BLASTX nr result
ID: Ophiopogon21_contig00013386
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00013386
(1463 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010242233.1| PREDICTED: chloroplastic group IIA intron sp... 424 e-115
ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [S... 407 e-110
ref|XP_010912991.1| PREDICTED: chloroplastic group IIA intron sp... 405 e-110
ref|XP_008797776.1| PREDICTED: chloroplastic group IIA intron sp... 402 e-109
ref|XP_009412926.1| PREDICTED: chloroplastic group IIA intron sp... 399 e-108
ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron sp... 397 e-107
ref|XP_008242355.1| PREDICTED: chloroplastic group IIA intron sp... 396 e-107
ref|XP_010238097.1| PREDICTED: chloroplastic group IIA intron sp... 395 e-107
gb|EMS55813.1| Chloroplastic group IIA intron splicing facilitat... 394 e-106
ref|XP_010090056.1| Chloroplastic group IIA intron splicing faci... 392 e-106
gb|EMT30138.1| Chloroplastic group IIA intron splicing facilitat... 391 e-106
ref|XP_008450865.1| PREDICTED: chloroplastic group IIA intron sp... 390 e-105
ref|XP_008652616.1| PREDICTED: chloroplastic group IIA intron sp... 389 e-105
ref|XP_008652617.1| PREDICTED: chloroplastic group IIA intron sp... 389 e-105
ref|XP_012449426.1| PREDICTED: chloroplastic group IIA intron sp... 387 e-104
gb|KJB65181.1| hypothetical protein B456_010G083500 [Gossypium r... 387 e-104
ref|XP_012449427.1| PREDICTED: chloroplastic group IIA intron sp... 387 e-104
ref|XP_009799178.1| PREDICTED: chloroplastic group IIA intron sp... 387 e-104
ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prun... 387 e-104
ref|XP_006661163.1| PREDICTED: chloroplastic group IIA intron sp... 387 e-104
>ref|XP_010242233.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Nelumbo nucifera]
Length = 868
Score = 424 bits (1089), Expect = e-115
Identities = 242/490 (49%), Positives = 303/490 (61%), Gaps = 22/490 (4%)
Frame = -3
Query: 1404 KRKKKPRPSFYDQTIERWSLRISSPRSRFPWQEQPAAETRKKNDDSRDTHLNSGLDFENP 1225
K+K+K +PSFYDQ +RWSL++ SPR R PWQEQ + + +D + NS
Sbjct: 68 KKKRKLKPSFYDQIRDRWSLKLGSPRERLPWQEQESQGQEETGNDQSSSAPNSS------ 121
Query: 1224 ESDFEGRSKGESFGRNGPWVPLGMQRGAAPWAHGGKLRE------------GLEFGGKIE 1081
EG SF + LG + +APW+HG K R+ L GGK
Sbjct: 122 ----EGDGGNPSFDDLASFA-LGNRSISAPWSHGDKPRKPHFDSTTEIVQNSLNNGGKFA 176
Query: 1080 SLG-----QNVSKFDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDS 916
+ + K E+ S+ +E ++ N DS
Sbjct: 177 EVHYFSEKSTIPKISEDSVVNHSGSLKEEQRSDYIRDDSVKIGPPLTGFSGEQSTGNGDS 236
Query: 915 EVLVRLPWERANGGGDGERLR-RRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGV 739
VRLPWE+ +R R RRS TELA KT+PE ELRRLRNVALRMKER+KVGAAG+
Sbjct: 237 ---VRLPWEKEKFLESVDRGRWRRSTTELAAKTVPETELRRLRNVALRMKERIKVGAAGI 293
Query: 738 TEAIVESIHKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMT 559
T+ +V+SI +KWK DEVVKL FEGPP L+MKRTHE LE KT G+VIWRSGSS+VLYRGM+
Sbjct: 294 TQDLVDSIIEKWKEDEVVKLKFEGPPALNMKRTHEALESKTRGLVIWRSGSSVVLYRGMS 353
Query: 558 YKLPCVQSYAKVADTDSSHKTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSS 379
YK PCV+SY K D ++ S+ S D + N ++ + S GT ++ S
Sbjct: 354 YKFPCVESYIK--DNQANPDIASHSKESKIDFSGNICVTDAIQTKESSSTGTMTYDKDLS 411
Query: 378 ----EILDVDSFLDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKN 211
++ D+++ LD+LGPR+ DWSGC P PVDAD+LP VVPGY PPFRLL Y ++ LKN
Sbjct: 412 RELMDMTDLNNLLDELGPRFRDWSGCEPKPVDADLLPCVVPGYKPPFRLLPYGIRHCLKN 471
Query: 210 REMTSLRRLARTMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAE 31
+EMTS RRLAR+M PHFALGRNRQ +GLARAMVKLWE+S IAKIAIKRGV NT NERMAE
Sbjct: 472 KEMTSFRRLARSMPPHFALGRNRQLQGLARAMVKLWERSEIAKIAIKRGVQNTCNERMAE 531
Query: 30 EIKKLTGGVL 1
E+K+LTGG L
Sbjct: 532 ELKRLTGGTL 541
>ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
