BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00017212
         (2461 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010904633.1| PREDICTED: DNA-directed RNA polymerase 3B, c...  1296   0.0  
ref|XP_009400360.1| PREDICTED: DNA-directed RNA polymerase 3B, c...  1294   0.0  
ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1262   0.0  
ref|XP_010904634.1| PREDICTED: DNA-directed RNA polymerase 3B, c...  1251   0.0  
emb|CBI36559.3| unnamed protein product [Vitis vinifera]             1251   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1251   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1226   0.0  
ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1224   0.0  
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1219   0.0  
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...  1215   0.0  
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...  1215   0.0  
gb|KDO62286.1| hypothetical protein CISIN_1g001795mg [Citrus sin...  1212   0.0  
ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1212   0.0  
gb|KDO62285.1| hypothetical protein CISIN_1g001795mg [Citrus sin...  1211   0.0  
ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof...  1211   0.0  
ref|XP_012071554.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1210   0.0  
gb|KDP38713.1| hypothetical protein JCGZ_04066 [Jatropha curcas]     1210   0.0  
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...  1210   0.0  
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...  1209   0.0  
gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium r...  1209   0.0  

>ref|XP_010904633.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X1
            [Elaeis guineensis]
          Length = 894

 Score = 1296 bits (3355), Expect = 0.0
 Identities = 630/798 (78%), Positives = 706/798 (88%), Gaps = 1/798 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVKSLFLGWFEPLRDAI KEQ  Q+ +  KAAYA HIGLLPADKMAVIVMHK MGLLMTG
Sbjct: 97   YVKSLFLGWFEPLRDAIEKEQMLQKTKRQKAAYALHIGLLPADKMAVIVMHKMMGLLMTG 156

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKK-SKRNNEVDINAVFSKEQEIKRKHVL 2105
            QEEGCVRVVQAAIH+GEAIE E KIH++LEKTK+  +R N+ + + + ++ Q   RK V 
Sbjct: 157  QEEGCVRVVQAAIHIGEAIEHEFKIHTYLEKTKRPGRRKNQEEKDVILNQGQGNLRKKVT 216

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
            K +KMKKL  VQKL+KNE  ++ WGRDAQAKLGSRLIELLIESAFVQ P  Q   S P+I
Sbjct: 217  KLIKMKKLIEVQKLVKNEIELDSWGRDAQAKLGSRLIELLIESAFVQSPPKQLIDSLPDI 276

Query: 1924 RPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGYD 1745
            RPAFRH+FK V KEDGKL++K+GVIECD LV +GLDSTARH+VIPYLPMLIPPK WKGYD
Sbjct: 277  RPAFRHSFKAVAKEDGKLRNKYGVIECDPLVQKGLDSTARHVVIPYLPMLIPPKNWKGYD 336

Query: 1744 KGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEIM 1565
            KGGHL++PSYVMRTHG+K+QQDAIKS P+KQL+KVF+ALD LGSTKWRVNR +LDV+E +
Sbjct: 337  KGGHLFLPSYVMRTHGAKDQQDAIKSVPRKQLQKVFKALDILGSTKWRVNRPILDVVEGI 396

Query: 1564 WSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLSV 1385
            WS+GG +AGL+DR DIP+PER +SED   I++WRW  RK KK NNEMHAQRCD ELKLSV
Sbjct: 397  WSKGGGIAGLVDRVDIPVPERSDSEDSVEIRKWRWRVRKVKKANNEMHAQRCDTELKLSV 456

Query: 1384 ARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKIH 1205
            ARKM+DEEGFYYPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGRPLGKSGLRWLKIH
Sbjct: 457  ARKMRDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIH 516

Query: 1204 LANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLSD 1025
            LAN+YGGGV KLSYDGRL FVENH+ +IFDSA NP+ G  WW+NAEDPFQCLAAC+NLSD
Sbjct: 517  LANLYGGGVGKLSYDGRLAFVENHLHDIFDSAANPIEGDRWWLNAEDPFQCLAACINLSD 576

Query: 1024 ALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAARV 845
            AL+S SP   ISH+PIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEKP DVYSGIAARV
Sbjct: 577  ALKSSSPTEAISHIPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPGDVYSGIAARV 636

Query: 844  LDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVER 665
            +DIM KDS +DP T+PTALLAK L+DQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL E+
Sbjct: 637  MDIMRKDSARDPTTNPTALLAKALVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEK 696

Query: 664  GQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLGL 485
            G ITDDR+LF+ASCYAAKVTL++LGEMFQAARSIMKWL DCAKVIASE++PVRWTTPLGL
Sbjct: 697  GLITDDRLLFTASCYAAKVTLDALGEMFQAARSIMKWLADCAKVIASEDQPVRWTTPLGL 756

Query: 484  PVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIACR 305
            PVVQPY+N ERHLIRTSLQVLALQREGHSV+VK QK+AFPPNFVHSLDGSHMMMTAI+C+
Sbjct: 757  PVVQPYKNCERHLIRTSLQVLALQREGHSVSVKRQKSAFPPNFVHSLDGSHMMMTAISCK 816

Query: 304  KAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXXP 125
             AGL FAGVHDSFWTHACDVDRMN+ILREQFVELY++P+LENL E FQTS         P
Sbjct: 817  NAGLHFAGVHDSFWTHACDVDRMNQILREQFVELYNIPILENLLEDFQTSFPTLSFPPLP 876

Query: 124  KRGNFNLREVIESPYFFN 71
             RGNF+L++V+ SPYFFN
Sbjct: 877  DRGNFDLKKVLGSPYFFN 894


>ref|XP_009400360.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic [Musa
            acuminata subsp. malaccensis]
          Length = 809

 Score = 1294 bits (3348), Expect = 0.0
 Identities = 620/798 (77%), Positives = 708/798 (88%), Gaps = 1/798 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVKSLFLGWFEPLRD I +EQR Q+ +  KAAYA HIGLLPADKMAVIVMHK MGLLM G
Sbjct: 12   YVKSLFLGWFEPLRDVIEREQRLQKTKMQKAAYAPHIGLLPADKMAVIVMHKMMGLLMVG 71

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRN-NEVDINAVFSKEQEIKRKHVL 2105
            QE+GC+R+VQAAI +GEAIEQE KI ++LEK+K+ +R  NE D N +   +QEI RK V+
Sbjct: 72   QEDGCIRLVQAAIRIGEAIEQEFKIQAYLEKSKRPRRRKNEGDRNVILCTQQEILRKKVM 131

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
            K +KMKKL  VQKLL+NE  ME WGRD QAKLGSRLIELL+ESAFVQ P D  A  PPEI
Sbjct: 132  KLIKMKKLIEVQKLLRNEIEMESWGRDGQAKLGSRLIELLLESAFVQVPCDSLADCPPEI 191

Query: 1924 RPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGYD 1745
             PAFRHTFK ++KE+GK  +++GVIECD LVH+G DSTARHMVIPYLPMLIPPK WKGYD
Sbjct: 192  LPAFRHTFKNISKENGKSINRYGVIECDPLVHKGFDSTARHMVIPYLPMLIPPKSWKGYD 251

Query: 1744 KGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEIM 1565
             GGHL++PSYVMRTHG++EQQ AIKS P+KQL+KVFEALDTLG TKWR+NRR+LDV+EI+
Sbjct: 252  NGGHLFLPSYVMRTHGAQEQQKAIKSVPRKQLQKVFEALDTLGRTKWRINRRILDVIEIV 311

Query: 1564 WSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLSV 1385
            WSRGG +AGL+DR+DI +P+RPE+EDLT IK+WRW++RKAKK N+EMHAQRCD+ELKLSV
Sbjct: 312  WSRGGGIAGLVDRKDIQLPDRPETEDLTEIKKWRWSTRKAKKANSEMHAQRCDVELKLSV 371

Query: 1384 ARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKIH 1205
            A KM+DEEGFYYPHN+DFRGRAYPMHSHLNHLSSD+CRGILEFAEG+PLGKSGL WLKIH
Sbjct: 372  AHKMRDEEGFYYPHNIDFRGRAYPMHSHLNHLSSDLCRGILEFAEGKPLGKSGLHWLKIH 431

Query: 1204 LANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLSD 1025
            LANIYGGGVEKLSYD RL FV+NH+R+IFDSA+NP++G  WWI+AEDPFQCLAAC++L+ 
Sbjct: 432  LANIYGGGVEKLSYDRRLTFVKNHLRDIFDSAENPIDGNRWWISAEDPFQCLAACIDLTK 491

Query: 1024 ALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAARV 845
            AL+S SPH  ISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEKPADVYS IA RV
Sbjct: 492  ALKSSSPHMAISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAMRV 551

Query: 844  LDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVER 665
             +I+ KDS+KDP  DPTALLAKVL+DQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+
Sbjct: 552  REIIRKDSEKDPTVDPTALLAKVLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEK 611

Query: 664  GQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLGL 485
            G ITDDR+LF ASCYAAKVTLN+LGEMF+AAR IMKWLGDCAK+IASENEPV+WTTPLGL
Sbjct: 612  GLITDDRLLFGASCYAAKVTLNALGEMFEAARGIMKWLGDCAKIIASENEPVKWTTPLGL 671

