BLASTX nr result
ID: Ophiopogon21_contig00017426
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00017426
(578 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officin... 189 1e-45
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 146 8e-33
emb|CDP17738.1| unnamed protein product [Coffea canephora] 137 3e-30
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 122 2e-25
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 121 3e-25
gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposo... 111 2e-22
gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposo... 111 3e-22
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 109 1e-21
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 108 2e-21
gb|AAK29467.1| polyprotein-like [Solanum chilense] 108 3e-21
ref|XP_009378155.1| PREDICTED: DNA (cytosine-5)-methyltransferas... 102 1e-19
ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot... 100 5e-19
ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobrom... 98 3e-18
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 96 1e-17
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 96 1e-17
gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryz... 96 2e-17
gb|AFB73911.1| polyprotein [Citrus sinensis] 96 2e-17
gb|AFB73912.1| polyprotein [Citrus sinensis] 95 2e-17
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera] 94 4e-17
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc... 94 5e-17
>gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officinalis]
Length = 1011
Score = 189 bits (479), Expect = 1e-45
Identities = 97/171 (56%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
Frame = -3
Query: 576 GVIRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSN 397
GVIR+CL Q+LKYDV+ TS +W+ L++KYL K+VEN F M RG +L+
Sbjct: 842 GVIRSCLEQELKYDVIGVTSVMKMWEILNNKYLTKSVENRLHLLRRLFRFQMSRGTSLAA 901
Query: 396 HMNTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAAL 217
++N KLL++LANV EKISDEYK ++LL SLPDEEY+TF+LTL+NGR S+ + E++ AL
Sbjct: 902 YVNNYTKLLSNLANVDEKISDEYKTIILLGSLPDEEYDTFLLTLLNGRPSISYSEITNAL 961
Query: 216 VAYDARRKDKQSTH-STSGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKD 67
YD RRKDK+++H STSGE LSTRGRSP G + RSKSRGRH +GK+
Sbjct: 962 TNYDLRRKDKETSHASTSGEALSTRGRSPYPKGGNKGRSKSRGRHR-LGKN 1011
>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
Length = 324
Score = 146 bits (368), Expect = 8e-33
Identities = 82/191 (42%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Frame = -3
Query: 576 GVIRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSN 397
G IR+CL+++ KY V +ETSA LW L DK+L K+ +N F ++G T++
Sbjct: 41 GTIRSCLSREQKYVVKNETSAHKLWKALEDKFLKKSGQNKLLMKKRLFRFDYQQGTTMNA 100
Query: 396 HMNTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAAL 217
H+ +L+A L N+ K DE AL+L+SSLPD E+E TL++G+ ++ V +AL
Sbjct: 101 HITMFNQLVAYLLNLDVKFEDEDLALMLVSSLPD-EFEHLETTLLHGKDNVSLDVVCSAL 159
Query: 216 VAYDARRKDKQSTHS-TSGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIG 40
+++ R++DK T S TS E L TRG ++ +RR KS+GR V KD+CAFC E G
Sbjct: 160 YSHELRKQDKMKTKSTTSEEALVTRGGQQSQTKERRGMCKSKGR--VVAKDECAFCHEKG 217
