BLASTX nr result

ID: Ophiopogon21_contig00013615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00013615
         (860 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567192.1| RNA recognition motif-containing protein [Arabi...   114   2e-29
ref|XP_002875012.1| RNA recognition motif-containing protein [Ar...   113   2e-29
gb|KMZ61823.1| RNA-binding protein [Zostera marina]                   123   2e-29
ref|XP_006396334.1| hypothetical protein EUTSA_v10028602mg [Eutr...   117   2e-29
ref|XP_006287524.1| hypothetical protein CARUB_v10000730mg, part...   114   5e-29
ref|XP_006287525.1| hypothetical protein CARUB_v10000730mg, part...   114   5e-29
ref|XP_006287523.1| hypothetical protein CARUB_v10000730mg [Caps...   114   5e-29
ref|XP_010428144.1| PREDICTED: nucleolin-like isoform X1 [Cameli...   114   1e-28
ref|XP_010428150.1| PREDICTED: nucleolin-like isoform X2 [Cameli...   114   1e-28
ref|XP_007051446.1| RNA-binding family protein isoform 1 [Theobr...   115   2e-28
ref|XP_007051447.1| RNA-binding family protein isoform 2 [Theobr...   115   2e-28
ref|XP_007051448.1| RNA-binding (RRM/RBD/RNP motifs) family prot...   115   2e-28
ref|XP_008784874.1| PREDICTED: heterogeneous nuclear ribonucleop...   132   3e-28
ref|XP_010522898.1| PREDICTED: heterogeneous nuclear ribonucleop...   112   3e-28
ref|XP_013612359.1| PREDICTED: nucleolin-like [Brassica oleracea...   114   5e-28
ref|XP_012490169.1| PREDICTED: heterogeneous nuclear ribonucleop...   112   5e-28
gb|KJB41615.1| hypothetical protein B456_007G112300 [Gossypium r...   112   5e-28
gb|KJB41614.1| hypothetical protein B456_007G112300 [Gossypium r...   112   5e-28
gb|KJB41616.1| hypothetical protein B456_007G112300 [Gossypium r...   112   5e-28
ref|XP_008777550.1| PREDICTED: heterogeneous nuclear ribonucleop...   130   1e-27

>ref|NP_567192.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|79324963|ref|NP_001031566.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|13605916|gb|AAK32943.1|AF367357_1
           AT4g00830/A_TM018A10_14 [Arabidopsis thaliana]
           gi|21360555|gb|AAM47474.1| AT4g00830/A_TM018A10_14
           [Arabidopsis thaliana] gi|110743368|dbj|BAE99571.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332656540|gb|AEE81940.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|332656541|gb|AEE81941.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 495

 Score =  114 bits (286), Expect(2) = 2e-29
 Identities = 54/88 (61%), Positives = 66/88 (75%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFEV+L+KD++  +SKG+AFV F  KD AQKAIEE+H KE KGKT+RCSLS+ K+RLF
Sbjct: 140 GEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLF 199

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PK+             GPGVENIE
Sbjct: 200 IGNIPKNWTEDEFRKVIEDVGPGVENIE 227



 Score = 43.1 bits (100), Expect(2) = 2e-29
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
 Frame = -1

Query: 557 RISDEHRRHESAVDDSYKRTRDEYRDQHPADDD--------SYRRDIGDYGEQEQDHGFE 402
           R+  E   +    D+  +   +EY ++   DDD        +  R++ DYG+ +   G  
Sbjct: 10  RVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKG--GDM 67

Query: 401 DEENDKVAEPDEVFDVSGSLKHEEKPVEPKDVADGEKHAELLSL 270
           ++  +++AE D+      +   +EKP  P D  D EK++ LLSL
Sbjct: 68  EDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSL 111


>ref|XP_002875012.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297320849|gb|EFH51271.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 494

 Score =  113 bits (283), Expect(2) = 2e-29
 Identities = 53/88 (60%), Positives = 66/88 (75%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFEV+L+KD++  +SKG+AFV F  KD AQKAIE++H KE KGKT+RCSLS+ K+RLF
Sbjct: 139 GEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEDLHSKEFKGKTIRCSLSETKNRLF 198

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PK+             GPGVENIE
Sbjct: 199 IGNIPKNWTEDEFRKVIENVGPGVENIE 226



 Score = 44.3 bits (103), Expect(2) = 2e-29
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
 Frame = -1

