BLASTX nr result
ID: Ophiopogon21_contig00016844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00016844
(560 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012076986.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 145 2e-32
ref|XP_009392936.1| PREDICTED: cleavage and polyadenylation spec... 145 2e-32
gb|KDP33872.1| hypothetical protein JCGZ_07443 [Jatropha curcas] 145 2e-32
ref|XP_008808235.1| PREDICTED: cleavage and polyadenylation spec... 144 4e-32
ref|XP_010696555.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 142 1e-31
emb|CDP03125.1| unnamed protein product [Coffea canephora] 142 1e-31
ref|XP_010656158.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 140 4e-31
ref|XP_002279095.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 140 4e-31
ref|XP_007012734.1| CFIM-25 isoform 1 [Theobroma cacao] gi|50878... 140 4e-31
emb|CBI27869.3| unnamed protein product [Vitis vinifera] 140 4e-31
ref|XP_010049443.1| PREDICTED: cleavage and polyadenylation spec... 140 5e-31
gb|KCW82030.1| hypothetical protein EUGRSUZ_C03406 [Eucalyptus g... 140 5e-31
ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citr... 140 5e-31
ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Popu... 139 9e-31
ref|XP_009620399.1| PREDICTED: cleavage and polyadenylation spec... 139 1e-30
ref|XP_011003360.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 138 2e-30
ref|XP_010925042.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 138 2e-30
ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arab... 137 3e-30
ref|XP_002445458.1| hypothetical protein SORBIDRAFT_07g019840 [S... 137 5e-30
ref|XP_004513457.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 136 8e-30
>ref|XP_012076986.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Jatropha
curcas]
Length = 212
Score = 145 bits (365), Expect = 2e-32
Identities = 64/87 (73%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
V +C+GMWWK DFETLPYPYMP + KECTKLFLVRLPM+++F+VP+N+KLLA+PLCQ
Sbjct: 124 VDECLGMWWKPDFETLPYPYMPPNVKTPKECTKLFLVRLPMSRKFIVPKNLKLLAIPLCQ 183
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+H+N+KTYG IISGIPQLLSK+SF+II
Sbjct: 184 IHENHKTYGSIISGIPQLLSKFSFNII 210
>ref|XP_009392936.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Musa acuminata subsp. malaccensis]
Length = 215
Score = 145 bits (365), Expect = 2e-32
Identities = 66/87 (75%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
+ + IGMWW+SDFETL +PY+P RR KECTKLFLV+LPMT+ F+VPRN+KLLAVPLCQ
Sbjct: 127 IDELIGMWWRSDFETLRFPYLPPNLRRPKECTKLFLVKLPMTRHFIVPRNLKLLAVPLCQ 186
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
LHDN++TYGPIISGIPQLLSK+SF+II
Sbjct: 187 LHDNSETYGPIISGIPQLLSKFSFNII 213
>gb|KDP33872.1| hypothetical protein JCGZ_07443 [Jatropha curcas]
Length = 208
Score = 145 bits (365), Expect = 2e-32
Identities = 64/87 (73%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
V +C+GMWWK DFETLPYPYMP + KECTKLFLVRLPM+++F+VP+N+KLLA+PLCQ
Sbjct: 120 VDECLGMWWKPDFETLPYPYMPPNVKTPKECTKLFLVRLPMSRKFIVPKNLKLLAIPLCQ 179
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+H+N+KTYG IISGIPQLLSK+SF+II
Sbjct: 180 IHENHKTYGSIISGIPQLLSKFSFNII 206
>ref|XP_008808235.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Phoenix dactylifera]
Length = 209
Score = 144 bits (362), Expect = 4e-32
Identities = 65/87 (74%), Positives = 78/87 (89%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
V +CIG+WW+S+FETLP+PY+P RR KECTKLFLVRLP T+QFVVP+N+KLLAVPLCQ
Sbjct: 121 VDECIGIWWRSEFETLPFPYLPPNTRRPKECTKLFLVRLPRTRQFVVPKNLKLLAVPLCQ 180
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+HDN+KTYGPIISGIP LSK+SF+ I
Sbjct: 181 IHDNSKTYGPIISGIPHHLSKFSFNTI 207
>ref|XP_010696555.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Beta
vulgaris subsp. vulgaris] gi|870843729|gb|KMS96863.1|
hypothetical protein BVRB_8g199390 [Beta vulgaris subsp.
