BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00018119
         (339 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22123.1| polyprotein [Prunus avium]                             103   5e-20
gb|ABG22121.1| polyprotein [Solanum melongena]                         97   6e-18
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]      96   1e-17
ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235...    94   3e-17
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]           93   7e-17
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]    91   3e-16
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...    91   4e-16
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    91   4e-16
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]            91   4e-16
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...    90   8e-16
gb|KFK26181.1| hypothetical protein AALP_AA8G213400 [Arabis alpina]    89   1e-15
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    86   1e-15
gb|KOM58517.1| hypothetical protein LR48_Vigan11g155100 [Vigna a...    89   2e-15
ref|XP_010912064.1| PREDICTED: uncharacterized protein LOC105038...    89   2e-15
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         88   2e-15
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      88   2e-15
gb|AFB73912.1| polyprotein [Citrus sinensis]                           88   2e-15
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    88   2e-15
emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]    87   4e-15
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    87   5e-15

>gb|ABG22123.1| polyprotein [Prunus avium]
          Length = 276

 Score =  103 bits (257), Expect = 5e-20
 Identities = 54/92 (58%), Positives = 64/92 (69%)
 Frame = -2

Query: 278 IRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAI 99
           + YV S+Y GDLD+RRSTTG+VFT++  PV WR  L S V  STTEA YMA+TEAIKEAI
Sbjct: 173 VGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAI 232

Query: 98  WXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
           W           Q+ ++V CDS SAI LAKNQ
Sbjct: 233 WLQGLLDDLGVQQDHVDVYCDSQSAIYLAKNQ 264


>gb|ABG22121.1| polyprotein [Solanum melongena]
          Length = 361

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 50/92 (54%), Positives = 61/92 (66%)
 Frame = -2

Query: 278 IRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAI 99
           + Y  S+Y GDLD+RRSTTGY+FTL++ PV W+  L + V  STTEA YMA+TEA+KEAI
Sbjct: 258 VGYCDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMAITEAVKEAI 317

Query: 98  WXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
           W           Q  + V  DS SAI LAKNQ
Sbjct: 318 WLHGLLEELGVGQKHLMVHSDSQSAIHLAKNQ 349


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 52/106 (49%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
 Frame = -2

Query: 317  LGVQRNNSGKRDCIR-YVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTE 141
            LG+         C+  +V S++ GDLDRRRST GYVFT    PV W+  L ++   STTE
Sbjct: 1136 LGIMFERRQGEACVAGFVDSDFAGDLDRRRSTAGYVFTCGGGPVSWKATLQAVTALSTTE 1195

Query: 140  A*YMAMTEAIKEAIWXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
            A YMA+TEA KEAIW           Q  + V+CDS SAI LAKNQ
Sbjct: 1196 AEYMALTEASKEAIWLNGLAGQLGVHQEGVVVKCDSQSAIHLAKNQ 1241


>ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235647 [Nicotiana
           sylvestris]
          Length = 985

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 55/112 (49%), Positives = 67/112 (59%)
 Frame = -2

Query: 338 QGHYGCWLGVQRNNSGKRDCIRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIV 159
           +G  G  L  +++ +G    + YV S+Y GDLDRRRSTTGY+FTL  + V W+  L SIV
Sbjct: 499 KGASGVGLTFRKSGTGI-SILGYVDSDYAGDLDRRRSTTGYIFTLVGSAVSWKSTLQSIV 557

Query: 158 TSSTTEA*YMAMTEAIKEAIWXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
             STTEA YMA  EA+KE IW           Q    +RCDS SAI L KNQ
Sbjct: 558 ALSTTEAEYMAAVEAVKETIWLKGLVVELSLVQLESTLRCDSQSAIHLMKNQ 609


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 51/101 (50%), Positives = 64/101 (63%)
 Frame = -2

Query: 305 RNNSGKRDCIRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMA 126
           + N G++ C+ Y  S++ GDLD++RST+GYVFTL    V WR  L S +  STTEA Y+A
Sbjct: 136 KKNCGQQ-CVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIA 194

Query: 125 MTEAIKEAIWXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
            TEA+KEAIW           Q  I V CD+ SAI LAKNQ
Sbjct: 195 ATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQ 235


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = -2

Query: 317 LGVQRNNSGKRDCIR-YVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTE 141
           +G++  +S + D I  YV S+Y GDLD+R STTGY+FTL   PV W+  L SIV  STT+
Sbjct: 606 VGLKFGSSKEGDGITGYVDSDYVGDLDKRXSTTGYIFTLFGGPVSWKSQLQSIVALSTTK 665

