BLASTX nr result
ID: Ophiopogon21_contig00017019
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00017019
(1338 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008793120.1| PREDICTED: uncharacterized protein LOC103709... 465 e-128
ref|XP_008793119.1| PREDICTED: uncharacterized protein LOC103709... 465 e-128
ref|XP_010924543.1| PREDICTED: DNA-directed RNA polymerase III s... 456 e-125
ref|XP_008793122.1| PREDICTED: uncharacterized protein LOC103709... 454 e-124
ref|XP_009406215.1| PREDICTED: uncharacterized protein LOC103989... 449 e-123
ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III s... 345 7e-92
ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III s... 345 7e-92
ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III s... 337 1e-89
gb|KQK09186.1| hypothetical protein BRADI_2g46550 [Brachypodium ... 337 2e-89
ref|XP_003569562.1| PREDICTED: DNA-directed RNA polymerase III s... 337 2e-89
ref|XP_004969534.1| PREDICTED: DNA-directed RNA polymerase III s... 334 1e-88
ref|XP_008675378.1| PREDICTED: DNA-directed RNA polymerase III s... 333 2e-88
ref|NP_001043863.1| Os01g0679000 [Oryza sativa Japonica Group] g... 331 8e-88
tpg|DAA58620.1| TPA: hypothetical protein ZEAMMB73_769576 [Zea m... 331 8e-88
emb|CBH32599.1| RNA polymerase III subunit RPC82 domain containi... 329 3e-87
ref|XP_002456140.1| hypothetical protein SORBIDRAFT_03g031160 [S... 328 5e-87
ref|XP_006652166.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 311 6e-82
ref|XP_009627999.1| PREDICTED: DNA-directed RNA polymerase III s... 311 8e-82
ref|XP_009627995.1| PREDICTED: DNA-directed RNA polymerase III s... 310 1e-81
dbj|BAJ96220.1| predicted protein, partial [Hordeum vulgare subs... 310 1e-81
>ref|XP_008793120.1| PREDICTED: uncharacterized protein LOC103709507 isoform X2 [Phoenix
dactylifera]
Length = 437
Score = 465 bits (1196), Expect = e-128
Identities = 242/415 (58%), Positives = 305/415 (73%), Gaps = 3/415 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
M A+ G+ LAV LI +HFGDLV++VC CLL+RGTLS QE++R EL +S
Sbjct: 1 MAAQCGLKLAVSLITAHFGDLVAKVCSCLLHRGTLSLQEIIRFTEL-------SSSQIKN 53
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
L+QHNCVQAFS P+ G GG K T Y+AL +NILHR+RFAKFL +VR DLGP+C
Sbjct: 54 CLLVLVQHNCVQAFSTPRPAGPGGVAKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPQC 113
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPE---AMRDNLRTSFNLLVHAQYVERCPKSDPFI 737
E LL GLLQ+GRLTF QLV RA+S +PE +MR+ LR +FN LV A+YVERCP+ +PFI
Sbjct: 114 EILLAGLLQNGRLTFGQLVERATSSKPEVSASMREGLRANFNRLVSARYVERCPRPEPFI 173
Query: 736 TPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKET 557
P+ +ET S + R +K S EQ+AM+AA LSDAERF I++T TI + K T
Sbjct: 174 EPSPQEETRSTRRRSAKTSEEILSIEQRAMVAAALSDAERFSEITDTATETI---EVKAT 230
Query: 556 EHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFSI 377
+H S VS GDKRK+ +E+D +V A IT+NE+LW+ANFEKF+ CLKKKACV ++RSRF +
Sbjct: 231 DHSSDVSVGDKRKYGALEMDQEVQAAITQNEVLWQANFEKFLLCLKKKACVAHVRSRFGL 290
Query: 376 DAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCRL 197
DAG VLEAMIES+ KA D V A+MD+IL GVR KPGGI MTLEH+R+IL+Q+ C+
Sbjct: 291 DAGAVLEAMIESSGQQKAKDETPVRATMDSILEGVRAKPGGISMTLEHIRVILDQLHCQS 350
Query: 196 CTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
C +GA Y+IDLK I+TCQN+EVE+LVL R+GKEAYRIFRLL+K+G ETD+
Sbjct: 351 CNWGAGASYSIDLKSIIDTCQNDEVEALVLTRFGKEAYRIFRLLIKNGHPFETDR 405
>ref|XP_008793119.1| PREDICTED: uncharacterized protein LOC103709507 isoform X1 [Phoenix
dactylifera]
Length = 518
Score = 465 bits (1196), Expect = e-128
Identities = 242/415 (58%), Positives = 305/415 (73%), Gaps = 3/415 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
M A+ G+ LAV LI +HFGDLV++VC CLL+RGTLS QE++R EL +S
Sbjct: 1 MAAQCGLKLAVSLITAHFGDLVAKVCSCLLHRGTLSLQEIIRFTEL-------SSSQIKN 53
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
L+QHNCVQAFS P+ G GG K T Y+AL +NILHR+RFAKFL +VR DLGP+C
Sbjct: 54 CLLVLVQHNCVQAFSTPRPAGPGGVAKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPQC 113
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPE---AMRDNLRTSFNLLVHAQYVERCPKSDPFI 737
E LL GLLQ+GRLTF QLV RA+S +PE +MR+ LR +FN LV A+YVERCP+ +PFI
Sbjct: 114 EILLAGLLQNGRLTFGQLVERATSSKPEVSASMREGLRANFNRLVSARYVERCPRPEPFI 173
Query: 736 TPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKET 557
P+ +ET S + R +K S EQ+AM+AA LSDAERF I++T TI + K T
Sbjct: 174 EPSPQEETRSTRRRSAKTSEEILSIEQRAMVAAALSDAERFSEITDTATETI---EVKAT 230