vulgaris]
Length = 229
Score = 142 bits (358), Expect = 1e-31
Identities = 61/87 (70%), Positives = 80/87 (91%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VGDC+GMWW+ DFETL YPY+P ++ KEC KLFLV+LP++++F+VP+N+KLLAVPLCQ
Sbjct: 141 VGDCLGMWWRPDFETLFYPYLPPNIKKPKECAKLFLVKLPVSRRFIVPKNLKLLAVPLCQ 200
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+HDN+KTYGPII+GIPQLLSKYSF+++
Sbjct: 201 VHDNHKTYGPIIAGIPQLLSKYSFNML 227
>emb|CDP03125.1| unnamed protein product [Coffea canephora]
Length = 218
Score = 142 bits (358), Expect = 1e-31
Identities = 63/87 (72%), Positives = 78/87 (89%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VG+C+GMWW+ DF+ L YPY+P +R KECTKLFLV+LP +Q+F VPRN+KLLAVPLCQ
Sbjct: 130 VGECLGMWWRPDFDALLYPYLPPNIKRPKECTKLFLVKLPESQKFTVPRNLKLLAVPLCQ 189
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
LH+N+KTYGPIISG+PQLLSK+SF+II
Sbjct: 190 LHENHKTYGPIISGVPQLLSKFSFNII 216
>ref|XP_010656158.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X1
[Vitis vinifera]
Length = 302
Score = 140 bits (353), Expect = 4e-31
Identities = 60/87 (68%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VG+C+GMWW+ DFETL YPY+P + KECTKLFLV+LP +++F+VP+N+KLLA+PLCQ
Sbjct: 214 VGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQ 273
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
LH+N+KTYGPII+G+PQLLSK+SF+II
Sbjct: 274 LHENDKTYGPIIAGVPQLLSKFSFNII 300
>ref|XP_002279095.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Vitis vinifera]
Length = 284
Score = 140 bits (353), Expect = 4e-31
Identities = 60/87 (68%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VG+C+GMWW+ DFETL YPY+P + KECTKLFLV+LP +++F+VP+N+KLLA+PLCQ
Sbjct: 196 VGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQ 255
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
LH+N+KTYGPII+G+PQLLSK+SF+II
Sbjct: 256 LHENDKTYGPIIAGVPQLLSKFSFNII 282
>ref|XP_007012734.1| CFIM-25 isoform 1 [Theobroma cacao] gi|508783097|gb|EOY30353.1|
CFIM-25 isoform 1 [Theobroma cacao]
Length = 219
Score = 140 bits (353), Expect = 4e-31
Identities = 61/87 (70%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VG+C+GMWW+ DFETL YPY+P ++ KECTKLFLVRLP +++F+VP+N+KLLAVPLCQ
Sbjct: 131 VGECLGMWWRHDFETLLYPYLPPNVKKPKECTKLFLVRLPESRKFIVPKNLKLLAVPLCQ 190
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+H+N+KTYGPIISG+PQLLSK+S +II
Sbjct: 191 VHENHKTYGPIISGVPQLLSKFSINII 217
>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 140 bits (353), Expect = 4e-31
Identities = 60/87 (68%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VG+C+GMWW+ DFETL YPY+P + KECTKLFLV+LP +++F+VP+N+KLLA+PLCQ
Sbjct: 203 VGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQ 262
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
LH+N+KTYGPII+G+PQLLSK+SF+II
Sbjct: 263 LHENDKTYGPIIAGVPQLLSKFSFNII 289
>ref|XP_010049443.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Eucalyptus grandis]
Length = 222
Score = 140 bits (352), Expect = 5e-31
Identities = 59/87 (67%), Positives = 80/87 (91%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
+G+C+GMWW+ DFETL YPY+P ++ KECTKLFLV+LP++++F+VP+N+KLLAVPLCQ
Sbjct: 134 IGECLGMWWRPDFETLLYPYLPPNIKKPKECTKLFLVKLPVSRKFIVPKNLKLLAVPLCQ 193
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+H+N KTYGPII+G+PQLLSK+SF+II
Sbjct: 194 IHENLKTYGPIIAGVPQLLSKFSFNII 220
>gb|KCW82030.1| hypothetical protein EUGRSUZ_C03406 [Eucalyptus grandis]
Length = 318
Score = 140 bits (352), Expect = 5e-31
Identities = 59/87 (67%), Positives = 80/87 (91%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
+G+C+GMWW+ DFETL YPY+P ++ KECTKLFLV+LP++++F+VP+N+KLLAVPLCQ
Sbjct: 230 IGECLGMWWRPDFETLLYPYLPPNIKKPKECTKLFLVKLPVSRKFIVPKNLKLLAVPLCQ 289
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+H+N KTYGPII+G+PQLLSK+SF+II
Sbjct: 290 IHENLKTYGPIIAGVPQLLSKFSFNII 316
>ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
gi|568843220|ref|XP_006475514.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X1 [Citrus sinensis] gi|557554771|gb|ESR64785.1|
hypothetical protein CICLE_v10009459mg [Citrus
clementina] gi|641836450|gb|KDO55414.1| hypothetical
protein CISIN_1g028063mg [Citrus sinensis]
Length = 214
Score = 140 bits (352), Expect = 5e-31
