIDERGHVVLVQTPYEGAEEC 602

Query: 2087 CELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQS 1908
            C+LLFAG++PLVSQFTASYGMVLNLLAGAKITR+LKE ++    ++GRTLEEARKLVEQS
Sbjct: 603  CKLLFAGVDPLVSQFTASYGMVLNLLAGAKITRRLKESEDMKHFQAGRTLEEARKLVEQS 662

Query: 1907 FGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEELR 1728
            FGNYVGSNVMLA+KEELTKI++EIE+L+ EV DDAVDRK R+QL    Y EIS LQEELR
Sbjct: 663  FGNYVGSNVMLASKEELTKIQKEIEVLTSEVSDDAVDRKVRKQLSAITYREISDLQEELR 722

Query: 1727 AEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVNS 1548
            AEKRLRTELRQ+ME  R+A+   LLE+  NG LPF+CLQYKD++ VQH VPAVY+G V+S
Sbjct: 723  AEKRLRTELRQRMESERIASLTPLLEELENGHLPFVCLQYKDSDGVQHLVPAVYLGKVDS 782

Query: 1547 FNARKILSM-------------TSVYTG-VEDHNDSRPDYYVALGSDNSWYLFTEKWVKC 1410
             +  ++ SM             T +++G    H D++P +YVALGSDNSWYLFTEKWVK 
Sbjct: 783  LSGSRMKSMICADDSLVQTTIRTELHSGDAGGHFDAKPSHYVALGSDNSWYLFTEKWVKT 842

Query: 1409 VYRTGFPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNV 1230
            VYRTGFP++  A G+ LPRE +  LL KEE+QWEKLA+SE G LW MEGSL+TWSWSLNV
Sbjct: 843  VYRTGFPNIPLAQGDALPREIMKALLDKEEVQWEKLANSELGGLWSMEGSLDTWSWSLNV 902

Query: 1229 PVLSNLSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTK 1050
            PVLS+LS++DEV   S  Y DAV  YKEQR +VSRLKKKI  T+GFKE++K+IDMTNF+K
Sbjct: 903  PVLSSLSDDDEVLQMSQPYHDAVELYKEQRNRVSRLKKKIARTEGFKEYQKIIDMTNFSK 962

Query: 1049 EKIERLEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRG 870
            EKIERL+AR++RL  RIEQIEPSGWKEFLQIS +I EARALDIN H++FPLGETA AIRG
Sbjct: 963  EKIERLKARADRLITRIEQIEPSGWKEFLQISNIIHEARALDINTHMIFPLGETAAAIRG 1022

Query: 869  ENELWLAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLL 690
            ENELWLAMVLRNR+L++LKPAQLAAVCGSLVS+GIK+RPW+NNSYIYEPS+ V ++I +L
Sbjct: 1023 ENELWLAMVLRNRILLELKPAQLAAVCGSLVSDGIKVRPWKNNSYIYEPSNTVINIIKIL 1082

Query: 689  EERRSSLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRT 510
            +E+RSSL+Q+QEK+GVKI C LDSQF GMVEAWASGLTWREIMMDCAMDEGDLARLLRRT
Sbjct: 1083 DEKRSSLLQLQEKHGVKIPCELDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRT 1142

Query: 509  IDLLSQIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            IDLL+QIPKLPDIDP+LQN A  AS+VMDR PISELAG
Sbjct: 1143 IDLLAQIPKLPDIDPVLQNNAMVASNVMDRPPISELAG 1180


>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            [Vitis vinifera]
          Length = 1174

 Score = 1530 bits (3961), Expect = 0.0
 Identities = 773/1052 (73%), Positives = 893/1052 (84%), Gaps = 19/1052 (1%)
 Frame = -1

Query: 3494 KLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSVVVSAPTSSGK 3315
            K QRVE+L  +VRE GE++ID +ELASIYDFRIDKFQRLAIQ+FLRGSSVVVSAPTSSGK
Sbjct: 125  KWQRVEKLCNEVREFGEELIDVEELASIYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGK 184

Query: 3314 TLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGDSSINKDAQIL 3135
            TLI         ++GRRLFYTTPLKALSNQKFREFR++FG+NNVGLLTGDS++NKDAQ+L
Sbjct: 185  TLIAEAAAVATVSRGRRLFYTTPLKALSNQKFREFRETFGDNNVGLLTGDSAVNKDAQVL 244

Query: 3134 IMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCSKEVQL 2955
            IMTTEILRNMLYQSVG+ SSG  LFHVDVIVLDEVHYLSDI RGTVWEEIVIYC KEVQL
Sbjct: 245  IMTTEILRNMLYQSVGMVSSGSGLFHVDVIVLDEVHYLSDIYRGTVWEEIVIYCPKEVQL 304

Query: 2954 ICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLLDEKGKKMNRK 2775
            ICLSATVANPDELAGWI QIHGKTELVTS++RPVPLTWHFS K S++ LLDEKGK MNRK
Sbjct: 305  ICLSATVANPDELAGWISQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEKGKSMNRK 364

Query: 2774 LSINYLQSSMSRPEAYSESNKRSYKMGKPERGMNRVSSIS---RQALSKGEINSLRRTQV 2604
            LS++YLQ+  S   +Y +   R   + K E  M+  S  S   + +LSK +IN++RR+QV
Sbjct: 365  LSLSYLQNYASGDNSYKDERSRRRNLKKRESDMSYSSFASIHGQSSLSKNDINTIRRSQV 424

Query: 2603 PQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVELRLRKFRMQY 2424
            PQ+ DTL  L ++DMLPAIWFIFSR+GCDA+VQY+EDC LLDE E  EV+L L++FR+QY
Sbjct: 425  PQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLALKRFRLQY 484

Query: 2423 PDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAAGINMPARTS 2244
            PDAVRE AVKGLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATETLAAGINMPART+
Sbjct: 485  PDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTA 544

Query: 2243 IIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEECCELLFAGL 2064
            +I+SLSKR E+GR  LSSNEL QMAGRAGRRGIDE GH VL+QTPYDGAEECC+LLFAG+
Sbjct: 545  VISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHAVLVQTPYDGAEECCKLLFAGV 604

Query: 2063 EPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQSFGNYVGSN 1884
            EPLVSQFTASYGMVLNLLAGAK+TR+L E ++    ++GRTLEEARKLVEQSFGNYVGSN
Sbjct: 605  EPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQSFGNYVGSN 664

Query: 1883 VMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEELRAEKRLRTE 1704
            VMLAAKEELTK+ +EIE+LS EV DDA+DRK R+ L E  Y+EI+ LQEELRAEKRLRTE
Sbjct: 665  VMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELRAEKRLRTE 724

Query: 1703 LRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVNSFNARKILS 1524
            LR++MELRRM+A K LL++  NG LPF+CLQYKD+E VQH VPAVY+G V+SF+  K+ +
Sbjct: 725  LRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDSFDGSKVKN 784

Query: 1523 MTSVYTG----------------VEDHNDSRPDYYVALGSDNSWYLFTEKWVKCVYRTGF 1392
            M  VYT                  +   + +P YYVALGSDNSWYLFTEKW+K VYRTGF
Sbjct: 785  M--VYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSDNSWYLFTEKWIKTVYRTGF 842

Query: 1391 PDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVLSNL 1212
            P+V  A G+ LPRE +  LL K ++QWE+LA SE G LWC+EGSLETWSWSLNVPVLS+L
Sbjct: 843  PNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCIEGSLETWSWSLNVPVLSSL 902

Query: 1211 SEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKIERL 1032
            SE+DEV   S  Y +AV CYKEQR KVSRLKKKI  T+GFKE+KK+IDM+ FT+EKI+RL
Sbjct: 903  SEDDEVLKMSQAYYEAVECYKEQRNKVSRLKKKIARTEGFKEYKKIIDMSKFTEEKIKRL 962

Query: 1031 EARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENELWL 852
            +ARSNRL+ RIEQIEPSGWKEFLQ+S VI E RALDIN H++FPLGETA AIRGENELWL
Sbjct: 963  KARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAAAIRGENELWL 1022

Query: 851  AMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEERRSS 672
            AMVLR++VL+ LKPAQLAAVCGSLVSEGIK+RPW+NNSYIYE S+ V +VI+LL+E+R+S
Sbjct: 1023 AMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINVISLLDEQRNS 1082

Query: 671  LMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLSQ 492
            L+Q+QEK+ V+I C LDSQF GMVEAWASGLTWREIMMDCAMDEGDLARLLRRTID+L+Q
Sbjct: 1083 LLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDILAQ 1142

Query: 491  IPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            IPKLPDIDPLLQ+ A  AS+VMDR PISELAG
Sbjct: 1143 IPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1174


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score = 1530 bits (3961), Expect = 0.0
 Identities = 773/1052 (73%), Positives = 893/1052 (84%), Gaps = 19/1052 (1%)
 Frame = -1

Query: 3494 KLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSVVVSAPTSSGK 3315
            K QRVE+L  +VRE GE++ID +ELASIYDFRIDKFQRLAIQ+FLRGSSVVVSAPTSSGK
Sbjct: 15   KWQRVEKLCNEVREFGEELIDVEELASIYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGK 74

Query: 3314 TLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGDSSINKDAQIL 3135
            TLI         ++GRRLFYTTPLKALSNQKFREFR++FG+NNVGLLTGDS++NKDAQ+L
Sbjct: 75   TLIAEAAAVATVSRGRRLFYTTPLKALSNQKFREFRETFGDNNVGLLTGDSAVNKDAQVL 134

Query: 3134 IMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCSKEVQL 2955
            IMTTEILRNMLYQSVG+ SSG  LFHVDVIVLDEVHYLSDI RGTVWEEIVIYC KEVQL
Sbjct: 135  IMTTEILRNMLYQSVGMVSSGSGLFHVDVIVLDEVHYLSDIYRGTVWEEIVIYCPKEVQL 194

Query: 2954 ICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLLDEKGKKMNRK 2775
            ICLSATVANPDELAGWI QIHGKTELVTS++RPVPLTWHFS K S++ LLDEKGK MNRK
Sbjct: 195  ICLSATVANPDELAGWISQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEKGKSMNRK 254

Query: 2774 LSINYLQSSMSRPEAYSESNKRSYKMGKPERGMNRVSSIS---RQALSKGEINSLRRTQV 2604
            LS++YLQ+  S   +Y +   R   + K E  M+  S  S   + +LSK +IN++RR+QV
Sbjct: 255  LSLSYLQNYASGDNSYKDERSRRRNLKKRESDMSYSSFASIHGQSSLSKNDINTIRRSQV 314

Query: 2603 PQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVELRLRKFRMQY 2424
            PQ+ DTL  L ++DMLPAIWFIFSR+GCDA+VQY+EDC LLDE E  EV+L L++FR+QY
Sbjct: 315  PQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLALKRFRLQY 374

Query: 2423 PDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAAGINMPARTS 2244
            PDAVRE AVKGLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATETLAAGINMPART+
Sbjct: 375  PDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTA 434

Query: 2243 IIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEECCELLFAGL 2064
            +I+SLSKR E+GR  LSSNEL QMAGRAGRRGIDE GH VL+QTPYDGAEECC+LLFAG+
Sbjct: 435  VISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHAVLVQTPYDGAEECCKLLFAGV 494

Query: 2063 EPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQSFGNYVGSN 1884
            EPLVSQFTASYGMVLNLLAGAK+TR+L E ++    ++GRTLEEARKLVEQSFGNYVGSN
Sbjct: 495  EPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQSFGNYVGSN 554

Query: 1883 VMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEELRAEKRLRTE 1704
            VMLAAKEELTK+ +EIE+LS EV DDA+DRK R+ L E  Y+EI+ LQEELRAEKRLRTE
Sbjct: 555  VMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELRAEKRLRTE 614

Query: 1703 LRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVNSFNARKILS 1524
            LR++MELRRM+A K LL++  NG LPF+CLQYKD+E VQH VPAVY+G V+SF+  K+ +
Sbjct: 615  LRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDSFDGSKVKN 674