Query: 484  PVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIACR 305
            PVVQPYRNSERH IRTSLQVL LQREG SV+VK QKTAFPPN+VHSLDGSHMMMTAI+C+
Sbjct: 672  PVVQPYRNSERHQIRTSLQVLTLQREGQSVSVKRQKTAFPPNYVHSLDGSHMMMTAISCK 731

Query: 304  KAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXXP 125
             AGL FAGVHDSFWTHACDVDRMN+ILRE+FV LY++P+LENL + FQTS         P
Sbjct: 732  NAGLHFAGVHDSFWTHACDVDRMNQILREEFVALYNIPILENLLDGFQTSFPTLTFPPLP 791

Query: 124  KRGNFNLREVIESPYFFN 71
             RG+F+L++V+ESPYFFN
Sbjct: 792  DRGDFDLKKVLESPYFFN 809


>ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 956

 Score = 1262 bits (3266), Expect = 0.0
 Identities = 617/800 (77%), Positives = 701/800 (87%), Gaps = 3/800 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVKSLFLGWFEPLR+AI KEQ+ QE++  KAAYA +IGLLPADKMAVIVMHK MGLLMTG
Sbjct: 157  YVKSLFLGWFEPLREAIEKEQKLQESKKQKAAYAPYIGLLPADKMAVIVMHKMMGLLMTG 216

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEVDINA--VFSKEQEIKRKHV 2108
            QEEG VRVVQAA+H+GEAIEQEV+IH+FL+KTKK +   +++       +KEQ+I RK V
Sbjct: 217  QEEGYVRVVQAAVHIGEAIEQEVRIHNFLKKTKKYQGGKKIEGQGDDKVTKEQDILRKRV 276

Query: 2107 LKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPE 1928
               VK KKL  VQKL+KNEN + PWGRDAQAKLGSRLIELL E+A+VQPP++Q   SP E
Sbjct: 277  NILVKKKKLIEVQKLVKNENEIRPWGRDAQAKLGSRLIELLTETAYVQPPINQLGDSPRE 336

Query: 1927 IRPAFRHTFKTVTKEDGKLKSK-FGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKG 1751
            IRPAFRHTF+T++KE G+   K +GVIECD LV +GLD TARHMVIPY+PMLIPPKKWKG
Sbjct: 337  IRPAFRHTFRTLSKETGRRVGKRYGVIECDPLVGRGLDRTARHMVIPYVPMLIPPKKWKG 396

Query: 1750 YDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLE 1571
            YDKGGHL++PSYVMRTHG+K QQDAIK+ P KQ++KVFEALDTLG TKWRVNR+VL V+E
Sbjct: 397  YDKGGHLFLPSYVMRTHGAKRQQDAIKNVPGKQMQKVFEALDTLGRTKWRVNRKVLGVVE 456

Query: 1570 IMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKL 1391
             +W+RGGN+AGL+DREDIPIPE+P+SEDL  +++W+WN RK KK N E HAQRCDIELKL
Sbjct: 457  SIWARGGNMAGLVDREDIPIPEKPDSEDLIEMQKWKWNMRKTKKINRERHAQRCDIELKL 516

Query: 1390 SVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLK 1211
            SVARK+KDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGK+GLRWLK
Sbjct: 517  SVARKIKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLK 576

Query: 1210 IHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNL 1031
            IHLAN+Y GGV+KLSYD RL+FVENH+ +IFDSAD P++G  WW+NAEDPFQCLAAC+NL
Sbjct: 577  IHLANLYAGGVDKLSYDDRLDFVENHLDDIFDSADKPIDGNRWWLNAEDPFQCLAACINL 636

Query: 1030 SDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAA 851
            S+AL+S SPH+ ISHLPIHQDGSCNGLQHYAALGR  LEAAAVNLVAGEKPADVYS IAA
Sbjct: 637  SEALKSSSPHTAISHLPIHQDGSCNGLQHYAALGRYQLEAAAVNLVAGEKPADVYSEIAA 696

Query: 850  RVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLV 671
            RV  IM  D++KDP TDPTALLAKVLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL 
Sbjct: 697  RVHSIMKMDAEKDPTTDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLE 756

Query: 670  ERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPL 491
            E+G IT+DR+LFSA+CYAAKVTL +L EMFQAARSIM WL DCAKVIASEN+PVRWTTPL
Sbjct: 757  EKGHITNDRLLFSAACYAAKVTLTALEEMFQAARSIMGWLSDCAKVIASENQPVRWTTPL 816

Query: 490  GLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIA 311
            GLPVVQPY   +RHL+RTSLQVLALQREG  V VK Q+TAFPPNFVHSLDGSHMMMTA+A
Sbjct: 817  GLPVVQPYLKPQRHLVRTSLQVLALQREGDLVEVKRQRTAFPPNFVHSLDGSHMMMTAVA 876

Query: 310  CRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXX 131
            CR AGL FAGVHDSFWTHACDVDRMN+ILRE+FVELYD+P+LE L ESFQ S        
Sbjct: 877  CRDAGLHFAGVHDSFWTHACDVDRMNQILREKFVELYDMPILERLLESFQVSFPLLTFPP 936

Query: 130  XPKRGNFNLREVIESPYFFN 71
             P RG+F+L+EV+ESPYFFN
Sbjct: 937  LPDRGDFDLKEVLESPYFFN 956


>ref|XP_010904634.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X2
            [Elaeis guineensis]
          Length = 877

 Score = 1251 bits (3236), Expect = 0.0
 Identities = 614/798 (76%), Positives = 689/798 (86%), Gaps = 1/798 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVKSLFLGWFEPLRDAI KEQ  Q+ +  KAAYA HIGLLPADKMAVIVMHK MGLLMTG
Sbjct: 97   YVKSLFLGWFEPLRDAIEKEQMLQKTKRQKAAYALHIGLLPADKMAVIVMHKMMGLLMTG 156

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKK-SKRNNEVDINAVFSKEQEIKRKHVL 2105
            QEEGCVRVVQAAIH+GEAIE E KIH++LEKTK+  +R N+ + + + ++ Q   RK V 
Sbjct: 157  QEEGCVRVVQAAIHIGEAIEHEFKIHTYLEKTKRPGRRKNQEEKDVILNQGQGNLRKKVT 216

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
            K +KMKKL  VQKL+KNE  ++ WGRDAQAKLGSRLIELLIESAFVQ P  Q   S P+I
Sbjct: 217  KLIKMKKLIEVQKLVKNEIELDSWGRDAQAKLGSRLIELLIESAFVQSPPKQLIDSLPDI 276

Query: 1924 RPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGYD 1745
            RPAFRH+FK V KEDGKL++K+GVIECD LV +GLDSTARH+VIPYLPMLIPPK WKGYD
Sbjct: 277  RPAFRHSFKAVAKEDGKLRNKYGVIECDPLVQKGLDSTARHVVIPYLPMLIPPKNWKGYD 336

Query: 1744 KGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEIM 1565
            KGGHL++PSYVMRTHG+K+QQDAIKS P+KQL+KVF+ALD LGSTKWRVNR +LDV+E +
Sbjct: 337  KGGHLFLPSYVMRTHGAKDQQDAIKSVPRKQLQKVFKALDILGSTKWRVNRPILDVVEGI 396

Query: 1564 WSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLSV 1385
            WS+GG +AGL+DR DIP+PER +SED   I++WRW  RK KK NNEMHAQRCD ELKLSV
Sbjct: 397  WSKGGGIAGLVDRVDIPVPERSDSEDSVEIRKWRWRVRKVKKANNEMHAQRCDTELKLSV 456

Query: 1384 ARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKIH 1205
            ARKM+DEEGFYYPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGRPLGKSGLRWLKIH
Sbjct: 457  ARKMRDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIH 516

Query: 1204 LANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLSD 1025
            LAN+YGGGV KLSYDGRL FVENH+ +IFDSA NP+ G  WW+NAEDPFQCLAAC+NLSD
Sbjct: 517  LANLYGGGVGKLSYDGRLAFVENHLHDIFDSAANPIEGDRWWLNAEDPFQCLAACINLSD 576

Query: 1024 ALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAARV 845
            AL+S SP   ISH+PIHQ                 LEAAAVNLVAGEKP DVYSGIAARV
Sbjct: 577  ALKSSSPTEAISHIPIHQ-----------------LEAAAVNLVAGEKPGDVYSGIAARV 619

Query: 844  LDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVER 665
            +DIM KDS +DP T+PTALLAK L+DQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL E+
Sbjct: 620  MDIMRKDSARDPTTNPTALLAKALVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEK 679

Query: 664  GQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLGL 485
            G ITDDR+LF+ASCYAAKVTL++LGEMFQAARSIMKWL DCAKVIASE++PVRWTTPLGL
Sbjct: 680  GLITDDRLLFTASCYAAKVTLDALGEMFQAARSIMKWLADCAKVIASEDQPVRWTTPLGL 739

Query: 484  PVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIACR 305
            PVVQPY+N ERHLIRTSLQVLALQREGHSV+VK QK+AFPPNFVHSLDGSHMMMTAI+C+
Sbjct: 740  PVVQPYKNCERHLIRTSLQVLALQREGHSVSVKRQKSAFPPNFVHSLDGSHMMMTAISCK 799

