BLASTX nr result
ID: Ophiopogon21_contig00013402
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00013402
(1208 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [E... 606 e-170
ref|XP_008789193.1| PREDICTED: replication factor C subunit 3 is... 600 e-169
ref|XP_008789192.1| PREDICTED: replication factor C subunit 3 is... 592 e-166
ref|XP_010243510.1| PREDICTED: replication factor C subunit 3 [N... 582 e-163
ref|XP_009409236.1| PREDICTED: replication factor C subunit 3 [M... 576 e-161
ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group] g... 575 e-161
ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi... 575 e-161
gb|ACG35868.1| replication factor C subunit 3 [Zea mays] 574 e-161
ref|XP_003570529.1| PREDICTED: replication factor C subunit 3 [B... 572 e-160
dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa... 568 e-159
ref|XP_002454641.1| hypothetical protein SORBIDRAFT_04g034710 [S... 567 e-159
ref|XP_006647989.1| PREDICTED: replication factor C subunit 3-li... 566 e-159
ref|XP_004954087.1| PREDICTED: replication factor C subunit 3 [S... 565 e-158
dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgar... 565 e-158
gb|EMT26703.1| Replication factor C subunit 5 [Aegilops tauschii] 561 e-157
ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [V... 560 e-157
gb|KMZ62297.1| Replication factor C subunit 3 [Zostera marina] 558 e-156
gb|EMS57217.1| Replication factor C subunit 5 [Triticum urartu] 558 e-156
ref|XP_010095414.1| Replication factor C subunit 5 [Morus notabi... 557 e-156
ref|XP_010675030.1| PREDICTED: replication factor C subunit 3 [B... 555 e-155
>ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [Elaeis guineensis]
Length = 356
Score = 606 bits (1563), Expect = e-170
Identities = 312/347 (89%), Positives = 329/347 (94%), Gaps = 1/347 (0%)
Frame = -3
Query: 1077 MTETTSAMEIDG-APPPIPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTID 901
M E T+ MEIDG AP PNKGK+ + +DGKSA PWVEKYRPQSLADVAAHRDIVDTID
Sbjct: 1 MVEATAPMEIDGDAPLARPNKGKAALG-SDGKSA-PWVEKYRPQSLADVAAHRDIVDTID 58
Query: 900 RLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQ 721
RLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYG+QYHNMILELNASDDRGI+VVRQQIQ
Sbjct: 59 RLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQ 118
Query: 720 DFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 541
DFASARSLSFGAK SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP
Sbjct: 119 DFASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 178
Query: 540 ALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQST 361
ALQSRCTRFRFAPLD SHIRERL+YVIKAEGLDV ESGLTALVRLS+GDMRKALNILQST
Sbjct: 179 ALQSRCTRFRFAPLDASHIRERLEYVIKAEGLDVVESGLTALVRLSNGDMRKALNILQST 238
Query: 360 HMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVRE 181
HMASQH+TEEAVYLCTGNPMPKDIEQIA+WLLNES+T SF+YISD KM+KGLALVDIVRE
Sbjct: 239 HMASQHVTEEAVYLCTGNPMPKDIEQIAYWLLNESYTASFRYISDIKMKKGLALVDIVRE 298
Query: 180 VTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
VT+FVFKI+MPSDVRVKLI+DLADIEYRLS CNDKLQLGSLISTFT
Sbjct: 299 VTMFVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGSLISTFT 345
>ref|XP_008789193.1| PREDICTED: replication factor C subunit 3 isoform X2 [Phoenix
dactylifera]
Length = 355
Score = 600 bits (1548), Expect = e-169
Identities = 307/346 (88%), Positives = 328/346 (94%)
Frame = -3
Query: 1077 MTETTSAMEIDGAPPPIPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTIDR 898
M E T+ MEIDG P NK K+ ++ +DGKSA PWVEKYRPQSLADVAAHRDIVDTIDR
Sbjct: 1 MAEATAPMEIDGDAPARSNKDKAPLA-SDGKSA-PWVEKYRPQSLADVAAHRDIVDTIDR 58
Query: 897 LTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQD 718
LTNENRLPHLLLYGPPGTGKTSTILA+ARKLYG+QY N+ILELNASDDRGI+VVRQQIQD
Sbjct: 59 LTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRNLILELNASDDRGIDVVRQQIQD 118
Query: 717 FASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA 538