Query: 39 HWKKDCKKLKE 7
HWKKDC KL++
Sbjct: 218 HWKKDCPKLQK 228
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 137 bits (346), Expect = 3e-30
Identities = 79/191 (41%), Positives = 113/191 (59%), Gaps = 1/191 (0%)
Frame = -3
Query: 576 GVIRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSN 397
G IR+CL+++ KY +ETSA LW L K+L K+ +N F + G T++
Sbjct: 88 GTIRSCLSKEQKYAFKNETSAWKLWKALEGKFLKKSGQNKLLMKKILFRFDYQPGTTMNE 147
Query: 396 HMNTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAAL 217
H+ +L+ADL N+ DE AL+LLSSLPD E+E TL++G+ ++ V +AL
Sbjct: 148 HITIFNQLVADLLNLDVNFEDEDLALMLLSSLPD-EFEHLETTLLHGKENVSLDAVCSAL 206
Query: 216 VAYDARRKDKQSTH-STSGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIG 40
+ + R++DK+ + + E L RGR ++ RR SKS R V KD+CAFCRE G
Sbjct: 207 YSRELRKQDKKKKKVAAADEALVARGRQQSQSKGRRGWSKSISR---VAKDECAFCREKG 263
Query: 39 HWKKDCKKLKE 7
HWKKDC KLK+
Sbjct: 264 HWKKDCPKLKK 274
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 122 bits (305), Expect = 2e-25
Identities = 76/191 (39%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Frame = -3
Query: 576 GVIRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSN 397
G IR+CL+++ KY V +ETSA LW L DK+L K+V
Sbjct: 41 GTIRSCLSREQKYAVKNETSAHKLWKALEDKFLKKSV----------------------- 77
Query: 396 HMNTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAAL 217
K DE AL+LLSSLPDE +E TL++G+ ++ V +AL
Sbjct: 78 -----------------KFEDEDLALMLLSSLPDE-FEHLETTLLHGKENVSLDAVCSAL 119
Query: 216 VAYDARRKDKQSTHST-SGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIG 40
+++ R++DK T ST S E L RGR ++ +RR SKS+GR V KD+CAFC E G
Sbjct: 120 YSHELRKQDKMRTKSTTSEEALVIRGRQQSQTKERRGMSKSKGR--VVAKDECAFCHEKG 177
Query: 39 HWKKDCKKLKE 7
HWKKDC KL++
Sbjct: 178 HWKKDCPKLQK 188
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 121 bits (303), Expect = 3e-25
Identities = 75/191 (39%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Frame = -3
Query: 576 GVIRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSN 397
G IR+CL+++ KY V +ETSA LW L DK+L K+
Sbjct: 41 GTIRSCLSREQKYAVKNETSAHKLWKALEDKFLKKS------------------------ 76
Query: 396 HMNTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAAL 217
K DE AL+LLSSLPDE +E TL++G+ ++ V +AL
Sbjct: 77 ---------------DVKFEDEDLALMLLSSLPDE-FEHLETTLLHGKENVSLDVVCSAL 120
Query: 216 VAYDARRKDKQSTHST-SGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIG 40
+++ R++DK T ST S E L RGR ++ +RR SKS+GR +V KD+CAFC E G
Sbjct: 121 YSHELRKQDKMKTKSTTSEEALVARGRQQSQTKERRGMSKSKGR--AVAKDECAFCHEKG 178
Query: 39 HWKKDCKKLKE 7
HWKKDC KL++
Sbjct: 179 HWKKDCPKLQK 189
>gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 341
Score = 111 bits (278), Expect = 2e-22
Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 1/185 (0%)
Frame = -3
Query: 558 LAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHMNTLM 379
L ++ +V E +A LW L +Y+ K++ N M G ++ H++
Sbjct: 64 LGDEVLGEVSGEKTADKLWAKLESRYMTKSLHNRLCLKKQLYTMQMHEGESIHKHIDNFN 123
Query: 378 KLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALVAYDAR 199
+++ L N+ + DE +A++LLSSLP Y+ FV T+I GRSSL EV AL +++ +