Query: 304  KAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXXP 125
             AGL FAGVHDSFWTHACDVDRMN+ILREQFVELY++P+LENL E FQTS         P
Sbjct: 800  NAGLHFAGVHDSFWTHACDVDRMNQILREQFVELYNIPILENLLEDFQTSFPTLSFPPLP 859

Query: 124  KRGNFNLREVIESPYFFN 71
             RGNF+L++V+ SPYFFN
Sbjct: 860  DRGNFDLKKVLGSPYFFN 877


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 1251 bits (3236), Expect = 0.0
 Identities = 605/798 (75%), Positives = 699/798 (87%), Gaps = 1/798 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVK+LFLGWFEPLR+AI KEQRAQ  +  KAAYA HI LLPADKMAVIVMHK MGL+M G
Sbjct: 12   YVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMMG 71

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIKRKHVLK 2102
             EEGCVRVVQAA+ +G AIEQEV+IHSFLEKTK  +R+  V  +    +E+EI RK V  
Sbjct: 72   HEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQEGLREKEILRKRVKS 131

Query: 2101 SVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEIR 1922
             ++ KK+  VQKL+KNE  + PWGRD QAKLGSRLIELL E+A+VQ P++QSA  PP++R
Sbjct: 132  FIRKKKIIEVQKLVKNEE-ITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVR 190

Query: 1921 PAFRHTFKTVTKEDGKLK-SKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGYD 1745
            PAFRHTFKTVTKE G+    K+GVIECD LV  GLD TA+HMVIPY+PMLIPPKKWKGYD
Sbjct: 191  PAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYD 250

Query: 1744 KGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEIM 1565
            KGG+L++PSYVMRTHGS++QQDA+KS P++QL+KVFEALDTLG+TKWR+NRRVL V+E +
Sbjct: 251  KGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESI 310

Query: 1564 WSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLSV 1385
            W+RGGN+ GL+DRE++P+PE+P +EDLT I+ W+WN+RKAKK N E H+ RCD E+KLSV
Sbjct: 311  WARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSV 370

Query: 1384 ARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKIH 1205
            ARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGKSGLRWLKI 
Sbjct: 371  ARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQ 430

Query: 1204 LANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLSD 1025
            LAN+Y GGVEKLSYDGRL FV+NH+ ++FDSADNP+NG  WW+ AEDPFQCLAAC+NLS+
Sbjct: 431  LANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSE 490

Query: 1024 ALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAARV 845
            ALRS SPH+VISHLPIHQDGSCNGLQHYAALGR++LEA+AVNLVAGEKPADVYS IAARV
Sbjct: 491  ALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARV 550

Query: 844  LDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVER 665
             +IM +DS KDPATDP ALLAKVLI QVDRKLVKQTVMTSVYGVT++GAREQIKRRL E+
Sbjct: 551  HEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEK 610

Query: 664  GQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLGL 485
            G ITD+R+LF+A+CYAAKVTL +LGE+FQAAR IM WLG+CAKVIASEN+PV+WTTPLGL
Sbjct: 611  GLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGL 670

Query: 484  PVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIACR 305
            PV+QPY  SERHLIRTSLQVLALQREG  V ++ Q+TAFPPNFVHSLDGSHMMMTA+ACR
Sbjct: 671  PVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACR 730

Query: 304  KAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXXP 125
             AGL FAGVHDSFWTHACDVD+MN+ILRE+FVELY +P+LENL ESFQTS         P
Sbjct: 731  DAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLP 790

Query: 124  KRGNFNLREVIESPYFFN 71
             RGNF+LREV+ESPYFFN
Sbjct: 791  DRGNFDLREVLESPYFFN 808


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 1251 bits (3236), Expect = 0.0
 Identities = 605/798 (75%), Positives = 699/798 (87%), Gaps = 1/798 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVK+LFLGWFEPLR+AI KEQRAQ  +  KAAYA HI LLPADKMAVIVMHK MGL+M G
Sbjct: 183  YVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMMG 242

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIKRKHVLK 2102
             EEGCVRVVQAA+ +G AIEQEV+IHSFLEKTK  +R+  V  +    +E+EI RK V  
Sbjct: 243  HEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQEGLREKEILRKRVKS 302

Query: 2101 SVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEIR 1922
             ++ KK+  VQKL+KNE  + PWGRD QAKLGSRLIELL E+A+VQ P++QSA  PP++R
Sbjct: 303  FIRKKKIIEVQKLVKNEE-ITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVR 361

Query: 1921 PAFRHTFKTVTKEDGKLK-SKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGYD 1745
            PAFRHTFKTVTKE G+    K+GVIECD LV  GLD TA+HMVIPY+PMLIPPKKWKGYD
Sbjct: 362  PAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYD 421

Query: 1744 KGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEIM 1565
            KGG+L++PSYVMRTHGS++QQDA+KS P++QL+KVFEALDTLG+TKWR+NRRVL V+E +
Sbjct: 422  KGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESI 481

Query: 1564 WSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLSV 1385
            W+RGGN+ GL+DRE++P+PE+P +EDLT I+ W+WN+RKAKK N E H+ RCD E+KLSV
Sbjct: 482  WARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSV 541

Query: 1384 ARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKIH 1205
            ARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGKSGLRWLKI 
Sbjct: 542  ARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQ 601

Query: 1204 LANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLSD 1025
            LAN+Y GGVEKLSYDGRL FV+NH+ ++FDSADNP+NG  WW+ AEDPFQCLAAC+NLS+
Sbjct: 602  LANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSE 661

Query: 1024 ALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAARV 845
            ALRS SPH+VISHLPIHQDGSCNGLQHYAALGR++LEA+AVNLVAGEKPADVYS IAARV
Sbjct: 662  ALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARV 721

Query: 844  LDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVER 665
             +IM +DS KDPATDP ALLAKVLI QVDRKLVKQTVMTSVYGVT++GAREQIKRRL E+
Sbjct: 722  HEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEK 781

Query: 664  GQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLGL 485
            G ITD+R+LF+A+CYAAKVTL +LGE+FQAAR IM WLG+CAKVIASEN+PV+WTTPLGL
Sbjct: 782  GLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGL 841

Query: 484  PVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIACR 305
            PV+QPY  SERHLIRTSLQVLALQREG  V ++ Q+TAFPPNFVHSLDGSHMMMTA+ACR
Sbjct: 842  PVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACR 901

Query: 304  KAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXXP 125
             AGL FAGVHDSFWTHACDVD+MN+ILRE+FVELY +P+LENL ESFQTS         P
Sbjct: 902  DAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLP 961

Query: 124  KRGNFNLREVIESPYFFN 71
             RGNF+LREV+ESPYFFN
Sbjct: 962  DRGNFDLREVLESPYFFN 979


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Fragaria
            vesca subsp. vesca]
          Length = 973

 Score = 1226 bits (3171), Expect = 0.0
 Identities = 591/799 (73%), Positives = 690/799 (86%), Gaps = 2/799 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVK+LFLGWFEPLR+AI KEQ+AQ+ + HK A+A HI LLPADKMA+IVMHK MGL+M G
Sbjct: 176  YVKALFLGWFEPLREAIAKEQKAQQTKKHKQAFAPHIDLLPADKMALIVMHKLMGLVMMG 235

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNN-EVDINAVFSKEQEIKRKHVL 2105
             ++GCV+VVQAA+H+G AIEQEV+IHSFLEK+K  +R    V      SKE+EI RK V 
Sbjct: 236  NQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKSKSLQRKKTSVADEDGLSKEKEILRKRVN 295

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
              ++ K+L  VQKLLK E+ M+PWGRD QAKLGSRLIELL E+A VQPPLDQ A  PP++
Sbjct: 296  GLIRRKRLVEVQKLLKKED-MKPWGRDTQAKLGSRLIELLTETAHVQPPLDQLADGPPDV 354

Query: 1924 RPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGY 1748
            RPAFRH  K   K  G KL   +GVIECD LV  GLD TA+HM+IPY+PML+PPK+WKGY
Sbjct: 355  RPAFRHRLKAAAKSPGQKLVKNYGVIECDPLVLAGLDKTAKHMLIPYVPMLVPPKRWKGY 414

Query: 1747 DKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEI 1568
            DKGGHL++PSYVMRTHGS++Q D +++   +Q++KVFEALD LGSTKWR+N++VL+V+E 
Sbjct: 415  DKGGHLFLPSYVMRTHGSRKQVDTMRNISGRQMQKVFEALDMLGSTKWRINKKVLNVVES 474

Query: 1567 MWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLS 1388
            +W+RGGN+AGL+DRED+P+PE+P SED T I+EWRW++RKAKK N E H+QRCD ELKLS
Sbjct: 475  IWARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQERHSQRCDTELKLS 534

Query: 1387 VARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKI 1208
            VAR+MKDE+GFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGKSGLRWLKI
Sbjct: 535  VARRMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKI 594