Identities = 62/87 (71%), Positives = 78/87 (89%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VG+C+GMWWK DFETL +PY P +R KECTKLFLV+LP++Q+F VP+N+KLLAVPLCQ
Sbjct: 126 VGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQ 185
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+H+N+KTYG IISG+PQLLSK+SF+II
Sbjct: 186 IHENHKTYGQIISGVPQLLSKFSFNII 212
>ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Populus trichocarpa]
gi|550336365|gb|EEE91798.2| hypothetical protein
POPTR_0006s14840g [Populus trichocarpa]
Length = 258
Score = 139 bits (350), Expect = 9e-31
Identities = 59/86 (68%), Positives = 79/86 (91%), Gaps = 3/86 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VGDC+GMWW+SDFETL YPY+P + KECTKL++V+LP +++F+VP+N+KLLAVPLCQ
Sbjct: 171 VGDCLGMWWRSDFETLLYPYLPPNLKVPKECTKLYVVKLPASRKFIVPKNLKLLAVPLCQ 230
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSI 310
+H+N+KTYGP+ISG+PQLLSK+SF+I
Sbjct: 231 VHENHKTYGPVISGVPQLLSKFSFNI 256
>ref|XP_009620399.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Nicotiana tomentosiformis]
Length = 126
Score = 139 bits (349), Expect = 1e-30
Identities = 60/87 (68%), Positives = 80/87 (91%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VG+C+GMWW+ DFETL YP+MP +RSKECTKLFLVRLP +++F+VP+N+KLLAVPLCQ
Sbjct: 37 VGECLGMWWRPDFETLFYPFMPPDTKRSKECTKLFLVRLPESRKFIVPKNLKLLAVPLCQ 96
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+H+N KTYGPII+G+PQLLSK+S++++
Sbjct: 97 VHENFKTYGPIIAGVPQLLSKFSYNMM 123
>ref|XP_011003360.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X1
[Populus euphratica]
Length = 210
Score = 138 bits (348), Expect = 2e-30
Identities = 60/86 (69%), Positives = 78/86 (90%), Gaps = 3/86 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VGDC+GMWW+SDFETL YPY+P + KECTKL+LV+LP +++F+VP+N+KLLAVPLCQ
Sbjct: 123 VGDCLGMWWRSDFETLLYPYLPPNLKVPKECTKLYLVKLPASRKFIVPKNLKLLAVPLCQ 182
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSI 310
+H+N+KTYGPIISG+PQLLSK+S +I
Sbjct: 183 VHENHKTYGPIISGVPQLLSKFSLNI 208
>ref|XP_010925042.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Elaeis
guineensis]
Length = 211
Score = 138 bits (348), Expect = 2e-30
Identities = 62/87 (71%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
V +CIG+WW+S+FETLP+PY+P R KEC KLFLVRLP +QFVVP+N+KLLAVPLCQ
Sbjct: 123 VDECIGIWWRSEFETLPFPYLPPNTHRPKECAKLFLVRLPRNRQFVVPKNLKLLAVPLCQ 182
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+HDN+KTYGPIISGIP LLSK+ F+ I
Sbjct: 183 IHDNSKTYGPIISGIPHLLSKFYFNTI 209
>ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata] gi|297313222|gb|EFH43645.1| hypothetical protein
ARALYDRAFT_491776 [Arabidopsis lyrata subsp. lyrata]
Length = 223
Score = 137 bits (345), Expect = 3e-30
Identities = 62/87 (71%), Positives = 76/87 (87%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VG+CIGMWW+ +FETL YP++P + KECTKLFLVRLP+ QQFVVP+N KLLAVPLCQ
Sbjct: 135 VGECIGMWWRPNFETLMYPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQ 194
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
LH+N KTYGPIIS IP+LLSK+SF+++
Sbjct: 195 LHENEKTYGPIISQIPKLLSKFSFNMM 221
>ref|XP_002445458.1| hypothetical protein SORBIDRAFT_07g019840 [Sorghum bicolor]
gi|241941808|gb|EES14953.1| hypothetical protein
SORBIDRAFT_07g019840 [Sorghum bicolor]
Length = 233
Score = 137 bits (344), Expect = 5e-30
Identities = 61/87 (70%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
+G+CIGMWW+S+FE +P+PYMP R KEC KLFLVRLPM++QF+VPRNMKLLAVPL Q
Sbjct: 145 IGECIGMWWRSEFEAIPFPYMPPSFRAPKECIKLFLVRLPMSRQFIVPRNMKLLAVPLSQ 204
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+H N + YGPIISGIP LLSK+SF++I
Sbjct: 205 VHGNAQVYGPIISGIPNLLSKFSFNVI 231
>ref|XP_004513457.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Cicer arietinum]
Length = 202
Score = 136 bits (342), Expect = 8e-30
Identities = 60/87 (68%), Positives = 77/87 (88%), Gaps = 3/87 (3%)
Frame = -3
Query: 558 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 388
VG+C+GMWW+ DFETL YP++P + KECTKLFLV+LP +++F VPRNMKLL+VPLCQ
Sbjct: 114 VGECLGMWWRPDFETLMYPFLPPNVKHPKECTKLFLVKLPESRRFTVPRNMKLLSVPLCQ 173
Query: 387 LHDNNKTYGPIISGIPQLLSKYSFSII 307
+H+N+KTYGPIIS IPQLLSK+SF++I
Sbjct: 174 IHENHKTYGPIISRIPQLLSKFSFNMI 200