Query: 140 A*YMAMTEAIKEAIWXXXXXXXXXXXQNFIEVRCDSMSAIQLAKN 6
           A Y+A TEA+KEA+W            + +E+  DS SAIQL  N
Sbjct: 666 AEYIAATEAMKEALWLQGLVKELXVLNSVVEIFLDSQSAIQLCNN 710


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 48/92 (52%), Positives = 56/92 (60%)
 Frame = -2

Query: 278  IRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAI 99
            I YV S+Y  DLDRRRS TGYVFT+    V WR  L S+V  STTEA YMA+ EA KE I
Sbjct: 1182 IGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1241

Query: 98   WXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
            W           ++ I + CDS SAI L K+Q
Sbjct: 1242 WLKGLYAELSGVESCISLHCDSQSAIYLTKDQ 1273


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 48/92 (52%), Positives = 56/92 (60%)
 Frame = -2

Query: 278  IRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAI 99
            I YV S+Y  DLDRRRS TGYVFT+    V WR  L S+V  STTEA YMA+ EA KE I
Sbjct: 1182 IGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1241

Query: 98   WXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
            W           ++ I + CDS SAI L K+Q
Sbjct: 1242 WLKGLYAELSGVESCISLHCDSQSAIYLTKDQ 1273


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 48/92 (52%), Positives = 56/92 (60%)
 Frame = -2

Query: 278  IRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAI 99
            I YV S+Y  DLDRRRS TGYVFT+    V WR  L S+V  STTEA YMA+ EA KE I
Sbjct: 1184 IGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1243

Query: 98   WXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
            W           ++ I + CDS SAI L K+Q
Sbjct: 1244 WLKGLYAELSGVESCISLHCDSQSAIYLTKDQ 1275


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 48/92 (52%), Positives = 56/92 (60%)
 Frame = -2

Query: 278  IRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAI 99
            I YV S+Y  DLDRRRS TGYVFT+    V WR  L S+V  STTEA YMA+ EA KE I
Sbjct: 1182 IGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1241

Query: 98   WXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
            W           ++ I + CDS SAI L K+Q
Sbjct: 1242 WLKGLYAELSGVESCISLHCDSESAIYLTKDQ 1273


>gb|KFK26181.1| hypothetical protein AALP_AA8G213400 [Arabis alpina]
          Length = 373

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 47/90 (52%), Positives = 56/90 (62%)
 Frame = -2

Query: 272 YVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAIWX 93
           YV S+Y GDLD RR TTGYVFTL++ PV WR  L  +V  ST EA YMAM EA KEA+W 
Sbjct: 223 YVDSDYAGDLDNRRYTTGYVFTLAEGPVSWRSVLQDVVAMSTMEAEYMAMGEAAKEALWV 282

Query: 92  XXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
                     +  + +  DS SA+ LAKNQ
Sbjct: 283 QGLVAELSVERGGVLLHGDSQSAMYLAKNQ 312


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 85.9 bits (211), Expect(2) = 1e-15
 Identities = 47/90 (52%), Positives = 55/90 (61%)
 Frame = -2

Query: 272  YVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAIWX 93
            Y  S+Y GD+D RRS TGYVFTL  + V W+  L   VT STTEA YMA+TEA KE IW 
Sbjct: 1160 YSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWL 1219

Query: 92   XXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
                       +   V CDS+SAI LAK+Q
Sbjct: 1220 KGLVSDLGLHHDQATVYCDSLSAICLAKDQ 1249



 Score = 23.9 bits (50), Expect(2) = 1e-15
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 337  KGTMDVGLVYSGIT 296
            +GT DVGL+Y G T
Sbjct: 1140 RGTSDVGLIYGGDT 1153


>gb|KOM58517.1| hypothetical protein LR48_Vigan11g155100 [Vigna angularis]
          Length = 225

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 47/89 (52%), Positives = 57/89 (64%)
 Frame = -2

Query: 272 YVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAIWX 93
           YV S+Y GDLD+R+STTGYVF L+   V W   L ++V  STTEA YMA T+A KEAIW 
Sbjct: 75  YVDSDYAGDLDKRKSTTGYVFKLAGGVVSWLSKLQTVVALSTTEAEYMAATQACKEAIWI 134

Query: 92  XXXXXXXXXXQNFIEVRCDSMSAIQLAKN 6
                     QN I V CDS SA+ +A+N
Sbjct: 135 QRLLEELGHKQNKITVYCDSQSALHIARN 163


