BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00017043
         (615 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub...   350   5e-94
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial...   348   1e-93
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub...   348   1e-93
ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I sub...   344   2e-92
ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I sub...   343   4e-92
ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub...   320   3e-85
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub...   315   9e-84
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              315   9e-84
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz...   313   4e-83
gb|EEE66008.1| hypothetical protein OsJ_21959 [Oryza sativa Japo...   313   4e-83
gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indi...   313   4e-83
ref|XP_011625527.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   309   7e-82
gb|ERN11762.1| hypothetical protein AMTR_s00022p00245030 [Ambore...   309   7e-82
gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza...   307   3e-81
ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I sub...   305   2e-80
ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I sub...   305   2e-80
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]   304   2e-80
gb|ACN85329.1| putative RNA polymerase A(I) large subunit, parti...   303   5e-80
ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I sub...   303   5e-80
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   300   3e-79

>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Phoenix
            dactylifera]
          Length = 1665

 Score =  350 bits (897), Expect = 5e-94
 Identities = 176/205 (85%), Positives = 182/205 (88%), Gaps = 3/205 (1%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLPTSRG   Q GKGPE +FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 530  RKLPTSRGVLVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGE 589

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQY+VPTSGDPIRGLIQ
Sbjct: 590  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYVVPTSGDPIRGLIQ 649

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHS--GGLSQKVSALSSDDEITPLPPV 83
            DHIVSAVLL KLDTFLTRE+YHQLLYAS +PP A S  G   + V  LSSDDEI PL P 
Sbjct: 650  DHIVSAVLLTKLDTFLTREQYHQLLYASCMPPIASSQPGRFGRNVCTLSSDDEIQPLLPA 709

Query: 82   IWKPKPLWTGKQVVTAILCHITRGR 8
            IWKP PLWTGKQV+TAIL HITRGR
Sbjct: 710  IWKPIPLWTGKQVITAILNHITRGR 734


>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
          Length = 1669

 Score =  348 bits (894), Expect = 1e-93
 Identities = 177/205 (86%), Positives = 182/205 (88%), Gaps = 3/205 (1%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLPTSRG   Q GKGPE +FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 537  RKLPTSRGVLVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGE 596

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ
Sbjct: 597  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 656

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHS--GGLSQKVSALSSDDEITPLPPV 83
            DHIVSAVLL KLDTFLTREEYHQLLYAS +PP A S  G   +KV  LS DDEI PL P 
Sbjct: 657  DHIVSAVLLTKLDTFLTREEYHQLLYASFMPPIASSQPGRFGRKVCILSLDDEIQPLLPA 716

Query: 82   IWKPKPLWTGKQVVTAILCHITRGR 8
            IWKP PLWTGKQV+TAIL HIT+GR
Sbjct: 717  IWKPIPLWTGKQVITAILNHITQGR 741


>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Elaeis
            guineensis]
          Length = 1674

 Score =  348 bits (893), Expect = 1e-93
 Identities = 176/205 (85%), Positives = 182/205 (88%), Gaps = 3/205 (1%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLPTS+G   Q GKGPE +FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 540  RKLPTSKGVLVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGE 599

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQY+VPTSGDPIRGLIQ
Sbjct: 600  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYVVPTSGDPIRGLIQ 659

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHS--GGLSQKVSALSSDDEITPLPPV 83
            DHIVSAVLL KLDTFLTREEYHQLLYAS +PP A S  G   +KV  LSSD EI PL P 
Sbjct: 660  DHIVSAVLLTKLDTFLTREEYHQLLYASFMPPIASSQPGRFGRKVCTLSSDAEIQPLLPA 719

Query: 82   IWKPKPLWTGKQVVTAILCHITRGR 8
            IWKP PLWTGKQV+TAIL HITRGR
Sbjct: 720  IWKPIPLWTGKQVITAILNHITRGR 744


>ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1641

 Score =  344 bits (882), Expect = 2e-92
 Identities = 174/205 (84%), Positives = 181/205 (88%), Gaps = 3/205 (1%)
 Frame = -3

Query: 613  RKLPTSRG-TTQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLPTSRG T Q G GPE +FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 514  RKLPTSRGMTAQLGTGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGE 573