Query: 556 EHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFSI 377
+H S VS GDKRK+ +E+D +V A IT+NE+LW+ANFEKF+ CLKKKACV ++RSRF +
Sbjct: 231 DHSSDVSVGDKRKYGALEMDQEVQAAITQNEVLWQANFEKFLLCLKKKACVAHVRSRFGL 290
Query: 376 DAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCRL 197
DAG VLEAMIES+ KA D V A+MD+IL GVR KPGGI MTLEH+R+IL+Q+ C+
Sbjct: 291 DAGAVLEAMIESSGQQKAKDETPVRATMDSILEGVRAKPGGISMTLEHIRVILDQLHCQS 350
Query: 196 CTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
C +GA Y+IDLK I+TCQN+EVE+LVL R+GKEAYRIFRLL+K+G ETD+
Sbjct: 351 CNWGAGASYSIDLKSIIDTCQNDEVEALVLTRFGKEAYRIFRLLIKNGHPFETDR 405
>ref|XP_010924543.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Elaeis
guineensis]
Length = 518
Score = 456 bits (1174), Expect = e-125
Identities = 238/415 (57%), Positives = 298/415 (71%), Gaps = 3/415 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
M + G+ LAV LI +HFGDLV++VC CLL+RGTL+ QE++R EL +S
Sbjct: 1 MAGQCGLKLAVSLITTHFGDLVAKVCSCLLHRGTLTLQEIIRFTEL-------SSSQVKN 53
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
LIQHNCVQAFS P+ G GG K T Y+AL +NILHR+RFAKFL +VR DLGP C
Sbjct: 54 CLLVLIQHNCVQAFSTPRPAGPGGVTKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPRC 113
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPE---AMRDNLRTSFNLLVHAQYVERCPKSDPFI 737
E LL GLLQ+GRLTF QLV RASS +PE +MR+ LR +FN LV ++YVERCP+ +PFI
Sbjct: 114 EILLAGLLQNGRLTFGQLVERASSNKPEVSASMREGLRANFNRLVSSRYVERCPRPEPFI 173
Query: 736 TPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKET 557
P+ +ET S + R +K S EQQAM+AA LSDAERF I++T I + K T
Sbjct: 174 DPSPQEETRSTRKRSAKTSEEMLSVEQQAMVAAALSDAERFSEITDTSTENI---EVKAT 230
Query: 556 EHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFSI 377
+H VS GDKRK+ +E+D +V A I ENE+LWRANFEKF+ CLKKKACV ++RS+ +
Sbjct: 231 DHDPDVSVGDKRKYGVLEMDQEVQAVIAENEVLWRANFEKFLLCLKKKACVAHVRSKLGL 290
Query: 376 DAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCRL 197
DAG+VLEAMIES+ KA D V A+MD+IL GVR KPGGI MTLEH+R+IL+Q+ C+
Sbjct: 291 DAGVVLEAMIESSGQQKAKDETPVRATMDSILEGVRAKPGGISMTLEHIRVILDQLRCQS 350
Query: 196 CTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
C GA Y+IDLK I+TCQN+EVE+LVL R+GKE YRIFRLL+K+G ETD+
Sbjct: 351 CNWGGGASYSIDLKSIIDTCQNDEVEALVLTRFGKETYRIFRLLIKNGHPFETDR 405
>ref|XP_008793122.1| PREDICTED: uncharacterized protein LOC103709507 isoform X3 [Phoenix
dactylifera]
Length = 416
Score = 454 bits (1167), Expect = e-124
Identities = 236/405 (58%), Positives = 297/405 (73%), Gaps = 3/405 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
M A+ G+ LAV LI +HFGDLV++VC CLL+RGTLS QE++R EL +S
Sbjct: 1 MAAQCGLKLAVSLITAHFGDLVAKVCSCLLHRGTLSLQEIIRFTEL-------SSSQIKN 53
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
L+QHNCVQAFS P+ G GG K T Y+AL +NILHR+RFAKFL +VR DLGP+C
Sbjct: 54 CLLVLVQHNCVQAFSTPRPAGPGGVAKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPQC 113
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPE---AMRDNLRTSFNLLVHAQYVERCPKSDPFI 737
E LL GLLQ+GRLTF QLV RA+S +PE +MR+ LR +FN LV A+YVERCP+ +PFI
Sbjct: 114 EILLAGLLQNGRLTFGQLVERATSSKPEVSASMREGLRANFNRLVSARYVERCPRPEPFI 173
Query: 736 TPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKET 557
P+ +ET S + R +K S EQ+AM+AA LSDAERF I++T TI + K T
Sbjct: 174 EPSPQEETRSTRRRSAKTSEEILSIEQRAMVAAALSDAERFSEITDTATETI---EVKAT 230
Query: 556 EHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFSI 377
+H S VS GDKRK+ +E+D +V A IT+NE+LW+ANFEKF+ CLKKKACV ++RSRF +
Sbjct: 231 DHSSDVSVGDKRKYGALEMDQEVQAAITQNEVLWQANFEKFLLCLKKKACVAHVRSRFGL 290
Query: 376 DAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCRL 197
DAG VLEAMIES+ KA D V A+MD+IL GVR KPGGI MTLEH+R+IL+Q+ C+
Sbjct: 291 DAGAVLEAMIESSGQQKAKDETPVRATMDSILEGVRAKPGGISMTLEHIRVILDQLHCQS 350
Query: 196 CTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLV 62
C +GA Y+IDLK I+TCQN+EVE+LVL R+GKEAYRIFRL +
Sbjct: 351 CNWGAGASYSIDLKSIIDTCQNDEVEALVLTRFGKEAYRIFRLRI 395
>ref|XP_009406215.1| PREDICTED: uncharacterized protein LOC103989158 [Musa acuminata
subsp. malaccensis]
Length = 516
Score = 449 bits (1154), Expect = e-123
Identities = 239/417 (57%), Positives = 297/417 (71%), Gaps = 5/417 (1%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPAD--NGRNSXXX 1094
MV++ ++LAV L+ SHFGDLV++VC CLL GTLS QE++R EL + NG
Sbjct: 1 MVSQDALNLAVSLMTSHFGDLVAKVCGCLLQGGTLSLQEIVRCTELSNSQVKNG------ 54
Query: 1093 XXXXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGP 914