>ref|XP_010912064.1| PREDICTED: uncharacterized protein LOC105038071 [Elaeis guineensis]
          Length = 397

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 47/90 (52%), Positives = 58/90 (64%)
 Frame = -2

Query: 272 YVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAIWX 93
           +  S+Y  DLDRRRS TGYVFTLS   V W+  L SI   STTEA YMA+TEA KEAIW 
Sbjct: 247 FCDSDYACDLDRRRSLTGYVFTLSGCAVSWKATLQSIFALSTTEAEYMALTEAEKEAIWL 306

Query: 92  XXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
                     Q+ +++ CDS SA+ LA++Q
Sbjct: 307 KGLVQDLDLEQDCLDIHCDSQSALHLARDQ 336


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 46/92 (50%), Positives = 58/92 (63%)
 Frame = -2

Query: 278  IRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAI 99
            + YV S++ GDLDRRRS TGYVFT+    V W+ +L + V  STTEA YMA++EA KEAI
Sbjct: 1030 VGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAI 1089

Query: 98   WXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
            W            + I + CDS SAI L K+Q
Sbjct: 1090 WLRGLYTELCGVTSCINIFCDSQSAICLTKDQ 1121


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 46/92 (50%), Positives = 58/92 (63%)
 Frame = -2

Query: 278  IRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAI 99
            + YV S++ GDLDRRRS TGYVFT+    V W+ +L + V  STTEA YMA++EA KEAI
Sbjct: 1129 VGYVDSDFAGDLDRRRSLTGYVFTIGGCDVSWKASLQATVALSTTEAEYMAISEACKEAI 1188

Query: 98   WXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
            W            + I + CDS SAI L K+Q
Sbjct: 1189 WLRGLYTELCGVTSCINIFCDSQSAICLTKDQ 1220


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 47/89 (52%), Positives = 58/89 (65%)
 Frame = -2

Query: 272  YVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAIWX 93
            YV S++ GDLD+R+STTGYVFTL+ A V W   L ++V  STTEA YMA T+A KEAIW 
Sbjct: 1159 YVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIWI 1218

Query: 92   XXXXXXXXXXQNFIEVRCDSMSAIQLAKN 6
                      Q  I V CDS SA+ +A+N
Sbjct: 1219 QRLLEELGHKQQKIPVFCDSQSALHIARN 1247


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 46/92 (50%), Positives = 58/92 (63%)
 Frame = -2

Query: 278  IRYVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAI 99
            + YV S++ GDLDRRRS TGYVFT+    V W+ +L + V  STTEA YMA++EA KEAI
Sbjct: 1161 VGYVDSDFAGDLDRRRSLTGYVFTIGGCDVSWKASLQATVALSTTEAEYMAISEACKEAI 1220

Query: 98   WXXXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
            W            + I + CDS SAI L K+Q
Sbjct: 1221 WLRGLYTELCGVTSCINIFCDSQSAICLTKDQ 1252


>emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]
          Length = 726

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 42/89 (47%), Positives = 57/89 (64%)
 Frame = -2

Query: 272 YVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAIWX 93
           YV ++Y  DLD RRSTTGYVFTL   P+CW+  + S+V   T E+ YMA+ +A+KE++W 
Sbjct: 638 YVDADYASDLDDRRSTTGYVFTLGGGPICWKSIIQSLVALFTAESEYMAIAKAVKESLWL 697

Query: 92  XXXXXXXXXXQNFIEVRCDSMSAIQLAKN 6
                     Q  +++ CDS SAI LAKN
Sbjct: 698 IGLVKELGIQQGGVQLYCDSQSAIYLAKN 726


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 45/90 (50%), Positives = 57/90 (63%)
 Frame = -2

Query: 272  YVGSNYTGDLDRRRSTTGYVFTLSQAPVCWRRAL*SIVTSSTTEA*YMAMTEAIKEAIWX 93
            +V ++Y G++D R+S TGYVFT     V W+  L S+V  STTEA YMAMTEA+KEAIW 
Sbjct: 1058 FVDADYAGNIDTRKSLTGYVFTXFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKEAIWL 1117

Query: 92   XXXXXXXXXXQNFIEVRCDSMSAIQLAKNQ 3
                      +  + V CD+ SAI LAKNQ
Sbjct: 1118 KGITEELAMYRGKVVVYCDNQSAIHLAKNQ 1147