Query: 1207 HLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLS 1028
            HLAN+Y GGVEKLSYDGR++FV+NHI +IFDSA NPVNG  WW+ AEDP QCLAAC+NLS
Sbjct: 595  HLANLYSGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLS 654

Query: 1027 DALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAAR 848
            +AL SPSPH+VISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYS IA R
Sbjct: 655  EALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAVR 714

Query: 847  VLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVE 668
            V DIM +DS KDP T+P ALLAKVL++Q+DRKLVKQTVMTSVYGVT+VGAREQIKRRL E
Sbjct: 715  VHDIMKRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 774

Query: 667  RGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLG 488
            +G ITDDR+LF+A+CYAAKVTL +LGE+FQAAR IM WLGDCAKVIASEN+PVRWTTPLG
Sbjct: 775  KGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLG 834

Query: 487  LPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIAC 308
            LPVVQPY  SERHLIRTSLQVLALQRE + V V+ Q+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 835  LPVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRTAFPPNFVHSLDGSHMMMTALAC 894

Query: 307  RKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXX 128
            R AG++FAGVHDSFWTHACDVD+MN+ILRE FVELY  P+LENL ESFQ +         
Sbjct: 895  RDAGIRFAGVHDSFWTHACDVDQMNQILRENFVELYSKPILENLLESFQAAYPELTFPPL 954

Query: 127  PKRGNFNLREVIESPYFFN 71
            P+RG+F+L+EV++SPYFFN
Sbjct: 955  PERGDFDLQEVLKSPYFFN 973


>ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Gossypium
            raimondii] gi|763786877|gb|KJB53873.1| hypothetical
            protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score = 1224 bits (3168), Expect = 0.0
 Identities = 593/800 (74%), Positives = 694/800 (86%), Gaps = 3/800 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHK--AAYARHIGLLPADKMAVIVMHKAMGLLM 2288
            YVK LFLGWFEPLR+AI KEQ+ Q+ +  K  AAYA HI LLPADK+AVIVMHK MGL+M
Sbjct: 174  YVKGLFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVM 233

Query: 2287 TGQEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIKRKHV 2108
              +E+G V+VVQAA+H+G AIEQEV+IHSFLEKTK  +R   VD     SKE+EI RK V
Sbjct: 234  GAEEDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRKQIVDEVQGASKEKEILRKRV 293

Query: 2107 LKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPE 1928
               ++ ++L  VQKL+KNE  ++PWGRDAQAKLGSRL+ELL E+A+VQPP+DQS  SP +
Sbjct: 294  NSLIRRRRLTEVQKLVKNEE-IKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLD 352

Query: 1927 IRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKG 1751
            +RPAFRH FKT+++  G K+K ++GVIECD L+  GLD +A+HM+IPY+PML+PPKKWKG
Sbjct: 353  VRPAFRHKFKTISRGPGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKG 412

Query: 1750 YDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLE 1571
            YDKGG+L++PSYVMRTHGS++QQ+A+K    K ++KVFEALDTLGSTKWRVN +VL V+E
Sbjct: 413  YDKGGYLFLPSYVMRTHGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVE 472

Query: 1570 IMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKL 1391
             +W+ GGN+AGL+DR DIPIPE+P SED T I+EW+W+ RKA K N E H+QRCD ELKL
Sbjct: 473  SIWASGGNIAGLVDRNDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKL 532

Query: 1390 SVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLK 1211
            SVARKM++EEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLG+SGL WLK
Sbjct: 533  SVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLK 592

Query: 1210 IHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNL 1031
            IHLAN+Y GGVEKLS+DGRL FV+NH+  IFDSA+NP+NG  WW+ AEDPFQCLAACMNL
Sbjct: 593  IHLANLYSGGVEKLSHDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNL 652

Query: 1030 SDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAA 851
            S+AL+S SPHS+IS+LPIHQDGSCNGLQHYAALGRD LEAAAVNLVAGEKPADVYS IA 
Sbjct: 653  SEALKSTSPHSMISYLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAV 712

Query: 850  RVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLV 671
            RV +IM +DS KDPAT+P ALLAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL 
Sbjct: 713  RVHNIMKRDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLE 772

Query: 670  ERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPL 491
            E+G ITDDR+LFSA+CY AKVTL +LGE+FQAAR+IM WLGDCAKVIASEN+PVRWTTPL
Sbjct: 773  EKGHITDDRLLFSAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPL 832

Query: 490  GLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIA 311
            GLPVVQPY  SERHLIRT+LQVLALQREG+SV V+ Q+TAFPPNFVHSLDGSHMMMTA+A
Sbjct: 833  GLPVVQPYYKSERHLIRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVA 892

Query: 310  CRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXX 131
            CR AGL FAGVHDSFWTHACDV++MN+ILRE+FVELY +PVLENL ESF+TS        
Sbjct: 893  CRDAGLYFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPP 952

Query: 130  XPKRGNFNLREVIESPYFFN 71
             P+RGNF+LREV++SPYFFN
Sbjct: 953  LPERGNFDLREVLKSPYFFN 972


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score = 1219 bits (3155), Expect = 0.0
 Identities = 588/799 (73%), Positives = 687/799 (85%), Gaps = 2/799 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            ++K LFLGWF PLR+AI +EQ+ Q  +  KAAYA HI LLPADK+AVIVMHK MGL+M G
Sbjct: 212  HIKGLFLGWFGPLREAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVMAG 271

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEV-DINAVFSKEQEIKRKHVL 2105
             E+ CV+VVQAA+H+G AIEQE++IHSFLEKTK  KR   + D   V SKE+E+ RK V 
Sbjct: 272  HEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVN 331

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
              +K K++   QKLLKNE   +PWGRD QAKLGSRL+ELLIE+A+VQ P++ +  SPP++
Sbjct: 332  SLIKSKRVMEAQKLLKNEET-KPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDV 390

Query: 1924 RPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGY 1748
            RPAFRH FKT+ K  G K   ++GV+ECD LV  GLD +A+HM+IPY+PML+PPKKWKGY
Sbjct: 391  RPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLAGLDRSAKHMLIPYVPMLVPPKKWKGY 450

Query: 1747 DKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEI 1568
            +KGG+L++PSYVMRTHGS++QQ+A+KS     +KKVFEALDTLGSTKWRVN++VL VLE 
Sbjct: 451  NKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLES 510

Query: 1567 MWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLS 1388
            +W  GGN+AGL+DR D+PIPE+P SED+T +++W+W+ RKAKK N E H+QRCD ELKLS
Sbjct: 511  IWVSGGNIAGLVDRNDVPIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLS 570

Query: 1387 VARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKI 1208
            VAR+MKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDVCRG+LEFAEGRPLGKSGLRWLKI
Sbjct: 571  VARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKI 630

Query: 1207 HLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLS 1028
            HLAN++ GGVEKLS+DGRL FVENH+  IFDSA+NP+NG  WW+ AEDPFQCLAAC+NLS
Sbjct: 631  HLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLS 690

Query: 1027 DALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAAR 848
            +AL+S SPHSVISHLPIHQDGSCNGLQHYAALGR+TLEAAAVNLVAGEKPADVYS IA R
Sbjct: 691  EALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVR 750

Query: 847  VLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVE 668
            V +IM +DS KDP+  P ALLAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL E
Sbjct: 751  VHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEE 810

Query: 667  RGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLG 488
            +G ITDDR LF+A+CYAAKVTL +LGE+F+AARSIM WLGDCAKVIASEN+PVRWTTPLG
Sbjct: 811  KGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLG 870

Query: 487  LPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIAC 308
            LPVVQPY  +ERHLIRTSLQVLALQREG SV ++ Q+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 871  LPVVQPYCKNERHLIRTSLQVLALQREGKSVEIRKQRTAFPPNFVHSLDGSHMMMTAVAC 930

Query: 307  RKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXX 128
            R AGL FAGVHDSFWTHACDVD MN+ILR++FVELY++P+LENL ESFQTS         
Sbjct: 931  RDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPILENLLESFQTSYPTLSFPPL 990

Query: 127  PKRGNFNLREVIESPYFFN 71
            P+RGNF+L EV+ESPYFFN
Sbjct: 991  PERGNFDLEEVLESPYFFN 1009


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
            gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
            superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score = 1215 bits (3144), Expect = 0.0
 Identities = 585/800 (73%), Positives = 694/800 (86%), Gaps = 3/800 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHK--AAYARHIGLLPADKMAVIVMHKAMGLLM 2288
            YVK LFLGWFEP+R+AI +EQ+ Q+ ++ K  AAYA HI LLPADKMAVIVMHK MGL+M
Sbjct: 180  YVKGLFLGWFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVM 239

Query: 2287 TGQEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIKRKHV 2108
              QE G V+VVQAA+H+G AIEQEV+IH+FLEKTK  +R    D     SKE+EI +K V
Sbjct: 240  GAQENGFVQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDEVQGLSKEKEILKKRV 299

Query: 2107 LKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPE 1928
               ++ ++L  VQKL+KNE  ++PWGRDAQAKLGSRL+ELL E+A+VQPP+DQS  SPP+
Sbjct: 300  NSLIRRRRLVEVQKLVKNEE-IKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPD 358

