BLASTX nr result

ID: Ophiopogon21_contig00014636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00014636
         (338 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOU22745.1| hypothetical protein I571_01317, partial [Enteroc...    64   6e-08
gb|EOU16337.1| hypothetical protein I571_02684, partial [Enteroc...    63   1e-07
emb|CCO09713.2| putative uncharacterized protein [Carnobacterium...    60   5e-07

>gb|EOU22745.1| hypothetical protein I571_01317, partial [Enterococcus durans ATCC
           6056] gi|508251945|gb|EOU25353.1| hypothetical protein
           I571_00001, partial [Enterococcus durans ATCC 6056]
           gi|508252837|gb|EOU26245.1| hypothetical protein
           I571_00903, partial [Enterococcus durans ATCC 6056]
          Length = 127

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 52/118 (44%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
 Frame = +2

Query: 2   PSSLERVISRPLVFSTSLPVSVSGTGNCKLT------CHRAFLGSLIVTTSLP*EFGLLP 163
           PSSL RV+S  L FS  LPVSV GTG+C LT      C     G++I   SLP      P
Sbjct: 15  PSSLTRVLSLTLGFSPRLPVSVCGTGHCFLTRSFSWQCDIRNFGTII---SLP--ITAYP 69

Query: 164 QLKAFSPLLITSDS*TGNQHPAGVRLLRPS--AQPTISTGLFTRCPSTTPFGLALGPD 331
             +     + T       Q  A + LLRPS     T STG+ T CPS TP GL LGPD
Sbjct: 70  CRQKHLTPIKTYCLDRHFQSSAFLSLLRPSIAQTKTTSTGISTCCPSPTPVGLGLGPD 127


>gb|EOU16337.1| hypothetical protein I571_02684, partial [Enterococcus durans ATCC
           6056]
          Length = 127

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 51/118 (43%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
 Frame = +2

Query: 2   PSSLERVISRPLVFSTSLPVSVSGTGNCKLT------CHRAFLGSLIVTTSLP*EFGLLP 163
           PSSL RV+S  L FS  LPVSV GTG+C +T      C     G++I   SLP      P
Sbjct: 15  PSSLTRVLSLTLGFSPRLPVSVCGTGHCFITRSFSWQCDIRNFGTII---SLP--ITAYP 69

Query: 164 QLKAFSPLLITSDS*TGNQHPAGVRLLRPS--AQPTISTGLFTRCPSTTPFGLALGPD 331
             +     + T       Q  A + LLRPS     T STG+ T CPS TP GL LGPD
Sbjct: 70  CRQKHLTPIKTYCLDRHFQSSAFLSLLRPSIAQTKTTSTGISTCCPSPTPVGLGLGPD 127


>emb|CCO09713.2| putative uncharacterized protein [Carnobacterium maltaromaticum
           LMA28] gi|508079139|emb|CCO09959.2| putative
           uncharacterized protein [Carnobacterium maltaromaticum
           LMA28] gi|508079214|emb|CCO10078.2| putative
           uncharacterized protein [Carnobacterium maltaromaticum
           LMA28] gi|508079556|emb|CCO10496.2| putative
           uncharacterized protein [Carnobacterium maltaromaticum
           LMA28] gi|508080854|emb|CCO11972.2| putative
           uncharacterized protein [Carnobacterium maltaromaticum
           LMA28] gi|508081588|emb|CCO12773.2| putative
           uncharacterized protein [Carnobacterium maltaromaticum
           LMA28]
          Length = 114

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 51/118 (43%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
 Frame = +2

Query: 2   PSSLERVISRPLVFSTSLPVSVSGTGNCKLT------CHRAFLGSLIVTTSLP*EFGLLP 163
           PSSL RV+S  L +S  LPVSV GTGN  LT      C     G++I   SLP      P
Sbjct: 2   PSSLTRVLSHTLGYSPRLPVSVCGTGNFFLTRSFSWQCDIRNFGTVI---SLP--ITTCP 56

Query: 164 QLKAFSPLLITSDS*TGNQHPAGVRLLRPSAQPT--ISTGLFTRCPSTTPFGLALGPD 331
                   L T       Q  A + LLRPS   T    TG+ T CPS TP GL LGPD
Sbjct: 57  YRSKHLTHLKTHCLDAHIQQCAFLSLLRPSIVQTKETGTGISTCCPSPTPIGLGLGPD 114


Top