LIQHNCVQAFSVPK G GGA K T Y+AL +NILHR+RF KFL IVR DLGP
Sbjct: 55 ---LLVLIQHNCVQAFSVPKQAGAGGATKSLTQYMALFDNILHRMRFTKFLAIVRDDLGP 111
Query: 913 ECETLLEGLLQHGRLTFDQLVHRASSKQPE---AMRDNLRTSFNLLVHAQYVERCPKSDP 743
+CETLLEGLLQHGRLTFDQLV RA+SKQ E ++RD LR + LVH QYVERCP+ +P
Sbjct: 112 QCETLLEGLLQHGRLTFDQLVVRATSKQSEDSSSIRDVLRKNLERLVHGQYVERCPRPEP 171
Query: 742 FITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEK 563
FI P S + T S + R +K+ S EQQAM+AA LS AERF I+++G ++ +
Sbjct: 172 FIAPTSEEGTASARRRSAKSKEETYSLEQQAMIAAALSHAERFSVITDSGR----ESSDV 227
Query: 562 ETEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRF 383
+ VS GDKRK +E+D +V A ITE E+LWRANF+KFVHCL+KKACV N+RSR
Sbjct: 228 KDADKQDVSVGDKRKFEVLELDEEVQAAITETEVLWRANFQKFVHCLEKKACVANVRSRL 287
Query: 382 SIDAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGC 203
+DAG+VLEA++ES+ K N V ASMD IL VRGKPGGI MTLEH+RI+L+Q+GC
Sbjct: 288 GLDAGVVLEALVESSDQEKD---NFVKASMDGILEAVRGKPGGISMTLEHIRIVLDQLGC 344
Query: 202 RLCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
E++ Y ++++ IE+CQN+EVESLVL RYGKEAYRIFRLL+K G ET+Q
Sbjct: 345 SSSIEDNNVFYKMEVQCIIESCQNDEVESLVLSRYGKEAYRIFRLLIKKGSLVETEQ 401
>ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X2
[Vitis vinifera]
Length = 429
Score = 345 bits (884), Expect = 7e-92
Identities = 200/420 (47%), Positives = 264/420 (62%), Gaps = 8/420 (1%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
M ++G+ LAV LI SHFG+LV++VC+CLL +GTL+ ++R EL P
Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQ-------VKS 53
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
LIQHNCVQAF++ + G G A + T Y+AL NILHR+RFAKFL IV +L EC
Sbjct: 54 CILVLIQHNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKEC 113
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPE---AMRDNLRTSFNLLVHAQYVERCPKSDPFI 737
E +LEGLLQHGRLT +Q++ RA S Q E ++D LR SF LV A +VERCP S+PF+
Sbjct: 114 EEILEGLLQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFL 173
Query: 736 TPNSVDETTSGKGRGSKAG---VSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKE 566
P S +ET + K RG+K+ P + EQ+A+ AA DA+RF I NTG T +D+
Sbjct: 174 APPSEEETPARK-RGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTG--TDVDDS- 229
Query: 565 KETEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSR 386
+V+AG+KRK +E+D + A+ E ++LWRANFE+FV CL+ KAC+ N+++R
Sbjct: 230 ------PNVTAGEKRKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTR 282
Query: 385 FSIDAGIVLEAMIESNCN--NKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQ 212
A IVL AM+E+ + K NSV SMD I GV G MTLE VR L Q
Sbjct: 283 LDDGAAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQ 342
Query: 211 IGCRLCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
+GC C + Y++DLK IE QN+EVES+ LKRYG++AYRIFRLL K ETD+
Sbjct: 343 LGCAPCVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDK 402
>ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Vitis vinifera] gi|302143859|emb|CBI22720.3| unnamed
protein product [Vitis vinifera]
Length = 524
Score = 345 bits (884), Expect = 7e-92
Identities = 200/420 (47%), Positives = 264/420 (62%), Gaps = 8/420 (1%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
M ++G+ LAV LI SHFG+LV++VC+CLL +GTL+ ++R EL P
Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQ-------VKS 53
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
LIQHNCVQAF++ + G G A + T Y+AL NILHR+RFAKFL IV +L EC
Sbjct: 54 CILVLIQHNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKEC 113
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPE---AMRDNLRTSFNLLVHAQYVERCPKSDPFI 737
E +LEGLLQHGRLT +Q++ RA S Q E ++D LR SF LV A +VERCP S+PF+
Sbjct: 114 EEILEGLLQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFL 173
Query: 736 TPNSVDETTSGKGRGSKAG---VSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKE 566
P S +ET + K RG+K+ P + EQ+A+ AA DA+RF I NTG T +D+
Sbjct: 174 APPSEEETPARK-RGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTG--TDVDDS- 229
Query: 565 KETEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSR 386
+V+AG+KRK +E+D + A+ E ++LWRANFE+FV CL+ KAC+ N+++R
Sbjct: 230 ------PNVTAGEKRKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTR 282
Query: 385 FSIDAGIVLEAMIESNCN--NKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQ 212
A IVL AM+E+ + K NSV SMD I GV G MTLE VR L Q
Sbjct: 283 LDDGAAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQ 342
Query: 211 IGCRLCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