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSG PIRGLIQ
Sbjct: 574  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGHPIRGLIQ 633

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHS--GGLSQKVSALSSDDEITPLPPV 83
            DHIVSAVLL K+DTFLTREEYHQLLYASS+PP ++S      QKVS   SD EI PLPP 
Sbjct: 634  DHIVSAVLLTKMDTFLTREEYHQLLYASSVPPTSYSQRNRFGQKVSVSWSDYEIQPLPPA 693

Query: 82   IWKPKPLWTGKQVVTAILCHITRGR 8
            IWKP PLWTGKQV+TAIL  +TRGR
Sbjct: 694  IWKPTPLWTGKQVITAILNFVTRGR 718


>ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1640

 Score =  343 bits (880), Expect = 4e-92
 Identities = 173/204 (84%), Positives = 180/204 (88%), Gaps = 3/204 (1%)
 Frame = -3

Query: 613  RKLPTSRG-TTQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLPTSRG T Q G GPE +FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 518  RKLPTSRGMTAQLGMGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGE 577

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSG PIRGLIQ
Sbjct: 578  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGHPIRGLIQ 637

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHS--GGLSQKVSALSSDDEITPLPPV 83
            DHIVSAVLL K+DTFLTREEYHQLLYAS +PP ++S   G  QKVS   SD EI PLPP 
Sbjct: 638  DHIVSAVLLTKMDTFLTREEYHQLLYASCVPPTSYSQRNGFGQKVSVSWSDYEIQPLPPA 697

Query: 82   IWKPKPLWTGKQVVTAILCHITRG 11
            IWKP PLWTGKQV+TAIL  +TRG
Sbjct: 698  IWKPTPLWTGKQVITAILNFVTRG 721


>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
            nucifera]
          Length = 1676

 Score =  320 bits (821), Expect = 3e-85
 Identities = 157/207 (75%), Positives = 178/207 (85%), Gaps = 4/207 (1%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLP+SRG  TQ GK  EY+FEGKVVYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GE
Sbjct: 555  RKLPSSRGAVTQPGKNLEYEFEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE 614

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KT+RMHYANCSTYNADFDGDEMNVH PQDEISRAEA NIVNANKQY+VPTSG PIRGLIQ
Sbjct: 615  KTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANKQYVVPTSGQPIRGLIQ 674

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAA---HSGGLSQKVSALSSDDEITPLPP 86
            DHI+SAVLL K DTFLTR+E+ QLLY+S +   A     G   QK+S ++S++E+ P+ P
Sbjct: 675  DHIISAVLLTKRDTFLTRDEFSQLLYSSGVSATALGYFVGKPGQKISTINSEEELEPVLP 734

Query: 85   VIWKPKPLWTGKQVVTAILCHITRGRS 5
             IWKP+PLWTGKQV+TA+L HITRGR+
Sbjct: 735  AIWKPEPLWTGKQVITAVLNHITRGRT 761


>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
            vinifera]
          Length = 1691

 Score =  315 bits (808), Expect = 9e-84
 Identities = 157/205 (76%), Positives = 175/205 (85%), Gaps = 3/205 (1%)
 Frame = -3

Query: 613  RKLPTSRGTT-QSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLP+SRG   Q G+  + +FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GE
Sbjct: 545  RKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE 604

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KTLRMHYANCSTYNADFDGDEMNVH PQDEISRAEA NIVNAN QYIVP+ GDPIRGLIQ
Sbjct: 605  KTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQ 664

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHS--GGLSQKVSALSSDDEITPLPPV 83
            DHIVSAVLL K DTFLTRE+Y+QLLY+S L   + S  G   +KVS L S+DE+ PL P 
Sbjct: 665  DHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIGKPGKKVSVLDSEDEMQPLLPA 724

Query: 82   IWKPKPLWTGKQVVTAILCHITRGR 8
            IWKP+PLW+GKQV+TA+L HITRGR
Sbjct: 725  IWKPEPLWSGKQVITAVLNHITRGR 749


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  315 bits (808), Expect = 9e-84
 Identities = 157/205 (76%), Positives = 175/205 (85%), Gaps = 3/205 (1%)
 Frame = -3

Query: 613  RKLPTSRGTT-QSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLP+SRG   Q G+  + +FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GE
Sbjct: 523  RKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE 582