Query: 1927 IRPAFRHTFKTVTKEDGK-LKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKG 1751
            ++PAFRH FKT++K+ GK +  ++GVIECD L+  GLD +A+HM+IPY+PML+PPKKWKG
Sbjct: 359  VQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKG 418

Query: 1750 YDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLE 1571
            YDKGG+L++PSYVMRTHGS++QQDA+K    K+++KVFEALDTLGSTKWRVN++VL V+E
Sbjct: 419  YDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVE 478

Query: 1570 IMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKL 1391
             +W+ GGN+AGL+DR DIPIPE+P SED T  +EW+W+ RKA K N E H+QRCD ELKL
Sbjct: 479  SIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKL 538

Query: 1390 SVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLK 1211
            SVARKM++EEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLG+SGL WLK
Sbjct: 539  SVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLK 598

Query: 1210 IHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNL 1031
            IHLAN++ GGVEKLS+DGRL FV+NH+ +IFDSA+NP+NG  WW+ AEDPFQCLAAC+NL
Sbjct: 599  IHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINL 658

Query: 1030 SDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAA 851
            S++L+S SPHSV+S+LPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEKPADVYS IA 
Sbjct: 659  SESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAV 718

Query: 850  RVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLV 671
            RV +IM +DS KDPAT+P A LAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL 
Sbjct: 719  RVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLE 778

Query: 670  ERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPL 491
            E+G ITDDR+LF+A+CY AKVTL +LGE+FQAAR+IM WLGDCAKVIASEN+PV+WTTPL
Sbjct: 779  EKGHITDDRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPL 838

Query: 490  GLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIA 311
            GLPVVQPY  SERHLIRTSLQVLALQREG SV V+ Q+TAFPPNFVHSLDGSHMMMTA+A
Sbjct: 839  GLPVVQPYYKSERHLIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAVA 898

Query: 310  CRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXX 131
            CR AGL FAGVHDSFWTHACDV++MN+ILRE+FVELY +PVLENL ES QTS        
Sbjct: 899  CRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPP 958

Query: 130  XPKRGNFNLREVIESPYFFN 71
             P+RGNF+LREV++SPYFFN
Sbjct: 959  LPERGNFDLREVLKSPYFFN 978


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
            gi|462398756|gb|EMJ04424.1| hypothetical protein
            PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score = 1215 bits (3143), Expect = 0.0
 Identities = 586/799 (73%), Positives = 688/799 (86%), Gaps = 2/799 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVK+LFLGWFEPLR+AI +EQ+ Q+ + HKAA+A HI LLPADKMA+IVMHK MGL+M G
Sbjct: 179  YVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVG 238

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKK-SKRNNEVDINAVFSKEQEIKRKHVL 2105
             ++GCV+VVQAA+H+G AIEQEV+IHSFLEKTK   K+   V      SKE+EI RK V 
Sbjct: 239  NQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRKRVN 298

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
              ++ K+L  VQKLL  E  M+PWGRD QAKLGSRLIELL E+A+VQPPL Q A SPP++
Sbjct: 299  GLIRRKRLNEVQKLLIKEE-MKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLADSPPDV 357

Query: 1924 RPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGY 1748
            RPAFRH FK V K  G K+   +GVIECD LV  GLD TA+HM+IPY+PML+PPK+WKGY
Sbjct: 358  RPAFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGY 417

Query: 1747 DKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEI 1568
            DKGGHL++PSYVMRTHGS++Q DA+++  + Q++KVFEALD LGSTKWRVN++VL V+E 
Sbjct: 418  DKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVES 477

Query: 1567 MWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLS 1388
            +W+RGGN+AGL++RED+P+P++  SEDL  I+EW+W+ RKAKK N E H+QRCD ELKLS
Sbjct: 478  IWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKLS 537

Query: 1387 VARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKI 1208
            VARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGKSGLRWLKI
Sbjct: 538  VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKI 597

Query: 1207 HLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLS 1028
            HLAN+Y GGVEKLSY+GRL FV+NHI +IFDSA NPVNG  WW+ AEDP QCLAAC+NLS
Sbjct: 598  HLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLS 657

Query: 1027 DALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAAR 848
            +AL SPSPH+VISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLV G+KPADVYS IAAR
Sbjct: 658  EALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAAR 717

Query: 847  VLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVE 668
            V +IM +DS KDP T P ALLA++L++Q+DRKLVKQTVMTSVYGVT+VGAREQIKRRL E
Sbjct: 718  VHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 777

Query: 667  RGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLG 488
            +G ITDDR+LF+A+CYAAKVTL +LGE+FQAAR IM WLGDCAKVIASEN+PVRWTTPLG
Sbjct: 778  KGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLG 837

Query: 487  LPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIAC 308
            LPVVQPY  SERHLIRTSLQVLALQRE +SV ++ Q+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 838  LPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALAC 897

Query: 307  RKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXX 128
            R AGL+FAGVHDSFWTH CDVD+MN+ILRE+FVELY +P+LE+L ESFQ S         
Sbjct: 898  RDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSMPILESLLESFQASYPALTFPPL 957

Query: 127  PKRGNFNLREVIESPYFFN 71
            P+RG+F+L +V+ESPYFFN
Sbjct: 958  PERGDFDLLQVLESPYFFN 976


>gb|KDO62286.1| hypothetical protein CISIN_1g001795mg [Citrus sinensis]
            gi|641843387|gb|KDO62287.1| hypothetical protein
            CISIN_1g001795mg [Citrus sinensis]
          Length = 1012

 Score = 1212 bits (3136), Expect = 0.0
 Identities = 585/799 (73%), Positives = 686/799 (85%), Gaps = 2/799 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            ++K LFLGWF PL +AI +EQ+ Q  +  KAAYA HI LLPADK+AVIVMHK MGL+M G
Sbjct: 215  HIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVMAG 274

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEV-DINAVFSKEQEIKRKHVL 2105
             E+ CV+VVQAA+H+G AIEQE++IHSFLEKTK  KR   + D   V SKE+E+ RK V 
Sbjct: 275  HEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVN 334

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
              +K K++   QKLLKNE   +PWGRD QAKLGSRL+ELLIE+A+VQ P++ +  SPP++
Sbjct: 335  SLIKSKRVMEAQKLLKNEET-KPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDV 393

Query: 1924 RPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGY 1748
            RPAFRH FKT+ K  G K   ++GV+ECD LV +GLD +A+HM+IPY+PML+PPKKWKGY
Sbjct: 394  RPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGY 453

Query: 1747 DKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEI 1568
            +KGG+L++PSYVMRTHGS++QQ+A+KS     +KKVFEALDTLGSTKWRVN++VL VLE 
Sbjct: 454  NKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLES 513

Query: 1567 MWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLS 1388
            +W  GGN+AGL+DR D+ IPE+P SED+T +++W+W+ RKAKK N E H+QRCD ELKLS
Sbjct: 514  IWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLS 573

Query: 1387 VARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKI 1208
            VAR+MKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDVCRG+LEFAEGRPLGKSGLRWLKI
Sbjct: 574  VARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKI 633

Query: 1207 HLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLS 1028
            HLAN++ GGVEKLS+DGRL FVENH+  IFDSA+NP+NG  WW+ AEDPFQCLAAC+NLS
Sbjct: 634  HLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLS 693

Query: 1027 DALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAAR 848
            +AL+S SPHSVISHLPIHQDGSCNGLQHYAALGR+TLEAAAVNLVAGEKPADVYS IA R
Sbjct: 694  EALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVR 753

Query: 847  VLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVE 668
            V +IM +DS KDP+  P ALLAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL E
Sbjct: 754  VHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEE 813

Query: 667  RGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLG 488
            +G ITDDR LF+A+CYAAKVTL +LGE+F+AARSIM WLGDCAKVIASEN+PVRWTTPLG
Sbjct: 814  KGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLG 873

Query: 487  LPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIAC 308
            LPVVQPY  +ERHLIRTSLQVLALQREG+ V ++ Q+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 874  LPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVAC 933

Query: 307  RKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXX 128
            R AGL FAGVHDSFWTHACDVD MN+ILR++FVELY++P+LENL ESFQTS         
Sbjct: 934  RDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPPL 993

Query: 127  PKRGNFNLREVIESPYFFN 71
            P+RGNF+L EV+ESPYFFN
Sbjct: 994  PERGNFDLEEVLESPYFFN 1012


>ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Prunus mume]
          Length = 976

 Score = 1212 bits (3135), Expect = 0.0
 Identities = 585/799 (73%), Positives = 687/799 (85%), Gaps = 2/799 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVK+LFLGWFEPLR+AI +EQ+ Q+ + HKAA+A HI LLPADKMA+IVMHK MGL+M G
Sbjct: 179  YVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVG 238

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKK-SKRNNEVDINAVFSKEQEIKRKHVL 2105
             ++GCV+VVQAA+H+G AIEQEV+IHSFLEKTK   K+   V      SKE+EI RK V 
Sbjct: 239  NQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRKRVN 298

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
              ++ K+L  VQKLL  E  M+PWGRD QAKLGSRLIELL E+A+VQPPL Q A SPP++
Sbjct: 299  GLIRRKRLNEVQKLLIKEE-MKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLAESPPDV 357