Query: 557 RISDEHRRHESAVDDSYKRTRDEYRDQHPADDD--------SYRRDIGDYGEQEQDHGFE 402
           R+  E   +    D+  +   +EY ++   D+D        +  RD+ DYG+ +   G +
Sbjct: 10  RVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDEDDDDRGNQNAEERDVEDYGDTK---GGD 66

Query: 401 DEENDKVAEPDEVFDVSGSLKHEEKPVEPKDVADGEKHAELLSL 270
            E  +++AE D+      +   +EKP  P D  + EK++ LLSL
Sbjct: 67  MEAQEEIAEDDDNHIDIETADDDEKPASPIDEEEREKYSHLLSL 110


>gb|KMZ61823.1| RNA-binding protein [Zostera marina]
          Length = 476

 Score =  123 bits (308), Expect(2) = 2e-29
 Identities = 59/88 (67%), Positives = 70/88 (79%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GE+F+VKLVKDK+K+ESKG+AF+TFT  +AAQ AIEE+HDKE KG+TLRCSLSQ KHRLF
Sbjct: 132 GELFQVKLVKDKDKKESKGYAFLTFTKSNAAQLAIEELHDKEYKGRTLRCSLSQSKHRLF 191

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PK+             GPGVENIE
Sbjct: 192 IGNIPKNLTDEDMKKILEENGPGVENIE 219



 Score = 34.7 bits (78), Expect(2) = 2e-29
 Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
 Frame = -1

Query: 491 EYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDKVAEPDEVFDVSGSLKHEEKPV--- 321
           EY      DD     D  D G +  D+  E++E     E  E  + S  LK +  PV   
Sbjct: 29  EYNVDEEDDDKILADDYADEGHENHDYDGEEQE-----EEQENTNASEGLKDDSCPVKMD 83

Query: 320 EPKDVA---DGEKHAELLSL 270
           E  D A   D  KHAELLSL
Sbjct: 84  ENLDEAKNDDDAKHAELLSL 103


>ref|XP_006396334.1| hypothetical protein EUTSA_v10028602mg [Eutrema salsugineum]
           gi|557097351|gb|ESQ37787.1| hypothetical protein
           EUTSA_v10028602mg [Eutrema salsugineum]
          Length = 494

 Score =  117 bits (292), Expect(2) = 2e-29
 Identities = 56/88 (63%), Positives = 66/88 (75%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFEV+L+KD++  ESKG+AFV F  KD AQKAIEE+H KE KGKT+RCSLS+ K+RLF
Sbjct: 141 GEIFEVRLMKDRDSGESKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLF 200

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PKS             GPGVENIE
Sbjct: 201 IGNIPKSWTEDEFRKVIEDVGPGVENIE 228



 Score = 40.4 bits (93), Expect(2) = 2e-29
 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
 Frame = -1

Query: 557 RISDEHRRHESAVDDSYKRTRDEYRDQHPADDD---------SYRRDIGDYGEQEQDHGF 405
           R+  E   +    D+  +   +EY ++   +DD         +   D+ DYG++++  G 
Sbjct: 10  RVDFEEGSYSEMEDEVEEEQVEEYEEEEEEEDDEGDDGGNQIAEEHDVEDYGDRKE--GD 67

Query: 404 EDEENDKVAEPDEVFDVSGSLKHEEKPVEPKDVADGEKHAELLSL 270
            +E  +++ E D+      +   EEK   P D  + EK++ LLSL
Sbjct: 68  REEGQEELGEDDDNHIDIETADDEEKSASPIDEEEREKYSHLLSL 112


>ref|XP_006287524.1| hypothetical protein CARUB_v10000730mg, partial [Capsella rubella]
           gi|482556230|gb|EOA20422.1| hypothetical protein
           CARUB_v10000730mg, partial [Capsella rubella]
          Length = 517

 Score =  114 bits (286), Expect(2) = 5e-29
 Identities = 54/88 (61%), Positives = 66/88 (75%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFEV+L+KD++  +SKG+AFV F  KD AQKAIEE+H KE KGKT+RCSLS+ K+RLF
Sbjct: 164 GEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLF 223

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PK+             GPGVENIE
Sbjct: 224 IGNIPKNWTEDEFRKVIEDVGPGVENIE 251



 Score = 41.6 bits (96), Expect(2) = 5e-29
 Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
 Frame = -1

