BLASTX nr result

ID: Ophiopogon21_contig00013489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00013489
         (400 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008780263.1| PREDICTED: putative F-box protein At2g33200,...    77   5e-12
ref|XP_010906113.1| PREDICTED: F-box protein SKIP23-like [Elaeis...    73   7e-11

>ref|XP_008780263.1| PREDICTED: putative F-box protein At2g33200, partial [Phoenix
           dactylifera]
          Length = 352

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 37/92 (40%), Positives = 59/92 (64%)
 Frame = -3

Query: 365 REHVYLVQSGGELLVVIQACPHHEPWPEGTPTFRILKLNGVTMMWVKAVDMLGDRVLFIS 186
           R HV+LV+S G+LL V+ +CP+       TP+F  L+ +  T  W +A++ +GDR+LF+ 
Sbjct: 259 RTHVFLVESDGDLLAVVMSCPNLR---RSTPSFSFLRWDVETSFW-EAIESIGDRLLFLG 314

Query: 185 ENGSVSLLARKHRNPGGRVYMAGDESNGVFKL 90
            + S+S+ AR+H   GGR+Y  G  S G++ L
Sbjct: 315 LSSSISVAAREHGVAGGRIYTIGPHSTGIYDL 346


>ref|XP_010906113.1| PREDICTED: F-box protein SKIP23-like [Elaeis guineensis]
          Length = 391

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
 Frame = -3

Query: 359 HVYLVQSGGELLVVIQACPHHEPWPEGTPTFRILKLNGVTMMWVKAVDMLGDRVLFISEN 180
           H +L++S G+LLVV   CP+       + +FRI + N  T  WV  ++ + DR+LF+   
Sbjct: 255 HAFLLESDGDLLVVAMNCPNLYE----STSFRIWRRNVETSSWVP-MESIADRILFLGPG 309

Query: 179 GSVSLLARKHRNPGGRVYMAGDESNGVFKLDMGWGNV-CCAHAWCRPTWVLPCL 21
             +S  AR+H   GGR++  G +S G++ L    G V C   +  RPTW+ P L
Sbjct: 310 SPISTSAREHGVAGGRIFTIGPDSPGIYDLRTHRGEVFCSCMSSSRPTWIAPRL 363


Top