Query: 1924 RPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGY 1748
            RPAFRH FK V K  G K+   +GVIECD LV  GLD TA+HM+IPY+PML+PPK+WKGY
Sbjct: 358  RPAFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGY 417

Query: 1747 DKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEI 1568
            DKGGHL++PSYVMRTHGS++Q DA+++  + Q++KVFEALD LGSTKWRVN++VL V+E 
Sbjct: 418  DKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVES 477

Query: 1567 MWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLS 1388
            +W+RGGN+AGL++RED+P+P++  SEDL  I+EW+W+ RKAKK N E H+ RCD ELKLS
Sbjct: 478  IWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSLRCDTELKLS 537

Query: 1387 VARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKI 1208
            VARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGKSGLRWLKI
Sbjct: 538  VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKI 597

Query: 1207 HLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLS 1028
            HLAN+Y GGVEKLSY+GRL FV+NHI +IFDSA NPVNG  WW+ AEDP QCLAAC+NLS
Sbjct: 598  HLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLS 657

Query: 1027 DALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAAR 848
            +AL SPSPH+VISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLV G+KPADVYS IAAR
Sbjct: 658  EALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAAR 717

Query: 847  VLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVE 668
            V +IM +DS KDP T P ALLA++L++Q+DRKLVKQTVMTSVYGVT+VGAREQIKRRL E
Sbjct: 718  VHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 777

Query: 667  RGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLG 488
            +G ITDDR+LF+A+CYAAKVTL +LGE+FQAAR IM WLGDCAKVIASEN+PVRWTTPLG
Sbjct: 778  KGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLG 837

Query: 487  LPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIAC 308
            LPVVQPY  SERHLIRTSLQVLALQRE +SV ++ Q+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 838  LPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALAC 897

Query: 307  RKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXX 128
            R AGL+FAGVHDSFWTH CDVD+MN+ILRE+FVELY +P+LE+L ESFQ S         
Sbjct: 898  RDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSMPILESLLESFQASYPALTFPPL 957

Query: 127  PKRGNFNLREVIESPYFFN 71
            P+RG+F+L +V+ESPYFFN
Sbjct: 958  PERGDFDLLQVLESPYFFN 976


>gb|KDO62285.1| hypothetical protein CISIN_1g001795mg [Citrus sinensis]
          Length = 1012

 Score = 1211 bits (3133), Expect = 0.0
 Identities = 584/799 (73%), Positives = 686/799 (85%), Gaps = 2/799 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            ++K LFLGWF PL +AI +EQ+ Q  +  KAAYA HI LLPADK+AVIVMHK MGL+M G
Sbjct: 215  HIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVMAG 274

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEV-DINAVFSKEQEIKRKHVL 2105
             E+ CV+VVQAA+H+G AIEQE++IHSFLEKTK  KR   + D   V SKE+E+ RK V 
Sbjct: 275  HEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVN 334

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
              +K K++   QKLLKNE   +PWGRD QAKLGSRL+ELLIE+A+VQ P++ +  SPP++
Sbjct: 335  SLIKSKRVMEAQKLLKNEET-KPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDV 393

Query: 1924 RPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGY 1748
            RPAFRH FKT+ K  G K   ++GV+ECD LV +GLD +A+HM+IPY+PML+PPKKWKGY
Sbjct: 394  RPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGY 453

Query: 1747 DKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEI 1568
            +KGG+L++PSYVMRTHGS++QQ+A+KS     +KKVFEALDTLGSTKWRVN++VL VLE 
Sbjct: 454  NKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLES 513

Query: 1567 MWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLS 1388
            +W  GGN+AGL+DR D+ IPE+P SED+T +++W+W+ RKAKK N E H+QRCD ELKLS
Sbjct: 514  IWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLS 573

Query: 1387 VARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKI 1208
            VAR+MKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDVCRG+LEFAEGRPLGKSGLRWLKI
Sbjct: 574  VARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKI 633

Query: 1207 HLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLS 1028
            HLAN++ GGVEKLS+DGRL FVENH+  IFDSA+NP+NG  WW+ AEDPFQCLAAC+NLS
Sbjct: 634  HLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLS 693

Query: 1027 DALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAAR 848
            +AL+S SPHSVISHLPIHQDGSCNGLQHYAALGR+T+EAAAVNLVAGEKPADVYS IA R
Sbjct: 694  EALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTVEAAAVNLVAGEKPADVYSEIAVR 753

Query: 847  VLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVE 668
            V +IM +DS KDP+  P ALLAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL E
Sbjct: 754  VHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEE 813

Query: 667  RGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLG 488
            +G ITDDR LF+A+CYAAKVTL +LGE+F+AARSIM WLGDCAKVIASEN+PVRWTTPLG
Sbjct: 814  KGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLG 873

Query: 487  LPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIAC 308
            LPVVQPY  +ERHLIRTSLQVLALQREG+ V ++ Q+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 874  LPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVAC 933

Query: 307  RKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXX 128
            R AGL FAGVHDSFWTHACDVD MN+ILR++FVELY++P+LENL ESFQTS         
Sbjct: 934  RDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPPL 993

Query: 127  PKRGNFNLREVIESPYFFN 71
            P+RGNF+L EV+ESPYFFN
Sbjct: 994  PERGNFDLEEVLESPYFFN 1012


>ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
            gi|508784241|gb|EOY31497.1| DNA/RNA polymerases
            superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score = 1211 bits (3133), Expect = 0.0
 Identities = 585/801 (73%), Positives = 694/801 (86%), Gaps = 4/801 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHK--AAYARHIGLLPADKMAVIVMHKAMGLLM 2288
            YVK LFLGWFEP+R+AI +EQ+ Q+ ++ K  AAYA HI LLPADKMAVIVMHK MGL+M
Sbjct: 58   YVKGLFLGWFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVM 117

Query: 2287 TGQEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIKRKHV 2108
              QE G V+VVQAA+H+G AIEQEV+IH+FLEKTK  +R    D     SKE+EI +K V
Sbjct: 118  GAQENGFVQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDEVQGLSKEKEILKKRV 177

Query: 2107 LKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPE 1928
               ++ ++L  VQKL+KNE  ++PWGRDAQAKLGSRL+ELL E+A+VQPP+DQS  SPP+
Sbjct: 178  NSLIRRRRLVEVQKLVKNEE-IKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPD 236

Query: 1927 IRPAFRHTFKTVTKEDGK-LKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKG 1751
            ++PAFRH FKT++K+ GK +  ++GVIECD L+  GLD +A+HM+IPY+PML+PPKKWKG
Sbjct: 237  VQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKG 296

Query: 1750 YDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLE 1571
            YDKGG+L++PSYVMRTHGS++QQDA+K    K+++KVFEALDTLGSTKWRVN++VL V+E
Sbjct: 297  YDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVE 356

Query: 1570 IMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKL 1391
             +W+ GGN+AGL+DR DIPIPE+P SED T  +EW+W+ RKA K N E H+QRCD ELKL
Sbjct: 357  SIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKL 416

Query: 1390 SVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLK 1211
            SVARKM++EEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLG+SGL WLK
Sbjct: 417  SVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLK 476

Query: 1210 IHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNL 1031
            IHLAN++ GGVEKLS+DGRL FV+NH+ +IFDSA+NP+NG  WW+ AEDPFQCLAAC+NL
Sbjct: 477  IHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINL 536

Query: 1030 SDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAA 851
            S++L+S SPHSV+S+LPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEKPADVYS IA 
Sbjct: 537  SESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAV 596

Query: 850  RVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLV 671
            RV +IM +DS KDPAT+P A LAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL 
Sbjct: 597  RVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLE 656

Query: 670  ERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPL 491
            E+G ITDDR+LF+A+CY AKVTL +LGE+FQAAR+IM WLGDCAKVIASEN+PV+WTTPL
Sbjct: 657  EKGHITDDRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPL 716

Query: 490  GLPVVQPYRNSERHLIRTSLQVLALQREGHSVA-VKHQKTAFPPNFVHSLDGSHMMMTAI 314
            GLPVVQPY  SERHLIRTSLQVLALQREG SV  V+ Q+TAFPPNFVHSLDGSHMMMTA+
Sbjct: 717  GLPVVQPYYKSERHLIRTSLQVLALQREGDSVVEVRKQRTAFPPNFVHSLDGSHMMMTAV 776

Query: 313  ACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXX 134
            ACR AGL FAGVHDSFWTHACDV++MN+ILRE+FVELY +PVLENL ES QTS       
Sbjct: 777  ACRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFP 836

Query: 133  XXPKRGNFNLREVIESPYFFN 71
              P+RGNF+LREV++SPYFFN
Sbjct: 837  PLPERGNFDLREVLKSPYFFN 857


>ref|XP_012071554.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Jatropha
            curcas]
          Length = 993

 Score = 1210 bits (3131), Expect = 0.0
 Identities = 581/798 (72%), Positives = 688/798 (86%), Gaps = 1/798 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVK LFLGWFEPL++AI  EQ+ Q ++  K+A+A HI LLPADKMA+IVMHK MGL+M G
Sbjct: 197  YVKGLFLGWFEPLKEAIEAEQKLQRSKKQKSAFAPHIELLPADKMALIVMHKMMGLMMVG 256