+GC C + Y++DLK IE QN+EVES+ LKRYG++AYRIFRLL K ETD+
Sbjct: 343 LGCAPCVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDK 402
>ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo
nucifera]
Length = 531
Score = 337 bits (865), Expect = 1e-89
Identities = 189/418 (45%), Positives = 260/418 (62%), Gaps = 6/418 (1%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
M ++ I LA+ LI SHFGDLV++VCECLL +G+L+ ++ R EL A
Sbjct: 1 MATQYSIKLAISLISSHFGDLVAKVCECLLRKGSLTLADITRFTELPQAQ-------VKN 53
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
LIQHNCVQAFS+ GG G A K T Y A+ +NILHR+RF KFL IV +L EC
Sbjct: 54 CLLVLIQHNCVQAFSIQIEGGVGAAPKVITQYTAIFDNILHRMRFPKFLTIVSEELDKEC 113
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPE---AMRDNLRTSFNLLVHAQYVERCPKSDPFI 737
E +LEGL QHGRLT +Q++ RA S Q E ++D +R SF +V + YVERCP S+PF+
Sbjct: 114 EEILEGLFQHGRLTLEQIILRAVSNQNEGNSTVQDAVRESFVRIVSSHYVERCPASEPFL 173
Query: 736 TPNSVDET-TSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKE 560
P +E T + + ++ + E++A+ AA ++ERF I++TG T + + ++
Sbjct: 174 APPDEEENPTKKRAKSARLAEEIETLEKRAISAAAPLESERFAVITDTG--TDVKSGDRS 231
Query: 559 TEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFS 380
+ + G+KRKH +E+D + ATI E E+LWRANFE F+ L+ KACV N+R+R
Sbjct: 232 GSRFLDTAIGEKRKHEALEMDRETMATICEKEVLWRANFEAFIRRLRHKACVANVRARMD 291
Query: 379 IDAGIVLEAMIES--NCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIG 206
A VL AM+E+ N ++ NSV SMDAIL V GG MT+E VR L Q+G
Sbjct: 292 DGACTVLNAMLEATRNAESRIKTENSVPLSMDAILAEVMKSEGGRSMTVERVRAALGQLG 351
Query: 205 CRLCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
CR + +++DL+ IE QN+E+ES+VLKRYG++AYRIFRLL K G ETD+
Sbjct: 352 CRSSPRGAEDSHSVDLRNIIEIAQNDEMESIVLKRYGRDAYRIFRLLSKTGRLVETDK 409
>gb|KQK09186.1| hypothetical protein BRADI_2g46550 [Brachypodium distachyon]
Length = 496
Score = 337 bits (863), Expect = 2e-89
Identities = 195/416 (46%), Positives = 256/416 (61%), Gaps = 4/416 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV++HGI LAV +I HFG LV++VC+CLL G LS QE++R +EL P +NS
Sbjct: 1 MVSQHGILLAVGIISDHFGPLVAKVCDCLLRHGELSLQEIVRRLELSPGQV-KNSLLVL- 58
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
IQHNCVQAFS PK G + T Y+A+ +N+LHRLRF+KFL ++R+D+ PE
Sbjct: 59 -----IQHNCVQAFSAPK-----GRDRTVTLYLAIFDNVLHRLRFSKFLSVIRADI-PES 107
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPEAM----RDNLRTSFNLLVHAQYVERCPKSDPF 740
E L+EGLLQ+GRLTFDQLV R SK PE R+ +R + N LVHA +VERCPK +PF
Sbjct: 108 EVLIEGLLQNGRLTFDQLVGRTISKVPEGSIRPAREEIRMNLNKLVHAHFVERCPKPEPF 167
Query: 739 ITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKE 560
I P V + TS + R K S EQ+ + A LSDAERF I II++
Sbjct: 168 IDPLVVQQPTSSRRRAPKNFEKVISLEQKIVNTADLSDAERFSEIPY-----IIEDASDV 222
Query: 559 TEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFS 380
KRK EVD ++++TI ENE+LWRANFE+F CLKKK C + + +
Sbjct: 223 NGCSRDPVDSAKRKRGAFEVDEELNSTIAENEVLWRANFEQFTFCLKKKFCADRKKLKLK 282
Query: 379 IDAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCR 200
+ + E+ E+N K TD SVT+ ++ IL +R K GG MTL+ V +LE + C
Sbjct: 283 VGTHPIWESFCEANLTEKDTD--SVTSPINGILERLRQKEGGASMTLDQVTRVLEDLQCT 340
Query: 199 LCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
E A YT DL+ +E+C+NEE+ESLV K+YG+ A+ IFRLLV GG ETDQ
Sbjct: 341 TSNENPEA-YTFDLRKMVESCRNEEIESLVKKKYGQAAFTIFRLLVTQGGPVETDQ 395
>ref|XP_003569562.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Brachypodium
distachyon] gi|944073701|gb|KQK09185.1| hypothetical
protein BRADI_2g46550 [Brachypodium distachyon]
Length = 505
Score = 337 bits (863), Expect = 2e-89
Identities = 195/416 (46%), Positives = 256/416 (61%), Gaps = 4/416 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV++HGI LAV +I HFG LV++VC+CLL G LS QE++R +EL P +NS
Sbjct: 1 MVSQHGILLAVGIISDHFGPLVAKVCDCLLRHGELSLQEIVRRLELSPGQV-KNSLLVL- 58
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
IQHNCVQAFS PK G + T Y+A+ +N+LHRLRF+KFL ++R+D+ PE
Sbjct: 59 -----IQHNCVQAFSAPK-----GRDRTVTLYLAIFDNVLHRLRFSKFLSVIRADI-PES 107
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPEAM----RDNLRTSFNLLVHAQYVERCPKSDPF 740
E L+EGLLQ+GRLTFDQLV R SK PE R+ +R + N LVHA +VERCPK +PF
Sbjct: 108 EVLIEGLLQNGRLTFDQLVGRTISKVPEGSIRPAREEIRMNLNKLVHAHFVERCPKPEPF 167
Query: 739 ITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKE 560
I P V + TS + R K S EQ+ + A LSDAERF I II++
Sbjct: 168 IDPLVVQQPTSSRRRAPKNFEKVISLEQKIVNTADLSDAERFSEIPY-----IIEDASDV 222