Sbjct: 124 QVVLSLKNIDVAVDDEDQAVLLLSSLP-RAYDNFVDTIIFGRSSLSMEEVKTALQSWELK 182
Query: 198 RKDKQSTHST-SGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIGHWKKDC 22
R+ S T SGE L RGR R +R RSKSR ++ + ++C C++ GHWK++C
Sbjct: 183 RRITDSYGGTSSGEGLMVRGRMDERKSFQRRRSKSRSKNKN--NNKCHNCQKEGHWKRNC 240
Query: 21 KKLKE 7
+LK+
Sbjct: 241 PELKK 245
>gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 344
Score = 111 bits (277), Expect = 3e-22
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 1/185 (0%)
Frame = -3
Query: 558 LAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHMNTLM 379
L ++ ++ E +A LW L +Y+ K++ N M G ++ H++
Sbjct: 67 LGDEVLGEISGEKTADKLWAKLESRYMTKSLHNRLCLKKQLYTMQMHEGESIHKHIDNFN 126
Query: 378 KLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALVAYDAR 199
+++ L N+ + DE +A++LLSSLP Y+ FV T+I GRSSL EV AL +++ +
Sbjct: 127 QVVLSLKNIDVAVDDEDQAVLLLSSLP-RAYDNFVDTIIFGRSSLSMEEVKTALQSWELK 185
Query: 198 RKDKQSTHST-SGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIGHWKKDC 22
R+ S T SGE L RGR R +R RSKSR ++ + ++C C++ GHWK++C
Sbjct: 186 RRITDSYGGTSSGEGLMVRGRMDERKSFQRRRSKSRSKNKN--NNKCHNCQKEGHWKRNC 243
Query: 21 KKLKE 7
+LK+
Sbjct: 244 PELKK 248
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 109 bits (272), Expect = 1e-21
Identities = 65/188 (34%), Positives = 94/188 (50%)
Frame = -3
Query: 570 IRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHM 391
I CLA D+ +V DE +A LW L Y+ K++ N M G L H+
Sbjct: 60 IMLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHL 119
Query: 390 NTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALVA 211
L LL +L N+ KI DE AL+LL SLP +E FV + I G+ ++ EV +AL +
Sbjct: 120 EQLNTLLLELRNIDVKIEDEDAALILLVSLP-MSFENFVQSFIVGKDTVSLEEVRSALHS 178
Query: 210 YDARRKDKQSTHSTSGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIGHWK 31
+ R K ++ L T R + G ++N+ S+G + D C +C+E GHWK
Sbjct: 179 RELRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKG---AKPDDVCNYCKEKGHWK 235
Query: 30 KDCKKLKE 7
DC K K+
Sbjct: 236 FDCPKKKK 243
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 108 bits (270), Expect = 2e-21
Identities = 61/188 (32%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Frame = -3
Query: 570 IRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHM 391
IR L+ D+ +++DE +A+ +W L Y+ KT+ N HM G +H+
Sbjct: 63 IRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHL 122
Query: 390 NTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALVA 211
N L+ LAN+G KI +E KA++LL+SLP Y+ T+++G+++++ +V++AL+
Sbjct: 123 NVFNGLITQLANLGVKIEEEDKAILLLNSLP-SSYDNLATTILHGKTTIELKDVTSALLL 181
Query: 210 YDARRKDKQSTHSTSGEVLST--RGRSPNRGGDRRNRSKSRGRHHSVGKDQ---CAFCRE 46
+ RK ++ G+ L T RGRS R + RS +RG+ + K + C C +
Sbjct: 182 NEKMRKKPEN----QGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQ 237
Query: 45 IGHWKKDC 22
GH+K+DC
Sbjct: 238 PGHFKRDC 245
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 108 bits (269), Expect = 3e-21
Identities = 68/192 (35%), Positives = 102/192 (53%), Gaps = 5/192 (2%)
Frame = -3
Query: 570 IRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHM 391