Query: 557 RISDEHRRHESAVDDSYKRTRDEYRDQHPADDD--------SYRRDIGDYGEQEQDHGFE 402
           R+  E   +    D+  +   +EY ++   D+D        +   ++ DYG+ +   G  
Sbjct: 34  RVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDEDDGNGGNQNAEEHEVEDYGDTKG--GDR 91

Query: 401 DEENDKVAEPDEVFDVSGSLKHEEKPVEPKDVADGEKHAELLSL 270
           ++  +++AE D+      +   +EKPV P D  + EK++ LLSL
Sbjct: 92  EDGQEEIAEDDDNHIDIETADDDEKPVSPIDEEEREKYSHLLSL 135


>ref|XP_006287525.1| hypothetical protein CARUB_v10000730mg, partial [Capsella rubella]
           gi|482556231|gb|EOA20423.1| hypothetical protein
           CARUB_v10000730mg, partial [Capsella rubella]
          Length = 513

 Score =  114 bits (286), Expect(2) = 5e-29
 Identities = 54/88 (61%), Positives = 66/88 (75%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFEV+L+KD++  +SKG+AFV F  KD AQKAIEE+H KE KGKT+RCSLS+ K+RLF
Sbjct: 160 GEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLF 219

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PK+             GPGVENIE
Sbjct: 220 IGNIPKNWTEDEFRKVIEDVGPGVENIE 247



 Score = 41.6 bits (96), Expect(2) = 5e-29
 Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
 Frame = -1

Query: 557 RISDEHRRHESAVDDSYKRTRDEYRDQHPADDD--------SYRRDIGDYGEQEQDHGFE 402
           R+  E   +    D+  +   +EY ++   D+D        +   ++ DYG+ +   G  
Sbjct: 30  RVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDEDDGNGGNQNAEEHEVEDYGDTKG--GDR 87

Query: 401 DEENDKVAEPDEVFDVSGSLKHEEKPVEPKDVADGEKHAELLSL 270
           ++  +++AE D+      +   +EKPV P D  + EK++ LLSL
Sbjct: 88  EDGQEEIAEDDDNHIDIETADDDEKPVSPIDEEEREKYSHLLSL 131


>ref|XP_006287523.1| hypothetical protein CARUB_v10000730mg [Capsella rubella]
           gi|482556229|gb|EOA20421.1| hypothetical protein
           CARUB_v10000730mg [Capsella rubella]
          Length = 493

 Score =  114 bits (286), Expect(2) = 5e-29
 Identities = 54/88 (61%), Positives = 66/88 (75%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFEV+L+KD++  +SKG+AFV F  KD AQKAIEE+H KE KGKT+RCSLS+ K+RLF
Sbjct: 140 GEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLF 199

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PK+             GPGVENIE
Sbjct: 200 IGNIPKNWTEDEFRKVIEDVGPGVENIE 227



 Score = 41.6 bits (96), Expect(2) = 5e-29
 Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
 Frame = -1

Query: 557 RISDEHRRHESAVDDSYKRTRDEYRDQHPADDD--------SYRRDIGDYGEQEQDHGFE 402
           R+  E   +    D+  +   +EY ++   D+D        +   ++ DYG+ +   G  
Sbjct: 10  RVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDEDDGNGGNQNAEEHEVEDYGDTKG--GDR 67

Query: 401 DEENDKVAEPDEVFDVSGSLKHEEKPVEPKDVADGEKHAELLSL 270
           ++  +++AE D+      +   +EKPV P D  + EK++ LLSL
Sbjct: 68  EDGQEEIAEDDDNHIDIETADDDEKPVSPIDEEEREKYSHLLSL 111


>ref|XP_010428144.1| PREDICTED: nucleolin-like isoform X1 [Camelina sativa]
          Length = 509

 Score =  114 bits (286), Expect(2) = 1e-28
 Identities = 54/88 (61%), Positives = 66/88 (75%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFEV+L+KD++  +SKG+AFV F  KD AQKAIEE+H KE KGKT+RCSLS+ K+RLF
Sbjct: 154 GEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLF 213

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PK+             GPGVENIE
Sbjct: 214 IGNIPKNWTEDEFRKVIEDVGPGVENIE 241



 Score = 40.0 bits (92), Expect(2) = 1e-28
 Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
 Frame = -1