Query: 559 TEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFS 380
KRK EVD ++++TI ENE+LWRANFE+F CLKKK C + + +
Sbjct: 223 NGCSRDPVDSAKRKRGAFEVDEELNSTIAENEVLWRANFEQFTFCLKKKFCADRKKLKLK 282
Query: 379 IDAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCR 200
+ + E+ E+N K TD SVT+ ++ IL +R K GG MTL+ V +LE + C
Sbjct: 283 VGTHPIWESFCEANLTEKDTD--SVTSPINGILERLRQKEGGASMTLDQVTRVLEDLQCT 340
Query: 199 LCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
E A YT DL+ +E+C+NEE+ESLV K+YG+ A+ IFRLLV GG ETDQ
Sbjct: 341 TSNENPEA-YTFDLRKMVESCRNEEIESLVKKKYGQAAFTIFRLLVTQGGPVETDQ 395
>ref|XP_004969534.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Setaria
italica] gi|514780183|ref|XP_004969535.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc3 [Setaria
italica] gi|514780187|ref|XP_004969536.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc3 [Setaria
italica] gi|944242104|gb|KQL06412.1| hypothetical protein
SETIT_001120mg [Setaria italica]
Length = 506
Score = 334 bits (856), Expect = 1e-88
Identities = 192/416 (46%), Positives = 256/416 (61%), Gaps = 4/416 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV++HGI LAV +I HFG LVS+VC CLL G LS QE++R + G +S
Sbjct: 1 MVSQHGILLAVSIISDHFGPLVSKVCGCLLRHGALSLQEIVRRL-------GLSSGQVKN 53
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
LIQHNCVQA+S P+ GD K T Y+A+ +N+LHRLRF+KFL +VR D+ PE
Sbjct: 54 SLLVLIQHNCVQAYSTPRGSGD----KTVTVYLAIFDNVLHRLRFSKFLSVVRVDI-PES 108
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPEAM----RDNLRTSFNLLVHAQYVERCPKSDPF 740
E LLEGLLQ+GRLTFDQLV RA SK PE R+ +R +FN LV+A YVERCPK +PF
Sbjct: 109 EVLLEGLLQNGRLTFDQLVERAISKIPEGSPKPTREEIRMNFNKLVYAHYVERCPKPEPF 168
Query: 739 ITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKE 560
P ++ TS + R K + S EQ+ + A LSDAERF I + ++
Sbjct: 169 FDPLLDEQPTSTRKRAPKTVEAVLSLEQKIIRTAALSDAERFSEIPYS-----MEGSSNA 223
Query: 559 TEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFS 380
++ + AG KRKH +EVD + + I ENE+LWRANFEKF+ CLKKK C E +++
Sbjct: 224 SDDHHHAVAGGKRKHEALEVDEE-ESIIAENEVLWRANFEKFIFCLKKKFCAERKKTKLK 282
Query: 379 IDAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCR 200
+ + EA +E+N + D +VT+ +D IL V K GG MTL+ + +L + C
Sbjct: 283 LSTLAIWEAFLEANITD--NDNKTVTSPIDGILERVGQKEGGSSMTLDQIISVLNDLEC- 339
Query: 199 LCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
+ T Y DL +ETC+N+EVESLV K++G+ AY IFRLL+K G ETD+
Sbjct: 340 ISTTRDPEQYAFDLNKLVETCRNDEVESLVKKKHGQAAYTIFRLLLKQGCAVETDE 395
>ref|XP_008675378.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Zea mays]
gi|414881486|tpg|DAA58617.1| TPA: hypothetical protein
ZEAMMB73_769576 [Zea mays] gi|414881487|tpg|DAA58618.1|
TPA: hypothetical protein ZEAMMB73_769576 [Zea mays]
gi|414881488|tpg|DAA58619.1| TPA: hypothetical protein
ZEAMMB73_769576 [Zea mays]
Length = 506
Score = 333 bits (854), Expect = 2e-88
Identities = 189/416 (45%), Positives = 260/416 (62%), Gaps = 4/416 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV++HGI LAV +I HFG +VS+VC CLL G LS Q+++R +EL P +NS
Sbjct: 1 MVSQHGILLAVNIISDHFGPIVSKVCGCLLRHGALSLQDIVRRLELSPGQV-KNSLLIL- 58
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
IQHNCVQA++ P+ GD + T Y+A+ +N+LHRLRF+KFL +VR D+ PE
Sbjct: 59 -----IQHNCVQAYTSPRGAGD----RTVTLYLAIFDNVLHRLRFSKFLSVVRVDI-PES 108
Query: 907 ETLLEGLLQHGRLTFDQLVHRA----SSKQPEAMRDNLRTSFNLLVHAQYVERCPKSDPF 740
E LLEGLLQ+GRLTF+QLV R S P R+ +R +FN LV+A YVERCPK +PF
Sbjct: 109 EVLLEGLLQNGRLTFEQLVERTIFKVSEDSPLPTREEVRMNFNKLVYAHYVERCPKPEPF 168
Query: 739 ITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKE 560
P +V++ TS + R K + S EQ+ + A LSDAERF I +D
Sbjct: 169 FDPLAVEQPTSTRKRAPKTVEAVLSLEQKVVCTAALSDAERFSEI-----PYFMDGSSSA 223
Query: 559 TEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFS 380
+ + +V AG+KRKH +EVD D + I E+E+LWR NFE+F+ CLKKK C E +++
Sbjct: 224 KDGHHAV-AGNKRKHETLEVDED-DSIIAESEVLWRINFERFIFCLKKKFCAERKKAKMR 281
Query: 379 IDAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCR 200
+ + EA E+N N D +VT+ +D IL V K GG+ MTL+H+ +L + C
Sbjct: 282 LGTLAIWEAFFEANVTN--NDNKTVTSPIDGILERVGQKEGGMSMTLDHITSVLNDLEC- 338
Query: 199 LCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
T + +T DL +ETC+N+E+ESLV K++G+EAY IFRLL+K G ETD+
Sbjct: 339 TSTANNPEEFTFDLNKLVETCRNDEIESLVKKKHGQEAYTIFRLLLKQGSPVETDE 394
>ref|NP_001043863.1| Os01g0679000 [Oryza sativa Japonica Group]
gi|56202140|dbj|BAD73473.1| RNA polymerase III