FASARSLSFGAK SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA
Sbjct: 119 FASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA 178
Query: 537 LQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTH 358
LQSRCTRFRFAPLD +HIRERL+YVIKAEGLDV+ESGLTALVRLS+GDMRKALNILQSTH
Sbjct: 179 LQSRCTRFRFAPLDATHIRERLEYVIKAEGLDVAESGLTALVRLSNGDMRKALNILQSTH 238
Query: 357 MASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVREV 178
MASQH+TEE+VYLCTGNPMPKDIEQIA+WLLNESFT SF+YISD KMRKGLALVDIVREV
Sbjct: 239 MASQHVTEESVYLCTGNPMPKDIEQIAYWLLNESFTASFRYISDIKMRKGLALVDIVREV 298
Query: 177 TLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
T+FVFKI+MPSDVRVKLI++LADIEYRLS GCNDKLQLGSLISTFT
Sbjct: 299 TMFVFKIQMPSDVRVKLINNLADIEYRLSFGCNDKLQLGSLISTFT 344
>ref|XP_008789192.1| PREDICTED: replication factor C subunit 3 isoform X1 [Phoenix
dactylifera]
Length = 358
Score = 592 bits (1525), Expect = e-166
Identities = 306/349 (87%), Positives = 327/349 (93%), Gaps = 3/349 (0%)
Frame = -3
Query: 1077 MTETTSAMEIDGAPPPIPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTIDR 898
M E T+ MEIDG P NK K+ ++ +DGKSA PWVEKYRPQSLADVAAHRDIVDTIDR
Sbjct: 1 MAEATAPMEIDGDAPARSNKDKAPLA-SDGKSA-PWVEKYRPQSLADVAAHRDIVDTIDR 58
Query: 897 LTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQD 718
LTNENRLPHLLLYGPPGTGKTSTILA+ARKLYG+QY N+ILELNASDDRGI+VVRQQIQD
Sbjct: 59 LTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRNLILELNASDDRGIDVVRQQIQD 118
Query: 717 FASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA 538
FASARSLSFGAK SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA
Sbjct: 119 FASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA 178
Query: 537 LQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTH 358
LQSRCTRFRFAPLD +HIRERL+YVIKAEGLDV+ESGLTALVRLS+GDMRKALNILQSTH
Sbjct: 179 LQSRCTRFRFAPLDATHIRERLEYVIKAEGLDVAESGLTALVRLSNGDMRKALNILQSTH 238
Query: 357 MASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKY---ISDTKMRKGLALVDIV 187
MASQH+TEE+VYLCTGNPMPKDIEQIA+WLLNESFT SF+ ISD KMRKGLALVDIV
Sbjct: 239 MASQHVTEESVYLCTGNPMPKDIEQIAYWLLNESFTASFRSCLDISDIKMRKGLALVDIV 298
Query: 186 REVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
REVT+FVFKI+MPSDVRVKLI++LADIEYRLS GCNDKLQLGSLISTFT
Sbjct: 299 REVTMFVFKIQMPSDVRVKLINNLADIEYRLSFGCNDKLQLGSLISTFT 347
>ref|XP_010243510.1| PREDICTED: replication factor C subunit 3 [Nelumbo nucifera]
Length = 358
Score = 582 bits (1500), Expect = e-163
Identities = 298/348 (85%), Positives = 323/348 (92%), Gaps = 2/348 (0%)
Frame = -3
Query: 1077 MTETTSAMEIDGAPPPIP-NKGKSVIS-PTDGKSAAPWVEKYRPQSLADVAAHRDIVDTI 904
M ET S MEIDGA NKGK+VI+ PTDGK A PWVEKYRPQSLADVAAHRDIVDTI
Sbjct: 1 MAETASPMEIDGADNRAKSNKGKNVIAVPTDGK-ATPWVEKYRPQSLADVAAHRDIVDTI 59
Query: 903 DRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQI 724
DRLTNEN+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q+HNMILELNASDDRGI+VVRQQI
Sbjct: 60 DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGTQFHNMILELNASDDRGIDVVRQQI 119
Query: 723 QDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII 544
QDFAS +S SFGAK SVKLVLLDEADAMTKDAQFALRRVIEK+TK+TRF LICNHVNKII
Sbjct: 120 QDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLICNHVNKII 179
Query: 543 PALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQS 364
PALQSRCTRFRFAPLD SH+ +RL+YVI+AEGLDVSE GL ALVRLSSGDMRKALNILQS
Sbjct: 180 PALQSRCTRFRFAPLDASHVMDRLKYVIEAEGLDVSEGGLAALVRLSSGDMRKALNILQS 239
Query: 363 THMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVR 184
THMASQHITEEAVYLCTGNPMPKDIEQI+FWLLNESF S++ IS+ KM+KGLALVDIVR
Sbjct: 240 THMASQHITEEAVYLCTGNPMPKDIEQISFWLLNESFATSYRCISEMKMKKGLALVDIVR 299
Query: 183 EVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
EVT+F+FKIKMPSDVRV+LI+DLADIEYRLS GCNDKLQLGSLI++FT
Sbjct: 300 EVTMFIFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFT 347
>ref|XP_009409236.1| PREDICTED: replication factor C subunit 3 [Musa acuminata subsp.