gi|241923491|gb|EER96635.1| hypothetical protein
SORBIDRAFT_02g022940 [Sorghum bicolor]
Length = 962
Score = 407 bits (1047), Expect = e-110
Identities = 245/575 (42%), Positives = 316/575 (54%), Gaps = 89/575 (15%)
Frame = -3
Query: 1458 PTPALHSSNNGNSSSIDKKRKKKPRPSFYDQTIERWSLRISSPRSRFPWQEQPAAETRKK 1279
P+ + +++G KK+ + +PSF + + RWS R S R+ PW++
Sbjct: 51 PSASSPVASDGAGGRKSKKKSRPLKPSFEEHALRRWSSRAPSQRASVPWEQPQQQSPSLP 110
Query: 1278 NDDSRDTHLNSGLDFENPESDFEGRSKGESFG-----------RNGPWVP---------- 1162
+ DSR++ G + S RS + FG G W
Sbjct: 111 HRDSRESGGAGGRNRSGGGSSATLRSIVDYFGGVSSNDDGVGAEEGAWDTTAVQGEAARE 170
Query: 1161 ------------LGMQRGAAPWAHG---------GKLREG-------------------- 1105
LG Q +APW HG G + EG
Sbjct: 171 QDDGSHFRPSYLLGSQPVSAPWIHGEESTSDRVSGPVAEGEEGMDMSDVSDDELSLEDRD 230
Query: 1104 ---LEFGGKIESLGQNVSKFDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVV 934
++ G ++ + +D+ T SS +L V+ +V
Sbjct: 231 KEEIDDGEELPTGSSEEQLYDDYATPTVNSSYEVDLSADRDSYGGRFDRSMRQGSVNTIV 290
Query: 933 AL------NSDSEVLVRL---------------PWERANGGGD---GERLRRRSNTELAE 826
SD + L PWER + G R+ RRSNTELAE
Sbjct: 291 KTLRGSMEESDPNAAIELSNAEDFVQKLGPVLLPWEREEEDDEAFSGGRVGRRSNTELAE 350
Query: 825 KTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESIHKKWKVDEVVKLWFEGPPTLHMK 646
+TIPE ELRRLR+ ALRMKER+KVG GVT+ IVESIH+KWKVDEVVK+ FEGPP+L+MK
Sbjct: 351 RTIPEPELRRLRDTALRMKERIKVGPGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMK 410
Query: 645 RTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQSYAKVADTDSSHKTFQSSEMSAND 466
RTH++LE +TGG+VIWRSG S+VLYRGM Y L CVQSYAK +TDS + +S ++
Sbjct: 411 RTHDLLEDRTGGVVIWRSGRSVVLYRGMNYNLQCVQSYAKSIETDSGKEVDDASSAVSSH 470
Query: 465 AARNKATNGFVRVLKPSDVGTTSFANSSSEILDVDSFLDQLGPRYEDWSGCNPLPVDADM 286
N + + + T +F+ SSE D+D+FLDQLGPRY DWSG P+PVDAD+
Sbjct: 471 GGHNLQDSREAGAKRLTS--TENFSLESSETFDIDNFLDQLGPRYRDWSGRGPVPVDADL 528
Query: 285 LPGVVPGYSPPFRLLAYKVKPALKNREMTSLRRLARTMSPHFALGRNRQHEGLARAMVKL 106
LPGVV GY PPFR+L YK+K L+++EMT+LRRL+R +PHFALGRNR+H+GLA AMVKL
Sbjct: 529 LPGVVHGYKPPFRVLPYKIKSTLRDKEMTTLRRLSRQTAPHFALGRNREHQGLAAAMVKL 588
Query: 105 WEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGVL 1
WEKSAIAKIAIKRGVPNT N+RMAEEIKKLTGGVL
Sbjct: 589 WEKSAIAKIAIKRGVPNTCNDRMAEEIKKLTGGVL 623
>ref|XP_010912991.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Elaeis guineensis]
Length = 1105
Score = 405 bits (1040), Expect = e-110
Identities = 216/358 (60%), Positives = 254/358 (70%), Gaps = 5/358 (1%)
Frame = -3
Query: 1059 KFDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVL-----VRLP 895
+FD ++ VS+IV++LK+ DE D+ N+D + V P
Sbjct: 439 EFDAVSGKSNVSAIVEQLKSSMDQDSSNLEVNISYDESDDEGGSNTDYYIANLMGPVSFP 498
Query: 894 WERANGGGDGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESI 715
WE+ G D E+L R+SNTELAE+TIPE ELRRLR+ ALRMKERMKVG AGVTEA+V+SI
Sbjct: 499 WEQDGGSSDREQLHRKSNTELAERTIPEPELRRLRDAALRMKERMKVGPAGVTEAVVQSI 558
Query: 714 HKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQS 535
H+KWK +EVVKL FEGPP+L MKRTHE+LERKTGG+VIWRSG S+VLYRGMTY+LPCVQS
Sbjct: 559 HEKWKENEVVKLRFEGPPSLCMKRTHEVLERKTGGLVIWRSGRSLVLYRGMTYELPCVQS 618
Query: 534 YAKVADTDSSHKTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSEILDVDSF 355
Y+K+ S SS PS+ S++ D+DS
Sbjct: 619 YSKLVTAKSDSNLMTSSA-------------------NPSE--------GSTDTSDIDSL 651
Query: 354 LDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRRLART 175
LDQLGPR+ DWSG +PLPVDAD+LPGVVPGY PPFRLL YK + +L+ EMT LRRLAR
Sbjct: 652 LDQLGPRFRDWSGRSPLPVDADLLPGVVPGYKPPFRLLPYKTRSSLREGEMTFLRRLARK 711
Query: 174 MSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGVL 1
M PHFALGRNRQH+GLA A+VKLWEKSAIAKIAIKRGVPNT NERMAEEIKKLTGGVL
Sbjct: 712 MPPHFALGRNRQHQGLATAIVKLWEKSAIAKIAIKRGVPNTCNERMAEEIKKLTGGVL 769