Query: 563 YRRISDEHRRHESAVDDSYKRTRDEYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDK 384
           Y  + DE    +    +  +   DE  D +  + ++   ++ DYG+ +   G  ++  ++
Sbjct: 28  YSEMEDEVEEEQVEEYEEEEEEEDEDDDNNAGNQNAEEHEVEDYGDNKG--GDREDGQEE 85

Query: 383 VAEPDEV-FDV-SGSLKHEEKPVEPKDVADGEKHAELLSL 270
           +AE D+   D+ +     +EKP  P D  + EK+++LLSL
Sbjct: 86  IAEDDDNHIDIETADDDDDEKPASPIDDEEKEKYSQLLSL 125


>ref|XP_010428150.1| PREDICTED: nucleolin-like isoform X2 [Camelina sativa]
           gi|727419729|ref|XP_010428158.1| PREDICTED:
           nucleolin-like isoform X2 [Camelina sativa]
          Length = 499

 Score =  114 bits (286), Expect(2) = 1e-28
 Identities = 54/88 (61%), Positives = 66/88 (75%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFEV+L+KD++  +SKG+AFV F  KD AQKAIEE+H KE KGKT+RCSLS+ K+RLF
Sbjct: 144 GEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLF 203

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PK+             GPGVENIE
Sbjct: 204 IGNIPKNWTEDEFRKVIEDVGPGVENIE 231



 Score = 40.0 bits (92), Expect(2) = 1e-28
 Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
 Frame = -1

Query: 563 YRRISDEHRRHESAVDDSYKRTRDEYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDK 384
           Y  + DE    +    +  +   DE  D +  + ++   ++ DYG+ +   G  ++  ++
Sbjct: 18  YSEMEDEVEEEQVEEYEEEEEEEDEDDDNNAGNQNAEEHEVEDYGDNKG--GDREDGQEE 75

Query: 383 VAEPDEV-FDV-SGSLKHEEKPVEPKDVADGEKHAELLSL 270
           +AE D+   D+ +     +EKP  P D  + EK+++LLSL
Sbjct: 76  IAEDDDNHIDIETADDDDDEKPASPIDDEEKEKYSQLLSL 115


>ref|XP_007051446.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508703707|gb|EOX95603.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 506

 Score =  115 bits (288), Expect(2) = 2e-28
 Identities = 54/88 (61%), Positives = 67/88 (76%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFE++L+KD+E  ESKG+AFV F +K+ AQKAIEE+H KE +GKT+RCSLS+ K+RLF
Sbjct: 129 GEIFEIRLMKDRESGESKGYAFVAFKSKEVAQKAIEELHSKEFRGKTIRCSLSETKNRLF 188

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGNVPKS             GPGVEN+E
Sbjct: 189 IGNVPKSWTEDEFKKIIEGVGPGVENVE 216



 Score = 38.5 bits (88), Expect(2) = 2e-28
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
 Frame = -1

Query: 521 VDDSYKRTRDEYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDKVAEPDEVFDVSGS- 345
           +DD+Y    D+  ++H  +D     D GD   +E D    ++    V+  D+  ++  S 
Sbjct: 13  LDDNYMEEEDDDVEEHLEED--VVDDGGDGNGEENDEEEYEDSKSGVSGKDQSSEIERSH 70

Query: 344 -----LKHEEKPVEPKDVADGEKHAELLSL 270
                ++ EEKPV      + EKHA+LL+L
Sbjct: 71  IETEHVEDEEKPVASVSEEEKEKHAQLLAL 100


>ref|XP_007051447.1| RNA-binding family protein isoform 2 [Theobroma cacao]
           gi|508703708|gb|EOX95604.1| RNA-binding family protein
           isoform 2 [Theobroma cacao]
          Length = 493

 Score =  115 bits (288), Expect(2) = 2e-28
 Identities = 54/88 (61%), Positives = 67/88 (76%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFE++L+KD+E  ESKG+AFV F +K+ AQKAIEE+H KE +GKT+RCSLS+ K+RLF
Sbjct: 129 GEIFEIRLMKDRESGESKGYAFVAFKSKEVAQKAIEELHSKEFRGKTIRCSLSETKNRLF 188

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGNVPKS             GPGVEN+E
Sbjct: 189 IGNVPKSWTEDEFKKIIEGVGPGVENVE 216



 Score = 38.5 bits (88), Expect(2) = 2e-28
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
 Frame = -1