malaccensis]
Length = 357
Score = 576 bits (1485), Expect = e-161
Identities = 295/348 (84%), Positives = 321/348 (92%), Gaps = 2/348 (0%)
Frame = -3
Query: 1077 MTETTSAMEIDGAPPP--IPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTI 904
M + ++ MEID P +PNKGK ++ +D KS PWVEKYRPQSLADVAAHRDI+DTI
Sbjct: 1 MADASALMEIDEDAPDSSLPNKGKIALA-SDPKSV-PWVEKYRPQSLADVAAHRDIIDTI 58
Query: 903 DRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQI 724
DRLT+ENRLPHLLLYGPPGTGKTSTILA+ARKLYG QY NMILELNASDDRGI+VVRQQI
Sbjct: 59 DRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGMQYKNMILELNASDDRGIDVVRQQI 118
Query: 723 QDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII 544
QDFASARSLSFG K +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII
Sbjct: 119 QDFASARSLSFGPKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII 178
Query: 543 PALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQS 364
PALQSRCTRFRFAPLD S+IRER ++VIKAEGLDV+ESGLTALVRLSSGDMRKALNILQS
Sbjct: 179 PALQSRCTRFRFAPLDSSNIRERTEHVIKAEGLDVTESGLTALVRLSSGDMRKALNILQS 238
Query: 363 THMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVR 184
THMAS H+T+EAVYLCTGNPMPKDIEQIA+WLLNESFT +F+YISD KM+KGLAL+DIVR
Sbjct: 239 THMASPHVTDEAVYLCTGNPMPKDIEQIAYWLLNESFTAAFRYISDVKMKKGLALIDIVR 298
Query: 183 EVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
EVT+FVFKIKMPSD+RVKLI+DLADIEYRL CNDKLQLGSLISTFT
Sbjct: 299 EVTMFVFKIKMPSDIRVKLINDLADIEYRLCFACNDKLQLGSLISTFT 346
>ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group]
gi|75132556|sp|Q6YZ54.1|RFC3_ORYSJ RecName:
Full=Replication factor C subunit 3; Short=OsRFC3;
AltName: Full=Activator 1 subunit 3
gi|46805779|dbj|BAD17147.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|46806135|dbj|BAD17365.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|113537811|dbj|BAF10194.1| Os02g0775200 [Oryza sativa
Japonica Group] gi|215697717|dbj|BAG91711.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218191668|gb|EEC74095.1| hypothetical protein
OsI_09136 [Oryza sativa Indica Group]
gi|937906107|dbj|BAS81161.1| Os02g0775200 [Oryza sativa
Japonica Group]
Length = 361
Score = 575 bits (1482), Expect = e-161
Identities = 291/341 (85%), Positives = 317/341 (92%), Gaps = 2/341 (0%)
Frame = -3
Query: 1056 MEIDGAPPP--IPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 883
M+ID A PP KGK+ +S T G AAPWVEKYRPQSL DVAAHRDIVDTIDRLTNEN
Sbjct: 10 MDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLTNEN 69
Query: 882 RLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASAR 703
RLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQQIQDFASAR
Sbjct: 70 RLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQDFASAR 129
Query: 702 SLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRC 523
SLSFGAK SVK+VLLDEADAMTKDAQFALRRVIEKHT+STRFALICNHVNKIIPALQSRC
Sbjct: 130 SLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRC 189
Query: 522 TRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQH 343
TRFRFAPLD +H+RERL+++I++EGLDV + GLTALVRLS+GDMRKALNILQSTHMAS+
Sbjct: 190 TRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQ 249
Query: 342 ITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVREVTLFVF 163
ITEEAVYLCTGNPMPKDIEQIA+WLLNESF+ SFK ISD KMRKGLALVDI+REVT+FVF
Sbjct: 250 ITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDIIREVTMFVF 309
Query: 162 KIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
KI+MPSDVR+KLI+DLADIEYRLS CNDKLQLG+LISTFT
Sbjct: 310 KIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFT 350
>ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi|194696262|gb|ACF82215.1|
unknown [Zea mays] gi|413939151|gb|AFW73702.1|
replication factor C subunit 3 [Zea mays]
Length = 362
Score = 575 bits (1482), Expect = e-161
Identities = 296/350 (84%), Positives = 318/350 (90%), Gaps = 5/350 (1%)
Frame = -3
Query: 1074 TETTSAMEIDGAPPPIPN-----KGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVD 910
T + M+ID A PP P KGK+ +S G AAPWVEKYRPQSLADVAAHRDIVD
Sbjct: 4 TAAAALMDIDAAAPPPPPPGAAAKGKAPLSA--GGRAAPWVEKYRPQSLADVAAHRDIVD 61
Query: 909 TIDRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQ 730
TIDRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQ
Sbjct: 62 TIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQ 121