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KTLRMHYANCSTYNADFDGDEMNVH PQDEISRAEA NIVNAN QYIVP+ GDPIRGLIQ
Sbjct: 583  KTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQ 642

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHS--GGLSQKVSALSSDDEITPLPPV 83
            DHIVSAVLL K DTFLTRE+Y+QLLY+S L   + S  G   +KVS L S+DE+ PL P 
Sbjct: 643  DHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIGKPGKKVSVLDSEDEMQPLLPA 702

Query: 82   IWKPKPLWTGKQVVTAILCHITRGR 8
            IWKP+PLW+GKQV+TA+L HITRGR
Sbjct: 703  IWKPEPLWSGKQVITAVLNHITRGR 727


>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
            Group]
          Length = 1748

 Score =  313 bits (803), Expect = 4e-83
 Identities = 150/203 (73%), Positives = 171/203 (84%), Gaps = 1/203 (0%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            + LP SRG+ +Q GK P+ +FE KVVYRHLQDGD+VLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 523  KMLPASRGSISQPGKDPKCEFESKVVYRHLQDGDVVLVNRQPTLHKPSMMAHVVRVLPGE 582

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KT+RMHYANCSTYNADFDGDEMNVH PQDEISRAEAINIV+ANKQYI P SGD +RGLIQ
Sbjct: 583  KTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQYIGPRSGDAVRGLIQ 642

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHSGGLSQKVSALSSDDEITPLPPVIW 77
            DHI+ AVLL KLDTFL+REEY+QL+Y S L     SG   +K+S +  DD + P+PP IW
Sbjct: 643  DHIIGAVLLTKLDTFLSREEYNQLVYGSVLSSTRRSGQFGKKISIIMDDDALEPVPPAIW 702

Query: 76   KPKPLWTGKQVVTAILCHITRGR 8
            KPKPLWTGKQV+T IL H+T+GR
Sbjct: 703  KPKPLWTGKQVITTILNHVTKGR 725


>gb|EEE66008.1| hypothetical protein OsJ_21959 [Oryza sativa Japonica Group]
          Length = 994

 Score =  313 bits (803), Expect = 4e-83
 Identities = 150/203 (73%), Positives = 171/203 (84%), Gaps = 1/203 (0%)
 Frame = -3

Query: 613 RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
           + LP SRG+ +Q GK P+ +FE KVVYRHLQDGD+VLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 305 KMLPASRGSISQPGKDPKCEFESKVVYRHLQDGDVVLVNRQPTLHKPSMMAHVVRVLPGE 364

Query: 436 KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
           KT+RMHYANCSTYNADFDGDEMNVH PQDEISRAEAINIV+ANKQYI P SGD +RGLIQ
Sbjct: 365 KTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQYIGPRSGDAVRGLIQ 424

Query: 256 DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHSGGLSQKVSALSSDDEITPLPPVIW 77
           DHI+ AVLL KLDTFL+REEY+QL+Y S L     SG   +K+S +  DD + P+PP IW
Sbjct: 425 DHIIGAVLLTKLDTFLSREEYNQLVYGSVLSSTRRSGQFGKKISIIMDDDALEPVPPAIW 484

Query: 76  KPKPLWTGKQVVTAILCHITRGR 8
           KPKPLWTGKQV+T IL H+T+GR
Sbjct: 485 KPKPLWTGKQVITTILNHVTKGR 507


>gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indica Group]
          Length = 1350

 Score =  313 bits (803), Expect = 4e-83
 Identities = 150/203 (73%), Positives = 171/203 (84%), Gaps = 1/203 (0%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            + LP SRG+ +Q GK P+ +FE KVVYRHLQDGD+VLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 592  KMLPASRGSISQPGKDPKCEFESKVVYRHLQDGDVVLVNRQPTLHKPSMMAHVVRVLPGE 651

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KT+RMHYANCSTYNADFDGDEMNVH PQDEISRAEAINIV+ANKQYI P SGD +RGLIQ
Sbjct: 652  KTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQYIGPRSGDAVRGLIQ 711

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHSGGLSQKVSALSSDDEITPLPPVIW 77
            DHI+ AVLL KLDTFL+REEY+QL+Y S L     SG   +K+S +  DD + P+PP IW
Sbjct: 712  DHIIGAVLLTKLDTFLSREEYNQLVYGSVLSSTRRSGQFGKKISIIMDDDALEPVPPAIW 771

Query: 76   KPKPLWTGKQVVTAILCHITRGR 8
            KPKPLWTGKQV+T IL H+T+GR
Sbjct: 772  KPKPLWTGKQVITTILNHVTKGR 794


>ref|XP_011625527.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            rpa1 [Amborella trichopoda]
          Length = 1605

 Score =  309 bits (792), Expect = 7e-82
 Identities = 151/202 (74%), Positives = 171/202 (84%), Gaps = 3/202 (1%)
 Frame = -3

Query: 604  PTSRGTTQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLR 425
            P +  T  SGKG   +FEGKVVYRH+QDGDIVLVNRQPTLHKPSMMAHV R+L GEKTLR
Sbjct: 469  PGAVSTDVSGKGFNSNFEGKVVYRHIQDGDIVLVNRQPTLHKPSMMAHVARILKGEKTLR 528

Query: 424  MHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQDHIV 245
            MHYANCS+YNADFDGDEMNVH PQDEI+RAEA NIVNAN+QYIVPTSG+PIRGLIQDHIV
Sbjct: 529  MHYANCSSYNADFDGDEMNVHFPQDEIARAEAYNIVNANEQYIVPTSGEPIRGLIQDHIV 588

Query: 244  SAVLLCKLDTFLTREEYHQLLYA---SSLPPAAHSGGLSQKVSALSSDDEITPLPPVIWK 74
            SAVLL K DTFLT+EEYH LLY+   S++ P    G LS+K+S + SD+EI PL P IWK
Sbjct: 589  SAVLLTKKDTFLTQEEYHHLLYSACVSTVAPDFKHGNLSKKISLVKSDEEIRPLLPAIWK 648

Query: 73   PKPLWTGKQVVTAILCHITRGR 8
            PKPLWTGKQV++ IL H+TRG+
Sbjct: 649  PKPLWTGKQVISTILDHVTRGQ 670


>gb|ERN11762.1| hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
          Length = 1600

 Score =  309 bits (792), Expect = 7e-82
 Identities = 151/202 (74%), Positives = 171/202 (84%), Gaps = 3/202 (1%)
 Frame = -3

Query: 604  PTSRGTTQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLR 425
            P +  T  SGKG   +FEGKVVYRH+QDGDIVLVNRQPTLHKPSMMAHV R+L GEKTLR
Sbjct: 464  PGAVSTDVSGKGFNSNFEGKVVYRHIQDGDIVLVNRQPTLHKPSMMAHVARILKGEKTLR 523

Query: 424  MHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQDHIV 245
            MHYANCS+YNADFDGDEMNVH PQDEI+RAEA NIVNAN+QYIVPTSG+PIRGLIQDHIV
Sbjct: 524  MHYANCSSYNADFDGDEMNVHFPQDEIARAEAYNIVNANEQYIVPTSGEPIRGLIQDHIV 583

Query: 244  SAVLLCKLDTFLTREEYHQLLYA---SSLPPAAHSGGLSQKVSALSSDDEITPLPPVIWK 74
            SAVLL K DTFLT+EEYH LLY+   S++ P    G LS+K+S + SD+EI PL P IWK
Sbjct: 584  SAVLLTKKDTFLTQEEYHHLLYSACVSTVAPDFKHGNLSKKISLVKSDEEIRPLLPAIWK 643

Query: 73   PKPLWTGKQVVTAILCHITRGR 8
            PKPLWTGKQV++ IL H+TRG+
Sbjct: 644  PKPLWTGKQVISTILDHVTRGQ 665


>gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza coarctata]
          Length = 1830

 Score =  307 bits (787), Expect = 3e-81
 Identities = 151/203 (74%), Positives = 170/203 (83%), Gaps = 2/203 (0%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            + LP SRG+ +Q GK P+ +FE KVVYRHLQDGDIVLVNRQPTLHKPSMMAH VRVL GE
Sbjct: 514  KMLPASRGSISQPGKDPKCEFESKVVYRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGE 573