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEV-DINAVFSKEQEIKRKHVL 2105
             E+GCV VVQAA+ +G A+EQEV+IH+FLEKTK  +R N V D     SKE+E+ RK + 
Sbjct: 257  HEDGCVPVVQAAVQIGMAVEQEVRIHNFLEKTKSFQRKNAVGDAQESLSKEKEVLRKRIN 316

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
              ++ K+L  VQKL++NE   +PWGRD QAKLGSRL+ELLIESAFVQPP++QS  + P++
Sbjct: 317  NLIRRKRLIQVQKLVRNEET-KPWGRDTQAKLGSRLVELLIESAFVQPPVNQSPDTLPDV 375

Query: 1924 RPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGYD 1745
            RPAFRH F+T      K+  ++GVIECD LV  GLD +A+HM+IPY PML+PPKKWKGYD
Sbjct: 376  RPAFRHRFRTANNPGRKIMKRYGVIECDPLVLAGLDGSAKHMMIPYFPMLVPPKKWKGYD 435

Query: 1744 KGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEIM 1565
            KGGH ++PS++MRTHGS++QQDA+K  P K ++KVFEALDTLG+TKWRVNRRVLDV+E +
Sbjct: 436  KGGHFFLPSFLMRTHGSRKQQDALKHVPGKNMQKVFEALDTLGNTKWRVNRRVLDVVESI 495

Query: 1564 WSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLSV 1385
            W+ GGN+AGL+DR DIPIPE+P SEDLT I++WRW+ RKAKK N EMH+QRCD ELKLSV
Sbjct: 496  WAGGGNIAGLVDRADIPIPEKPISEDLTEIQKWRWSMRKAKKINREMHSQRCDTELKLSV 555

Query: 1384 ARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKIH 1205
            ARK+KDE+GFYYPHNLDFRGRAYPMH HL+HLSSD+ RGILEFAEGRPLGKSGL WLKIH
Sbjct: 556  ARKLKDEDGFYYPHNLDFRGRAYPMHPHLSHLSSDLSRGILEFAEGRPLGKSGLHWLKIH 615

Query: 1204 LANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLSD 1025
            LAN+Y GGV+KLS++GRL FVENH+  IFDSA NPV+GK WW+ AEDPFQCLAAC+NLS+
Sbjct: 616  LANLYSGGVKKLSHEGRLAFVENHLDEIFDSAANPVHGKRWWLMAEDPFQCLAACINLSE 675

Query: 1024 ALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAARV 845
            AL+S SP++VISHLPIHQDGSCNGLQHYAALGR++LEAAAVNLVAGEKPADVY+ IA RV
Sbjct: 676  ALKSSSPYNVISHLPIHQDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPADVYTEIAVRV 735

Query: 844  LDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVER 665
             +I++KDS KDPAT+P ALLAK+LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+
Sbjct: 736  HEIILKDSSKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEK 795

Query: 664  GQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLGL 485
            G ITDDR+LFSA+CY AKVT+ +LGE+FQAAR IM WLGDCAKVIASE++PVRWTTPLGL
Sbjct: 796  GHITDDRLLFSAACYTAKVTMKALGELFQAARDIMSWLGDCAKVIASEDQPVRWTTPLGL 855

Query: 484  PVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIACR 305
            PVVQPY  S+RHLIRTSLQVLALQREG SV V+ Q+TAFPPNFVHSLDGSHMMMTA+ACR
Sbjct: 856  PVVQPYFKSKRHLIRTSLQVLALQREGSSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACR 915

Query: 304  KAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXXP 125
             A L+FAGVHDSFWTHACDVD MN+ILR++FVELY +P+LENL E FQTS         P
Sbjct: 916  DADLRFAGVHDSFWTHACDVDLMNRILRDKFVELYRMPILENLLEDFQTSYPALTFPPLP 975

Query: 124  KRGNFNLREVIESPYFFN 71
            +RGNF+L+EV++SPYFFN
Sbjct: 976  ERGNFDLQEVLKSPYFFN 993


>gb|KDP38713.1| hypothetical protein JCGZ_04066 [Jatropha curcas]
          Length = 819

 Score = 1210 bits (3131), Expect = 0.0
 Identities = 581/798 (72%), Positives = 688/798 (86%), Gaps = 1/798 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVK LFLGWFEPL++AI  EQ+ Q ++  K+A+A HI LLPADKMA+IVMHK MGL+M G
Sbjct: 23   YVKGLFLGWFEPLKEAIEAEQKLQRSKKQKSAFAPHIELLPADKMALIVMHKMMGLMMVG 82

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEV-DINAVFSKEQEIKRKHVL 2105
             E+GCV VVQAA+ +G A+EQEV+IH+FLEKTK  +R N V D     SKE+E+ RK + 
Sbjct: 83   HEDGCVPVVQAAVQIGMAVEQEVRIHNFLEKTKSFQRKNAVGDAQESLSKEKEVLRKRIN 142

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
              ++ K+L  VQKL++NE   +PWGRD QAKLGSRL+ELLIESAFVQPP++QS  + P++
Sbjct: 143  NLIRRKRLIQVQKLVRNEET-KPWGRDTQAKLGSRLVELLIESAFVQPPVNQSPDTLPDV 201

Query: 1924 RPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGYD 1745
            RPAFRH F+T      K+  ++GVIECD LV  GLD +A+HM+IPY PML+PPKKWKGYD
Sbjct: 202  RPAFRHRFRTANNPGRKIMKRYGVIECDPLVLAGLDGSAKHMMIPYFPMLVPPKKWKGYD 261

Query: 1744 KGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEIM 1565
            KGGH ++PS++MRTHGS++QQDA+K  P K ++KVFEALDTLG+TKWRVNRRVLDV+E +
Sbjct: 262  KGGHFFLPSFLMRTHGSRKQQDALKHVPGKNMQKVFEALDTLGNTKWRVNRRVLDVVESI 321

Query: 1564 WSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLSV 1385
            W+ GGN+AGL+DR DIPIPE+P SEDLT I++WRW+ RKAKK N EMH+QRCD ELKLSV
Sbjct: 322  WAGGGNIAGLVDRADIPIPEKPISEDLTEIQKWRWSMRKAKKINREMHSQRCDTELKLSV 381

Query: 1384 ARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKIH 1205
            ARK+KDE+GFYYPHNLDFRGRAYPMH HL+HLSSD+ RGILEFAEGRPLGKSGL WLKIH
Sbjct: 382  ARKLKDEDGFYYPHNLDFRGRAYPMHPHLSHLSSDLSRGILEFAEGRPLGKSGLHWLKIH 441

Query: 1204 LANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLSD 1025
            LAN+Y GGV+KLS++GRL FVENH+  IFDSA NPV+GK WW+ AEDPFQCLAAC+NLS+
Sbjct: 442  LANLYSGGVKKLSHEGRLAFVENHLDEIFDSAANPVHGKRWWLMAEDPFQCLAACINLSE 501

Query: 1024 ALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAARV 845
            AL+S SP++VISHLPIHQDGSCNGLQHYAALGR++LEAAAVNLVAGEKPADVY+ IA RV
Sbjct: 502  ALKSSSPYNVISHLPIHQDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPADVYTEIAVRV 561

Query: 844  LDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVER 665
             +I++KDS KDPAT+P ALLAK+LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+
Sbjct: 562  HEIILKDSSKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEK 621

Query: 664  GQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLGL 485
            G ITDDR+LFSA+CY AKVT+ +LGE+FQAAR IM WLGDCAKVIASE++PVRWTTPLGL
Sbjct: 622  GHITDDRLLFSAACYTAKVTMKALGELFQAARDIMSWLGDCAKVIASEDQPVRWTTPLGL 681

Query: 484  PVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIACR 305
            PVVQPY  S+RHLIRTSLQVLALQREG SV V+ Q+TAFPPNFVHSLDGSHMMMTA+ACR
Sbjct: 682  PVVQPYFKSKRHLIRTSLQVLALQREGSSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACR 741

Query: 304  KAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXXP 125
             A L+FAGVHDSFWTHACDVD MN+ILR++FVELY +P+LENL E FQTS         P
Sbjct: 742  DADLRFAGVHDSFWTHACDVDLMNRILRDKFVELYRMPILENLLEDFQTSYPALTFPPLP 801

Query: 124  KRGNFNLREVIESPYFFN 71
            +RGNF+L+EV++SPYFFN
Sbjct: 802  ERGNFDLQEVLKSPYFFN 819


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score = 1210 bits (3130), Expect = 0.0
 Identities = 580/799 (72%), Positives = 686/799 (85%), Gaps = 2/799 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            YVK L LGWFEPL++AI KEQ+ ++++  K+A++ +I LLPADKMAVIVMHK MGLLM G
Sbjct: 85   YVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLMVG 144

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEV-DINAVFSKEQEIKRKHVL 2105
             E+GCVRVVQAA+ +G AIEQEV+IH+FLEKTK  +R   + ++     KE+E+ RK V 
Sbjct: 145  HEDGCVRVVQAAVQIGMAIEQEVRIHNFLEKTKNYQRKKTMHEVQETMDKEKEVLRKRVN 204