Query: 729 QIQDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNK 550
QIQDFA ARSLSFGA+ SVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNK
Sbjct: 122 QIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNK 181
Query: 549 IIPALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNIL 370
IIPALQSRCTRFRFAPLD SH+RERLQ++IK+EGL V + GLTALVRLS+GDMRKALNIL
Sbjct: 182 IIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNIL 241
Query: 369 QSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDI 190
QSTHMASQ ITEEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFKYISD KMRKGLALVDI
Sbjct: 242 QSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDI 301
Query: 189 VREVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
+REVT+FVFKI+MPSDVRVKLI+DLADIEYRLS CNDKLQLG+LISTFT
Sbjct: 302 IREVTMFVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGALISTFT 351
>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
Length = 362
Score = 574 bits (1480), Expect = e-161
Identities = 295/350 (84%), Positives = 319/350 (91%), Gaps = 5/350 (1%)
Frame = -3
Query: 1074 TETTSAMEIDGAPPPIPN-----KGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVD 910
T + M+ID A PP P KGK+++S G AAPWVEKYRPQSLADVAAHRDIVD
Sbjct: 4 TAAAAPMDIDAAAPPPPPPGAAAKGKALLSA--GGRAAPWVEKYRPQSLADVAAHRDIVD 61
Query: 909 TIDRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQ 730
TIDRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQ
Sbjct: 62 TIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQ 121
Query: 729 QIQDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNK 550
QIQDFA ARSLSFGA+ SVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNK
Sbjct: 122 QIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNK 181
Query: 549 IIPALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNIL 370
IIPALQSRCTRFRFAPLD SH+RERLQ++IK+EGL V + GLTALVRLS+GDMRKALNIL
Sbjct: 182 IIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNIL 241
Query: 369 QSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDI 190
QSTHMASQ ITEEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFKYISD KMRKGLALVDI
Sbjct: 242 QSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDI 301
Query: 189 VREVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
+REVT+FVFKI+MPSDVRVKLI++LADIEYRLS CNDKLQLG+LISTFT
Sbjct: 302 IREVTMFVFKIQMPSDVRVKLINNLADIEYRLSFACNDKLQLGALISTFT 351
>ref|XP_003570529.1| PREDICTED: replication factor C subunit 3 [Brachypodium distachyon]
gi|944066072|gb|KQK01663.1| hypothetical protein
BRADI_3g57410 [Brachypodium distachyon]
Length = 358
Score = 572 bits (1475), Expect = e-160
Identities = 290/344 (84%), Positives = 317/344 (92%)
Frame = -3
Query: 1068 TTSAMEIDGAPPPIPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTIDRLTN 889
TT+ M+ID A PP +KGK+ +S ++PWVEKYRPQSLADVAAHRDIVDTIDRLT+
Sbjct: 6 TTAPMDIDAAAPP-HSKGKAPLSAAAAVRSSPWVEKYRPQSLADVAAHRDIVDTIDRLTD 64
Query: 888 ENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFAS 709
ENRLPHLLLYGPPGTGKTSTILA+ARK+YGSQY NMILELNASD+RGI VVRQQIQDFAS
Sbjct: 65 ENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQDFAS 124
Query: 708 ARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQS 529
A SLSFGAK +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIPALQS
Sbjct: 125 AHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQS 184
Query: 528 RCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMAS 349
RCTRFRFAPLD SH+ ERLQ++IK+EGLDV E GLTALVRLSSGDMRKALNILQSTHMAS
Sbjct: 185 RCTRFRFAPLDGSHVSERLQHIIKSEGLDVDEGGLTALVRLSSGDMRKALNILQSTHMAS 244
Query: 348 QHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVREVTLF 169
Q ITEEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFKYISD KMRKGLAL+DI+REVT+F
Sbjct: 245 QQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALIDIIREVTMF 304
Query: 168 VFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFTT 37
VFKIKMP +VRVKLI+DLADIEYRL+ CNDKLQLG+LISTFT+
Sbjct: 305 VFKIKMPCNVRVKLINDLADIEYRLTFACNDKLQLGALISTFTS 348
>dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa Japonica Group]
Length = 367
Score = 568 bits (1465), Expect = e-159
Identities = 291/347 (83%), Positives = 317/347 (91%), Gaps = 8/347 (2%)
Frame = -3
Query: 1056 MEIDGAPPP--IPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 883