subunit-like protein [Oryza sativa Japonica Group]
gi|113533394|dbj|BAF05777.1| Os01g0679000 [Oryza sativa
Japonica Group] gi|215765022|dbj|BAG86719.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|937897702|dbj|BAS73682.1| Os01g0679000 [Oryza sativa
Japonica Group]
Length = 506
Score = 331 bits (849), Expect = 8e-88
Identities = 186/416 (44%), Positives = 261/416 (62%), Gaps = 4/416 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV++HGI LAV +I HFG LVS+VC CLL G L QE++R +EL P +NS
Sbjct: 1 MVSQHGILLAVAIISDHFGPLVSKVCRCLLRHGALPLQEIVRRLELSPGQV-KNSLLVL- 58
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
IQHNCVQAF+ P+ GD K T+Y+A+ +NI+HR RF+KFL I+R+D+ PE
Sbjct: 59 -----IQHNCVQAFNAPRGNGD----KTVTHYLAIFDNIVHRQRFSKFLSIIRADI-PES 108
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPEAM----RDNLRTSFNLLVHAQYVERCPKSDPF 740
E LLEGLLQ+GRLTF QLV R SK PE R+ +R +FN LV A YVERCPK +PF
Sbjct: 109 EALLEGLLQNGRLTFGQLVERTISKVPEGSITPAREEIRMNFNKLVFAHYVERCPKPEPF 168
Query: 739 ITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKE 560
P +++TS + R K S +++ + A LSDAERF I I+++
Sbjct: 169 FDPLVDEQSTSSRKRAPKTVEIALSIDKKVVNTAALSDAERFSEIPY-----IMEDASNA 223
Query: 559 TEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFS 380
+ S +G KRKH +E D+++ +TI ENE+LWRANFEKF CLKKK C + + +
Sbjct: 224 NDSPRSSISGAKRKHNALEGDAELDSTIAENEVLWRANFEKFTFCLKKKFCADRKKPKLK 283
Query: 379 IDAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCR 200
+ + EA E++ + D NSVT+ ++ I+ + K GG MTL+H+ +LE++ C
Sbjct: 284 VGTHPIWEAFFEASLMER--DNNSVTSPINGIMERLGQKEGGTSMTLDHITRVLEELNCS 341
Query: 199 LCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
+E+ + + +DL +E +NEE+ESLV K+YG+EA+ IFRLLV++ G ETD+
Sbjct: 342 PSSEDPDS-FILDLSRIVEASRNEEIESLVRKKYGQEAFTIFRLLVRERGPVETDK 396
>tpg|DAA58620.1| TPA: hypothetical protein ZEAMMB73_769576 [Zea mays]
Length = 507
Score = 331 bits (849), Expect = 8e-88
Identities = 187/416 (44%), Positives = 258/416 (62%), Gaps = 4/416 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV++HGI LAV +I HFG +VS+VC CLL G LS Q+++R +EL P +NS
Sbjct: 1 MVSQHGILLAVNIISDHFGPIVSKVCGCLLRHGALSLQDIVRRLELSPGQV-KNSLLIL- 58
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
IQHNCVQA++ P+ GD + T Y+A+ +N+LHRLRF+KFL +VR D+
Sbjct: 59 -----IQHNCVQAYTSPRGAGD----RTVTLYLAIFDNVLHRLRFSKFLSVVRVDIPEVS 109
Query: 907 ETLLEGLLQHGRLTFDQLVHR----ASSKQPEAMRDNLRTSFNLLVHAQYVERCPKSDPF 740
E LLEGLLQ+GRLTF+QLV R S P R+ +R +FN LV+A YVERCPK +PF
Sbjct: 110 EVLLEGLLQNGRLTFEQLVERTIFKVSEDSPLPTREEVRMNFNKLVYAHYVERCPKPEPF 169
Query: 739 ITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKE 560
P +V++ TS + R K + S EQ+ + A LSDAERF I +D
Sbjct: 170 FDPLAVEQPTSTRKRAPKTVEAVLSLEQKVVCTAALSDAERFSEI-----PYFMDGSSSA 224
Query: 559 TEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFS 380
+ + +V AG+KRKH +EVD D + I E+E+LWR NFE+F+ CLKKK C E +++
Sbjct: 225 KDGHHAV-AGNKRKHETLEVDED-DSIIAESEVLWRINFERFIFCLKKKFCAERKKAKMR 282
Query: 379 IDAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCR 200
+ + EA E+N N D +VT+ +D IL V K GG+ MTL+H+ +L + C
Sbjct: 283 LGTLAIWEAFFEANVTN--NDNKTVTSPIDGILERVGQKEGGMSMTLDHITSVLNDLEC- 339
Query: 199 LCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
T + +T DL +ETC+N+E+ESLV K++G+EAY IFRLL+K G ETD+
Sbjct: 340 TSTANNPEEFTFDLNKLVETCRNDEIESLVKKKHGQEAYTIFRLLLKQGSPVETDE 395
>emb|CBH32599.1| RNA polymerase III subunit RPC82 domain containing protein, expressed
[Triticum aestivum] gi|669029654|emb|CDM83933.1| unnamed
protein product [Triticum aestivum]
Length = 502
Score = 329 bits (844), Expect = 3e-87
Identities = 185/416 (44%), Positives = 260/416 (62%), Gaps = 4/416 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV++HGI LA LI HFG LV++VC+CLL G L E++R ++L P +NS
Sbjct: 1 MVSQHGILLAAGLISDHFGPLVAKVCDCLLRHGALQLTEIVRRLKL-PQGQVKNSLLVL- 58
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
IQHNCVQAFS P+ GD + T Y+A+ +N+LHRLRF+KF+ I+R+D+ PE
Sbjct: 59 -----IQHNCVQAFSSPR--GD----RTITLYLAIFDNVLHRLRFSKFISIIRADI-PES 106
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPEAM----RDNLRTSFNLLVHAQYVERCPKSDPF 740
E L+EGLLQ+GRLTFDQLV R SK PE R+ +R +FN LV+A+YVERCPK++P+
Sbjct: 107 EALIEGLLQNGRLTFDQLVGRTISKVPEGTIRPAREEIRMNFNRLVYARYVERCPKAEPY 166
Query: 739 ITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKE 560
P +++T + R K S EQ+ + A LSD ERF I + +++ K
Sbjct: 167 FNPQEDEQSTGARRRVPKTAEEVLSLEQKVVNTATLSDPERFSEIPYS-----MEDASKT 221