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
              ++ K+L  VQ L+K +   +PW R  QAKLGSRLIELL E+A+VQPP++QS   PP++
Sbjct: 205  SLIRRKRLMEVQNLVKQDET-KPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDV 263

Query: 1924 RPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGY 1748
            RPAFRH FKT+TK  G K+  K+GVIECD L+  GLD TA+HM+IPY PML+PPKKWKGY
Sbjct: 264  RPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGY 323

Query: 1747 DKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEI 1568
            DKGGHL++PSYVMRTHGS++QQ A++S P KQ++KVFEALDTLG+TKWRVNRR+LDV+E 
Sbjct: 324  DKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVER 383

Query: 1567 MWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLS 1388
            +W+ GGN+AGL+DREDIPIPE+P S+DLT I++W+W+ RKAKK N E H+QRCD ELKLS
Sbjct: 384  IWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLS 443

Query: 1387 VARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKI 1208
            VARK+KDEEGFYYPHNLDFRGRAYPMH HL HLSSD+CRG+LEF EGRPLGKSGLRWLKI
Sbjct: 444  VARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKI 503

Query: 1207 HLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLS 1028
            HLAN+Y GGVEKLS+DGRL FVENH+  IFDSA NPVNGK WW+ AEDPFQCLAAC+NLS
Sbjct: 504  HLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLS 563

Query: 1027 DALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAAR 848
            +AL S SPH+VISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVA EKP+DVYS IA R
Sbjct: 564  EALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVR 623

Query: 847  VLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVE 668
            V +I+ +DS KDPAT+P ALLAK+L+DQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E
Sbjct: 624  VHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 683

Query: 667  RGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLG 488
            +G ITDDR+LFSA+CY AKVTL +LGE+FQAAR IM WLGDCAK+IASE++PV+WTTPLG
Sbjct: 684  KGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLG 743

Query: 487  LPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIAC 308
            LPVVQPY  +ERHLI+TSLQ+LALQREG SV V+ Q+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 744  LPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVAC 803

Query: 307  RKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXX 128
            R AGL FAGVHDSFWTHA DVD MN+ILRE+FVELY++P+LENL E FQTS         
Sbjct: 804  RDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLQFPPL 863

Query: 127  PKRGNFNLREVIESPYFFN 71
            P+RGNF+L++V+ SPYFFN
Sbjct: 864  PERGNFDLQKVLRSPYFFN 882


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score = 1209 bits (3128), Expect = 0.0
 Identities = 584/799 (73%), Positives = 685/799 (85%), Gaps = 2/799 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGLLMTG 2282
            ++K LFLGWF PL +AI +EQ+ Q  +  KAAYA HI LLPADKMAVIVMHK MGL+M G
Sbjct: 215  HIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMAG 274

Query: 2281 QEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEV-DINAVFSKEQEIKRKHVL 2105
             E+ CV+VVQAA+H+G AIEQE++IHSFLEKTK  KR   + D   V SKE+E+ RK V 
Sbjct: 275  HEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVN 334

Query: 2104 KSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPEI 1925
              +K K++   QKLLKNE   +PWGRD QAKLGSRL+ELLIE+A+VQ P++ +  SPP++
Sbjct: 335  SLIKSKRVMEAQKLLKNEET-KPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDV 393

Query: 1924 RPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKGY 1748
            RPAFRH FKT+ K  G K   ++GV+ECD LV +GLD +A+HM+IPY+PML+PPKKWKGY
Sbjct: 394  RPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGY 453

Query: 1747 DKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLEI 1568
            +KGG+L++PSYVMRTHGS++QQ+A+KS     +KKVFEALDTLGSTKWRVN++VL VLE 
Sbjct: 454  NKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLES 513

Query: 1567 MWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKLS 1388
            +W  GGN+AGL+DR D+ IPE+P SED+T +++W+W+ RKAKK N E H+QRCD ELKLS
Sbjct: 514  IWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLS 573

Query: 1387 VARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLKI 1208
            VAR+MKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDVCRG+LEFAEGRPLGKSGLRWLKI
Sbjct: 574  VARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKI 633

Query: 1207 HLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNLS 1028
            HLAN++ GGVEKLS+DGRL FVENH+  IFDSA+NP+NG  WW+ AEDPFQCLAAC+NL+
Sbjct: 634  HLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLA 693

Query: 1027 DALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAAR 848
            +AL+S SPHSVISHLPIHQDGSCNGLQHYAALGR+TLEAAAVNLVAGEKPADVYS IA R
Sbjct: 694  EALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVR 753

Query: 847  VLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLVE 668
            V +IM +DS KD +  P ALLAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL E
Sbjct: 754  VHEIMKRDSNKDHSKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEE 813

Query: 667  RGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPLG 488
            +G ITDDR LF+A+CYAAKVTL +LGE+F+AARSIM WLGDCAKVIASEN+PVRWTTPLG
Sbjct: 814  KGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLG 873

Query: 487  LPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIAC 308
            LPVVQPY  +ERHLIRTSLQVLALQREG+ V ++ Q+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 874  LPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVAC 933

Query: 307  RKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXXX 128
            R AGL FAGVHDSFWTHACDVD MN+ILR++FVELY++P+LENL ESFQTS         
Sbjct: 934  RDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPSL 993

Query: 127  PKRGNFNLREVIESPYFFN 71
            P+RGNF+L EV+ESPYFFN
Sbjct: 994  PERGNFDLEEVLESPYFFN 1012


>gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score = 1209 bits (3127), Expect = 0.0
 Identities = 586/798 (73%), Positives = 688/798 (86%), Gaps = 3/798 (0%)
 Frame = -1

Query: 2461 YVKSLFLGWFEPLRDAIGKEQRAQEARTHK--AAYARHIGLLPADKMAVIVMHKAMGLLM 2288
            YVK LFLGWFEPLR+AI KEQ+ Q+ +  K  AAYA HI LLPADK+AVIVMHK MGL+M
Sbjct: 174  YVKGLFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVM 233

Query: 2287 TGQEEGCVRVVQAAIHVGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIKRKHV 2108
              +E+G V+VVQAA+H+G AIEQEV+IHSFLEKTK  +R   VD     SKE+EI RK V
Sbjct: 234  GAEEDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRKQIVDEVQGASKEKEILRKRV 293

Query: 2107 LKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSPPE 1928
               ++ ++L  VQKL+KNE  ++PWGRDAQAKLGSRL+ELL E+A+VQPP+DQS  SP +
Sbjct: 294  NSLIRRRRLTEVQKLVKNEE-IKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLD 352

Query: 1927 IRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWKG 1751
            +RPAFRH FKT+++  G K+K ++GVIECD L+  GLD +A+HM+IPY+PML+PPKKWKG
Sbjct: 353  VRPAFRHKFKTISRGPGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKG 412

Query: 1750 YDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVLE 1571
            YDKGG+L++PSYVMRTHGS++QQ+A+K    K ++KVFEALDTLGSTKWRVN +VL V+E
Sbjct: 413  YDKGGYLFLPSYVMRTHGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVE 472

Query: 1570 IMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELKL 1391
             +W+ GGN+AGL+DR DIPIPE+P SED T I+EW+W+ RKA K N E H+QRCD ELKL
Sbjct: 473  SIWASGGNIAGLVDRNDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKL 532

Query: 1390 SVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWLK 1211
            SVARKM++EEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLG+SGL WLK
Sbjct: 533  SVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLK 592

Query: 1210 IHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMNL 1031
            IHLAN+Y GGVEKLS+DGRL FV+NH+  IFDSA+NP+NG  WW+ AEDPFQCLAACMNL
Sbjct: 593  IHLANLYSGGVEKLSHDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNL 652

Query: 1030 SDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIAA 851
            S+AL+S SPHS+IS+LPIHQDGSCNGLQHYAALGRD LEAAAVNLVAGEKPADVYS IA 
Sbjct: 653  SEALKSTSPHSMISYLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAV 712

Query: 850  RVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLV 671
            RV +IM +DS KDPAT+P ALLAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL 
Sbjct: 713  RVHNIMKRDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLE 772

Query: 670  ERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTPL 491
            E+G ITDDR+LFSA+CY AKVTL +LGE+FQAAR+IM WLGDCAKVIASEN+PVRWTTPL
Sbjct: 773  EKGHITDDRLLFSAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPL 832

Query: 490  GLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAIA 311
            GLPVVQPY  SERHLIRT+LQVLALQREG+SV V+ Q+TAFPPNFVHSLDGSHMMMTA+A
Sbjct: 833  GLPVVQPYYKSERHLIRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVA 892

Query: 310  CRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSXXXXXXXX 131
            CR AGL FAGVHDSFWTHACDV++MN+ILRE+FVELY +PVLENL ESF+TS        
Sbjct: 893  CRDAGLYFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPP 952

Query: 130  XPKRGNFNLREVIESPYF 77
             P+RGNF+L+ V+   +F
Sbjct: 953  LPERGNFDLQTVLACTFF 970