M+ID A PP KGK+ +S T G AAPWVEKYRPQSL DVAAHRDIVDTIDRLTNEN
Sbjct: 10 MDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLTNEN 69
Query: 882 RLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASAR 703
RLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQQIQDFASAR
Sbjct: 70 RLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQDFASAR 129
Query: 702 SLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRC 523
SLSFGAK SVK+VLLDEADAMTKDAQFALRRVIEKHT+STRFALICNHVNKIIPALQSRC
Sbjct: 130 SLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRC 189
Query: 522 TRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQH 343
TRFRFAPLD +H+RERL+++I++EGLDV + GLTALVRLS+GDMRKALNILQSTHMAS+
Sbjct: 190 TRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQ 249
Query: 342 ITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFK------YISDTKMRKGLALVDIVRE 181
ITEEAVYLCTGNPMPKDIEQIA+WLLNESF+ SFK ISD KMRKGLALVDI+RE
Sbjct: 250 ITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCILNYQSISDMKMRKGLALVDIIRE 309
Query: 180 VTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
VT+FVFKI+MPSDVR+KLI+DLADIEYRLS CNDKLQLG+LISTFT
Sbjct: 310 VTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFT 356
>ref|XP_002454641.1| hypothetical protein SORBIDRAFT_04g034710 [Sorghum bicolor]
gi|241934472|gb|EES07617.1| hypothetical protein
SORBIDRAFT_04g034710 [Sorghum bicolor]
Length = 362
Score = 567 bits (1461), Expect = e-159
Identities = 292/350 (83%), Positives = 316/350 (90%), Gaps = 5/350 (1%)
Frame = -3
Query: 1074 TETTSAMEIDGAPPPIPN-----KGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVD 910
T + M+ID A PP P KGK+ +S G AAPWVEKYRPQSLADVAAHRDIVD
Sbjct: 4 TAAAAPMDIDAAAPPPPPPGAAAKGKAPLSA--GGRAAPWVEKYRPQSLADVAAHRDIVD 61
Query: 909 TIDRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQ 730
TIDRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQ
Sbjct: 62 TIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQ 121
Query: 729 QIQDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNK 550
QIQDFA ARSLSFGA+ SVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNK
Sbjct: 122 QIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNK 181
Query: 549 IIPALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNIL 370
IIPALQSRCTRFRFAPLD SH+RERLQ++IK+EGL V E GLTALVRLS+GDMRKALNIL
Sbjct: 182 IIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNIL 241
Query: 369 QSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDI 190
QSTHMASQ ITEEAVYLCTGNPMP DIE+IAFWLLNE F+ SFK+ISD KMRKGLALVDI
Sbjct: 242 QSTHMASQQITEEAVYLCTGNPMPNDIERIAFWLLNEPFSTSFKHISDMKMRKGLALVDI 301
Query: 189 VREVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
+REVT+FVFKI+MPSDVRVKLI++LADIEYRLS CNDKLQLG+LIS FT
Sbjct: 302 IREVTMFVFKIEMPSDVRVKLINNLADIEYRLSFACNDKLQLGALISAFT 351
>ref|XP_006647989.1| PREDICTED: replication factor C subunit 3-like [Oryza brachyantha]
Length = 362
Score = 567 bits (1460), Expect = e-159
Identities = 290/348 (83%), Positives = 315/348 (90%), Gaps = 3/348 (0%)
Frame = -3
Query: 1074 TETTSAMEIDGAPPPIPN---KGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTI 904
T + M+ID A PP P K K+ +S T G AAPWVEKYRPQSL DVAAHRDIVDTI
Sbjct: 5 TTAATPMDIDAAAPP-PGAYAKDKAPLSTTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTI 63
Query: 903 DRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQI 724
DRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQQI
Sbjct: 64 DRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQI 123
Query: 723 QDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII 544
QDFASARSLSFGAK SVK+VLLDEADAMTKDAQFALRRVIEKHT+STRFALICNHVNKII
Sbjct: 124 QDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKII 183
Query: 543 PALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQS 364
PALQSRCTRFRFAPLD +H+R+RLQ++I +EGLDV + GLTALVRLS+GDMRKALNILQS
Sbjct: 184 PALQSRCTRFRFAPLDGTHVRDRLQHIILSEGLDVDDGGLTALVRLSNGDMRKALNILQS 243
Query: 363 THMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVR 184
THMAS+ ITEEAVYLCTGNPM KDIEQIAFWLLNE F+ SFK ISD KMRKGLALVDI+R
Sbjct: 244 THMASKQITEEAVYLCTGNPMQKDIEQIAFWLLNEPFSTSFKCISDMKMRKGLALVDIIR 303
Query: 183 EVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
EVT+FVFKI+MPSDVR+KLI+DLADIEYRL CNDKLQLG+LISTFT