Query: 1523 MTSVYTG----------------VEDHNDSRPDYYVALGSDNSWYLFTEKWVKCVYRTGF 1392
            M  VYT                  +   + +P YYVALGSDNSWYLFTEKW+K VYRTGF
Sbjct: 675  M--VYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSDNSWYLFTEKWIKTVYRTGF 732

Query: 1391 PDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVLSNL 1212
            P+V  A G+ LPRE +  LL K ++QWE+LA SE G LWC+EGSLETWSWSLNVPVLS+L
Sbjct: 733  PNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCIEGSLETWSWSLNVPVLSSL 792

Query: 1211 SEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKIERL 1032
            SE+DEV   S  Y +AV CYKEQR KVSRLKKKI  T+GFKE+KK+IDM+ FT+EKI+RL
Sbjct: 793  SEDDEVLKMSQAYYEAVECYKEQRNKVSRLKKKIARTEGFKEYKKIIDMSKFTEEKIKRL 852

Query: 1031 EARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENELWL 852
            +ARSNRL+ RIEQIEPSGWKEFLQ+S VI E RALDIN H++FPLGETA AIRGENELWL
Sbjct: 853  KARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAAAIRGENELWL 912

Query: 851  AMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEERRSS 672
            AMVLR++VL+ LKPAQLAAVCGSLVSEGIK+RPW+NNSYIYE S+ V +VI+LL+E+R+S
Sbjct: 913  AMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINVISLLDEQRNS 972

Query: 671  LMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLSQ 492
            L+Q+QEK+ V+I C LDSQF GMVEAWASGLTWREIMMDCAMDEGDLARLLRRTID+L+Q
Sbjct: 973  LLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDILAQ 1032

Query: 491  IPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            IPKLPDIDPLLQ+ A  AS+VMDR PISELAG
Sbjct: 1033 IPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1064


>ref|XP_006647863.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Oryza brachyantha]
          Length = 1182

 Score = 1519 bits (3933), Expect = 0.0
 Identities = 760/1055 (72%), Positives = 900/1055 (85%), Gaps = 9/1055 (0%)
 Frame = -1

Query: 3533 QSLSERFESKEGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRG 3354
            +S + R +S+E  K QRV +L+A+VRE GEDIID++ELA IYDFRIDKFQRLAIQ+FLRG
Sbjct: 129  ESAARRRKSEEY-KYQRVGKLVAEVREFGEDIIDYNELAGIYDFRIDKFQRLAIQAFLRG 187

Query: 3353 SSVVVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLL 3174
            SSVVVSAPTSSGKTLI         A+GRRLFYTTPLKALSNQKFR+FR +FG++NVGLL
Sbjct: 188  SSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHNVGLL 247

Query: 3173 TGDSSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVW 2994
            TGDS+INKDAQILIMTTEILRNMLYQSVG+T+S G+LF VDVIVLDEVHYLSDISRGTVW
Sbjct: 248  TGDSAINKDAQILIMTTEILRNMLYQSVGMTASEGRLFQVDVIVLDEVHYLSDISRGTVW 307

Query: 2993 EEIVIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMV 2814
            EE VIYC KEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFS K ++V
Sbjct: 308  EETVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSKKYALV 367

Query: 2813 RLLDEKGKKMNRKLSINYLQS-SMSRPEAYSESNKRSYKMGKPERGMNRVSSISRQA-LS 2640
             LLD KGKKMNRKL +++ Q+ S  + E Y    KR  +  K E+G      IS+Q  LS
Sbjct: 368  PLLDGKGKKMNRKLRMSHFQNLSSPKSEYYYVKGKRKLRTNKNEQGNRSPLDISKQVQLS 427

Query: 2639 KGEINSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGE 2460
            K E+ ++RR+QVP IRDTL QL   DMLPAIWFIFSRRGCDAAV+Y+EDC+LL +CE  E
Sbjct: 428  KHELTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCEASE 487

Query: 2459 VELRLRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATET 2280
            VEL L++FR+QYPDA+RE AVKGLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATET
Sbjct: 488  VELELKRFRLQYPDAIRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 547

Query: 2279 LAAGINMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDG 2100
            LAAGINMPART++I+SLSKR +AGR LL+ NEL QMAGRAGRRGID +GH VL+QT Y+G
Sbjct: 548  LAAGINMPARTAVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTIGHSVLVQTTYEG 607

Query: 2099 AEECCELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKL 1920
             E+CC+++FAGLEPLVSQFTASYGMVLNLLAG+K+T   KE D+    RSGRTLEEARKL
Sbjct: 608  PEDCCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDVKVKRSGRTLEEARKL 667

Query: 1919 VEQSFGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQ 1740
            VEQSFGNYVGSNVM+AAKEEL +I+ EI+ LS E+ D++VD+KCRE+L E +Y EIS LQ
Sbjct: 668  VEQSFGNYVGSNVMVAAKEELERIQNEIQYLSSEITDESVDQKCREELSEEDYTEISLLQ 727

Query: 1739 EELRAEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIG 1560
            ++L+ EK++R EL+++MEL RMAAWK  LE+F +G LPFMCLQYKD ++VQHT+PAV+IG
Sbjct: 728  KKLKEEKQMRNELKKRMELERMAAWKIRLEEFESGHLPFMCLQYKDKDSVQHTIPAVFIG 787

Query: 1559 NVNSFNARKILSMT---SVYTGVE----DHNDSRPDYYVALGSDNSWYLFTEKWVKCVYR 1401
            +++SF  +KILS+    S+  G +    +     P YYVAL SDNSWYLFTEKW+K VYR
Sbjct: 788  SLSSFADQKILSLVEGDSLVAGKQKVDSEGQQYYPSYYVALSSDNSWYLFTEKWIKAVYR 847

Query: 1400 TGFPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVL 1221
            TG P V SA G+ LPRE+L  LL++E++ W+K+A SE+G L CM+GSL+TWSWSLNVPVL
Sbjct: 848  TGLPSVPSAEGDPLPRETLKQLLLREDMVWDKIAKSEYGSLLCMDGSLDTWSWSLNVPVL 907

Query: 1220 SNLSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKI 1041
            ++LSE+DEV+ +S E++DAV CYK+QRRKVS+LKK I +TKGFKEF+K+IDM NFTKEKI
Sbjct: 908  NSLSEDDEVERFSHEHQDAVECYKQQRRKVSQLKKTIRSTKGFKEFQKIIDMRNFTKEKI 967

Query: 1040 ERLEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENE 861
            ERLEARS RL +RI QIEP+GWKEFLQISK+IQEARALDIN  V++PLGETA AIRGENE
Sbjct: 968  ERLEARSRRLTRRIRQIEPTGWKEFLQISKIIQEARALDINTQVIYPLGETAAAIRGENE 1027

Query: 860  LWLAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEER 681
            LWLAMVLRN++L+DLKP+QLAA+CGSLVSEGIKLRPW+N+SY+YEPSS+V  VIN LEE+
Sbjct: 1028 LWLAMVLRNKILLDLKPSQLAAICGSLVSEGIKLRPWKNSSYVYEPSSVVTGVINYLEEQ 1087

Query: 680  RSSLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDL 501
            R+SL+ +QEK+GVKI C +D+QF GMVEAWASGLTWREIMMD AMD+GDLARLLRRTIDL
Sbjct: 1088 RNSLVDLQEKHGVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRTIDL 1147

Query: 500  LSQIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            L+QIPKLPDIDP+LQ  A  A ++MDR PISELAG
Sbjct: 1148 LAQIPKLPDIDPVLQKNAQIACNIMDRVPISELAG 1182


>ref|NP_001048065.1| Os02g0739000 [Oryza sativa Japonica Group]
            gi|46390556|dbj|BAD16042.1| putative helicase [Oryza
            sativa Japonica Group] gi|113537596|dbj|BAF09979.1|
            Os02g0739000 [Oryza sativa Japonica Group]
            gi|215704690|dbj|BAG94318.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|937905777|dbj|BAS80831.1| Os02g0739000 [Oryza sativa
            Japonica Group]
          Length = 1179

 Score = 1510 bits (3909), Expect = 0.0
 Identities = 755/1058 (71%), Positives = 892/1058 (84%), Gaps = 9/1058 (0%)
 Frame = -1

Query: 3542 GGHQSLSERFESKEGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSF 3363
            GG +  + R    E  K QRV +L+A+VRE GEDIID++ELA IYDF IDKFQRLAIQ+F
Sbjct: 122  GGREGTAARRRRSEEYKSQRVGKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQAF 181

Query: 3362 LRGSSVVVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNV 3183
            LRGSSVVVSAPTSSGKTLI         A+GRRLFYTTPLKALSNQKFR+FR +FG++NV
Sbjct: 182  LRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHNV 241

Query: 3182 GLLTGDSSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRG 3003
            GLLTGDS+INKDAQILIMTTEILRNMLYQSVG+ +S G+LF VDVIVLDEVHYLSDISRG
Sbjct: 242  GLLTGDSAINKDAQILIMTTEILRNMLYQSVGMAASEGRLFQVDVIVLDEVHYLSDISRG 301

Query: 3002 TVWEEIVIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKN 2823
            TVWEE VIYC KEVQLICLSATVANPDELAGWIGQIHGKTELVTS++RPVPLTWHFS K 
Sbjct: 302  TVWEETVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSHKRPVPLTWHFSKKF 361

Query: 2822 SMVRLLDEKGKKMNRKLSINYLQS-SMSRPEAYSESNKRSYKMGKPERGMNRVSSISRQA 2646
            ++V LLD KGKKMNRKL +++ Q+ S  + E Y    KR  +  K E+G      IS+Q 
Sbjct: 362  ALVPLLDGKGKKMNRKLRMSHFQNLSSPKSEFYYVKGKRKLRTTKNEQGNRSPLDISKQV 421

Query: 2645 -LSKGEINSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECE 2469
             LSK E+ ++RR+QVP IRDTL QL   DMLPAIWFIFSRRGCDAAV+Y+EDC+LL +CE
Sbjct: 422  QLSKHELTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCE 481

Query: 2468 TGEVELRLRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFA 2289
              EVEL L++FRMQYPDA+RE AVKGLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFA
Sbjct: 482  ASEVELELKRFRMQYPDAIRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFA 541

Query: 2288 TETLAAGINMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTP 2109
            TETLAAGINMPARTS+I+SLSKR +AGR LL+ NEL QMAGRAGRRGID VGH VL+QT 
Sbjct: 542  TETLAAGINMPARTSVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHSVLVQTT 601

Query: 2108 YDGAEECCELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEA 1929
            Y+G EECC+++FAGLEPLVSQFTASYGMVLNLLAG+K+T   KE D+    RSGRTLEEA
Sbjct: 602  YEGPEECCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDIKVKRSGRTLEEA 661

Query: 1928 RKLVEQSFGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEIS 1749
            RKLVEQSFGNYVGSNVM+AAKEEL +I+ EI+ LS E+ D+++DRKCRE+L E +Y EIS
Sbjct: 662  RKLVEQSFGNYVGSNVMVAAKEELERIQSEIQYLSSEITDESIDRKCREELSEEDYAEIS 721

Query: 1748 KLQEELRAEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAV 1569
             LQ++L+ EK++R EL+++MEL RM AWK+ LE+F +G LPFMCLQYKD ++VQHT+PAV
Sbjct: 722  LLQKKLKEEKQMRNELKKRMELERMVAWKTRLEEFESGHLPFMCLQYKDKDSVQHTIPAV 781

Query: 1568 YIGNVNSFNARKILSMTSVYTGV-------EDHNDSRPDYYVALGSDNSWYLFTEKWVKC 1410
            +IG+++SF  +KI+S+    + V        +     P YYVAL SDNSWYLFTEKW+K 
Sbjct: 782  FIGSLSSFADQKIVSLVENDSPVAGKQKVDNEGQQYYPSYYVALSSDNSWYLFTEKWIKA 841