Query: 521 VDDSYKRTRDEYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDKVAEPDEVFDVSGS- 345
           +DD+Y    D+  ++H  +D     D GD   +E D    ++    V+  D+  ++  S 
Sbjct: 13  LDDNYMEEEDDDVEEHLEED--VVDDGGDGNGEENDEEEYEDSKSGVSGKDQSSEIERSH 70

Query: 344 -----LKHEEKPVEPKDVADGEKHAELLSL 270
                ++ EEKPV      + EKHA+LL+L
Sbjct: 71  IETEHVEDEEKPVASVSEEEKEKHAQLLAL 100


>ref|XP_007051448.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 3, partial
           [Theobroma cacao] gi|508703709|gb|EOX95605.1|
           RNA-binding (RRM/RBD/RNP motifs) family protein isoform
           3, partial [Theobroma cacao]
          Length = 440

 Score =  115 bits (288), Expect(2) = 2e-28
 Identities = 54/88 (61%), Positives = 67/88 (76%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFE++L+KD+E  ESKG+AFV F +K+ AQKAIEE+H KE +GKT+RCSLS+ K+RLF
Sbjct: 129 GEIFEIRLMKDRESGESKGYAFVAFKSKEVAQKAIEELHSKEFRGKTIRCSLSETKNRLF 188

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGNVPKS             GPGVEN+E
Sbjct: 189 IGNVPKSWTEDEFKKIIEGVGPGVENVE 216



 Score = 38.5 bits (88), Expect(2) = 2e-28
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
 Frame = -1

Query: 521 VDDSYKRTRDEYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDKVAEPDEVFDVSGS- 345
           +DD+Y    D+  ++H  +D     D GD   +E D    ++    V+  D+  ++  S 
Sbjct: 13  LDDNYMEEEDDDVEEHLEED--VVDDGGDGNGEENDEEEYEDSKSGVSGKDQSSEIERSH 70

Query: 344 -----LKHEEKPVEPKDVADGEKHAELLSL 270
                ++ EEKPV      + EKHA+LL+L
Sbjct: 71  IETEHVEDEEKPVASVSEEEKEKHAQLLAL 100


>ref|XP_008784874.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Phoenix
           dactylifera] gi|672123055|ref|XP_008784875.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein R-like [Phoenix
           dactylifera]
          Length = 467

 Score =  132 bits (333), Expect = 3e-28
 Identities = 66/100 (66%), Positives = 74/100 (74%)
 Frame = -2

Query: 301 TERSMLNCSLXXGEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTL 122
           TE  +       GEIFEV+LVKDK+ RESKGFAF+TFT KDA QKAIEE+HDKE KG+TL
Sbjct: 117 TEEDLRELCEKFGEIFEVRLVKDKDTRESKGFAFITFTNKDAGQKAIEELHDKEFKGRTL 176

Query: 121 RCSLSQVKHRLFIGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           RCSLSQ KHRLFIGNVPKS            +GPGVEN+E
Sbjct: 177 RCSLSQAKHRLFIGNVPKSLSEDELRKILEESGPGVENVE 216


>ref|XP_010522898.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Tarenaya
           hassleriana] gi|729448930|ref|XP_010522899.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein Q [Tarenaya
           hassleriana]
          Length = 491

 Score =  112 bits (281), Expect(2) = 3e-28
 Identities = 52/88 (59%), Positives = 67/88 (76%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFEV+L++D++  ESKG+AFV F  K+ AQKAI+E+H KELKG+T+RCS+S+ K+RLF
Sbjct: 136 GEIFEVRLIRDRDSGESKGYAFVAFKTKETAQKAIDELHGKELKGRTIRCSVSETKNRLF 195

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PKS             GPGVENIE
Sbjct: 196 IGNIPKSWTDDEFRKIIESVGPGVENIE 223



 Score = 40.8 bits (94), Expect(2) = 3e-28
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
 Frame = -1

Query: 557 RISDEHRRHESAVDDSYKRTRDEYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDKVA 378
           R+  E   +    D++ +   +EY ++   D      +  D  E+  D   ED E D+  
Sbjct: 10  RVDLEEGNYSEMDDEAEEEQVEEYEEEDDGDGGDANAEEHDEEEEYGDTKVEDREEDQDQ 69

Query: 377 EPDEV---FDVSGSLKHEEKPVEPKDVADGEKHAELLSL 270
            P+E     D+  + + EEKP  P +  + EK++ LLSL
Sbjct: 70  SPEEDQTHIDIEAT-EDEEKPGSPVNKEEREKYSHLLSL 107