Query: 559 TEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFS 380
+ + AG KRKH EVD ++++TI ENE+LWR NFEKF+ CLKKK C + + +
Sbjct: 222 NDCPHNAVAGAKRKHGAFEVDEELNSTIAENEVLWRVNFEKFIFCLKKKFCADRKKPKLK 281
Query: 379 IDAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCR 200
+ + E+ E+N +K D NSVT+S++ IL + K GG M++ ++ +L +
Sbjct: 282 VGTHPIWESFFEANLPDK--DTNSVTSSINGILEKLGQKEGGAAMSIGDIKPVLLDL--- 336
Query: 199 LCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
CT G +T DL+ +E C+NEE+ESLV K+YG+EA+ IFRLLV G ETDQ
Sbjct: 337 QCTTSDGEEFTFDLRKMVEACRNEEIESLVKKKYGQEAFTIFRLLVTQGCAVETDQ 392
>ref|XP_002456140.1| hypothetical protein SORBIDRAFT_03g031160 [Sorghum bicolor]
gi|241928115|gb|EES01260.1| hypothetical protein
SORBIDRAFT_03g031160 [Sorghum bicolor]
Length = 506
Score = 328 bits (842), Expect = 5e-87
Identities = 191/416 (45%), Positives = 259/416 (62%), Gaps = 4/416 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV++HGI LAV +I HFG +VS+VC CLL G LS E+ R +EL PA +NS
Sbjct: 1 MVSQHGILLAVNIISDHFGPIVSKVCGCLLRHGALSLLEIGRRLELSPAQV-KNSLLIL- 58
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
IQHNCVQA++ P+ GGD K T Y+A+ +N+LHRLRF+KFL +VR D+ PE
Sbjct: 59 -----IQHNCVQAYTSPRGGGD----KTVTLYLAIFDNVLHRLRFSKFLSVVRVDI-PES 108
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPEAM----RDNLRTSFNLLVHAQYVERCPKSDPF 740
E LLEGLLQ+GRLTF+QLV R K PE R+ +R +FN LV+A YVERCPKS+PF
Sbjct: 109 EVLLEGLLQNGRLTFEQLVERTIFKVPEGSPLPTREEIRMNFNKLVYAHYVERCPKSEPF 168
Query: 739 ITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKE 560
P +V++ TS + R K + S EQ+ + A LSDAERF I ++
Sbjct: 169 FDPLAVEQPTSTRKRAPKIVEAVLSLEQKVVSTAALSDAERFSQI-----PYFMEGSSSA 223
Query: 559 TEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFS 380
+ + +V AG+KRKH +EVD + + I E+E LWR NFE+F+ CLKKK C E +++
Sbjct: 224 NDGHHAV-AGNKRKHEALEVDEE-DSIIAESEFLWRINFERFIFCLKKKFCAERKKAKMR 281
Query: 379 IDAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCR 200
+ + EA E+N N D +VT+ +D IL V K GG MTL+ + +L + C
Sbjct: 282 LGTLAIWEAFFEANVTN--NDNKTVTSPIDGILERVGQKEGGTSMTLDQIISVLNDLEC- 338
Query: 199 LCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
T + +T DL +ETC+N+E+ESLV K++G+EAY IFRLL+K G ETD+
Sbjct: 339 TSTTNNPEEFTFDLNKLVETCRNDEIESLVKKKHGQEAYTIFRLLLKQGCPVETDE 394
>ref|XP_006652166.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC3-like [Oryza brachyantha]
Length = 510
Score = 311 bits (798), Expect = 6e-82
Identities = 181/416 (43%), Positives = 259/416 (62%), Gaps = 4/416 (0%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV++HGI LAV +I HFG L +VC CLL G L QE++R +EL P +NS
Sbjct: 1 MVSQHGIFLAVGIISDHFGPL--KVCRCLLRHGALPLQEIVRRLELSPGQV-KNSLLVL- 56
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPEC 908
IQHNCVQ+F+ P+ GD K T+Y+A+ ENILHR RFAKF+ ++R+D+ PE
Sbjct: 57 -----IQHNCVQSFNSPRGSGD----KTTTHYLAIFENILHRQRFAKFVSVIRADM-PES 106
Query: 907 ETLLEGLLQHGRLTFDQLVHRASSKQPEA----MRDNLRTSFNLLVHAQYVERCPKSDPF 740
E LL+GLLQ+GRLTFDQLV R S PE R+ +R +FN L+ YVE CPK +PF
Sbjct: 107 EALLQGLLQNGRLTFDQLVERTISVVPEGDIKPAREEIRMNFNKLIFEHYVEPCPKPEPF 166
Query: 739 ITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKE 560
P ++ TS + R K S +++ + A LSDAER+ I I+++
Sbjct: 167 FNPLVDEQPTSTRKRAPKTVEISLSIDKKVVNTAALSDAERYSEIP-----CIMEDASNA 221
Query: 559 TEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSRFS 380
+ S +G KRK IEVD+++++TI +NE+L+RANFEKF+ CLKKK C E + +
Sbjct: 222 NDSPHSSISGAKRKRNAIEVDAELNSTIAQNEVLYRANFEKFMFCLKKKFCAERKKPKLK 281
Query: 379 IDAGIVLEAMIESNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCR 200
+ + EA E++ + D NSVT+ ++ IL + G+ GG MTL+H+ +LE++ C
Sbjct: 282 VGTHPIREAFFEASLIER--DNNSVTSPINGILERL-GQKGGTSMTLDHITRVLEELNCS 338
Query: 199 LCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
+E+ + + +DL IE +NEE+ESLV K+YG+EA+ IFRLLV++G ETD+
Sbjct: 339 PSSEDPNS-FMLDLSRIIEASRNEEIESLVKKKYGQEAFIIFRLLVREGCPVETDK 393
>ref|XP_009627999.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X3
[Nicotiana tomentosiformis]
Length = 535
Score = 311 bits (797), Expect = 8e-82
Identities = 184/420 (43%), Positives = 261/420 (62%), Gaps = 8/420 (1%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV+ HGI LAV+LI S+FGDL ++VCECLL RGT S +++R EL +N RN
Sbjct: 1 MVSPHGIKLAVYLISSYFGDLNAKVCECLLQRGTQSLAQIVRFTELS-RENVRNCLLVL- 58
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGP-- 914
I HNCVQAF+V + G G A K TNY+AL +NI+H+LRF KFL IV LG
Sbjct: 59 -----IHHNCVQAFAVQQEGAFGEAPKVITNYMALFDNIIHKLRFPKFLEIVSEVLGEKV 113