Query: 1409 VYRTGFPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNV 1230
            VY+TG P V SA G  LPRE+L  LL++E++ W+K+A SE+G L CM+GSL+TWSWSLNV
Sbjct: 842  VYKTGLPAVPSAEGGPLPRETLKQLLLREDMMWDKIAKSEYGSLLCMDGSLDTWSWSLNV 901

Query: 1229 PVLSNLSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTK 1050
            PVL++LSE+DEV+ +S E++DAV C+K+QR+KVS+LKK I +TKGFKEF+K+IDM NFTK
Sbjct: 902  PVLNSLSEDDEVERFSQEHQDAVECHKQQRKKVSQLKKTIRSTKGFKEFQKIIDMRNFTK 961

Query: 1049 EKIERLEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRG 870
            EKIERLEARS RL +RI QIEP+GWKEFLQISKVIQEARALDIN  V++PLGETA AIRG
Sbjct: 962  EKIERLEARSRRLTRRIRQIEPTGWKEFLQISKVIQEARALDINTQVIYPLGETAAAIRG 1021

Query: 869  ENELWLAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLL 690
            ENELWLAMVLRN+VL+DLKP+QLAA+CGSLVSEGIKLRPW+N+SY+YEPSS+V  VIN L
Sbjct: 1022 ENELWLAMVLRNKVLLDLKPSQLAAICGSLVSEGIKLRPWKNSSYVYEPSSVVTGVINYL 1081

Query: 689  EERRSSLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRT 510
            EE+R+SL+ +QEK+ VKI C +D+QF GMVEAWASGLTWREIMMD AMD+GDLARLLRRT
Sbjct: 1082 EEQRNSLVDLQEKHSVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRT 1141

Query: 509  IDLLSQIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            IDLL+QIPKLPDIDP+LQ  A  A ++MDR PISELAG
Sbjct: 1142 IDLLAQIPKLPDIDPVLQKNAQIACNIMDRVPISELAG 1179


>ref|XP_002454314.1| hypothetical protein SORBIDRAFT_04g028500 [Sorghum bicolor]
            gi|241934145|gb|EES07290.1| hypothetical protein
            SORBIDRAFT_04g028500 [Sorghum bicolor]
          Length = 1173

 Score = 1509 bits (3907), Expect = 0.0
 Identities = 763/1053 (72%), Positives = 893/1053 (84%), Gaps = 10/1053 (0%)
 Frame = -1

Query: 3524 SERFESKEGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSV 3345
            + R ES+E  K +RV +L+A+VRE GEDIID++ELA IYDF IDKFQRLAIQ+FLRGSSV
Sbjct: 122  ARRRESEEY-KSRRVVKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQAFLRGSSV 180

Query: 3344 VVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGD 3165
            VVSAPTSSGKTLI         A+GRRLFYTTPLKALSNQKFR+FR +FG++NVGLLTGD
Sbjct: 181  VVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRDTFGDHNVGLLTGD 240

Query: 3164 SSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEI 2985
            S+INKDAQILIMTTEILRNMLYQSVG+T+S G+LF VDVIVLDEVHYLSDISRGTVWEE 
Sbjct: 241  SAINKDAQILIMTTEILRNMLYQSVGMTASEGRLFQVDVIVLDEVHYLSDISRGTVWEET 300

Query: 2984 VIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLL 2805
            VIYC KEVQLICLSATVANPDELAGWI QIHGKTELVTSN+RPVPLTWHFS K S+  LL
Sbjct: 301  VIYCPKEVQLICLSATVANPDELAGWISQIHGKTELVTSNKRPVPLTWHFSKKYSLQPLL 360

Query: 2804 DEKGKKMNRKLSINYLQSSMS-RPEAYSESNKRSYKMGKPERGMNRVSSISRQA-LSKGE 2631
            D KGKKMNRKL ++  Q+  S + E Y    KR ++  K E+G +    IS+Q  LSK E
Sbjct: 361  DGKGKKMNRKLRMSNFQNLASPKSEFYYVKGKRRFRTNKIEQGNSSSFDISKQVQLSKHE 420

Query: 2630 INSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVEL 2451
            ++++RR+QVP IRDTL QL   DMLPAIWFIFSRRGCDAAV+Y+EDC+LL +CE  EVEL
Sbjct: 421  LSNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCEASEVEL 480

Query: 2450 RLRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAA 2271
             LR+F+MQYPDAVRE AVKGLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATETLAA
Sbjct: 481  ELRRFKMQYPDAVRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAA 540

Query: 2270 GINMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEE 2091
            GINMPART++I+SLSKR +AGR LL+ NEL QMAGRAGRRGID VGH VL+QTPY+G EE
Sbjct: 541  GINMPARTAVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHTVLVQTPYEGPEE 600

Query: 2090 CCELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETN-ASRSGRTLEEARKLVE 1914
            CC+++FAGLEPLVSQFTASYGMVLNLLAG+K+T   KE D+ N   RSGRTLEEARKLVE
Sbjct: 601  CCDIIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDVNKVKRSGRTLEEARKLVE 660

Query: 1913 QSFGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEE 1734
            QSFGNYVGSNVM+AAKEE+ +I+QEI+ LS E+ D++ DRKCRE+L E +Y EIS LQ+ 
Sbjct: 661  QSFGNYVGSNVMVAAKEEIERIQQEIQYLSSEITDESTDRKCREELSEEDYAEISLLQKR 720

Query: 1733 LRAEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNV 1554
            L+ EK++R EL++KMEL RMAAWK+ LE+F NG LPFMCLQYKD +++QHT+PAV+IGN+
Sbjct: 721  LKEEKQIRNELKKKMELERMAAWKNRLEEFENGHLPFMCLQYKDKDSIQHTIPAVFIGNL 780

Query: 1553 NSFNARKILSMT---SVYTGVEDHNDSR----PDYYVALGSDNSWYLFTEKWVKCVYRTG 1395
            NSF  +KI +M    S+ +G +  +       P YYVAL SDNSWYLFTEKW+K VY+TG
Sbjct: 781  NSFADQKITNMVEDDSLVSGKQKLDSGEQLYCPSYYVALSSDNSWYLFTEKWIKTVYKTG 840

Query: 1394 FPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVLSN 1215
             P V S  G  LPRE+L  LL++EEL W+K+A SE+G L  M+GSL+TWSWSLNVPVL++
Sbjct: 841  LPAVASIEGGALPRETLKQLLLREELMWDKVAKSEYGSLLSMDGSLDTWSWSLNVPVLNS 900

Query: 1214 LSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKIER 1035
            LSE+DEV+ +S E+ DAV CYK+QRRKVS LKK I +TKGFKEF+K+ID+ NFTKEKIER
Sbjct: 901  LSEDDEVERFSQEHRDAVECYKQQRRKVSHLKKTIRSTKGFKEFQKIIDIRNFTKEKIER 960

Query: 1034 LEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENELW 855
            LEARS RL +RI QIEP+GWKEFLQISKVIQEARALDIN  V++PLGETA AIRGENELW
Sbjct: 961  LEARSRRLTRRIRQIEPTGWKEFLQISKVIQEARALDINTQVIYPLGETAAAIRGENELW 1020

Query: 854  LAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEERRS 675
            LAMVLRN+VL+DLKP+QLAAVCGSLVSEGIK RPW+N+SY+YEPSS+V  VI+ LEE+R+
Sbjct: 1021 LAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKFRPWKNSSYVYEPSSVVIGVISYLEEQRN 1080

Query: 674  SLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLS 495
            SL+ +QE++GVKI C +D+QF GMVEAWASGLTWREIMMD AMD+GDLARLLRR+IDLL+
Sbjct: 1081 SLIDLQERHGVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRSIDLLA 1140

Query: 494  QIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            QIPKLPDIDP+LQ  A  A SVMDR PISELAG
Sbjct: 1141 QIPKLPDIDPVLQKNAQIACSVMDRVPISELAG 1173


>ref|XP_004953907.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            [Setaria italica] gi|944267202|gb|KQL31442.1|
            hypothetical protein SETIT_016137mg [Setaria italica]
          Length = 1174

 Score = 1508 bits (3905), Expect = 0.0
 Identities = 760/1058 (71%), Positives = 889/1058 (84%), Gaps = 9/1058 (0%)
 Frame = -1

Query: 3542 GGHQSLSERFESKEGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSF 3363
            G  +  S R    E  K +RV +L+A+VRE GEDIID++ELA IYDF IDKFQRLAIQ+F
Sbjct: 117  GEREDTSVRRRESEEYKSRRVAKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQAF 176

Query: 3362 LRGSSVVVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNV 3183
            LRGSSVVVSAPTSSGKTLI         A+GRRLFYTTPLKALSNQKFR+FR +FG++NV
Sbjct: 177  LRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHNV 236

Query: 3182 GLLTGDSSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRG 3003
            GLLTGDS+INKDAQILIMTTEILRNMLYQSVG+T+S G+LF VDVIVLDEVHYLSDISRG
Sbjct: 237  GLLTGDSAINKDAQILIMTTEILRNMLYQSVGMTASEGRLFQVDVIVLDEVHYLSDISRG 296

Query: 3002 TVWEEIVIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKN 2823
            TVWEE VIYC KEVQLICLSATVANPDELAGWI QIHGKTELVTSN+RPVPLTWHFS K 
Sbjct: 297  TVWEETVIYCPKEVQLICLSATVANPDELAGWISQIHGKTELVTSNKRPVPLTWHFSKKY 356

Query: 2822 SMVRLLDEKGKKMNRKLSINYLQSSMS-RPEAYSESNKRSYKMGKPERGMNRVSSISRQA 2646
            ++  LLD KGKKMNRKL ++  Q+  S + + Y    KR  +  K E+G      IS+Q 
Sbjct: 357  ALQPLLDGKGKKMNRKLRMSNFQNLASPKNDFYYVKGKRRLRANKNEQGNRSPLDISKQV 416

Query: 2645 -LSKGEINSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECE 2469
             LSK E++++RR+QVP IRDTL QL   DMLPAIWFIFSRRGCDAAV+Y+EDC+LL +CE
Sbjct: 417  QLSKHELSNMRRSQVPLIRDTLSQLWESDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCE 476

Query: 2468 TGEVELRLRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFA 2289
              EVEL LR+F+MQYPDAVRE AVKGLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFA
Sbjct: 477  ASEVELELRRFKMQYPDAVRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFA 536

Query: 2288 TETLAAGINMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTP 2109
            TETLAAGINMPART++I+SLSKR +AGR LL+ NEL QMAGRAGRRGID VGH VL+QTP
Sbjct: 537  TETLAAGINMPARTAVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHAVLVQTP 596

Query: 2108 YDGAEECCELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEA 1929
            Y+G EECC+++FAGLEPLVSQFTASYGMVLNLLAG+K+T   KE D+    RSGRTLEEA
Sbjct: 597  YEGPEECCDIIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDLKVKRSGRTLEEA 656

Query: 1928 RKLVEQSFGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEIS 1749
            RKLVEQSFGNYVGSNVM+AAKEE+ +I+QEI+ LS E+ D+++DRKCRE+L E +Y EIS
Sbjct: 657  RKLVEQSFGNYVGSNVMVAAKEEIERIQQEIQYLSSEITDESIDRKCREELSEEDYAEIS 716

Query: 1748 KLQEELRAEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAV 1569
             LQ+ L+ EK++R EL+++MEL RMAAWK+ LE+F +G LPFMCLQYKD ++V HT+PAV
Sbjct: 717  LLQKRLKEEKQIRNELKKRMELERMAAWKNRLEEFESGHLPFMCLQYKDKDSVHHTIPAV 776

Query: 1568 YIGNVNSFNARKILSMT---SVYTGVEDHNDSR----PDYYVALGSDNSWYLFTEKWVKC 1410
            +IGN+NSF  +KI +M    S+ +G    +       P YYVAL SDNSWYLFTEKW+K 
Sbjct: 777  FIGNLNSFADQKIANMVEEDSLGSGKHKADTGEQLYCPSYYVALSSDNSWYLFTEKWIKT 836