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KT+RMHYANCSTYNADFDGDEMNVH PQDEISRAEAINIV+ANKQYI P SGD +RGLIQ
Sbjct: 574  KTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQYIGPRSGDAVRGLIQ 633

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASS-LPPAAHSGGLSQKVSALSSDDEITPLPPVI 80
            DHIV AVLL KLDTFL+REEY+QL+Y S  L  A  SG   +K+S +  DD + P+PP I
Sbjct: 634  DHIVGAVLLTKLDTFLSREEYNQLVYGSCVLSSARRSGQFGKKISIIMDDDVLEPVPPAI 693

Query: 79   WKPKPLWTGKQVVTAILCHITRG 11
            WKPKPLWTGKQV+T IL H+T+G
Sbjct: 694  WKPKPLWTGKQVITTILNHVTKG 716


>ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
            sylvestris]
          Length = 1681

 Score =  305 bits (780), Expect = 2e-80
 Identities = 150/205 (73%), Positives = 171/205 (83%), Gaps = 4/205 (1%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLP+SRG  TQSG+  EY+FEGKVVYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GE
Sbjct: 536  RKLPSSRGAVTQSGRNDEYEFEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE 595

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KTLRMHYANCSTYNADFDGDEMNVH PQDEISRAEA NIVNAN+QYIVPT GD +RGLIQ
Sbjct: 596  KTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQ 655

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSL---PPAAHSGGLSQKVSALSSDDEITPLPP 86
            DHIV AVLL   +TFLT +E++QLLY S +    P + SG  S KVS + S+  +  + P
Sbjct: 656  DHIVGAVLLTMKNTFLTLQEFNQLLYGSGVFAAGPGSTSGNHSNKVSVVDSEGVVQTILP 715

Query: 85   VIWKPKPLWTGKQVVTAILCHITRG 11
             +WKPKPLWTGKQV+TA+L H+T+G
Sbjct: 716  AVWKPKPLWTGKQVITALLNHLTKG 740


>ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
            tomentosiformis]
          Length = 1938

 Score =  305 bits (780), Expect = 2e-80
 Identities = 150/205 (73%), Positives = 171/205 (83%), Gaps = 4/205 (1%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLP+SRG  TQSG+  EY+FEGKVVYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GE
Sbjct: 793  RKLPSSRGAVTQSGRNDEYEFEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE 852

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KTLRMHYANCSTYNADFDGDEMNVH PQDEISRAEA NIVNAN+QYIVPT GD +RGLIQ
Sbjct: 853  KTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQ 912

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSL---PPAAHSGGLSQKVSALSSDDEITPLPP 86
            DHIV AVLL   +TFLT +E++QLLY S +    P + SG  S KVS + S+  +  + P
Sbjct: 913  DHIVGAVLLTMKNTFLTLQEFNQLLYGSGVFAAGPGSTSGNHSNKVSVVDSEGVVQTILP 972

Query: 85   VIWKPKPLWTGKQVVTAILCHITRG 11
             +WKPKPLWTGKQV+TA+L H+T+G
Sbjct: 973  AVWKPKPLWTGKQVITALLNHLTKG 997


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  304 bits (779), Expect = 2e-80
 Identities = 157/223 (70%), Positives = 175/223 (78%), Gaps = 21/223 (9%)
 Frame = -3

Query: 613  RKLPTSRGTT-QSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLP+SRG   Q G+  + +FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GE
Sbjct: 642  RKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE 701

Query: 436  KTLRMHYANC------------------STYNADFDGDEMNVHLPQDEISRAEAINIVNA 311
            KTLRMHYANC                  STYNADFDGDEMNVH PQDEISRAEA NIVNA
Sbjct: 702  KTLRMHYANCRVESEHISMLDLDDCSDSSTYNADFDGDEMNVHFPQDEISRAEAYNIVNA 761

Query: 310  NKQYIVPTSGDPIRGLIQDHIVSAVLLCKLDTFLTREEYHQLLYASSLPPAAHS--GGLS 137
            N QYIVP+ GDPIRGLIQDHIVSAVLL K DTFLTRE+Y+QLLY+S L   + S  G   
Sbjct: 762  NNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIGKPG 821