Sbjct: 304 EVTMFVFKIQMPSDVRIKLINDLADIEYRLCFACNDKLQLGALISTFT 351
>ref|XP_004954087.1| PREDICTED: replication factor C subunit 3 [Setaria italica]
gi|944267497|gb|KQL31737.1| hypothetical protein
SETIT_017595mg [Setaria italica]
Length = 361
Score = 565 bits (1457), Expect = e-158
Identities = 290/345 (84%), Positives = 315/345 (91%), Gaps = 5/345 (1%)
Frame = -3
Query: 1056 MEIDGAPPPIPN-----KGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTIDRLT 892
M++D A PP P KGK+ ++ AAPWVEKYRPQSLADVAAHRDIVDTIDRLT
Sbjct: 10 MDVDAAAPPPPPAGAAAKGKAPLNAPG--RAAPWVEKYRPQSLADVAAHRDIVDTIDRLT 67
Query: 891 NENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFA 712
NENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVR QIQDFA
Sbjct: 68 NENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRLQIQDFA 127
Query: 711 SARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQ 532
ARSLSFGA+ SVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIPALQ
Sbjct: 128 GARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQ 187
Query: 531 SRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMA 352
SRCTRFRFAPLD SH+RERLQ++IK+EGL V E GLTALVRLS+GDMRKALNILQSTHMA
Sbjct: 188 SRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNILQSTHMA 247
Query: 351 SQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVREVTL 172
SQ ITEEAVYLCTGNPMPKDIE+IAFWLLNE F+ SFK+ISD KMRKGLALVDI+REVT+
Sbjct: 248 SQQITEEAVYLCTGNPMPKDIEEIAFWLLNEPFSTSFKHISDMKMRKGLALVDIIREVTM 307
Query: 171 FVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFTT 37
FVFKI+MPSDVRVKLI+DLADIEYRLS CNDKLQLG+LISTFT+
Sbjct: 308 FVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGALISTFTS 352
>dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531584|dbj|BAJ97796.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 359
Score = 565 bits (1456), Expect = e-158
Identities = 284/340 (83%), Positives = 313/340 (92%)
Frame = -3
Query: 1056 MEIDGAPPPIPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRL 877
M+IDGA P KGK+ +S ++PWVEKYRPQSLADVAAHRDIVDTIDRLT+ENRL
Sbjct: 10 MDIDGAAAPPAFKGKAPLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTIDRLTDENRL 69
Query: 876 PHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASARSL 697
PHLLLYGPPGTGKTSTILA+ARK+YGSQY NMILELNASD+RGI VVRQQIQDFASA SL
Sbjct: 70 PHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQDFASAHSL 129
Query: 696 SFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTR 517
SFGAK +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIPALQSRCTR
Sbjct: 130 SFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTR 189
Query: 516 FRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQHIT 337
FRFAPLD SH+ ERL+++IK+EGLDV E GL+ALVRLS+GDMRK+LNILQSTHMASQ IT
Sbjct: 190 FRFAPLDGSHVSERLRHIIKSEGLDVDEGGLSALVRLSNGDMRKSLNILQSTHMASQQIT 249
Query: 336 EEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVREVTLFVFKI 157
EEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFK+I+D KMRKGLAL+DI+REVT+FVFKI
Sbjct: 250 EEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKHIADMKMRKGLALIDIIREVTMFVFKI 309
Query: 156 KMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFTT 37
KMPS VRVKLI+DLADIEYRL+ CNDKLQLG+LISTFTT
Sbjct: 310 KMPSSVRVKLINDLADIEYRLTFACNDKLQLGALISTFTT 349
>gb|EMT26703.1| Replication factor C subunit 5 [Aegilops tauschii]
Length = 359
Score = 561 bits (1445), Expect = e-157
Identities = 287/349 (82%), Positives = 315/349 (90%), Gaps = 2/349 (0%)
Frame = -3
Query: 1077 MTETTSA--MEIDGAPPPIPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTI 904
M TT+A M+ID A KGK+ +S ++PWVEKYRPQSLADVAAHRDIVDTI
Sbjct: 1 MAGTTAAAPMDIDAAAVRPATKGKATLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTI 60
Query: 903 DRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQI 724
DRLT+ENRLPHLLLYGPPGTGKTSTILA+ARK+YGSQY NMILELNASD+RGI VVRQQI
Sbjct: 61 DRLTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQI 120
Query: 723 QDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII 544
QDFASA SLSFGAK +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKII
Sbjct: 121 QDFASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKII 180
Query: 543 PALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQS 364
PALQSRCTRFRFAPLD +++ ERLQ+VIK+EGLDV + GLTALVRLS+GDMRKALNILQS