Query: 1409 VYRTGFPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNV 1230
            VY+TG P V S  G  LPRE+L  LL++EE+ W+KLA SE+G L  M+GSL+TWSWSLNV
Sbjct: 837  VYKTGLPAVPSVEGGTLPRETLKQLLLREEMMWDKLAKSEYGSLLSMDGSLDTWSWSLNV 896

Query: 1229 PVLSNLSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTK 1050
            PVL++LSE+DEV+ +S E++DAV CYK+QRRKVS LKK I +TKGFKEF+K+IDM NFTK
Sbjct: 897  PVLNSLSEDDEVERFSQEHQDAVECYKQQRRKVSHLKKTIKSTKGFKEFQKIIDMRNFTK 956

Query: 1049 EKIERLEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRG 870
            EKIERLEARS RL +RI+QIEP+GWKEFLQISKVIQEARALDIN  V++PLGETA AIRG
Sbjct: 957  EKIERLEARSRRLTRRIKQIEPTGWKEFLQISKVIQEARALDINTQVIYPLGETAAAIRG 1016

Query: 869  ENELWLAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLL 690
            ENELWLAMVLRN+VL+DLKP+QLAAVCGSLVSEGIKLRPW+N+SY+YEPSS+   VI+ L
Sbjct: 1017 ENELWLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVATGVISYL 1076

Query: 689  EERRSSLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRT 510
            EE+R+SL+ +QEK+ VKI C +D+QF GMVEAWASGLTWREIMMD AMD+GDLARLLRRT
Sbjct: 1077 EEQRNSLIDLQEKHNVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRT 1136

Query: 509  IDLLSQIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            IDLL+QIPKLPDIDP+LQ  A  A SVMDR PISELAG
Sbjct: 1137 IDLLAQIPKLPDIDPVLQKNAQIACSVMDRVPISELAG 1174


>ref|XP_008646222.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            isoform X1 [Zea mays] gi|670410121|ref|XP_008646223.1|
            PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic isoform X1 [Zea mays]
            gi|670410123|ref|XP_008646224.1| PREDICTED: DEAD-box
            ATP-dependent RNA helicase ISE2, chloroplastic isoform X1
            [Zea mays]
          Length = 1175

 Score = 1507 bits (3902), Expect = 0.0
 Identities = 757/1055 (71%), Positives = 890/1055 (84%), Gaps = 9/1055 (0%)
 Frame = -1

Query: 3533 QSLSERFESKEGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRG 3354
            +  + R    E  K +RV +L+A+VRE GED+ID++ELA IYDF IDKFQRLAIQ+FLRG
Sbjct: 121  EDTAARRRDSEEYKSRRVAKLVAEVREFGEDVIDYNELAGIYDFPIDKFQRLAIQAFLRG 180

Query: 3353 SSVVVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLL 3174
            SSVVVSAPTSSGKTLI         A+GRRLFYTTPLKALSNQKFR+FR +FG++NVGLL
Sbjct: 181  SSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHNVGLL 240

Query: 3173 TGDSSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVW 2994
            TGDS+INKDAQILIMTTEILRNMLYQSVG+T+S G+LF VDVIVLDEVHYLSDISRGTVW
Sbjct: 241  TGDSAINKDAQILIMTTEILRNMLYQSVGMTASEGRLFQVDVIVLDEVHYLSDISRGTVW 300

Query: 2993 EEIVIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMV 2814
            EE VIYC KEVQLICLSATVANPDELAGWI QIHGKTELVTSN+RPVPLTWHFS K S+ 
Sbjct: 301  EETVIYCPKEVQLICLSATVANPDELAGWISQIHGKTELVTSNKRPVPLTWHFSKKYSLQ 360

Query: 2813 RLLDEKGKKMNRKLSINYLQSSMS-RPEAYSESNKRSYKMGKPERGMNRVSSISRQA-LS 2640
             LLD KGKKMNRKL ++  Q+  S + E Y    KR ++  K E+G +R   IS+Q  LS
Sbjct: 361  PLLDGKGKKMNRKLRMSNSQNLASPKSEFYYVKGKRRFRTNKIEQGNSRPLDISKQVQLS 420

Query: 2639 KGEINSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGE 2460
            K E++++RR+QVP IRDTL QL    MLPAIWFIFSRRGCDAAV+Y+EDC+LL +CE  E
Sbjct: 421  KHELSNMRRSQVPLIRDTLSQLWENGMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCEASE 480

Query: 2459 VELRLRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATET 2280
            VEL LR+F+MQYPDA+RE AVKGL+ GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATET
Sbjct: 481  VELELRRFKMQYPDAIRESAVKGLMRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540

Query: 2279 LAAGINMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDG 2100
            LAAGINMPART++I+SLSKR +AGR LL+ NEL QMAGRAGRRGID VGH VL+QTPY+G
Sbjct: 541  LAAGINMPARTAVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHAVLVQTPYEG 600

Query: 2099 AEECCELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKL 1920
             EECC+++FAGLEPLVSQFTASYGMVLNLLAG+K+T K KE D+     SGRTLEEARKL
Sbjct: 601  PEECCDIIFAGLEPLVSQFTASYGMVLNLLAGSKVTHKQKESDDVKDKHSGRTLEEARKL 660

Query: 1919 VEQSFGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQ 1740
            VEQSFGNYVGSNVM+AAKEE  +IRQEI+ LS E+ D+++DRKCRE+L E +Y EIS LQ
Sbjct: 661  VEQSFGNYVGSNVMVAAKEETERIRQEIQYLSSEITDESIDRKCREELSEEDYAEISLLQ 720

Query: 1739 EELRAEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIG 1560
            + L+ EK++R EL++KMEL RMAAWK+ LE+F +G LPFMCLQYKD +++QHT+PAV+IG
Sbjct: 721  KRLKEEKQIRNELKKKMELERMAAWKNRLEEFESGHLPFMCLQYKDKDSIQHTIPAVFIG 780

Query: 1559 NVNSFNARKILSMT---SVYTGVEDHNDS----RPDYYVALGSDNSWYLFTEKWVKCVYR 1401
            N+NSF  +KI++M    S+ +G    +      RP YYVAL SDNSWYLFTEKW+K VY+
Sbjct: 781  NLNSFADQKIMNMVEDDSLVSGKPKRDSGEQLYRPSYYVALSSDNSWYLFTEKWIKTVYK 840

Query: 1400 TGFPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVL 1221
            TG P V S  G  LPRE+L  LL++EEL W+K+  SE+G L  MEGSL+TWSWSLNVPVL
Sbjct: 841  TGLPAVPSVEGGTLPRETLKQLLLREELVWDKVEKSEYGSLLSMEGSLDTWSWSLNVPVL 900

Query: 1220 SNLSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKI 1041
            ++LSE++EV+ +S E++DAV CYK+QRRKVS LKK I  T+GFKEF+K+IDM NFTKEKI
Sbjct: 901  NSLSEDNEVERFSQEHQDAVECYKQQRRKVSHLKKTIKATRGFKEFQKIIDMRNFTKEKI 960

Query: 1040 ERLEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENE 861
            ERLEARS RL +RI QIEP+GWKEFLQISKVIQEARALDIN  V++PLGETA AIRGENE
Sbjct: 961  ERLEARSRRLTRRIRQIEPTGWKEFLQISKVIQEARALDINTQVIYPLGETAAAIRGENE 1020

Query: 860  LWLAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEER 681
            LWLAMVLRN+VL+DLKP+QLAAVCGSLVSEGIKLRPW+N+SY+YEPSS+V  VI+ LEE+
Sbjct: 1021 LWLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVVTGVISYLEEQ 1080

Query: 680  RSSLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDL 501
            R+SL+ +QE++ VKI C +D+QF GMVEAWASGLTWREIMMD AMD+GDLARLLRR+IDL
Sbjct: 1081 RNSLIDLQERHSVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRSIDL 1140

Query: 500  LSQIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            L+QIPKLPDIDP+LQ  A  A SVMDR PISELAG
Sbjct: 1141 LAQIPKLPDIDPVLQKNAQIACSVMDRVPISELAG 1175


>ref|XP_008221485.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            [Prunus mume]
          Length = 1180

 Score = 1497 bits (3875), Expect = 0.0
 Identities = 753/1045 (72%), Positives = 882/1045 (84%), Gaps = 12/1045 (1%)
 Frame = -1

Query: 3494 KLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSVVVSAPTSSGK 3315
            K QRVE+L ++V+  GE++ID +ELASIYDFRIDKFQRLAIQ+FLRGSSVVVSAPTSSGK
Sbjct: 136  KWQRVEKLCSEVKVFGEEMIDDEELASIYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGK 195

Query: 3314 TLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGDSSINKDAQIL 3135
            TLI         A+GRRLFYTTPLKALSNQKFREFR++FG++NVGLLTGDS++NKDAQ+L
Sbjct: 196  TLIAEAASVATVARGRRLFYTTPLKALSNQKFREFRETFGDDNVGLLTGDSAVNKDAQVL 255

Query: 3134 IMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCSKEVQL 2955
            IMTTEILRNMLYQSVG+ SSG  LFHVDVIVLDEVHYLSD+ RGTVWEEIVIYC K+VQL
Sbjct: 256  IMTTEILRNMLYQSVGMASSGDGLFHVDVIVLDEVHYLSDMYRGTVWEEIVIYCPKKVQL 315

Query: 2954 ICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLLDEKGKKMNRK 2775
            ICLSATVANPDELAGWIGQIHGKTELVTS+RRPVPLTWHFS K S++ LLD+ GK MNR+
Sbjct: 316  ICLSATVANPDELAGWIGQIHGKTELVTSSRRPVPLTWHFSTKTSLLPLLDKTGKHMNRR 375

Query: 2774 LSINYLQSSMSRPEAYSE--SNKRSYKMGKPERGMN-RVSSISRQALSKGEINSLRRTQV 2604
            LS+NYLQ + S  ++Y +  S +RS +    E   +    ++SR+ LSK +IN + R+QV
Sbjct: 376  LSVNYLQLNASGTKSYKDDGSRRRSSRRRASEMSYDDSTGNMSRRPLSKNDINLIHRSQV 435

Query: 2603 PQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVELRLRKFRMQY 2424
            PQI DTL  L S+DMLPAIWFIFSR+GCDAAVQY++D  LLD+CE  EV+L L++FR++Y
Sbjct: 436  PQITDTLWHLKSRDMLPAIWFIFSRKGCDAAVQYVQDNNLLDDCEMSEVQLALKRFRIKY 495

Query: 2423 PDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAAGINMPARTS 2244
            PDA+RE AVKGLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATETLAAGINMPART+
Sbjct: 496  PDAIRETAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTA 555

Query: 2243 IIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEECCELLFAGL 2064
            IIASLSKRS+ GR  LS NEL QMAGRAGRRGIDE GHVVL+Q+PY+GAE CC+++FAGL
Sbjct: 556  IIASLSKRSDGGRTQLSPNELFQMAGRAGRRGIDERGHVVLVQSPYEGAEACCKIVFAGL 615

Query: 2063 EPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQSFGNYVGSN 1884
            EPLVSQFTASYGMVLNLLAGAK+T +  E D+T AS+SGRTLEEARKLVEQSFGNYVGSN
Sbjct: 616  EPLVSQFTASYGMVLNLLAGAKVTHRSNESDDTEASQSGRTLEEARKLVEQSFGNYVGSN 675

Query: 1883 VMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEELRAEKRLRTE 1704
            VMLAAKEELT+I++EIE+L+LE+ DDA+DRK R+ L    Y EI+ LQEELRAEKRLRTE
Sbjct: 676  VMLAAKEELTRIQKEIEILTLEISDDAIDRKSRKLLSGPAYKEIADLQEELRAEKRLRTE 735

Query: 1703 LRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVNSFNARKILS 1524
            LR++ME +++++ + +LE+F NG LPF+CLQYKD+E VQH++PAVY+G V+SF++ K+  
Sbjct: 736  LRRRMESQKLSSLRPMLEEFENGHLPFLCLQYKDSEGVQHSIPAVYLGKVDSFSSSKLKH 795