IR L D+ +++DE SA +W L + Y+ KT+ N HM G +H+
Sbjct: 64 IRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYTLHMDEGTNFLSHL 123
Query: 390 NTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALVA 211
N L L+ LAN+G KI +E K +VLL+SLP Y+T T+++G+ S++ +V++AL+
Sbjct: 124 NVLNGLITQLANLGVKIEEEDKRIVLLNSLP-SSYDTLSTTILHGKDSIQLKDVTSALLL 182
Query: 210 YDARRKDKQSTHSTSGEVLST--RGRSPNRGGDRRNRSKSRGRHHSVGKDQ---CAFCRE 46
+ RK K H G+V T RGRS R RS +RG+ K + C C +
Sbjct: 183 NEKMRK-KPENH---GQVFITESRGRSYQRSSSNYGRSGARGKSKVRSKSKARNCYNCDQ 238
Query: 45 IGHWKKDCKKLK 10
GH+K+DC K
Sbjct: 239 PGHFKRDCPNPK 250
>ref|XP_009378155.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Pyrus x
bretschneideri]
Length = 670
Score = 102 bits (254), Expect = 1e-19
Identities = 67/187 (35%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Frame = -3
Query: 570 IRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHM 391
IR C+A ++ +VMDE A LW+ L Y+ K++ N M G L +HM
Sbjct: 42 IRHCIADNIINNVMDEDFAPALWEKLEKLYIAKSLTNKLHLKKKLYKLKMDEGGNLMDHM 101
Query: 390 NTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALVA 211
N L L V K+ +E KAL+LL+SLPD YE V TL++G+ ++ +V A+LV+
Sbjct: 102 NVFNGYLDQLRKVDVKVEEEDKALLLLTSLPD-SYENLVTTLLHGKDTVSLEQVQASLVS 160
Query: 210 YDARRKDK--QSTHSTSGEVLS-TRGRSPNRGGDRRNRSKSRGRHHSVGK-DQCAFCREI 43
YD +++ H T+ V GR G +R +R KS S GK QC C+E
Sbjct: 161 YDTQKRKTIVDGGHETALAVQGWNHGRKLGGGFERDSRFKS----SSKGKGPQCYDCKEF 216
Query: 42 GHWKKDC 22
GH + +C
Sbjct: 217 GHKRINC 223
>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
superfamily protein [Theobroma cacao]
Length = 1029
Score = 100 bits (249), Expect = 5e-19
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
Frame = -3
Query: 573 VIRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNH 394
VI L+ ++ +V DE SA +W L Y+ K++ N M G +++ H
Sbjct: 186 VILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTH 245
Query: 393 MNTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALV 214
++ +++ DL N+ KI DE AL+LL LP YE FV T++ GR +L F +V A+L
Sbjct: 246 IDEFNRVILDLKNIDVKIEDEDLALILLCYLPPS-YENFVDTMLYGRDTLTFEDVRASLN 304
Query: 213 AYDARRKDKQSTHSTSGE-VLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIGH 37
+ ++K + E ++ RGR +G DR+ +S+++G+ C C + GH
Sbjct: 305 FKELKKKVGGIRNENQAEGLVVNRGRGKEKGLDRKGKSRAKGK-------TCWNCGQKGH 357
Query: 36 WKKDCKKLKE 7
+++DC K K+
Sbjct: 358 FRQDCTKFKD 367
>ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
gi|508717229|gb|EOY09126.1| Uncharacterized protein
TCM_024518 [Theobroma cacao]
Length = 277
Score = 97.8 bits (242), Expect = 3e-18
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 1/185 (0%)
Frame = -3
Query: 558 LAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHMNTLM 379
L+ ++ +V DE SA +W L Y+ K++ N M G +++ H++
Sbjct: 69 LSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHIDEFN 128
Query: 378 KLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALVAYDAR 199
+++ DL N+ KI DE AL+LL LP YE FV T++ GR +L F +V A L + + +
Sbjct: 129 RVILDLKNIDVKIEDEDLALILLCYLPPS-YENFVDTMLYGRDTLTFEDVRAYLNSKELK 187