Sbjct: 181 PALQSRCTRFRFAPLDGTNVSERLQHVIKSEGLDVDKGGLTALVRLSNGDMRKALNILQS 240
Query: 363 THMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVR 184
THMAS ITEEAVYLCTGNPMPKDIEQIA WLLNE F+ SFKYISDTKMRKGLAL+DI+R
Sbjct: 241 THMASSQITEEAVYLCTGNPMPKDIEQIASWLLNEPFSTSFKYISDTKMRKGLALIDIIR 300
Query: 183 EVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFTT 37
EVT+FVFKI MPS+VRVKLI+DLADIEYRL+ CNDKLQLG+LISTFTT
Sbjct: 301 EVTMFVFKINMPSNVRVKLINDLADIEYRLTFACNDKLQLGALISTFTT 349
>ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [Vitis vinifera]
gi|302141794|emb|CBI18997.3| unnamed protein product
[Vitis vinifera]
Length = 360
Score = 560 bits (1443), Expect = e-157
Identities = 290/350 (82%), Positives = 314/350 (89%), Gaps = 4/350 (1%)
Frame = -3
Query: 1077 MTETTSAMEIDGAPPPI--PNKGKSVI--SPTDGKSAAPWVEKYRPQSLADVAAHRDIVD 910
M E + M+ID + NKGKSV+ P D K A PWVEKYRPQSLADVAAHRDIVD
Sbjct: 1 MAEAVTVMDIDEEDNHLLKANKGKSVVVGGPPDRK-ATPWVEKYRPQSLADVAAHRDIVD 59
Query: 909 TIDRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQ 730
TIDRLT+ENRLPHLLLYGPPGTGKTSTILA+ARKLYG Q+HNMILELNASDDRGI+VVRQ
Sbjct: 60 TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQ 119
Query: 729 QIQDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNK 550
QIQDFAS +S SFGAK SVKLVLLDEADAMTKDAQFALRRVIEK+TK+TRFALICNHVNK
Sbjct: 120 QIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 179
Query: 549 IIPALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNIL 370
IIPALQSRCTRFRFAPLD H+ ERL++VI AE LDVSESGL ALVRLSSGDMRKALNIL
Sbjct: 180 IIPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNIL 239
Query: 369 QSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDI 190
QSTHMASQ ITEEAVYLCTGNP+PKDIEQI++WLLNESF SF IS+ KMRKGLALVD+
Sbjct: 240 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVDV 299
Query: 189 VREVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
VREVT+FVFKIKMPSDVRV+LI+DLADIEYRLS GCNDKLQLGSLI++FT
Sbjct: 300 VREVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFT 349
>gb|KMZ62297.1| Replication factor C subunit 3 [Zostera marina]
Length = 360
Score = 558 bits (1439), Expect = e-156
Identities = 283/350 (80%), Positives = 317/350 (90%), Gaps = 6/350 (1%)
Frame = -3
Query: 1071 ETTSAMEIDGA----PPPIPNK--GKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVD 910
E +S MEIDGA PP+P+K GKS+ + T +APWVEKYRPQSL DVAAHRDIVD
Sbjct: 2 EMSSLMEIDGALGSLTPPMPSKLKGKSIAALTPDGKSAPWVEKYRPQSLDDVAAHRDIVD 61
Query: 909 TIDRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQ 730
TIDRLTNEN+LPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASDDRGI VVRQ
Sbjct: 62 TIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGSQYKNMILELNASDDRGIGVVRQ 121
Query: 729 QIQDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNK 550
QIQDFAS S FGAK S+KLVLLDE+DAMTK+AQFALRRVIE++TKSTRFALICNHVNK
Sbjct: 122 QIQDFASTHS--FGAKSSIKLVLLDESDAMTKEAQFALRRVIERYTKSTRFALICNHVNK 179
Query: 549 IIPALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNIL 370
IIPALQSRCTRFRFAPLD +H+R+RL +VI+AEGLD+++ GL+A+VRLS+GDMRKALNIL
Sbjct: 180 IIPALQSRCTRFRFAPLDSTHVRDRLHHVIQAEGLDINDDGLSAVVRLSNGDMRKALNIL 239
Query: 369 QSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDI 190
QSTHMAS H+TE+AVYLCTGNP+PKDIEQI+ WLLNESFT FKYIS+ KMRKGLALVDI
Sbjct: 240 QSTHMASPHVTEDAVYLCTGNPLPKDIEQISHWLLNESFTAGFKYISEIKMRKGLALVDI 299
Query: 189 VREVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
VREVTLF+F IKMP+DVR++LI+DLADIEYRLS GCNDKLQLGSLISTFT
Sbjct: 300 VREVTLFIFNIKMPADVRIQLINDLADIEYRLSFGCNDKLQLGSLISTFT 349
>gb|EMS57217.1| Replication factor C subunit 5 [Triticum urartu]
Length = 357
Score = 558 bits (1437), Expect = e-156
Identities = 283/347 (81%), Positives = 314/347 (90%), Gaps = 7/347 (2%)
Frame = -3
Query: 1056 MEIDGAPPPIPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRL 877
M+IDGA P KGK+ +S ++PWVEKYRPQSLADVAAHRDIVDTIDRLT+ENRL
Sbjct: 1 MDIDGAAAPPAFKGKAPLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTIDRLTDENRL 60
Query: 876 PHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASARSL 697
PHLLLYGPPGTGKTSTILA+ARK+YG+QY NMILELNASD+RGI VVRQQIQDFASA SL
Sbjct: 61 PHLLLYGPPGTGKTSTILAVARKIYGAQYGNMILELNASDERGIGVVRQQIQDFASAHSL 120
Query: 696 SFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTR 517
