BLASTX nr result
ID: Ophiopogon21_contig00017466
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00017466
(599 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 45 6e-08
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 44 7e-08
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 42 1e-07
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 42 1e-07
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 42 1e-07
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 42 1e-07
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 42 2e-07
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 42 2e-07
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 41 3e-07
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 41 3e-07
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 40 7e-07
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 41 1e-06
gb|AFB73912.1| polyprotein [Citrus sinensis] 40 2e-06
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 39 3e-06
emb|CBG76256.1| OO_Ba0005L10-OO_Ba0081K17.7 [Oryza officinalis] 40 3e-06
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 40 3e-06
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 40 3e-06
ref|XP_011624386.1| PREDICTED: cellulose synthase-like protein H... 45 8e-06
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 44.7 bits (104), Expect(2) = 6e-08
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+LD+ + CL +WF+TY V+G +VLMG+D
Sbjct: 285 ELLVAYAGCAQTSDQWILDTACTYHMCLNRDWFATYEAVQGGTVLMGDD 333
Score = 39.3 bits (90), Expect(2) = 6e-08
Identities = 17/51 (33%), Positives = 33/51 (64%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C G+ ++I+M DG + TLS+VR + + ++ L+SL L+ + K++
Sbjct: 333 DTPCEVAGVETVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKVYKYS 383
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 43.5 bits (101), Expect(2) = 7e-08
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 247 CRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRC 381
C+ VGI I+I+MH G + TL+NVR V K L+ LR L++ C
Sbjct: 271 CKVVGIHXIQIKMHGGIIRTLTNVRHVPKLNKNLIFLRTLDSNGC 315
Score = 40.0 bits (92), Expect(2) = 7e-08
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +3
Query: 141 DIWLLDS--KVHISCLQGEWFSTYMYVEGSSVLMGNDVS 251
D W+LDS H+S G+WFSTY ++G VLMGN V+
Sbjct: 233 DEWILDSGCSYHMSP-NGDWFSTYQPIDGGKVLMGNKVA 270
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 42.4 bits (98), Expect(2) = 1e-07
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+LD+ + C +WF+TY V+G +VLMG+D
Sbjct: 270 ELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDD 318
Score = 40.4 bits (93), Expect(2) = 1e-07
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG + TLS+VR + + ++ L+SL L+ + K++
Sbjct: 318 DTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYS 368
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 42.4 bits (98), Expect(2) = 1e-07
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+LD+ + C +WF+TY V+G +VLMG+D
Sbjct: 102 ELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDD 150
Score = 40.4 bits (93), Expect(2) = 1e-07
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG + TLS+VR + + ++ L+SL L+ + K++
Sbjct: 150 DTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYS 200
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+LD+ + C +WF+TY V+G +VLMG+D
Sbjct: 117 ELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDD 165
Score = 40.8 bits (94), Expect(2) = 1e-07
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG +STLS+VR + + ++ L+SL L+ + K++
Sbjct: 165 DTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYS 215
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+LD+ + C +WF+TY V+G +VLMG+D
Sbjct: 117 ELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDD 165
Score = 40.8 bits (94), Expect(2) = 1e-07
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG +STLS+VR + + ++ L+SL L+ + K++
Sbjct: 165 DTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYS 215
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 42.4 bits (98), Expect(2) = 2e-07
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+LD+ + C +WF+TY V+G +VLMG+D
Sbjct: 285 ELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDD 333
Score = 40.0 bits (92), Expect(2) = 2e-07
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG + TLS+VR + + ++ L+SL L+ + K++
Sbjct: 333 DTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYS 383
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 42.0 bits (97), Expect(2) = 2e-07
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+LD+ + C +WF+TY V+G +VLMG+D
Sbjct: 227 ELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDD 275
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG + TLS+VR + ++ L+SLR L+ + K++
Sbjct: 275 DTPCEVAGIGIVQIKMFDGCIRTLSDVRHFPNLKRSLISLRTLDRKGYKYS 325
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 40.8 bits (94), Expect(2) = 3e-07