Query: 1523 MTS---------VYTGVEDHNDSRPDYYVALGSDNSWYLFTEKWVKCVYRTGFPDVISAG 1371
            M S         V +  E +    P YYVALGSDNSWYLFTEKW+K VY+TGFP+V  A 
Sbjct: 796  MVSADDAFALNAVTSEFESNLVFEPSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVALAL 855

Query: 1370 GNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVLSNLSEEDEVK 1191
            G+ LPRE +  LL K EL+WEKL +SE G  W MEGSLETWSWSLNVPVL++LSE DE+ 
Sbjct: 856  GDALPREIMSMLLDKTELKWEKLGESELGGFWNMEGSLETWSWSLNVPVLNSLSEHDELL 915

Query: 1190 HWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKIERLEARSNRL 1011
            H S  Y +AV  YK+QR KVSRLKKKI+ T+GF+E+KK++DM  FT+EKI+RL+ RS RL
Sbjct: 916  HKSEAYHNAVERYKDQRNKVSRLKKKISRTQGFREYKKIVDMAKFTEEKIKRLKGRSRRL 975

Query: 1010 AKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENELWLAMVLRNR 831
              RIEQIEPSGWKEFLQIS VI E RALDIN HVMFPLG TA AIRGENELWLAMVLRN+
Sbjct: 976  TNRIEQIEPSGWKEFLQISNVIHETRALDINTHVMFPLGVTAAAIRGENELWLAMVLRNK 1035

Query: 830  VLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEERRSSLMQIQEK 651
            +LIDLKP +LAAVC SLVSEGIK+RPW+NNSYIYEPSS V DV+N L+E+RSS +Q+QEK
Sbjct: 1036 ILIDLKPPELAAVCASLVSEGIKVRPWKNNSYIYEPSSTVVDVVNFLDEQRSSFLQLQEK 1095

Query: 650  YGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLSQIPKLPDI 471
            +GV   C LD+QF GMVEAW SGLTWREIMMDCAMDEGDLARLLRRTIDLL QIPKLPDI
Sbjct: 1096 HGVNKPCYLDTQFSGMVEAWVSGLTWREIMMDCAMDEGDLARLLRRTIDLLVQIPKLPDI 1155

Query: 470  DPLLQNRASQASSVMDRAPISELAG 396
            DPLLQ+ A  AS++MDR PISELAG
Sbjct: 1156 DPLLQSNAKTASNIMDRPPISELAG 1180


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score = 1494 bits (3868), Expect = 0.0
 Identities = 761/1068 (71%), Positives = 883/1068 (82%), Gaps = 19/1068 (1%)
 Frame = -1

Query: 3542 GGHQSLSERFESK------EGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQR 3381
            GG +S SE   S       E  K QRVE+L  +VRE G++IID +ELASIY FRIDKFQR
Sbjct: 100  GGEESDSELESSVSEVLNIEETKKQRVEKLRGEVREFGDEIIDANELASIYSFRIDKFQR 159

Query: 3380 LAIQSFLRGSSVVVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKS 3201
            LAIQ+FLRGSSVVVSAPTSSGKTLI         AKGRRLFYTTPLKALSNQKFREF ++
Sbjct: 160  LAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVAKGRRLFYTTPLKALSNQKFREFCET 219

Query: 3200 FGENNVGLLTGDSSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYL 3021
            FGE+NVGLLTGDS++N+DAQ+LIMTTEILRNMLYQSVG+ SS G L HVDVIVLDEVHYL
Sbjct: 220  FGESNVGLLTGDSAVNRDAQVLIMTTEILRNMLYQSVGVASSDGGLLHVDVIVLDEVHYL 279

Query: 3020 SDISRGTVWEEIVIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTW 2841
            SDISRGTVWEEIVIYC KEVQLICLSATVANPDELAGWIGQIHG+TELVTS++RPVPLTW
Sbjct: 280  SDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGRTELVTSSKRPVPLTW 339

Query: 2840 HFSLKNSMVRLLDEKGKKMNRKLSINYLQSSMSRPEAYSESNKRSYKMGKPERGMNRVSS 2661
            HF  K ++V LLD+KG  MNRKLS+NYLQ   S  E Y E   +  K  K E  +     
Sbjct: 340  HFGTKTALVPLLDDKGTSMNRKLSLNYLQYDESASELYKEEGSKRRKSRKRENDV----- 394

Query: 2660 ISRQALSKGEINSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLL 2481
               + LSK +IN++RR+QVPQI DTL  L ++DMLPA+WFIFSR+GCDAAVQY+EDC+LL
Sbjct: 395  ---RPLSKNDINNIRRSQVPQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLL 451

Query: 2480 DECETGEVELRLRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVK 2301
            DECET EVEL L++FR+QYPDAVR  AVKGL  GVAAHHAGCLPLWK+F+EELFQRGLVK
Sbjct: 452  DECETSEVELALKRFRIQYPDAVRVSAVKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVK 511

Query: 2300 VVFATETLAAGINMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVL 2121
            VVFATETLAAGINMPART++I+SLSKR ++G   LSSNEL QMAGRAGRRGIDE GHVVL
Sbjct: 512  VVFATETLAAGINMPARTAVISSLSKRGDSGLVQLSSNELLQMAGRAGRRGIDEKGHVVL 571

Query: 2120 LQTPYDGAEECCELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRT 1941
            +QTPY+G EECC++LF+GL+PLVSQFTASYGMVLNLLAGAK+TR+  E DE   SR+GRT
Sbjct: 572  VQTPYEGPEECCKVLFSGLQPLVSQFTASYGMVLNLLAGAKVTRRSSELDEIKVSRAGRT 631

Query: 1940 LEEARKLVEQSFGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEY 1761
            LEEARKL+EQSFGNYVGSNVMLAAKEEL +I +EIE L+ E+ ++A+DRK ++ L +T Y
Sbjct: 632  LEEARKLIEQSFGNYVGSNVMLAAKEELARIEKEIETLTSEISEEAIDRKSQKLLAQTAY 691

Query: 1760 DEISKLQEELRAEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHT 1581
             EI++LQEELRAEKRLRTELR+KMEL R+ + K LL++  +G LPFM L Y D++ VQH 
Sbjct: 692  QEIAELQEELRAEKRLRTELRRKMELERVFSLKPLLKELEDGHLPFMSLHYSDSDGVQHL 751

Query: 1580 VPAVYIGNVNSFNARKILSMTSVY------TGVEDHN-------DSRPDYYVALGSDNSW 1440
            V AVY+G V++ N  K+ SM   Y      T VE+         D +P Y+VALGSDNSW
Sbjct: 752  VAAVYLGKVDTLNIEKLKSMVRDYDAFALKTVVENFEVGDIGGEDVKPSYHVALGSDNSW 811

Query: 1439 YLFTEKWVKCVYRTGFPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGS 1260
            YLFTEKW++ VYRTGFP+V  A G+ LPRE + +LL K E+QW+KLA SE G LWC+EGS
Sbjct: 812  YLFTEKWIRMVYRTGFPNVALALGDALPREIMTELLDKAEMQWQKLAVSELGGLWCLEGS 871

Query: 1259 LETWSWSLNVPVLSNLSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFK 1080
            LETWSWSLNVPVLS+LSEEDEV   S  Y DAV CYK QR KVSRLKK+I  T+GFKE+K
Sbjct: 872  LETWSWSLNVPVLSSLSEEDEVLQLSQAYNDAVECYKNQRNKVSRLKKRIARTEGFKEYK 931

Query: 1079 KVIDMTNFTKEKIERLEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFP 900
            K+ID   FT+EKI RL+ RS RL  RIEQIEP+GWKEFLQ+S VI E+RALDIN HV+FP
Sbjct: 932  KIIDSAKFTQEKIRRLKVRSKRLIGRIEQIEPTGWKEFLQVSNVIHESRALDINTHVIFP 991

Query: 899  LGETAGAIRGENELWLAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPS 720
            LGETA AIRGENELWLAMVLRN++L+DLKPAQLAAVCGSLVSEGI+LRPW+NNS++YEPS
Sbjct: 992  LGETAAAIRGENELWLAMVLRNKLLLDLKPAQLAAVCGSLVSEGIRLRPWKNNSFVYEPS 1051

Query: 719  SIVADVINLLEERRSSLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDE 540
            + V +VI+LLEE +SS++++QEK+GV+I C LDSQF GMVEAWASGLTW+EIMMDCAMDE
Sbjct: 1052 TTVLNVIDLLEETKSSILELQEKHGVQIPCCLDSQFSGMVEAWASGLTWKEIMMDCAMDE 1111

Query: 539  GDLARLLRRTIDLLSQIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            GDLARLLRRTIDLL+QIPKLPDIDPLLQ+ A  ASSVMDR PISELAG
Sbjct: 1112 GDLARLLRRTIDLLAQIPKLPDIDPLLQSNAKGASSVMDRPPISELAG 1159


>ref|XP_009596143.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            [Nicotiana tomentosiformis]
            gi|697101457|ref|XP_009596152.1| PREDICTED: DEAD-box
            ATP-dependent RNA helicase ISE2, chloroplastic [Nicotiana
            tomentosiformis]
          Length = 1160

 Score = 1494 bits (3867), Expect = 0.0
 Identities = 755/1057 (71%), Positives = 883/1057 (83%), Gaps = 12/1057 (1%)
 Frame = -1

Query: 3530 SLSERFESKEGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGS 3351
            S+SE    +E  K QRVE+L ++VRE G++IID +ELASIY FRIDKFQRLAIQ+FLRGS
Sbjct: 113  SVSEVLNIEETRK-QRVEKLRSEVREFGDEIIDANELASIYSFRIDKFQRLAIQAFLRGS 171

Query: 3350 SVVVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLT 3171
            SVVVSAPTSSGKTLI         AKGRRLFYTTPLKALSNQKFREF ++FGE+NVGLLT
Sbjct: 172  SVVVSAPTSSGKTLIAEAAAVATVAKGRRLFYTTPLKALSNQKFREFCETFGESNVGLLT 231

Query: 3170 GDSSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWE 2991
            GDS++N+DAQ+LIMTTEILRNMLYQSVG+ SS G L HVDVIVLDEVHYLSDISRGTVWE
Sbjct: 232  GDSAVNRDAQVLIMTTEILRNMLYQSVGVASSDGGLLHVDVIVLDEVHYLSDISRGTVWE 291

Query: 2990 EIVIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVR 2811
            EIVIYC KEVQLICLSATVANPDELAGWIGQIHG+TELVTS++RP+PLTWHF  K ++V 
Sbjct: 292  EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGRTELVTSSKRPIPLTWHFGTKTALVP 351

Query: 2810 LLDEKGKKMNRKLSINYLQSSMSRPEAYSESNKRSYKMGKPERGMNRVSSISRQALSKGE 2631
            LLD+KG  MNRKLS+NYLQ   S  E Y E   +  K  K E  +        + LSK +
Sbjct: 352  LLDDKGTSMNRKLSLNYLQYDESASELYKEEGSKRRKSRKRENDV--------RPLSKND 403

Query: 2630 INSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVEL 2451
            IN++RR+QVPQI DTL  L ++DMLPA+WFIFSR+GCDAAVQY+EDC+LLDECET EVEL
Sbjct: 404  INNIRRSQVPQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVEL 463

Query: 2450 RLRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAA 2271
             L++FR+QYPDAVR  AVKGL  GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATETLAA
Sbjct: 464  ALKRFRIQYPDAVRVSAVKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAA 523

Query: 2270 GINMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEE 2091
            GINMPART++I+SLSKR + GR  LSSNEL QMAGRAGRRGIDE GHVVL+QTPY+G EE
Sbjct: 524  GINMPARTAVISSLSKRGDGGRVQLSSNELFQMAGRAGRRGIDEKGHVVLVQTPYEGPEE 583