Score = 67.8 bits (164), Expect = 2e-08
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -3
Query: 1407 KKRKKKPRPSFYDQTIERWSLRISSPRSRFPWQEQPAAETR 1285
KK+K+KPRP+FY QTIERWSL+ISS RSRFPWQE A E +
Sbjct: 79 KKKKRKPRPNFYVQTIERWSLKISSERSRFPWQELAAEEKK 119
>ref|XP_008797776.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Phoenix dactylifera]
Length = 1017
Score = 402 bits (1034), Expect = e-109
Identities = 213/358 (59%), Positives = 254/358 (70%), Gaps = 5/358 (1%)
Frame = -3
Query: 1059 KFDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVL-----VRLP 895
+FD ++ VS+I+++LK+ D+ N+D + V P
Sbjct: 352 EFDAVSGKSNVSAILEKLKSSMDQDSSSIDSNISCGVSDDERGSNTDYYIANLMGPVSFP 411
Query: 894 WERANGGGDGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESI 715
WER G D E+L R+SNTELAE+TIPE ELRRLR+ ALRMKERMKVG AGVTEA+V+SI
Sbjct: 412 WERDGGSRDREQLHRKSNTELAERTIPEPELRRLRDAALRMKERMKVGPAGVTEAVVQSI 471
Query: 714 HKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQS 535
H+KWK +EVVKL FEGPP+L MKRTHE+LERKTGG+VIWRSG S+VLYRGMTY+LPCVQS
Sbjct: 472 HEKWKENEVVKLRFEGPPSLCMKRTHEVLERKTGGLVIWRSGRSLVLYRGMTYELPCVQS 531
Query: 534 YAKVADTDSSHKTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSEILDVDSF 355
Y+K+ +T S SS PS+ S + D+D+
Sbjct: 532 YSKLVNTKSDSNLMTSS-------------------ANPSE--------GSIDTSDIDNL 564
Query: 354 LDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRRLART 175
LDQLGPR++DWSG NPLPVDAD+LPGVVPGY PPFRLL YK + +L+ EMT LRRLAR
Sbjct: 565 LDQLGPRFKDWSGRNPLPVDADLLPGVVPGYKPPFRLLPYKTRSSLREGEMTFLRRLARK 624
Query: 174 MSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGVL 1
M PHFALGRNRQH+GLA A+VKLWEKSAIAKIAIKRGVPNT N+RMAEEIKKLTGG+L
Sbjct: 625 MPPHFALGRNRQHQGLATAVVKLWEKSAIAKIAIKRGVPNTCNDRMAEEIKKLTGGIL 682
Score = 59.3 bits (142), Expect = 8e-06
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Frame = -3
Query: 825 KTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESIHKKWKVDEVVKLWFEGPPTLHMK 646
+T+ ++E R + L+M+ +G GV + +E++H WK E+VK++ +G +K
Sbjct: 820 ETVTDEERFLFRKIGLKMRSYFPLGRRGVFDGTIENMHLSWKYRELVKIFVKGKTFAQVK 879
Query: 645 RTHEILERKTGGMVI----WRSGSSIVLYRGMTYKLP 547
LE ++GG++I G +I++YRG Y+ P
Sbjct: 880 HIAISLEAESGGVLISLDKTTKGYAIIIYRGKNYQRP 916
>ref|XP_009412926.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 1014
Score = 399 bits (1025), Expect = e-108
Identities = 211/325 (64%), Positives = 252/325 (77%), Gaps = 10/325 (3%)
Frame = -3
Query: 945 DNVVALNSDSEVLVRLPWERANGGGDGERLRRRSNTELAEKTIPEDELRRLRNVALRMKE 766
+NVV L S V LPWER +GE+L R SNTELAE+ IPE ELRRLR+ ALRMKE
Sbjct: 375 NNVVKLVSP----VLLPWERETDSKEGEQLHR-SNTELAERAIPEPELRRLRDAALRMKE 429
Query: 765 RMKVGAAGVTEAIVESIHKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGS 586
RM VG AGVTEA+V++IH+KWK EVVKL FEG P+L+MKRTHEILE KTGG+VIWRSG
Sbjct: 430 RMTVGPAGVTEAVVKNIHEKWKEAEVVKLRFEGTPSLNMKRTHEILENKTGGLVIWRSGR 489
Query: 585 SIVLYRGMTYKLPCVQSYAKVADTDSS----------HKTFQSSEMSANDAARNKATNGF 436
S+VLY+GMTY+LPC+Q+Y+K+A+TDS+ H T SE S N + R+ A +
Sbjct: 490 SVVLYKGMTYELPCIQTYSKLANTDSNCIPSIKDYFVHITGNPSEESFNISRRSAADSSA 549
Query: 435 VRVLKPSDVGTTSFANSSSEILDVDSFLDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSP 256
PS+ F ++S D+D+ LDQLGPRY+DWSG NPLPVDAD+LPGV+PGY+P
Sbjct: 550 CG--NPSE----QFPDTS----DIDNILDQLGPRYQDWSGRNPLPVDADLLPGVIPGYAP 599
Query: 255 PFRLLAYKVKPALKNREMTSLRRLARTMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIA 76
PFRLL YK + L++REMT+LRRLARTM PHFALGRNRQH+GLA A+VKLWEKS+I KIA
Sbjct: 600 PFRLLPYKTRSTLRDREMTALRRLARTMPPHFALGRNRQHQGLAAAIVKLWEKSSIVKIA 659
Query: 75 IKRGVPNTHNERMAEEIKKLTGGVL 1
IKRG+PNT NERMAEEIKKLTGGVL
Sbjct: 660 IKRGIPNTSNERMAEEIKKLTGGVL 684
Score = 60.5 bits (145), Expect = 4e-06
Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = -3