Query: 913 --ECETLLEGLLQHGRLTFDQLVHR--ASSKQPEAMRDNLRTSFNLLVHAQYVERCPKSD 746
ECE + EGLLQHGRL+ +Q++ R +S Q ++ + R +FN LV+A++VERCP +
Sbjct: 114 GKECEEIFEGLLQHGRLSLNQIIDRFKQTSNQGDSSAEAARDNFNKLVNARFVERCPAPE 173
Query: 745 PFITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKE 566
PF+ P++ +ET + K A + + EQ+A+ AA ++ RF ++T ++ +
Sbjct: 174 PFLGPSAEEETAAKKQGAKSAKIVKQTIEQRALAAAAPMESMRFLVETDTWNEASVETTD 233
Query: 565 KETEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVENIRSR 386
K+T + V+ G KRK +E ++++ AT EN++LWRANFE+F+ L+ KACV N++ R
Sbjct: 234 KKT---TVVTLGTKRKQDNLESNTELLAT-DENKVLWRANFEEFIRRLRHKACVANVKVR 289
Query: 385 FSIDAGIVLEAMIE--SNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRIILEQ 212
+ DA IVL A +E + K NSV S++AI V + GG+ M LE +R L +
Sbjct: 290 VNNDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRASLVE 349
Query: 211 IGCRLCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
+GC Y++DLK IE + EEVES+VLKRYG+EAYR+FRLL K ETD+
Sbjct: 350 LGCETPLMAIDETYSVDLKNVIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLLETDK 409
>ref|XP_009627995.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X2
[Nicotiana tomentosiformis]
Length = 539
Score = 310 bits (795), Expect = 1e-81
Identities = 183/424 (43%), Positives = 262/424 (61%), Gaps = 12/424 (2%)
Frame = -3
Query: 1267 MVARHGIHLAVFLIKSHFGDLVSRVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXX 1088
MV+ HGI LAV+LI S+FGDL ++VCECLL RGT S +++R EL +N RN
Sbjct: 1 MVSPHGIKLAVYLISSYFGDLNAKVCECLLQRGTQSLAQIVRFTELS-RENVRNCLLVL- 58
Query: 1087 XXXXLIQHNCVQAFSVPKFGGDGGAIKPQTNYIALLENILHRLRFAKFLGIVRS------ 926
I HNCVQAF+V + G G A K TNY+AL +NI+H+LRF KFL IV
Sbjct: 59 -----IHHNCVQAFAVQQEGAFGEAPKVITNYMALFDNIIHKLRFPKFLEIVSEVLGEKV 113
Query: 925 --DLGPECETLLEGLLQHGRLTFDQLVHR--ASSKQPEAMRDNLRTSFNLLVHAQYVERC 758
++G ECE + EGLLQHGRL+ +Q++ R +S Q ++ + R +FN LV+A++VERC
Sbjct: 114 GKEVGKECEEIFEGLLQHGRLSLNQIIDRFKQTSNQGDSSAEAARDNFNKLVNARFVERC 173
Query: 757 PKSDPFITPNSVDETTSGKGRGSKAGVSPPSTEQQAMLAAVLSDAERFCGISNTGMATII 578
P +PF+ P++ +ET + K A + + EQ+A+ AA ++ RF ++T +
Sbjct: 174 PAPEPFLGPSAEEETAAKKQGAKSAKIVKQTIEQRALAAAAPMESMRFLVETDTWNEASV 233
Query: 577 DNKEKETEHYSSVSAGDKRKHVEIEVDSDVHATITENEILWRANFEKFVHCLKKKACVEN 398
+ +K+T + V+ G KRK +E ++++ AT EN++LWRANFE+F+ L+ KACV N
Sbjct: 234 ETTDKKT---TVVTLGTKRKQDNLESNTELLAT-DENKVLWRANFEEFIRRLRHKACVAN 289
Query: 397 IRSRFSIDAGIVLEAMIE--SNCNNKATDVNSVTASMDAILGGVRGKPGGIQMTLEHVRI 224
++ R + DA IVL A +E + K NSV S++AI V + GG+ M LE +R
Sbjct: 290 VKVRVNNDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRA 349
Query: 223 ILEQIGCRLCTEESGALYTIDLKGTIETCQNEEVESLVLKRYGKEAYRIFRLLVKDGGKK 44
L ++GC Y++DLK IE + EEVES+VLKRYG+EAYR+FRLL K
Sbjct: 350 SLVELGCETPLMAIDETYSVDLKNVIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLL 409
Query: 43 ETDQ 32
ETD+
Sbjct: 410 ETDK 413
>dbj|BAJ96220.1| predicted protein, partial [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 310 bits (795), Expect = 1e-81
Identities = 173/393 (44%), Positives = 241/393 (61%), Gaps = 4/393 (1%)
Frame = -3
Query: 1198 RVCECLLNRGTLSFQELLRSIELGPADNGRNSXXXXXXXXXLIQHNCVQAFSVPKFGGDG 1019
+VC+CLL +G L QE++R + L P +NS IQHNCVQAFS P GD
Sbjct: 10 KVCDCLLRQGALQLQEIVRRLNLPPGQV-KNSLLVL------IQHNCVQAFSSPSPRGD- 61
Query: 1018 GAIKPQTNYIALLENILHRLRFAKFLGIVRSDLGPECETLLEGLLQHGRLTFDQLVHRAS 839
+ T Y+ + N+LHRLRF+KF+ ++R+D+ PE E L+EGLLQ+GRLTFDQLV R
Sbjct: 62 ---RTMTLYLTIFNNVLHRLRFSKFISVIRADI-PESEALIEGLLQNGRLTFDQLVGRTI 117
Query: 838 SKQPEAM----RDNLRTSFNLLVHAQYVERCPKSDPFITPNSVDETTSGKGRGSKAGVSP 671
SK PE R+ +R +FN LV A+YVERCPK++P P +++T+ + R K
Sbjct: 118 SKVPEGTIRPAREEIRMNFNRLVSARYVERCPKAEPHFNPQEDEQSTTARKRAPKTAEEV 177
Query: 670 PSTEQQAMLAAVLSDAERFCGISNTGMATIIDNKEKETEHYSSVSAGDKRKHVEIEVDSD 491
S EQ+ + A LSD ERF I + +++ K + +V AG KRKH EVD +
Sbjct: 178 LSLEQKVVNTATLSDPERFSEIPYS-----MEDASKTNDRPHNVVAGAKRKHGAFEVDEE 232
Query: 490 VHATITENEILWRANFEKFVHCLKKKACVENIRSRFSIDAGIVLEAMIESNCNNKATDVN 311
+++TI ENE+LWR NFEKF+ CLKKK C + + + + + E+ E+N +K D N
Sbjct: 233 LNSTIAENEVLWRVNFEKFIFCLKKKFCADRKKPKLKVGTHPIWESFFEANLTDK--DTN 290
Query: 310 SVTASMDAILGGVRGKPGGIQMTLEHVRIILEQIGCRLCTEESGALYTIDLKGTIETCQN 131
SVT+S+ IL + K GG M++ ++ +LE + CT +G +T DL IE C+N
Sbjct: 291 SVTSSIGGILEKLGQKEGGAAMSIGQIQPVLEDL---QCTTSTGEEFTFDLHKMIEACRN 347
Query: 130 EEVESLVLKRYGKEAYRIFRLLVKDGGKKETDQ 32
EE+ESLV K+YG+EA+ IFRLLV G ETDQ
Sbjct: 348 EEIESLVKKKYGQEAFTIFRLLVTQGCAVETDQ 380