>ref|XP_013612359.1| PREDICTED: nucleolin-like [Brassica oleracea var. oleracea]
           gi|922568140|ref|XP_013612360.1| PREDICTED:
           nucleolin-like [Brassica oleracea var. oleracea]
          Length = 510

 Score =  114 bits (284), Expect(2) = 5e-28
 Identities = 54/88 (61%), Positives = 66/88 (75%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFEV+++KD++  ESKG+AFV F  KD AQKAIEE+H KE KGKT+RCSLS+ K+RLF
Sbjct: 155 GEIFEVRVMKDRDSGESKGYAFVGFRTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLF 214

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PK+             GPGVENIE
Sbjct: 215 IGNIPKNWTEDEFRKVIEEVGPGVENIE 242



 Score = 38.9 bits (89), Expect(2) = 5e-28
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
 Frame = -1

Query: 545 EHRRHESAVDDSYKRTRDEYRDQHPADDD----SYRRDIGDYGEQEQDHGFED--EEND- 387
           E    E  V++  +   D+  D    D++    S  R++ DYG + +  G E+  E++D 
Sbjct: 22  EDEVEEEQVEEFVEEEEDDEDDDDDDDEEEGGGSQEREVEDYGGERKGGGREELAEDDDD 81

Query: 386 -----KVAEPDEVFDVS-GSLKHEEKPVEPKDVADGEKHAELLSL 270
                + AE D+   +   + + EEKP  P D  + EK++ LLSL
Sbjct: 82  NHIDIETAEDDDDNHIDIETAEDEEKPASPIDEDEREKYSHLLSL 126


>ref|XP_012490169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Gossypium
           raimondii] gi|823187399|ref|XP_012490170.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein R [Gossypium
           raimondii] gi|823187402|ref|XP_012490171.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein R [Gossypium
           raimondii] gi|763774489|gb|KJB41612.1| hypothetical
           protein B456_007G112300 [Gossypium raimondii]
           gi|763774490|gb|KJB41613.1| hypothetical protein
           B456_007G112300 [Gossypium raimondii]
          Length = 479

 Score =  112 bits (281), Expect(2) = 5e-28
 Identities = 51/88 (57%), Positives = 65/88 (73%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFE++L+KDKE  ESKG+AFV F  K+ A+KA++E+H KE +GKT+RCS S+ K+RLF
Sbjct: 129 GEIFEIRLIKDKESGESKGYAFVAFKTKEVAEKAVDELHSKEFRGKTIRCSFSETKNRLF 188

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PKS             GPGVENIE
Sbjct: 189 IGNIPKSLTEDDFRKAIESVGPGVENIE 216



 Score = 40.0 bits (92), Expect(2) = 5e-28
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
 Frame = -1

Query: 521 VDDSYKRTRDEYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDKVAEPDEVFDVSGS- 345
           +DD+Y    D+  ++H  D+D       + GE+  +  FED ++  V   D+  +V  S 
Sbjct: 13  LDDNYMEEEDDDVEEH-VDEDGVDSGGDENGEENDEEEFEDSKSG-VDGKDQSLEVERSH 70

Query: 344 -----LKHEEKPVEPKDVADGEKHAELLSL 270
                ++ EEKP       + EKHA+LL+L
Sbjct: 71  IETEHVEDEEKPTASISEEEKEKHAQLLAL 100


>gb|KJB41615.1| hypothetical protein B456_007G112300 [Gossypium raimondii]
          Length = 460

 Score =  112 bits (281), Expect(2) = 5e-28
 Identities = 51/88 (57%), Positives = 65/88 (73%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFE++L+KDKE  ESKG+AFV F  K+ A+KA++E+H KE +GKT+RCS S+ K+RLF
Sbjct: 129 GEIFEIRLIKDKESGESKGYAFVAFKTKEVAEKAVDELHSKEFRGKTIRCSFSETKNRLF 188

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PKS             GPGVENIE
Sbjct: 189 IGNIPKSLTEDDFRKAIESVGPGVENIE 216



 Score = 40.0 bits (92), Expect(2) = 5e-28
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
 Frame = -1

Query: 521 VDDSYKRTRDEYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDKVAEPDEVFDVSGS- 345
           +DD+Y    D+  ++H  D+D       + GE+  +  FED ++  V   D+  +V  S 
Sbjct: 13  LDDNYMEEEDDDVEEH-VDEDGVDSGGDENGEENDEEEFEDSKSG-VDGKDQSLEVERSH 70