Query: 136  QKVSALSSDDEITPLPPVIWKPKPLWTGKQVVTAILCHITRGR 8
            +KVS L S+DE+ PL P IWKP+PLW+GKQV+TA+L HITRGR
Sbjct: 822  KKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGR 864


>gb|ACN85329.1| putative RNA polymerase A(I) large subunit, partial [Oryza
            brachyantha]
          Length = 1138

 Score =  303 bits (776), Expect = 5e-80
 Identities = 147/203 (72%), Positives = 169/203 (83%), Gaps = 2/203 (0%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            + LP SRG+ +Q+GK P+ +FE KVVYRHLQDGD+VLVNRQPTLHKPSMMAH VRVL GE
Sbjct: 515  KMLPASRGSISQAGKDPKCEFESKVVYRHLQDGDVVLVNRQPTLHKPSMMAHFVRVLPGE 574

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KT+RMHYANCSTYNADFDGDEMNVH PQDEISRAEAINIV+ANKQYI P SGD +RGLIQ
Sbjct: 575  KTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQYIGPRSGDAVRGLIQ 634

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSL-PPAAHSGGLSQKVSALSSDDEITPLPPVI 80
            DHIV AVLL KLDTFL+REEY+QL+Y S +      S    +K+S +  DD + P+PP I
Sbjct: 635  DHIVGAVLLTKLDTFLSREEYNQLVYGSCVFSSTRRSAKFGKKISIIMDDDALEPVPPAI 694

Query: 79   WKPKPLWTGKQVVTAILCHITRG 11
            WKPKPLWTGKQV+T IL H+T+G
Sbjct: 695  WKPKPLWTGKQVITTILNHVTKG 717


>ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Oryza
            brachyantha]
          Length = 1755

 Score =  303 bits (776), Expect = 5e-80
 Identities = 147/203 (72%), Positives = 169/203 (83%), Gaps = 2/203 (0%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            + LP SRG+ +Q+GK P+ +FE KVVYRHLQDGD+VLVNRQPTLHKPSMMAH VRVL GE
Sbjct: 515  KMLPASRGSISQAGKDPKCEFESKVVYRHLQDGDVVLVNRQPTLHKPSMMAHFVRVLPGE 574

Query: 436  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQ 257
            KT+RMHYANCSTYNADFDGDEMNVH PQDEISRAEAINIV+ANKQYI P SGD +RGLIQ
Sbjct: 575  KTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQYIGPRSGDAVRGLIQ 634

Query: 256  DHIVSAVLLCKLDTFLTREEYHQLLYASSL-PPAAHSGGLSQKVSALSSDDEITPLPPVI 80
            DHIV AVLL KLDTFL+REEY+QL+Y S +      S    +K+S +  DD + P+PP I
Sbjct: 635  DHIVGAVLLTKLDTFLSREEYNQLVYGSCVFSSTRRSAKFGKKISIIMDDDALEPVPPAI 694

Query: 79   WKPKPLWTGKQVVTAILCHITRG 11
            WKPKPLWTGKQV+T IL H+T+G
Sbjct: 695  WKPKPLWTGKQVITTILNHVTKG 717


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  300 bits (769), Expect = 3e-79
 Identities = 150/204 (73%), Positives = 174/204 (85%), Gaps = 5/204 (2%)
 Frame = -3

Query: 613  RKLPTSRGT-TQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 437
            RKLP+SRG  TQ+GKG E +FEGK+VYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVL GE
Sbjct: 522  RKLPSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGE 581

Query: 436  KTLRMHYANCS-TYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLI 260
            KTLRMHYANCS TYNADFDGDEMNVH PQDE+SRAEA NIVNAN Q++ P++G+P+RGLI
Sbjct: 582  KTLRMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLI 641

Query: 259  QDHIVSAVLLCKLDTFLTREEYHQLLYA---SSLPPAAHSGGLSQKVSALSSDDEITPLP 89
            QDHIVSAVLL K DTFL+++E++QLLY+   S++ P +  G   QKV    S+DEI  LP
Sbjct: 642  QDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLP 701

Query: 88   PVIWKPKPLWTGKQVVTAILCHIT 17
            P IWKPKPLWTGKQV+TAIL HIT
Sbjct: 702  PAIWKPKPLWTGKQVITAILNHIT 725