Query: 825 KTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESIHKKWKVDEVVKLWFEGPPTLHMK 646
+T+ ++E RN+ L+M+ + +G GV + VE++H WK E+VK+ +G +K
Sbjct: 823 ETVSDEERALFRNIGLKMRGALLLGRRGVFDGTVENMHLNWKHRELVKILVKGKSFAQVK 882
Query: 645 RTHEILERKTGGMVI----WRSGSSIVLYRGMTYKLP 547
LE ++GG++I G +I++YRG Y+ P
Sbjct: 883 HYAISLEAESGGVLISLDKTTKGYAIIIYRGKNYQRP 919
>ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Setaria italica]
gi|944259996|gb|KQL24253.1| hypothetical protein
SETIT_028831mg [Setaria italica]
Length = 963
Score = 397 bits (1020), Expect = e-107
Identities = 212/367 (57%), Positives = 260/367 (70%), Gaps = 9/367 (2%)
Frame = -3
Query: 1074 GQNVSKFDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVR-- 901
G NV FD ++V+SIV L++ NV S++E V+
Sbjct: 274 GSNVGGFDRSMRRSSVNSIVKTLRSSMEESSP------------NVTIERSNAEDFVQKL 321
Query: 900 ----LPWERANGGGD---GERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAG 742
LPWER + G + RRSNTELAE+TIPE+ELRRLR+ ALRMKER+KVG+ G
Sbjct: 322 GPVLLPWEREEEDDEVFGGGKAGRRSNTELAERTIPENELRRLRDAALRMKERIKVGSGG 381
Query: 741 VTEAIVESIHKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGM 562
VT+ IVESIH+KWKVDEVVK+ FEGPP+L+MKRTH++LE +TGG+VIWRSG S+VLYRGM
Sbjct: 382 VTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGIVIWRSGRSVVLYRGM 441
Query: 561 TYKLPCVQSYAKVADTDSSHKTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSS 382
Y L CVQSYAK DS + ++ SA N + V + G S +
Sbjct: 442 NYNLQCVQSYAKSTQIDSDKEVADAN--SAIHGRHNLQKSRADGVKHSTSSGNFSLELEA 499
Query: 381 SEILDVDSFLDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREM 202
+E D+DSFLDQLGPRY+DWSG +P+PVDAD+LPGVVPGY P+R+L YK+K L+++EM
Sbjct: 500 TEAFDIDSFLDQLGPRYKDWSGRSPIPVDADLLPGVVPGYKQPYRVLPYKIKSTLRDKEM 559
Query: 201 TSLRRLARTMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIK 22
T+LRRLAR +PHFALGRNR+H+GLA AMVKLWEKSAIAKIAIKRGVPNT N+RMAEEIK
Sbjct: 560 TALRRLARQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGVPNTCNDRMAEEIK 619
Query: 21 KLTGGVL 1
KLTGGVL
Sbjct: 620 KLTGGVL 626
>ref|XP_008242355.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Prunus mume]
gi|645274471|ref|XP_008242356.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like [Prunus mume]
Length = 930
Score = 396 bits (1018), Expect = e-107
Identities = 235/532 (44%), Positives = 314/532 (59%), Gaps = 64/532 (12%)
Frame = -3
Query: 1404 KRKKKPRPSFYDQTIERWSLRISSPRSRFPWQEQPAAETRKKNDDSRDTHLNSGLDFENP 1225
++K+KP+PSF+ Q ++WS++++SPR +FPWQ+Q +K + D D E
Sbjct: 72 RKKRKPKPSFFVQIQDKWSMKVNSPRDKFPWQKQNELVQEEKEEVEED-------DEEEE 124
Query: 1224 ESDFEGRSKGESFGRN--GPWVPLGMQRGA----------APWAHG-------------- 1123
E FE + + G+ G V + + APWAHG
Sbjct: 125 EEVFEPKISKQEEGQKCYGERVAEPVNQKVSFSLPNRIIYAPWAHGSKRITPQVDSEPET 184
Query: 1122 -------GKLREGLEFGGKIESLGQNVSK-------FDEERP-------ETTVSSI---- 1018
GK +G +I++ V K FD R E + SI
Sbjct: 185 SQHSGAQGKNLDGFAGHSEIDTTSGAVKKEKSFERRFDSNRKLERERAGEVGIISIGVSK 244
Query: 1017 -----VDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRLPWERAN--GGGDGER 859
+ + N ++V+N V S S +RLPW+R + +G++
Sbjct: 245 KEEKMISKGLNGVSLDETLSGDGENDEKVENFVYSGSGS---IRLPWKRESELSSEEGDK 301
Query: 858 LR-RRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESIHKKWKVDEVVK 682
R RRSNTELAE+ +P+ ELRRLRNV+LRM ER+KVG G+T+A+V +IH+KWK+DEVVK
Sbjct: 302 TRKRRSNTELAERMLPDHELRRLRNVSLRMLERIKVGVTGITQALVNTIHEKWKIDEVVK 361
Query: 681 LWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQSYAKVADTDSSH 502
L FE P +L+MKRTHEILE KTGG+VIWRSGSS+VLYRGMTY LPCVQ+YAK + T+S
Sbjct: 362 LKFEEPFSLNMKRTHEILESKTGGLVIWRSGSSVVLYRGMTYNLPCVQTYAKQSQTNSH- 420
Query: 501 KTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSE-----ILDVDSFLDQLGP 337
Q SE + +D+ N R + + + S+ + D++ LD+LGP
Sbjct: 421 -MMQHSENATSDSMHNVGVKDVSRTTDFPSLESAEYLKDLSQQELMALNDLNHLLDELGP 479