SFGAK +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIPALQSRCTR
Sbjct: 121 SFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTR 180
Query: 516 FRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQHIT 337
FRFAPLD SH+ ERL+++IK+EGLDV E GLTALVRLS+GDMRK+LNILQSTHMASQ IT
Sbjct: 181 FRFAPLDGSHVTERLRHIIKSEGLDVDEGGLTALVRLSNGDMRKSLNILQSTHMASQQIT 240
Query: 336 EEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLALVDIVREVTLFVFKI 157
EEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFK+I+D KMRKGLAL+DI+REVT+FVFKI
Sbjct: 241 EEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKHIADMKMRKGLALIDIIREVTMFVFKI 300
Query: 156 KMPSDVRVKLISDLADIE-------YRLSLGCNDKLQLGSLISTFTT 37
KMPS+VRVKLI+DLADI+ YRL+ CNDKLQLG+LISTFTT
Sbjct: 301 KMPSNVRVKLINDLADIDSRFSSHKYRLTFACNDKLQLGALISTFTT 347
>ref|XP_010095414.1| Replication factor C subunit 5 [Morus notabilis]
gi|703163098|ref|XP_010113225.1| Replication factor C
subunit 5 [Morus notabilis] gi|587870830|gb|EXB60106.1|
Replication factor C subunit 5 [Morus notabilis]
gi|587990838|gb|EXC75062.1| Replication factor C subunit
5 [Morus notabilis]
Length = 365
Score = 557 bits (1435), Expect = e-156
Identities = 290/356 (81%), Positives = 319/356 (89%), Gaps = 10/356 (2%)
Frame = -3
Query: 1077 MTETTSAMEIDG-------APPPIPNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRD 919
MTE S M+ID + PI NKGKS +P+DGK A PWVEKYRPQSLADVAAHRD
Sbjct: 1 MTEVVSLMDIDDDDNAGDRSAKPI-NKGKSGAAPSDGK-ATPWVEKYRPQSLADVAAHRD 58
Query: 918 IVDTIDRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINV 739
I+DTIDRLT+ENRLPHLLLYGPPGTGKTSTILA+ARKLYG+QYHNMILELNASDDRGI+V
Sbjct: 59 IIDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDV 118
Query: 738 VRQQIQDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNH 559
VRQQIQDFAS +S SFG K SVKLVLLDEADAMTKDAQFALRRVIEK+TK+TRF+LICN+
Sbjct: 119 VRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFSLICNN 178
Query: 558 VNKIIPALQSRCTRFRFAPLDVSHIRERLQYVIKAEG---LDVSESGLTALVRLSSGDMR 388
VNKIIPALQSRCTRFRFAPLD H+ ERL++VI+AEG LDVSESGLTA VRLS+GDMR
Sbjct: 179 VNKIIPALQSRCTRFRFAPLDPVHVNERLKHVIEAEGQVLLDVSESGLTAFVRLSNGDMR 238
Query: 387 KALNILQSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKG 208
KALNILQSTHMAS+ ITEE VYLCTGNP+PKDIEQI++WLLNESF ESFK IS+ K RKG
Sbjct: 239 KALNILQSTHMASKKITEEEVYLCTGNPLPKDIEQISYWLLNESFAESFKQISNMKGRKG 298
Query: 207 LALVDIVREVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
LALVDIVREVT+FVFKIKMPSD RV+LI+DLADIEYRLS GCNDKLQLGSLI++FT
Sbjct: 299 LALVDIVREVTMFVFKIKMPSDARVQLINDLADIEYRLSFGCNDKLQLGSLIASFT 354
>ref|XP_010675030.1| PREDICTED: replication factor C subunit 3 [Beta vulgaris subsp.
vulgaris] gi|870868912|gb|KMT19698.1| hypothetical
protein BVRB_1g007540 [Beta vulgaris subsp. vulgaris]
Length = 363
Score = 555 bits (1431), Expect = e-155
Identities = 279/353 (79%), Positives = 320/353 (90%), Gaps = 7/353 (1%)
Frame = -3
Query: 1077 MTETTSAMEIDGA-----PPPI--PNKGKSVISPTDGKSAAPWVEKYRPQSLADVAAHRD 919
M ET S M++D A P PI PNKGK+V+ P DGKS WVEKYRPQSLADVAAHRD
Sbjct: 1 MAETISLMDVDEADNDNVPSPIIKPNKGKNVVVPGDGKSGL-WVEKYRPQSLADVAAHRD 59
Query: 918 IVDTIDRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINV 739
I+DTIDRLT+EN+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q+HNMILELNASD+RGI+V
Sbjct: 60 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 119
Query: 738 VRQQIQDFASARSLSFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNH 559
VRQQIQDFAS +S SFGAK VKLVLLDEADAMTKDAQFALRRVIEK+TKSTRFALICN+
Sbjct: 120 VRQQIQDFASTQSFSFGAKAHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 179
Query: 558 VNKIIPALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKAL 379
VNK+IPALQSRCTRFRFAPLD +H+ ERL++VI+ EG+DV+ESGL A+VRLS+GDMRKAL
Sbjct: 180 VNKVIPALQSRCTRFRFAPLDSTHVTERLKHVIEGEGIDVTESGLAAIVRLSTGDMRKAL 239
Query: 378 NILQSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKYISDTKMRKGLAL 199
NILQSTHMASQ ITEEAVYLCTGNP+PKDIEQI++WLLNE+F S+ +SD K RKGLAL
Sbjct: 240 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFVTSYSQVSDMKTRKGLAL 299
Query: 198 VDIVREVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 40
VDI+REVT+FVF+I+MPSDVRV+LI+D+ADIEYRLS GC+DKLQLGSLI++FT
Sbjct: 300 VDIIREVTMFVFRIRMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLIASFT 352