Query: 2090 CCELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQ 1911
            CC++LF+GL+PLVSQFTASYGMVLNLLAGAK+TR+  + DE   SR+GRTLEEARKL+EQ
Sbjct: 584  CCKILFSGLQPLVSQFTASYGMVLNLLAGAKVTRRSSDLDEIKVSRAGRTLEEARKLIEQ 643

Query: 1910 SFGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEEL 1731
            SFGNYVGSNVMLAAKEEL +I +EIE+L+ E+ ++A+DRK ++ L ++ Y EI++LQEEL
Sbjct: 644  SFGNYVGSNVMLAAKEELARIEKEIEILTSEISEEAIDRKSQKLLAQSAYQEIAELQEEL 703

Query: 1730 RAEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVN 1551
            RAEKRLRTELR+KMEL R+ + K LL++  +G LPFM L Y D++ VQH V AVY+G V+
Sbjct: 704  RAEKRLRTELRRKMELERVFSLKPLLKELEDGHLPFMSLHYSDSDGVQHLVAAVYLGKVD 763

Query: 1550 SFNARKILSMTSVY------TGVEDHN------DSRPDYYVALGSDNSWYLFTEKWVKCV 1407
            + N  K+ SM   Y      T VE+        D +P Y+VALGSDNSWYLFTEKW++ V
Sbjct: 764  TLNIEKLKSMVRDYDAFALKTVVENFEVGDSGGDVKPSYHVALGSDNSWYLFTEKWIRMV 823

Query: 1406 YRTGFPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVP 1227
            YRTGFP+V  A G+ LPRE + +LL K E+QW+KLA SE G LWC+EGSLETWSWSLNVP
Sbjct: 824  YRTGFPNVALALGDALPREIMTELLDKAEMQWQKLAVSELGGLWCLEGSLETWSWSLNVP 883

Query: 1226 VLSNLSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKE 1047
            VLS+LSEEDEV   S  Y DAV CYK QR KVSRLKK+I  T+GFKE+KK+ID   FT+E
Sbjct: 884  VLSSLSEEDEVLQLSQAYNDAVECYKNQRNKVSRLKKRIARTEGFKEYKKIIDSAKFTEE 943

Query: 1046 KIERLEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGE 867
            KI RL+ RS RL  RIEQIEP+GWKEFLQ+S VI E+RALDIN HV+FPLGETA AIRGE
Sbjct: 944  KIRRLKVRSKRLIGRIEQIEPTGWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRGE 1003

Query: 866  NELWLAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLE 687
            NELWLAMVLRN++L+DLKPAQLAAVCGSLVSEGI+LRPW+NNS++YEPS+ V +VI+LLE
Sbjct: 1004 NELWLAMVLRNKLLLDLKPAQLAAVCGSLVSEGIRLRPWKNNSFVYEPSTTVLNVIDLLE 1063

Query: 686  ERRSSLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 507
            E +SS++++QEK+GV+I C LDSQF GMVEAWASGLTW+EIMMDCAMDEGDLARLLRRTI
Sbjct: 1064 ETKSSILELQEKHGVQIPCCLDSQFSGMVEAWASGLTWKEIMMDCAMDEGDLARLLRRTI 1123

Query: 506  DLLSQIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            DLL+QIPKLPDIDPLLQ+ A  AS+VMDR PISELAG
Sbjct: 1124 DLLAQIPKLPDIDPLLQSNAKGASNVMDRPPISELAG 1160


>ref|XP_007227036.1| hypothetical protein PRUPE_ppa000444mg [Prunus persica]
            gi|462423972|gb|EMJ28235.1| hypothetical protein
            PRUPE_ppa000444mg [Prunus persica]
          Length = 1178

 Score = 1491 bits (3860), Expect = 0.0
 Identities = 750/1045 (71%), Positives = 881/1045 (84%), Gaps = 12/1045 (1%)
 Frame = -1

Query: 3494 KLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSVVVSAPTSSGK 3315
            K QRVE+L ++V+  GE++ID +ELASIYDFRIDKFQRLAIQ+FLRGSSVVVSAPTSSGK
Sbjct: 134  KWQRVEKLCSEVKVFGEEMIDDEELASIYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGK 193

Query: 3314 TLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGDSSINKDAQIL 3135
            TLI         A+G RLFYTTPLKALSNQKFREFR++FG++NVGLLTGDS++NKDAQ+L
Sbjct: 194  TLIAEAAAVATVARGMRLFYTTPLKALSNQKFREFRETFGDDNVGLLTGDSAVNKDAQVL 253

Query: 3134 IMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCSKEVQL 2955
            IMTTEILRNMLYQSVG+ SSG  LFHVDVIVLDEVHYLSD+ RGTVWEEIVIYC K+VQL
Sbjct: 254  IMTTEILRNMLYQSVGMASSGDGLFHVDVIVLDEVHYLSDMYRGTVWEEIVIYCPKKVQL 313

Query: 2954 ICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLLDEKGKKMNRK 2775
            ICLSATVANPDELAGWIGQIHGKTELVTS+RRPVPLTWHFS K S++ LLD+ GK MNR+
Sbjct: 314  ICLSATVANPDELAGWIGQIHGKTELVTSSRRPVPLTWHFSTKTSLLPLLDKTGKHMNRR 373

Query: 2774 LSINYLQSSMSRPEAYSE--SNKRSYKMGKPERGMN-RVSSISRQALSKGEINSLRRTQV 2604
            LS+NYLQ + S  ++Y +  S +RS +    E   +    ++SR+ LSK +IN + R+QV
Sbjct: 374  LSVNYLQLNASGTKSYKDDGSRRRSSRRRASEMSYDDSTGNMSRRPLSKNDINLIHRSQV 433

Query: 2603 PQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVELRLRKFRMQY 2424
            PQI DTL  L S+DMLPAIWFIFSR+GCDAAVQY++D  LLD+CE  EV+L L++FR++Y
Sbjct: 434  PQITDTLWHLKSRDMLPAIWFIFSRKGCDAAVQYVQDNNLLDDCEMSEVQLALKRFRIKY 493

Query: 2423 PDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAAGINMPARTS 2244
            PDA+RE AVKGLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATETLAAGINMPART+
Sbjct: 494  PDAIRETAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTA 553

Query: 2243 IIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEECCELLFAGL 2064
            IIASLSKRS++GR  LS NEL QMAGRAGRRGIDE GHVVL+Q+PY+GAE CC+++FAGL
Sbjct: 554  IIASLSKRSDSGRTQLSPNELFQMAGRAGRRGIDERGHVVLVQSPYEGAEACCKIVFAGL 613

Query: 2063 EPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQSFGNYVGSN 1884
            EPLVSQFTASYGMVLNLLAGAK T +  E D+T AS+SGRTLEEARKLVEQSFGNYVGSN
Sbjct: 614  EPLVSQFTASYGMVLNLLAGAKFTSRSNESDDTEASQSGRTLEEARKLVEQSFGNYVGSN 673

Query: 1883 VMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEELRAEKRLRTE 1704
            VMLAAKEELT+I++EIE+L+LE+ DDA+DRK R+ L    Y EI+ LQEELRAEKRLRTE
Sbjct: 674  VMLAAKEELTRIQKEIEILTLEISDDAIDRKSRKLLSGPAYKEIADLQEELRAEKRLRTE 733

Query: 1703 LRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVNSFNARKILS 1524
            LR++ME +++++ + +LE+F +G LPF+CLQYKD+E VQH++PAVY+G V+SF+  K+  
Sbjct: 734  LRRRMESQKLSSLRPMLEEFEDGHLPFLCLQYKDSEGVQHSIPAVYLGKVDSFSRSKLKH 793

Query: 1523 MTS---------VYTGVEDHNDSRPDYYVALGSDNSWYLFTEKWVKCVYRTGFPDVISAG 1371
            M S         V +  E +    P YYVALGSDNSWYLFTEKW+K +Y+TGFP+V  A 
Sbjct: 794  MVSADDAFALNAVTSEFESNLVFEPSYYVALGSDNSWYLFTEKWIKTIYKTGFPNVALAL 853

Query: 1370 GNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVLSNLSEEDEVK 1191
            G+ LPRE +  LL K EL+WEKLA+SE G  W MEGSLETWSWSLNVPVL++LSE DE+ 
Sbjct: 854  GDALPREIMSMLLDKTELKWEKLAESELGGFWNMEGSLETWSWSLNVPVLNSLSEHDELL 913

Query: 1190 HWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKIERLEARSNRL 1011
            H S  Y +AV  YK+QR KVSRLKKKI+ T+GF+E+KK++DM  FT+EKI+RL+ RS RL
Sbjct: 914  HKSEAYHNAVERYKDQRNKVSRLKKKISRTQGFREYKKIVDMAKFTEEKIKRLKGRSRRL 973

Query: 1010 AKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENELWLAMVLRNR 831
              RIEQIEPSGWKEFLQIS VI E RALDIN HVMFPLG TA AIRGENELWLAMVLRN+
Sbjct: 974  TNRIEQIEPSGWKEFLQISNVIHETRALDINTHVMFPLGVTAAAIRGENELWLAMVLRNK 1033

Query: 830  VLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEERRSSLMQIQEK 651
            +LIDLKP +LAAVC SLVSEGIK+RPW+NNSYIYEPSS V DV+N L+E+RSS +Q+QEK
Sbjct: 1034 ILIDLKPPELAAVCASLVSEGIKIRPWKNNSYIYEPSSTVVDVVNFLDEQRSSFLQLQEK 1093

Query: 650  YGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLSQIPKLPDI 471
            +GV   C LD+QF GMVEAW SGLTW+EIMMDCAMDEGDLARLLRRTIDLL QIPKLPDI
Sbjct: 1094 HGVNKPCYLDTQFSGMVEAWVSGLTWKEIMMDCAMDEGDLARLLRRTIDLLVQIPKLPDI 1153

Query: 470  DPLLQNRASQASSVMDRAPISELAG 396
            DPLLQ+ A  AS++MDR PISELAG
Sbjct: 1154 DPLLQSNAKTASNIMDRPPISELAG 1178


>ref|XP_009765632.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            isoform X1 [Nicotiana sylvestris]
          Length = 1156

 Score = 1490 bits (3857), Expect = 0.0
 Identities = 752/1058 (71%), Positives = 877/1058 (82%), Gaps = 13/1058 (1%)
 Frame = -1

Query: 3530 SLSERFESKEGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGS 3351
            SLSE     E  K QRVE+L  +VRE G++IID +ELASIY FRIDKFQRLAIQ+FLRGS
Sbjct: 108  SLSELLNFDETRK-QRVEKLRNEVREFGDEIIDANELASIYSFRIDKFQRLAIQAFLRGS 166

Query: 3350 SVVVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLT 3171
            SVVVSAPTSSGKTLI         AKGRRLFYTTPLKALSNQKFREF ++FGE+NVGLLT
Sbjct: 167  SVVVSAPTSSGKTLIAEAAAVATVAKGRRLFYTTPLKALSNQKFREFCETFGESNVGLLT 226

Query: 3170 GDSSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWE 2991
            GDS++N+DAQ+LIMTTEILRNMLYQS+G+ SS G L HVDVIVLDEVHYLSDISRGTVWE
Sbjct: 227  GDSAVNRDAQVLIMTTEILRNMLYQSIGVASSDGGLLHVDVIVLDEVHYLSDISRGTVWE 286

Query: 2990 EIVIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVR 2811
            EIVIYC KEVQLICLSATVANPDELAGWIGQIHG+TELVTS++RPVPLTWHF  K ++V 
Sbjct: 287  EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGRTELVTSSKRPVPLTWHFGTKTALVP 346

Query: 2810 LLDEKGKKMNRKLSINYLQSSMSRPEAYSESNKRSYKMGKPERGMNRVSSISRQALSKGE 2631
            LLD+KG +MNRKLS+NYLQ   S  E Y E   +  K  K E  +        + LSK +
Sbjct: 347  LLDDKGTRMNRKLSLNYLQYDESASELYKEEGSKRRKSRKCENDV--------RPLSKND 398

Query: 2630 INSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVEL 2451
            IN++RR+QVPQI DTL  L ++DMLPA+WFIFSR+GCDAAVQY+EDC+LLDECET EVEL
Sbjct: 399  INNIRRSQVPQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVEL 458