Query: 336 RYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRRLARTMSPHFA 157
R++DW G PLPVDAD+LP VVPGY PFRLL Y +P L++++MT RRLART+ PHFA
Sbjct: 480 RFKDWIGREPLPVDADLLPSVVPGYKTPFRLLPYGFRPCLRDKDMTKYRRLARTVPPHFA 539
Query: 156 LGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGVL 1
LGRNR+ +GLA AM+KLWEKSAIAKIAIKRGV NT NERMAEE+K+LTGG L
Sbjct: 540 LGRNRELQGLANAMMKLWEKSAIAKIAIKRGVQNTCNERMAEELKRLTGGTL 591
>ref|XP_010238097.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Brachypodium distachyon]
gi|944054332|gb|KQJ89970.1| hypothetical protein
BRADI_4g28800 [Brachypodium distachyon]
gi|944054333|gb|KQJ89971.1| hypothetical protein
BRADI_4g28800 [Brachypodium distachyon]
gi|944054334|gb|KQJ89972.1| hypothetical protein
BRADI_4g28800 [Brachypodium distachyon]
Length = 962
Score = 395 bits (1015), Expect = e-107
Identities = 213/359 (59%), Positives = 255/359 (71%), Gaps = 1/359 (0%)
Frame = -3
Query: 1074 GQNVSKFDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRLP 895
G D ++VSSIV L+N +E D V L S V LP
Sbjct: 275 GSRGGGIDRSIRRSSVSSIVSTLRNSMEESGPNATIGCSHEE-DFVQKLGS-----VLLP 328
Query: 894 WERANGGG-DGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVES 718
WER + DG R RSNTELAEKTIPE ELRRLR+ ALRMKERM++G GVT+AIV+S
Sbjct: 329 WEREDDDAFDGVRQGNRSNTELAEKTIPEPELRRLRDAALRMKERMRIGPGGVTQAIVKS 388
Query: 717 IHKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQ 538
IH KW VDEVVK+ FEGPP+L+MKRTHEILE +TGG VIWRSG SIVLYRGM Y L CVQ
Sbjct: 389 IHSKWSVDEVVKMRFEGPPSLNMKRTHEILEDRTGGTVIWRSGRSIVLYRGMNYNLRCVQ 448
Query: 537 SYAKVADTDSSHKTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSEILDVDS 358
SYAK+A+ DSS K S + + N + V + + + ++S ++E D+DS
Sbjct: 449 SYAKIAEVDSSKKVSDVSTVVPSCVEHNLQKSSADGVNRSTSIVSSS--QGATETFDIDS 506
Query: 357 FLDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRRLAR 178
FLDQLGPRY+DWSG +P+PVDAD+LPGVVP Y PPFR L Y+ K +L+++EMT+LRRLAR
Sbjct: 507 FLDQLGPRYKDWSGRSPIPVDADLLPGVVPDYKPPFRQLPYRTKLSLRDKEMTALRRLAR 566
Query: 177 TMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGVL 1
+PHFALGRNR+H+GLA A+VKLWEKS I KIAIKRGVPNT N+RMAEEIKKLTGGVL
Sbjct: 567 QTAPHFALGRNREHQGLASAIVKLWEKSTIVKIAIKRGVPNTCNDRMAEEIKKLTGGVL 625
>gb|EMS55813.1| Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Triticum urartu]
Length = 913
Score = 394 bits (1012), Expect = e-106
Identities = 215/381 (56%), Positives = 260/381 (68%), Gaps = 19/381 (4%)
Frame = -3
Query: 1086 IESLGQNVSKFDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVL 907
+E S FD ++VSSIV+ L+N D V L S
Sbjct: 267 LEDQSSTGSGFDRSIRRSSVSSIVNTLRNSMEESATIGSSEGE----DFVQKLGS----- 317
Query: 906 VRLPWERANGGG-DGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEA 730
V LPWER G DG++ R SNT+LAE+TIPE ELRRLR+ ALRMKERM+VG GVT A
Sbjct: 318 VLLPWEREEGNAFDGDKRGRHSNTKLAERTIPEPELRRLRDAALRMKERMRVGPGGVTHA 377
Query: 729 IVESIHKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKL 550
IVE+IH KWKVDEVVK+ FEGPP+L+MKRTHEILE +TGG VIWRSG SIVLYRGM Y L
Sbjct: 378 IVENIHSKWKVDEVVKMRFEGPPSLNMKRTHEILEDRTGGTVIWRSGRSIVLYRGMNYNL 437
Query: 549 PCVQSYAKVADTDSSH------------------KTFQSSEMSANDAARNKATNGFVRVL 424
CVQSYAK+A+ DSS K ++ RN + V
Sbjct: 438 RCVQSYAKIAEVDSSENAGDAIGVVPSSEEHDLQKPTVEHDLQKPVVERNSQKSSAEDVK 497
Query: 423 KPSDVGTTSFANSSSEILDVDSFLDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRL 244
+ + V +F+ ++E D+DSFLDQLGPRY+DWSG +P+PVDAD+LPG+VPGY PPFR
Sbjct: 498 RSTSV--MNFSQEATETFDIDSFLDQLGPRYKDWSGRSPVPVDADLLPGLVPGYKPPFRQ 555
Query: 243 LAYKVKPALKNREMTSLRRLARTMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRG 64
L Y+ K +LK++EMT+LRRLAR +PHFALGRNR+H+GLA A+VK+WEKS+I KIAIKRG
Sbjct: 556 LPYRTKISLKDKEMTALRRLARQTAPHFALGRNREHQGLAAAIVKVWEKSSIVKIAIKRG 615
Query: 63 VPNTHNERMAEEIKKLTGGVL 1
VPNT N+RMAEEIKKLTGGVL