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+LD+ + C +WF+TY ++G +VLMG+D
Sbjct: 320 ELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDD 368
Score = 40.8 bits (94), Expect(2) = 3e-07
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG + TLS+VR + + ++ L+SL L+ + K++
Sbjct: 368 DTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYS 418
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 40.8 bits (94), Expect(2) = 3e-07
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+LD+ + C +WF+TY ++G +VLMG+D
Sbjct: 320 ELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDD 368
Score = 40.8 bits (94), Expect(2) = 3e-07
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG + TLS+VR + + ++ L+SL L+ + K++
Sbjct: 368 DTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYS 418
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 40.4 bits (93), Expect(2) = 7e-07
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDS--KVHISCLQGEWFSTYMYVEGSSVLMGN 242
D+ + +SD+W+LDS HI C + EWF+TY V+G S+ M N
Sbjct: 264 DIALVADEHTHHSDVWVLDSGASYHI-CPRREWFTTYEQVDGGSISMAN 311
Score = 39.7 bits (91), Expect(2) = 7e-07
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +1
Query: 241 TMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQ 375
++C+ VG +I+IR HDG TL+ VR V K L+SL L+++
Sbjct: 313 SVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSK 357
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 40.8 bits (94), Expect(2) = 1e-06
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A G + SD W+LD+ + C +WF+TY V+G +VLMG+D
Sbjct: 251 ELLVAYVGCAQTSDQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDD 299
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG + TLS+VR + + ++ L+S L+ + K++
Sbjct: 299 DTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLDRKGYKYS 349
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +3
Query: 123 GNGKYSDIWLLDSKV--HISCLQGEWFSTYMYVEGSSVLMGND 245
G + SD+WL+DS H++ + EWF TY + G SV MGND
Sbjct: 284 GRKRLSDVWLIDSGATWHMTSRR-EWFHTYEPISGGSVYMGND 325
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 259 GISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCK 384
GI I+I+M DG + T+ VR V +K LLSL +++ CK
Sbjct: 332 GIGTIKIKMFDGTIRTIEEVRHVNGLKKNLLSLGQMDSHGCK 373
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 39.3 bits (90), Expect(2) = 3e-06
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +1
Query: 241 TMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
T C+ G+ I+I+M DG + TLS+VR + ++ L+SL L+ + +++
Sbjct: 276 TPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYRYS 325
Score = 38.9 bits (89), Expect(2) = 3e-06
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD WLLD+ + C +WF+TY V+G +VLMG++
Sbjct: 227 ELLVAYAGCVQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDN 275
>emb|CBG76256.1| OO_Ba0005L10-OO_Ba0081K17.7 [Oryza officinalis]
Length = 565
Score = 39.7 bits (91), Expect(2) = 3e-06
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A G + SD W+LD+ + C +WF TY +V+G +VLMG++
Sbjct: 210 ELLVAYVGCAQTSDQWILDTACTYHMCPNRDWFVTYEFVQGGTVLMGDN 258
Score = 38.5 bits (88), Expect(2) = 3e-06
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +1
Query: 241 TMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRAL 366
T+C+ VGI I+I+M DG + TLS+V+ + + ++ ++SL L
Sbjct: 259 TLCKVVGIGTIQIKMFDGCIRTLSDVQHIPNLKRNVISLYTL 300
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 40.0 bits (92), Expect(2) = 3e-06
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG + TLS+VR + + ++ L+SL L+ + K++
Sbjct: 540 DTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYS 590
Score = 37.7 bits (86), Expect(2) = 3e-06
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+L++ ++ C +WF+TY V+ +VLMG+D
Sbjct: 492 ELLVAYAGCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDD 540
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 40.0 bits (92), Expect(2) = 3e-06
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKFA 390
+T C GI ++I+M DG + TLS+VR + + ++ L+SL L+ + K++
Sbjct: 333 DTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYS 383
Score = 37.7 bits (86), Expect(2) = 3e-06
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 DVLSAKSGNGKYSDIWLLDSK-VHISCLQGEWFSTYMYVEGSSVLMGND 245
++L A +G + SD W+L++ ++ C +WF+TY V+ +VLMG+D
Sbjct: 285 ELLVAYAGCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDD 333
>ref|XP_011624386.1| PREDICTED: cellulose synthase-like protein H1 [Amborella
trichopoda]
Length = 923
Score = 45.1 bits (105), Expect(2) = 8e-06
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +1
Query: 238 ETMCRNVGISNIRIRMHDGQLSTLSNVRRVLDPRKKLLSLRALEAQRCKF 387
+T + +G+ I+M+DG + TL++VR + D +K L+SL L++ CKF
Sbjct: 733 DTAWKTIGVGTSTIKMYDGVVRTLTDVRHIPDLKKNLISLGTLDSNDCKF 782
Score = 31.6 bits (70), Expect(2) = 8e-06
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 189 EWFSTYMYVEGSSVLMGNDVS 251
+WF+TY ++ SVLMGND +
Sbjct: 715 DWFTTYKSIDSGSVLMGNDTA 735