Query: 2450 RLRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAA 2271
             L++FR+QYPDAVR  AVKGL  GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATETLAA
Sbjct: 459  ALKRFRIQYPDAVRVTAVKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAA 518

Query: 2270 GINMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEE 2091
            GINMPART++I+SLSKR ++GR  LSSNEL QMAGRAGRRGIDE GHVVL+QTPY+G EE
Sbjct: 519  GINMPARTAVISSLSKRGDSGRVQLSSNELFQMAGRAGRRGIDEKGHVVLVQTPYEGPEE 578

Query: 2090 CCELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQ 1911
            CC++LF+GL+PLVSQFTASYGMVLNLLAGAK+TR+  E DE   SR+GRTLEEARKL+EQ
Sbjct: 579  CCKVLFSGLQPLVSQFTASYGMVLNLLAGAKVTRRSSELDEIKVSRAGRTLEEARKLIEQ 638

Query: 1910 SFGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEEL 1731
            SFGNYVGSNVM AAKEEL +I +EIE L+ E+ ++A+DRK ++ L ++ Y EI+ LQEEL
Sbjct: 639  SFGNYVGSNVMFAAKEELARIEKEIETLTSEISEEAIDRKSQKLLAQSAYQEIAGLQEEL 698

Query: 1730 RAEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVN 1551
            RAEKRLRTELR+KMEL R+ + K LL++  +G LPFM L Y D++ VQH V AVY+G V+
Sbjct: 699  RAEKRLRTELRRKMELERVFSLKPLLKELEDGHLPFMSLHYSDSDGVQHLVAAVYLGKVD 758

Query: 1550 SFNARKILSMTSVY-------------TGVEDHNDSRPDYYVALGSDNSWYLFTEKWVKC 1410
            + N  K+ SM   Y              G     D++P Y+VALGSDNSWYLFTEKW++ 
Sbjct: 759  TLNIEKLKSMVRDYDAFALKTVVENFEVGDSGGEDAKPSYHVALGSDNSWYLFTEKWIRM 818

Query: 1409 VYRTGFPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNV 1230
            VYRTGFP+V  A G+ LPRE + +LL K E+QW+KLA SE G LWC+EGSLETWSWSLNV
Sbjct: 819  VYRTGFPNVALALGDALPREIMTELLDKAEMQWQKLAVSELGGLWCLEGSLETWSWSLNV 878

Query: 1229 PVLSNLSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTK 1050
            PVLS+LSEEDEV   S  Y DAV CYK QR KVSRLKK+I  T+GFKE+KK+ID   FT+
Sbjct: 879  PVLSSLSEEDEVLQLSQAYNDAVECYKNQRNKVSRLKKRIARTEGFKEYKKIIDSAKFTE 938

Query: 1049 EKIERLEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRG 870
            EKI RL+ RS RL  RIEQIEP+GWKEFLQ+S VI E+RALDIN HV+FPLGETA AIRG
Sbjct: 939  EKIRRLKVRSKRLIGRIEQIEPTGWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRG 998

Query: 869  ENELWLAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLL 690
            ENELWLA VLRN++L+DLKPAQLAAVCGSLVSEGI+LRPW+NNS++YEPS+ V +VI+LL
Sbjct: 999  ENELWLATVLRNKLLLDLKPAQLAAVCGSLVSEGIRLRPWKNNSFVYEPSTAVLNVIDLL 1058

Query: 689  EERRSSLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRT 510
            EE +SS++++QEK+GV+I C LDSQF GMVEAWASGLTW+EIMMDCAMDEGDLARLLRRT
Sbjct: 1059 EETKSSILELQEKHGVQIPCCLDSQFSGMVEAWASGLTWKEIMMDCAMDEGDLARLLRRT 1118

Query: 509  IDLLSQIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            IDLL+QIPKLPDIDPLLQ+ A  AS++MDR PISELAG
Sbjct: 1119 IDLLAQIPKLPDIDPLLQSNAKGASNIMDRPPISELAG 1156


>ref|XP_007044458.1| DEAD/DEAH box helicase, putative isoform 1 [Theobroma cacao]
            gi|508708393|gb|EOY00290.1| DEAD/DEAH box helicase,
            putative isoform 1 [Theobroma cacao]
          Length = 1167

 Score = 1488 bits (3852), Expect = 0.0
 Identities = 752/1049 (71%), Positives = 869/1049 (82%), Gaps = 18/1049 (1%)
 Frame = -1

Query: 3488 QRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRGSSVVVSAPTSSGKTL 3309
            QRVERL   VRE G+++ID D LA IYDFRIDKFQR+AI++FLRGSSVVVSAPTSSGKTL
Sbjct: 121  QRVERLCNLVREFGQEMIDVDALADIYDFRIDKFQRIAIEAFLRGSSVVVSAPTSSGKTL 180

Query: 3308 IXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLLTGDSSINKDAQILIM 3129
            I         A+G RLFYTTPLKALSNQKFR+FR++FG+NNVGLLTGDS++NKDAQ+L++
Sbjct: 181  IAEAAAVATVARGSRLFYTTPLKALSNQKFRQFRETFGDNNVGLLTGDSAVNKDAQVLVL 240

Query: 3128 TTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCSKEVQLIC 2949
            TTEILRNMLY SVG+ SSG   FHVDVIVLDEVHYLSDISRGTVWEEIVIYC KEVQLIC
Sbjct: 241  TTEILRNMLYNSVGMASSGSGFFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLIC 300

Query: 2948 LSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMVRLLDEKGKKMNRKLS 2769
            LSATVANPDELAGWIGQIHGKTELVTS+ RPVPLTWHFS K S++ LL+EKG  MNRKLS
Sbjct: 301  LSATVANPDELAGWIGQIHGKTELVTSSWRPVPLTWHFSTKTSLLPLLNEKGTHMNRKLS 360

Query: 2768 INYLQSSMSRPEAYSESNKRSYKMGKPERGMNR----VSSISRQALSKGEINSLRRTQVP 2601
            +NYLQ S S  ++Y +   R  +    +RG N     + S+S Q LSK + N + R+QVP
Sbjct: 361  LNYLQLSASGVKSYRDDGSR--RRNSRQRGRNGSLDGIVSMSEQPLSKNDKNMICRSQVP 418

Query: 2600 QIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETGEVELRLRKFRMQYP 2421
            Q+ DTL  L ++DMLPAIWFIF+RRGCDAAVQY+EDC LLD+CE  EVEL L+KFR+QYP
Sbjct: 419  QVVDTLWHLKAKDMLPAIWFIFNRRGCDAAVQYVEDCSLLDDCEMSEVELALKKFRLQYP 478

Query: 2420 DAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATETLAAGINMPARTSI 2241
            DAVRE AVKGL+ GVAAHHAGCLPLWK+FVEELFQRGLVKVVFATETLAAGINMPART++
Sbjct: 479  DAVRETAVKGLIRGVAAHHAGCLPLWKSFVEELFQRGLVKVVFATETLAAGINMPARTAV 538

Query: 2240 IASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYDGAEECCELLFAGLE 2061
            I+SLSKR+ +GR  LS NEL QMAGRAGRRGIDE GHVV++QTPY+GAEECC+LLF+G+E
Sbjct: 539  ISSLSKRTSSGRIQLSPNELLQMAGRAGRRGIDEWGHVVIVQTPYEGAEECCKLLFSGVE 598

Query: 2060 PLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARKLVEQSFGNYVGSNV 1881
            PLVSQFTASYGMVLNLL GAK+TR+  E DE NA +  RTLEEARKLVEQSFGNY+GSNV
Sbjct: 599  PLVSQFTASYGMVLNLLGGAKVTRRSNESDELNALQGRRTLEEARKLVEQSFGNYLGSNV 658

Query: 1880 MLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKLQEELRAEKRLRTEL 1701
            MLAAKEEL KI +EIE L+ E+ DDA+DRK R+ L E  Y EI+ LQEELR EKRLRTEL
Sbjct: 659  MLAAKEELAKIEKEIEALTSEISDDAIDRKSRKLLSEVAYKEIADLQEELRQEKRLRTEL 718

Query: 1700 RQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYIGNVNSFNARKILSM 1521
            R++MEL+R +A K LL++F NG LPF+CLQY+D+E VQ+ VPAVY+G V S +  K+  M
Sbjct: 719  RRRMELKRFSALKPLLKEFENGHLPFICLQYRDSEGVQNLVPAVYLGKVESLDGSKLKKM 778

Query: 1520 TSV-------YTGVE-------DHNDSRPDYYVALGSDNSWYLFTEKWVKCVYRTGFPDV 1383
             S          G E        H D  P YYVALGSDNSWYLFTEKW+K VYRTGFPDV
Sbjct: 779  VSADDSFAMGSVGTELNAGEPDSHQDVEPTYYVALGSDNSWYLFTEKWIKTVYRTGFPDV 838

Query: 1382 ISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPVLSNLSEE 1203
                G+ LPRE +  LL KEE+QWEK+ADSE G LW  EGSLETWSWSLNVPVLS+LSE 
Sbjct: 839  ALTQGDALPREIMRTLLDKEEMQWEKVADSELGGLWYTEGSLETWSWSLNVPVLSSLSES 898

Query: 1202 DEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEKIERLEAR 1023
            DEV H S EY+++V  YKEQR KV+RLKKKI  T+GF+E+KK++DM  FT+EKI+RL+AR
Sbjct: 899  DEVLHMSQEYDESVEHYKEQRNKVARLKKKIARTEGFREYKKILDMGRFTEEKIKRLKAR 958

Query: 1022 SNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGENELWLAMV 843
            SN L  R+E+IEPSGWKEF+QIS VI E RALDIN HV+FPLGETA AIRGENELWLAMV
Sbjct: 959  SNHLTNRMERIEPSGWKEFVQISNVIHETRALDINTHVIFPLGETAAAIRGENELWLAMV 1018

Query: 842  LRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEERRSSLMQ 663
            LRN++L++LKPAQLAAVC SLVSEGIK+R W+NN+YIYEPSS V +VI+LL+E+R S MQ
Sbjct: 1019 LRNKILLELKPAQLAAVCASLVSEGIKVRVWKNNNYIYEPSSTVLNVISLLDEQRYSFMQ 1078

Query: 662  IQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLSQIPK 483
            ++EK+ V+I C LD QF GMVEAWASGL+WRE+MMDCAMDEGDLARLLRRTIDLL+QIPK
Sbjct: 1079 LEEKHAVEIPCCLDGQFSGMVEAWASGLSWRELMMDCAMDEGDLARLLRRTIDLLAQIPK 1138

Query: 482  LPDIDPLLQNRASQASSVMDRAPISELAG 396
            LPDIDPLLQ  A+ AS VMDR PISELAG
Sbjct: 1139 LPDIDPLLQKNATAASDVMDRPPISELAG 1167


>gb|KQK02003.1| hypothetical protein BRADI_3g59790, partial [Brachypodium distachyon]
          Length = 1093

 Score = 1486 bits (3846), Expect = 0.0
 Identities = 746/1056 (70%), Positives = 891/1056 (84%), Gaps = 10/1056 (0%)
 Frame = -1

Query: 3533 QSLSERFESKEGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRG 3354
            +  + R +  E  K Q+V +L+A+VRE GEDIID++ELA IYDF IDKFQRLAIQ+FLRG
Sbjct: 38   EETAARRQQSEEYKSQQVAKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQAFLRG 97

Query: 3353 SSVVVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLL 3174
            SSVVVSAPTSSGKTLI         A+GRRLFYTTPLKALSNQKFR+FR +FG++NVGLL
Sbjct: 98   SSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHNVGLL 157

Query: 3173 TGDSSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVW 2994
            TGDS+INKDAQILIMTTEILRNMLYQSVG+T+S G+LF VDVIVLDEVHYLSDISRGTVW
Sbjct: 158  TGDSAINKDAQILIMTTEILRNMLYQSVGMTASQGRLFEVDVIVLDEVHYLSDISRGTVW 217