Sbjct: 616 VPNTCNDRMAEEIKKLTGGVL 636
>ref|XP_010090056.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis] gi|587848594|gb|EXB38853.1| Chloroplastic
group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 859
Score = 392 bits (1006), Expect = e-106
Identities = 224/477 (46%), Positives = 294/477 (61%), Gaps = 9/477 (1%)
Frame = -3
Query: 1404 KRKKKPRPSFYDQTIERWSLRISSPRSRFPWQEQPAAETRKKNDDSRDTHLNSGLDFENP 1225
K+K+KP+PSF++Q E+WS +I S R +FPWQE+ + + ++ D+ + + +D +
Sbjct: 73 KKKRKPKPSFFEQIQEKWSAKIGSTREKFPWQEESSQD--EQEGDNEEEERETEIDVKES 130
Query: 1224 ESDFEGRSKGESFGRNGPWVPLGMQRGAAPWAHGGKLREGLEFGGKIESLGQNVSKFDEE 1045
SD SFG V +APWAHG K F + S + + K D
Sbjct: 131 ASD------SVSFGGKNGVV-------SAPWAHGTK-----PFKPHVVSEPETLEKSDNG 172
Query: 1044 RPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRLPWERANGG--- 874
+ DE+ D+V+ S+ LPW++A
Sbjct: 173 DFQREFDVGRDEISEEESEISNNVMNGFSLDDVEESSDYKSND-----LPWKKAGKAESR 227
Query: 873 -GDGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESIHKKWKV 697
G+ +RRSNT +AEKT+PE EL+RLRNV+LRM ER KVGA G+T+A+V+SIH+KWK+
Sbjct: 228 EGEKAAAKRRSNTAMAEKTLPEHELKRLRNVSLRMLERRKVGARGITQALVDSIHEKWKL 287
Query: 696 DEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQSYAKVAD 517
DEVVKL FE P +L+M+RTHEILE KTGG+VIWRSGSS+VLYRGMTY L CVQSY K
Sbjct: 288 DEVVKLKFEEPLSLNMRRTHEILESKTGGLVIWRSGSSVVLYRGMTYNLLCVQSYTKENQ 347
Query: 516 TDSSHKTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSE-----ILDVDSFL 352
+DS + E +D +K +R ++ S + SE + D++ L
Sbjct: 348 SDSMK--LPALEDGKSDIVHDKQVKVSIRTMESSTPISVKKVKGLSEGETMQLNDLNQLL 405
Query: 351 DQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRRLARTM 172
D+LGPR+ DW G PLPVDAD+LP VVP Y PFR+L Y VK + N+EMT LRR AR +
Sbjct: 406 DELGPRFTDWLGREPLPVDADLLPPVVPDYRTPFRILPYGVKRCVGNKEMTKLRRTARMI 465
Query: 171 SPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGVL 1
PHFALGRNR+ +GLA+AMV+LWEKSAIAKIAIKRGV NT NERMAEE+K+LTGG L
Sbjct: 466 PPHFALGRNRELQGLAKAMVRLWEKSAIAKIAIKRGVQNTCNERMAEELKRLTGGTL 522
>gb|EMT30138.1| Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Aegilops tauschii]
Length = 1128
Score = 391 bits (1004), Expect = e-106
Identities = 213/373 (57%), Positives = 256/373 (68%), Gaps = 21/373 (5%)
Frame = -3
Query: 1056 FDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRLPWERANG 877
FD ++VSSIV+ L+N D V L S V LPWER G
Sbjct: 542 FDRNMRRSSVSSIVNTLRNSMEESATIGSSEGE----DFVQKLGS-----VLLPWEREEG 592
Query: 876 GG-DGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESIHKKWK 700
DG+ R SNT+LAE+TIPE ELRRLR+ ALRMKERM+VG GVT AIVESIH KWK
Sbjct: 593 NAFDGDNRGRHSNTKLAERTIPEPELRRLRDAALRMKERMRVGPGGVTHAIVESIHSKWK 652
Query: 699 VDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQSYAKVA 520
VDEVVK+ FEGPP+L+MKRTHEILE +TGG VIWRSG SIVLYRGM Y L CVQSYAK+A
Sbjct: 653 VDEVVKMRFEGPPSLNMKRTHEILEDRTGGTVIWRSGRSIVLYRGMNYNLRCVQSYAKIA 712
Query: 519 DTDSSHKTFQSSEMSANDAARN--------------------KATNGFVRVLKPSDVGTT 400
+ DSS + + + N K++ V+ LK
Sbjct: 713 EVDSSENAGDAIGVVPSSEEHNLQKPTVEHDLQKPIVERNSQKSSADDVKRLK----SIM 768
Query: 399 SFANSSSEILDVDSFLDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPA 220
+F+ ++E D+DSFLDQLGPRY+DWSG +P+PVDAD+LPG+VPGY PPFR L Y+ K +
Sbjct: 769 NFSQEATETFDIDSFLDQLGPRYKDWSGRSPIPVDADLLPGLVPGYKPPFRQLPYRTKIS 828
Query: 219 LKNREMTSLRRLARTMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNER 40
LK++EMT+LRRLAR +PHFALGRNR+H+GLA A+VK+WEKS+ KIAIKRGVPNT N+R
Sbjct: 829 LKDKEMTALRRLARQTAPHFALGRNREHQGLAAAIVKVWEKSSTVKIAIKRGVPNTCNDR 888
Query: 39 MAEEIKKLTGGVL 1
MAEEIKKLTGGVL
Sbjct: 889 MAEEIKKLTGGVL 901
>ref|XP_008450865.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Cucumis melo]
gi|659099970|ref|XP_008450866.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1, chloroplastic