Query: 344 -----LKHEEKPVEPKDVADGEKHAELLSL 270
                ++ EEKP       + EKHA+LL+L
Sbjct: 71  IETEHVEDEEKPTASISEEEKEKHAQLLAL 100


>gb|KJB41614.1| hypothetical protein B456_007G112300 [Gossypium raimondii]
          Length = 434

 Score =  112 bits (281), Expect(2) = 5e-28
 Identities = 51/88 (57%), Positives = 65/88 (73%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFE++L+KDKE  ESKG+AFV F  K+ A+KA++E+H KE +GKT+RCS S+ K+RLF
Sbjct: 129 GEIFEIRLIKDKESGESKGYAFVAFKTKEVAEKAVDELHSKEFRGKTIRCSFSETKNRLF 188

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PKS             GPGVENIE
Sbjct: 189 IGNIPKSLTEDDFRKAIESVGPGVENIE 216



 Score = 40.0 bits (92), Expect(2) = 5e-28
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
 Frame = -1

Query: 521 VDDSYKRTRDEYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDKVAEPDEVFDVSGS- 345
           +DD+Y    D+  ++H  D+D       + GE+  +  FED ++  V   D+  +V  S 
Sbjct: 13  LDDNYMEEEDDDVEEH-VDEDGVDSGGDENGEENDEEEFEDSKSG-VDGKDQSLEVERSH 70

Query: 344 -----LKHEEKPVEPKDVADGEKHAELLSL 270
                ++ EEKP       + EKHA+LL+L
Sbjct: 71  IETEHVEDEEKPTASISEEEKEKHAQLLAL 100


>gb|KJB41616.1| hypothetical protein B456_007G112300 [Gossypium raimondii]
          Length = 409

 Score =  112 bits (281), Expect(2) = 5e-28
 Identities = 51/88 (57%), Positives = 65/88 (73%)
 Frame = -2

Query: 265 GEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTLRCSLSQVKHRLF 86
           GEIFE++L+KDKE  ESKG+AFV F  K+ A+KA++E+H KE +GKT+RCS S+ K+RLF
Sbjct: 129 GEIFEIRLIKDKESGESKGYAFVAFKTKEVAEKAVDELHSKEFRGKTIRCSFSETKNRLF 188

Query: 85  IGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           IGN+PKS             GPGVENIE
Sbjct: 189 IGNIPKSLTEDDFRKAIESVGPGVENIE 216



 Score = 40.0 bits (92), Expect(2) = 5e-28
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
 Frame = -1

Query: 521 VDDSYKRTRDEYRDQHPADDDSYRRDIGDYGEQEQDHGFEDEENDKVAEPDEVFDVSGS- 345
           +DD+Y    D+  ++H  D+D       + GE+  +  FED ++  V   D+  +V  S 
Sbjct: 13  LDDNYMEEEDDDVEEH-VDEDGVDSGGDENGEENDEEEFEDSKSG-VDGKDQSLEVERSH 70

Query: 344 -----LKHEEKPVEPKDVADGEKHAELLSL 270
                ++ EEKP       + EKHA+LL+L
Sbjct: 71  IETEHVEDEEKPTASISEEEKEKHAQLLAL 100


>ref|XP_008777550.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform
           X2 [Phoenix dactylifera]
          Length = 482

 Score =  130 bits (327), Expect = 1e-27
 Identities = 65/100 (65%), Positives = 76/100 (76%)
 Frame = -2

Query: 301 TERSMLNCSLXXGEIFEVKLVKDKEKRESKGFAFVTFTAKDAAQKAIEEIHDKELKGKTL 122
           TE ++ +     GEI +V+LVKDK+ RESKGFAF+TFT KDAAQKAIEE+HDKE KG+TL
Sbjct: 123 TEENLRDLCEAFGEIHDVRLVKDKDTRESKGFAFITFTNKDAAQKAIEELHDKEFKGRTL 182

Query: 121 RCSLSQVKHRLFIGNVPKSXXXXXXXXXXXXTGPGVENIE 2
           RCSLSQ KHRLFIGNVPKS            +GPGV+NIE
Sbjct: 183 RCSLSQAKHRLFIGNVPKSLSEEELRKILEESGPGVQNIE 222


Top