Query: 198 RKDKQSTHSTSGE-VLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIGHWKKDC 22
+K + E ++ RGR +G D++ +S+++G+ C C + GH+++DC
Sbjct: 188 KKVGGIRNENQAEGLVVNRGRGKEKGLDKKGKSRAKGK-------TCWNCGQKGHFRQDC 240
Query: 21 KKLKE 7
K K+
Sbjct: 241 TKFKD 245
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 96.3 bits (238), Expect = 1e-17
Identities = 56/189 (29%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Frame = -3
Query: 570 IRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHM 391
IR L+ + Y VMDE S K +WD L+ ++ K++ + ++ L H+
Sbjct: 64 IRLSLSDSVMYQVMDEKSPKEIWDKLASLHMSKSLTSKLYLKQQLYGLQVQEESDLRKHV 123
Query: 390 NTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALVA 211
+ +L+ DL+ + K+ DE KA++LL SLP YE V TL +G+ ++K E+ ++L+A
Sbjct: 124 DVFNQLVVDLSKLDVKLDDEDKAIILLCSLP-LSYEHVVTTLTHGKDTVKTEEIISSLLA 182
Query: 210 YDARR-KDKQSTHSTSGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIGHW 34
D RR K ++T ++ G+ L + + + G +++ K +C C E GH
Sbjct: 183 RDLRRSKKNEATKASQGKSLLVKDKHDHEAGVSKSKEKGA---------RCYKCHEFGHI 233
Query: 33 KKDCKKLKE 7
+++C LK+
Sbjct: 234 RRNCPLLKK 242
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 95.9 bits (237), Expect = 1e-17
Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 4/193 (2%)
Frame = -3
Query: 576 GVIRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSN 397
G IR + ++ + T A++LWD L + Y KT N G T+++
Sbjct: 59 GYIRQFVEDNVYNHISGVTHARSLWDKLEELYASKTGNNKLFYLTKLMQVKYVEGTTVAD 118
Query: 396 HMNTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSS--LKFHEVSA 223
H+N + ++ L+ +G K DE AL++L++LP E +ET +++ N + + V +
Sbjct: 119 HLNEIQGIVDQLSGMGIKFDDEVLALMVLATLP-ESWETLKVSITNSAPNGVVNMETVKS 177
Query: 222 ALVAYDARRKDKQSTHSTSGEVL--STRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCR 49
++ + RR+ Q T S+ EVL +TRGRS N+ + NR KSRG+ + +C +C+
Sbjct: 178 GILNEEMRRR-SQGTSSSQSEVLAVTTRGRSQNK--SQSNRDKSRGKSNKFANVECHYCK 234
Query: 48 EIGHWKKDCKKLK 10
+ GH K+ C++ +
Sbjct: 235 KKGHIKRFCRQFQ 247
>gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryza sativa Japonica
Group] gi|108706491|gb|ABF94286.1| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 556
Score = 95.5 bits (236), Expect = 2e-17
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Frame = -3
Query: 573 VIRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNH 394
+IR L+ + Y VMDE + K +WD L+ Y+ K++ + M+ L H
Sbjct: 194 IIRLSLSDFVMYQVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKH 253
Query: 393 MNTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALV 214
++ +L+ DL+ + K+ DE KA++LL SLP +E V TL +G+ ++K E+ ++L+
Sbjct: 254 VDVFNQLVVDLSKLDVKLDDEDKAIILLCSLP-PSFEHVVTTLTHGKDTVKTEEIISSLL 312
Query: 213 AYDARR-KDKQSTHSTSGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIGH 37
A D RR K ++ ++ E L + + + G +++ K +C C E GH
Sbjct: 313 ARDLRRSKKNEAMEASQAESLLVKAKHDHEAGVSKSKEKGA---------RCYKCHEFGH 363
Query: 36 WKKDCKKLKE 7
+++C LK+
Sbjct: 364 IRRNCPLLKK 373
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 95.5 bits (236), Expect = 2e-17
Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Frame = -3
Query: 570 IRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHM 391