[Cucumis melo]
Length = 844
Score = 390 bits (1001), Expect = e-105
Identities = 222/491 (45%), Positives = 300/491 (61%), Gaps = 23/491 (4%)
Frame = -3
Query: 1404 KRKKKPRPSFYDQTIERWSLRISSPRSRFPWQEQPAAETRKKNDDSRDTHLNSGLDFENP 1225
K+K+KPRPSF +Q +WS + S FPWQ+Q K++++ + E
Sbjct: 71 KKKRKPRPSFLEQIRHKWSTKPISSTHTFPWQQQEQDRQHKQDEEEEEEE-------EEE 123
Query: 1224 ESDFEGRSKGESFGRNGPWV--PLGMQRGAAPWAHGGKLR-EGLEF------GGKIESLG 1072
E + S + V P+ + +APWAHG + R + +F G I +
Sbjct: 124 EEEEVANQTSVSIRESTTDVTQPVQTRSISAPWAHGSQSRNDQFDFKPKTPNGEVINEMS 183
Query: 1071 QNVSKFDEERPETTVS-------SIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSE 913
+ + R +T+S S DE + + + V+ ++D
Sbjct: 184 KISTDDTSNRNASTISIDEISDDSSEDEAEIDTVVLPVTEKRSLLSKKFVHSVSSDNDDN 243
Query: 912 VLVRLPWERA-NGGGDGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVT 736
V LPW+R + + +RRS T LAE+ +PE ELRRLRN++LRM ER++VG AG+T
Sbjct: 244 GRVDLPWKREPQSDSEVDAGQRRSKTLLAEQMLPEHELRRLRNISLRMVERIEVGVAGIT 303
Query: 735 EAIVESIHKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTY 556
+ +++SIH+KWKVDEVVKL FEGP T++MKR HE LE KTGG+VIWRSGS IVLYRGMTY
Sbjct: 304 QELLDSIHEKWKVDEVVKLKFEGPLTVNMKRAHEKLENKTGGLVIWRSGSLIVLYRGMTY 363
Query: 555 KLPCVQSYAKVADTDSSHKTFQ-SSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSS 379
LPCVQSYAK + KT S+ + ++D RN+ ++ V + G + + S
Sbjct: 364 HLPCVQSYAK--QNQARSKTLDGSNNVESDDTTRNEKSHTTVGTMSTIVSGASKHTKTLS 421
Query: 378 -----EILDVDSFLDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALK 214
E+ D++ LD++GPR++DWSGC P+PVDAD+LPG+VPGY PP R+L Y V+ L+
Sbjct: 422 KKELMELSDLNHLLDEIGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRILPYGVRHCLR 481
Query: 213 NREMTSLRRLARTMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMA 34
N+E+T RRLAR M PHFALGRNRQ +GLA AMVKLWEK AIAKIAIKRGV NT NERMA
Sbjct: 482 NKEVTVFRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMA 541
Query: 33 EEIKKLTGGVL 1
EE++ LTGG L
Sbjct: 542 EELRILTGGTL 552
>ref|XP_008652616.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X1 [Zea mays]
Length = 969
Score = 389 bits (999), Expect = e-105
Identities = 206/357 (57%), Positives = 253/357 (70%), Gaps = 3/357 (0%)
Frame = -3
Query: 1062 SKFDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRLPWERA 883
S+FD +++V++IV L+N E D V L LPWER
Sbjct: 279 SRFDRSMMQSSVNTIVKTLRNSMEESDPNATVELSNAE-DFVQKLGP-----ALLPWERE 332
Query: 882 NGGGD---GERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESIH 712
+ G R RRSNTELAE++IPE ELRRLR+ ALRMKER+KVG GVT+ IVESIH
Sbjct: 333 EEDDEAFSGGRAVRRSNTELAERSIPEPELRRLRDTALRMKERIKVGPGGVTQDIVESIH 392
Query: 711 KKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQSY 532
+KWKVDEVVK+ FEGPP+L+MKRTH++LE +TGG+VIWRSG S+VLYRGM Y CVQSY
Sbjct: 393 RKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGVVIWRSGRSVVLYRGMNYNFQCVQSY 452
Query: 531 AKVADTDSSHKTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSEILDVDSFL 352
AK + DS ++ + N + + + G +F+ SSE D+D+FL
Sbjct: 453 AKFIEIDSGKGVSDANSAVLSHDGHNLQASRADGMKSLTSTG--NFSLESSETFDIDNFL 510
Query: 351 DQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRRLARTM 172
DQLGPRY+DWSG P+PVDAD+LPGVV GY PPFR+L YK+K L+++EMT+LRRLAR
Sbjct: 511 DQLGPRYKDWSGRGPIPVDADLLPGVVHGYKPPFRVLPYKIKSTLRDKEMTTLRRLARQT 570
Query: 171 SPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGVL 1
+PHFALGRNR+H+GLA AMVKLWEKSAIAKIAIKRG+PNT N+RMAEEIKKLTGGVL
Sbjct: 571 APHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGIPNTCNDRMAEEIKKLTGGVL 627
>ref|XP_008652617.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Zea mays]
gi|414885161|tpg|DAA61175.1| TPA: hypothetical protein
ZEAMMB73_652631 [Zea mays]
Length = 964
Score = 389 bits (999), Expect = e-105
Identities = 206/357 (57%), Positives = 253/357 (70%), Gaps = 3/357 (0%)