Query: 2993 EEIVIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMV 2814
            EE VIYC KEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFS K +++
Sbjct: 218  EETVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSKKFALL 277

Query: 2813 RLLDEKGKKMNRKLSINYLQS-SMSRPEAYSESNKRSYKMGKPERGMNRVS-SISRQA-L 2643
             LLD KGKKMNRKL +++ Q+ S  + E Y    KR  +  K E+  NR    IS+Q  L
Sbjct: 278  PLLDGKGKKMNRKLRMSHSQNISSPKSEFYYVKGKRKLRTNKNEQQGNRSPLDISKQVQL 337

Query: 2642 SKGEINSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETG 2463
            SK E+ ++RR+QVP IRDTL QL   DMLPAIWFIFSRRGCDAAV+Y+EDC+LL +CE  
Sbjct: 338  SKHEVTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCEAS 397

Query: 2462 EVELRLRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATE 2283
            EVEL LR+FRMQYPDA+RE AVKGL+ GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATE
Sbjct: 398  EVELELRRFRMQYPDAIRENAVKGLMRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATE 457

Query: 2282 TLAAGINMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYD 2103
            TLAAGINMPART++I+SLSKR +AGR LL+ N L QMAGRAGRRGID VGH VL+QTP +
Sbjct: 458  TLAAGINMPARTAVISSLSKRIDAGRQLLTPNNLFQMAGRAGRRGIDTVGHSVLVQTPNE 517

Query: 2102 GAEECCELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARK 1923
            G EECC+++FAGLEPLVSQFTASYGMVLNLLAG+K+T   KE  +  A RSGRTLEEARK
Sbjct: 518  GPEECCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESGDVKAKRSGRTLEEARK 577

Query: 1922 LVEQSFGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKL 1743
            LVEQSFGNYVGSNVM+AAKEEL + ++EI+ LS E+ D+ +DR+CRE+L E +Y EIS L
Sbjct: 578  LVEQSFGNYVGSNVMVAAKEELERTQKEIQYLSSEITDEFIDRRCREELSEEDYAEISLL 637

Query: 1742 QEELRAEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYI 1563
            Q++ + EK++R EL+++MEL RMAAWK+ LE+F +G LPFMCLQYKD ++V HT+PAV+I
Sbjct: 638  QKKFKEEKQIRNELKKRMELERMAAWKTRLEEFESGHLPFMCLQYKDKDSVHHTIPAVFI 697

Query: 1562 GNVNSFNARKILSM---TSVYTGVEDHNDS----RPDYYVALGSDNSWYLFTEKWVKCVY 1404
            G+++SF+ +KI SM    S+  G ++ +       P YYVAL SDNSWYLFTEKW+K VY
Sbjct: 698  GSLSSFDDQKIESMLEDDSISPGKQEVDSGGELYYPSYYVALSSDNSWYLFTEKWIKTVY 757

Query: 1403 RTGFPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPV 1224
            RTG P + S  G  LPRE+L  LL++E++ W+++A SE+G L CM+GSL+TWSWSLNVPV
Sbjct: 758  RTGLPALPSVEGGTLPRETLKQLLLREDMMWDQVAKSEYGSLSCMDGSLDTWSWSLNVPV 817

Query: 1223 LSNLSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEK 1044
            L++LSE++EV+ +S E++ AV C+K+QRRKVS+LKK I +TKGF+EF+K+ID  NFTKEK
Sbjct: 818  LNSLSEDNEVERFSQEHQTAVECHKQQRRKVSQLKKTIRSTKGFREFQKIIDRRNFTKEK 877

Query: 1043 IERLEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGEN 864
            IERLEARS RL +RI QIEP+GWKEFLQISKVIQEAR LDIN  V++PLGETA AIRGEN
Sbjct: 878  IERLEARSRRLTRRIMQIEPTGWKEFLQISKVIQEARVLDINTQVIYPLGETAAAIRGEN 937

Query: 863  ELWLAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEE 684
            ELWLAMVLRN+VL+DLKP+QLAAVCGSLVSEGIKLRPW+N+SY+YEPSS+V  VIN L+E
Sbjct: 938  ELWLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVVTGVINYLDE 997

Query: 683  RRSSLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTID 504
            +R+SL+++QEK+GVKI C +D+QF GMVEAWASGLTWREIMMD AMD+GDLARLLRRT+D
Sbjct: 998  QRNSLIELQEKHGVKIPCEIDTQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRTMD 1057

Query: 503  LLSQIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            LL+QIPKLPDIDP+LQ  A  A +VMDR P+SELAG
Sbjct: 1058 LLAQIPKLPDIDPVLQKNAQIACNVMDRVPLSELAG 1093


>ref|XP_003570680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
            [Brachypodium distachyon]
          Length = 1168

 Score = 1486 bits (3846), Expect = 0.0
 Identities = 746/1056 (70%), Positives = 891/1056 (84%), Gaps = 10/1056 (0%)
 Frame = -1

Query: 3533 QSLSERFESKEGDKLQRVERLLAQVRELGEDIIDFDELASIYDFRIDKFQRLAIQSFLRG 3354
            +  + R +  E  K Q+V +L+A+VRE GEDIID++ELA IYDF IDKFQRLAIQ+FLRG
Sbjct: 113  EETAARRQQSEEYKSQQVAKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQAFLRG 172

Query: 3353 SSVVVSAPTSSGKTLIXXXXXXXXXAKGRRLFYTTPLKALSNQKFREFRKSFGENNVGLL 3174
            SSVVVSAPTSSGKTLI         A+GRRLFYTTPLKALSNQKFR+FR +FG++NVGLL
Sbjct: 173  SSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHNVGLL 232

Query: 3173 TGDSSINKDAQILIMTTEILRNMLYQSVGLTSSGGKLFHVDVIVLDEVHYLSDISRGTVW 2994
            TGDS+INKDAQILIMTTEILRNMLYQSVG+T+S G+LF VDVIVLDEVHYLSDISRGTVW
Sbjct: 233  TGDSAINKDAQILIMTTEILRNMLYQSVGMTASQGRLFEVDVIVLDEVHYLSDISRGTVW 292

Query: 2993 EEIVIYCSKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSLKNSMV 2814
            EE VIYC KEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFS K +++
Sbjct: 293  EETVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNRRPVPLTWHFSKKFALL 352

Query: 2813 RLLDEKGKKMNRKLSINYLQS-SMSRPEAYSESNKRSYKMGKPERGMNRVS-SISRQA-L 2643
             LLD KGKKMNRKL +++ Q+ S  + E Y    KR  +  K E+  NR    IS+Q  L
Sbjct: 353  PLLDGKGKKMNRKLRMSHSQNISSPKSEFYYVKGKRKLRTNKNEQQGNRSPLDISKQVQL 412

Query: 2642 SKGEINSLRRTQVPQIRDTLRQLISQDMLPAIWFIFSRRGCDAAVQYIEDCKLLDECETG 2463
            SK E+ ++RR+QVP IRDTL QL   DMLPAIWFIFSRRGCDAAV+Y+EDC+LL +CE  
Sbjct: 413  SKHEVTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCEAS 472

Query: 2462 EVELRLRKFRMQYPDAVREVAVKGLLHGVAAHHAGCLPLWKTFVEELFQRGLVKVVFATE 2283
            EVEL LR+FRMQYPDA+RE AVKGL+ GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATE
Sbjct: 473  EVELELRRFRMQYPDAIRENAVKGLMRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATE 532

Query: 2282 TLAAGINMPARTSIIASLSKRSEAGRALLSSNELHQMAGRAGRRGIDEVGHVVLLQTPYD 2103
            TLAAGINMPART++I+SLSKR +AGR LL+ N L QMAGRAGRRGID VGH VL+QTP +
Sbjct: 533  TLAAGINMPARTAVISSLSKRIDAGRQLLTPNNLFQMAGRAGRRGIDTVGHSVLVQTPNE 592

Query: 2102 GAEECCELLFAGLEPLVSQFTASYGMVLNLLAGAKITRKLKEQDETNASRSGRTLEEARK 1923
            G EECC+++FAGLEPLVSQFTASYGMVLNLLAG+K+T   KE  +  A RSGRTLEEARK
Sbjct: 593  GPEECCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESGDVKAKRSGRTLEEARK 652

Query: 1922 LVEQSFGNYVGSNVMLAAKEELTKIRQEIELLSLEVGDDAVDRKCREQLLETEYDEISKL 1743
            LVEQSFGNYVGSNVM+AAKEEL + ++EI+ LS E+ D+ +DR+CRE+L E +Y EIS L
Sbjct: 653  LVEQSFGNYVGSNVMVAAKEELERTQKEIQYLSSEITDEFIDRRCREELSEEDYAEISLL 712

Query: 1742 QEELRAEKRLRTELRQKMELRRMAAWKSLLEDFGNGQLPFMCLQYKDNEAVQHTVPAVYI 1563
            Q++ + EK++R EL+++MEL RMAAWK+ LE+F +G LPFMCLQYKD ++V HT+PAV+I
Sbjct: 713  QKKFKEEKQIRNELKKRMELERMAAWKTRLEEFESGHLPFMCLQYKDKDSVHHTIPAVFI 772

Query: 1562 GNVNSFNARKILSM---TSVYTGVEDHNDS----RPDYYVALGSDNSWYLFTEKWVKCVY 1404
            G+++SF+ +KI SM    S+  G ++ +       P YYVAL SDNSWYLFTEKW+K VY
Sbjct: 773  GSLSSFDDQKIESMLEDDSISPGKQEVDSGGELYYPSYYVALSSDNSWYLFTEKWIKTVY 832

Query: 1403 RTGFPDVISAGGNQLPRESLMDLLMKEELQWEKLADSEFGLLWCMEGSLETWSWSLNVPV 1224
            RTG P + S  G  LPRE+L  LL++E++ W+++A SE+G L CM+GSL+TWSWSLNVPV
Sbjct: 833  RTGLPALPSVEGGTLPRETLKQLLLREDMMWDQVAKSEYGSLSCMDGSLDTWSWSLNVPV 892

Query: 1223 LSNLSEEDEVKHWSVEYEDAVRCYKEQRRKVSRLKKKITNTKGFKEFKKVIDMTNFTKEK 1044
            L++LSE++EV+ +S E++ AV C+K+QRRKVS+LKK I +TKGF+EF+K+ID  NFTKEK
Sbjct: 893  LNSLSEDNEVERFSQEHQTAVECHKQQRRKVSQLKKTIRSTKGFREFQKIIDRRNFTKEK 952

Query: 1043 IERLEARSNRLAKRIEQIEPSGWKEFLQISKVIQEARALDINNHVMFPLGETAGAIRGEN 864
            IERLEARS RL +RI QIEP+GWKEFLQISKVIQEAR LDIN  V++PLGETA AIRGEN
Sbjct: 953  IERLEARSRRLTRRIMQIEPTGWKEFLQISKVIQEARVLDINTQVIYPLGETAAAIRGEN 1012

Query: 863  ELWLAMVLRNRVLIDLKPAQLAAVCGSLVSEGIKLRPWRNNSYIYEPSSIVADVINLLEE 684
            ELWLAMVLRN+VL+DLKP+QLAAVCGSLVSEGIKLRPW+N+SY+YEPSS+V  VIN L+E
Sbjct: 1013 ELWLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVVTGVINYLDE 1072

Query: 683  RRSSLMQIQEKYGVKISCGLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTID 504
            +R+SL+++QEK+GVKI C +D+QF GMVEAWASGLTWREIMMD AMD+GDLARLLRRT+D
Sbjct: 1073 QRNSLIELQEKHGVKIPCEIDTQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRTMD 1132

Query: 503  LLSQIPKLPDIDPLLQNRASQASSVMDRAPISELAG 396
            LL+QIPKLPDIDP+LQ  A  A +VMDR P+SELAG
Sbjct: 1133 LLAQIPKLPDIDPVLQKNAQIACNVMDRVPLSELAG 1168