+ LA + V ++ +AK +WD L+ Y K++ N M +++H+
Sbjct: 58 LHLALADGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHI 117
Query: 390 NTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGR--SSLKFHEVSAAL 217
NTL L + L +G I + +A +LL SLPD Y+ ++ L N SL F +V+A++
Sbjct: 118 NTLKTLFSQLTTLGHNIEENERAELLLQSLPD-SYDQLIINLTNNNPVESLVFDDVAASV 176
Query: 216 VAYDARRKDKQSTHSTS--GEVLS-TRGRSPNR---GGDRRNRSKSRGRHHSVGKDQCAF 55
+ ++RRK+K++ ++S E LS TRGRS R G + RSK RG+ + +C
Sbjct: 177 LNEESRRKNKENRQASSQQAEALSVTRGRSTERGPSGSQNQGRSKFRGKKNV----KCYN 232
Query: 54 CREIGHWKKDC 22
C + GH KK+C
Sbjct: 233 CGKKGHVKKEC 243
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 95.1 bits (235), Expect = 2e-17
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 8/191 (4%)
Frame = -3
Query: 570 IRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHM 391
+ LA + V ++ +AK +WD L+ Y K++ N M +++H+
Sbjct: 58 LHLALADGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHI 117
Query: 390 NTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGR--SSLKFHEVSAAL 217
NTL L + L +G I + +A +LL SLPD Y+ ++ L N SL F +V+A++
Sbjct: 118 NTLKTLFSQLTTLGHNIEENERAELLLQSLPD-SYDQLIINLTNNNPVDSLVFDDVAASV 176
Query: 216 VAYDARRKDKQSTHSTS--GEVLS-TRGRSPNR---GGDRRNRSKSRGRHHSVGKDQCAF 55
+ ++RRK+K++ ++S E LS TRGRS R G RSKSR + + +C
Sbjct: 177 LNEESRRKNKENRQASSQQAEALSVTRGRSTERGPSGSQNHGRSKSRSKKNV----KCYN 232
Query: 54 CREIGHWKKDC 22
C + GH KK+C
Sbjct: 233 CGKKGHVKKEC 243
>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 94.4 bits (233), Expect = 4e-17
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Frame = -3
Query: 558 LAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHMNTLM 379
LA ++ +V DET+A LW KY K++ N M G+ + +H+N
Sbjct: 67 LADEVLREVADETTAVGLWRKFESKYQKKSLTNRLYQKRQLHTLKMSEGMQVRDHLNNFN 126
Query: 378 KLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALVAYDAR 199
+++ DL VG K+ +E +A++LL SLP YE FV T++ GR S+ ++V AL + + +
Sbjct: 127 RIILDLNGVGVKVEEEDQAMILLCSLP-SSYENFVDTMMYGRBSISXNDVKDALQSKELQ 185
Query: 198 RKDKQSTH-STSGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIGHWKKDC 22
+ S S + +RGRS R G R++S S+ S +C +E GH++K+C
Sbjct: 186 KLVSGSEEGSVETGLTVSRGRSMERNGGGRSKSXSK----SKAAMRCFHXKEKGHFRKNC 241
Query: 21 KKLKEVI 1
+ ++ I
Sbjct: 242 PQRQKGI 248
>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 425
Score = 94.0 bits (232), Expect = 5e-17
Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
Frame = -3
Query: 570 IRTCLAQDLKYDVMDETSAKTLWDYLSDKYLVKTVENXXXXXXXXXXFHMKRGVTLSNHM 391
IR L+ + Y VMDE + K +WD L+ Y+ K++ + M+ L H+
Sbjct: 64 IRLSLSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHV 123
Query: 390 NTLMKLLADLANVGEKISDEYKALVLLSSLPDEEYETFVLTLINGRSSLKFHEVSAALVA 211
+ +L+ DL+ + K+ DE A++LL SLP YE V TL++G+ ++K E ++L+A
Sbjct: 124 DVFNQLVVDLSKLDVKLDDEDMAIILLCSLP-PSYEHVVTTLMHGKDTVKTEEKISSLLA 182
Query: 210 YDARRKDK-QSTHSTSGEVLSTRGRSPNRGGDRRNRSKSRGRHHSVGKDQCAFCREIGHW 34
D RR +K ++ ++ E L + + + G +++ K +C C E GH
Sbjct: 183 RDLRRSNKNEAMEASQAESLLVKAKHDHEAGVSKSKDKGA---------RCYKCHEFGHI 233
Query: 33 KKDCKKLKE 7
+++C LK+
Sbjct: 234 RRNCPLLKK 242