Frame = -3
Query: 1062 SKFDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRLPWERA 883
S+FD +++V++IV L+N E D V L LPWER
Sbjct: 279 SRFDRSMMQSSVNTIVKTLRNSMEESDPNATVELSNAE-DFVQKLGP-----ALLPWERE 332
Query: 882 NGGGD---GERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESIH 712
+ G R RRSNTELAE++IPE ELRRLR+ ALRMKER+KVG GVT+ IVESIH
Sbjct: 333 EEDDEAFSGGRAVRRSNTELAERSIPEPELRRLRDTALRMKERIKVGPGGVTQDIVESIH 392
Query: 711 KKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQSY 532
+KWKVDEVVK+ FEGPP+L+MKRTH++LE +TGG+VIWRSG S+VLYRGM Y CVQSY
Sbjct: 393 RKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGVVIWRSGRSVVLYRGMNYNFQCVQSY 452
Query: 531 AKVADTDSSHKTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSEILDVDSFL 352
AK + DS ++ + N + + + G +F+ SSE D+D+FL
Sbjct: 453 AKFIEIDSGKGVSDANSAVLSHDGHNLQASRADGMKSLTSTG--NFSLESSETFDIDNFL 510
Query: 351 DQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRRLARTM 172
DQLGPRY+DWSG P+PVDAD+LPGVV GY PPFR+L YK+K L+++EMT+LRRLAR
Sbjct: 511 DQLGPRYKDWSGRGPIPVDADLLPGVVHGYKPPFRVLPYKIKSTLRDKEMTTLRRLARQT 570
Query: 171 SPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGVL 1
+PHFALGRNR+H+GLA AMVKLWEKSAIAKIAIKRG+PNT N+RMAEEIKKLTGGVL
Sbjct: 571 APHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGIPNTCNDRMAEEIKKLTGGVL 627
>ref|XP_012449426.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X1 [Gossypium raimondii]
Length = 883
Score = 387 bits (995), Expect = e-104
Identities = 221/482 (45%), Positives = 298/482 (61%), Gaps = 14/482 (2%)
Frame = -3
Query: 1404 KRKKKPRPSFYDQTIERWSLR-ISSPRSRFPWQEQPAAETRKKNDDSRDTHLNSGLDFEN 1228
K+K+KP+PSF DQ ++WS + I S R + PWQE+ E +++ + + FE
Sbjct: 58 KKKRKPKPSFLDQIKDKWSQKPIISTREKLPWQEKEELEEQEEVEKEQT--------FEA 109
Query: 1227 PESDFEGRSKGESFGRNGPWVPLGMQRGAAPWAHGGKLRE--------GLEFGGKIESLG 1072
S+ E + +PL Q AAPW+HG K E EF +IE
Sbjct: 110 TASETESDEDPRVEVSDPVSIPLPSQVIAAPWSHGRKFNEPHFDFVPESPEFESQIEVSF 169
Query: 1071 QNVSKFDEERPETTVSSIVDE--LKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRL 898
N D ++DE N + ++ VV+ + EV
Sbjct: 170 ANEKPIDFVGDRIEKPELLDEEISFNKQKPILSAHKKIAAVEGINEVVSSRQNLEVSTSG 229
Query: 897 PWERANGGGDGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVES 718
E + GDG+R +++SNTE+AE+ IPE ELRRLRN+ALRM ER KVGAAG+T+A+VE
Sbjct: 230 SNEGGSIEGDGKRGKKKSNTEMAERMIPEHELRRLRNIALRMVERTKVGAAGITQALVEH 289
Query: 717 IHKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQ 538
I+++WK+DEV+KL FE P +L+MKRTHE+LE++TGG+VIWRSG S+VLYRGM YKL CVQ
Sbjct: 290 IYERWKLDEVIKLKFEEPLSLNMKRTHEVLEKRTGGLVIWRSGGSVVLYRGMAYKLHCVQ 349
Query: 537 SYAKVADTDSSHK---TFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSEILD 367
SY+ D+S T + M D+ R + + + D+ ++ +
Sbjct: 350 SYSGQDQADTSALDVLTTNTETMVVKDSVRTEESFMLSSLEYLKDLSKEELM----DLCE 405
Query: 366 VDSFLDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRR 187
++ LD+LGPRY+DWSG PLPVDAD+LP VVPGY PFR L Y V+ LK+REMT+ RR
Sbjct: 406 LNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQLPFRRLPYGVRQCLKDREMTTFRR 465
Query: 186 LARTMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGG 7
LAR+M PHFALGRNR+ +GLA+A+VKLWE++AIAKIA+KRGV NT NERMAEE+K+LTGG
Sbjct: 466 LARSMPPHFALGRNRELQGLAQAIVKLWERTAIAKIAVKRGVENTRNERMAEELKRLTGG 525
Query: 6 VL 1
L
Sbjct: 526 TL 527
>gb|KJB65181.1| hypothetical protein B456_010G083500 [Gossypium raimondii]
Length = 875
Score = 387 bits (995), Expect = e-104
Identities = 221/482 (45%), Positives = 298/482 (61%), Gaps = 14/482 (2%)
Frame = -3
Query: 1404 KRKKKPRPSFYDQTIERWSLR-ISSPRSRFPWQEQPAAETRKKNDDSRDTHLNSGLDFEN 1228
K+K+KP+PSF DQ ++WS + I S R + PWQE+ E +++ + + FE
Sbjct: 58 KKKRKPKPSFLDQIKDKWSQKPIISTREKLPWQEKEELEEQEEVEKEQT--------FEA 109
Query: 1227 PESDFEGRSKGESFGRNGPWVPLGMQRGAAPWAHGGKLRE--------GLEFGGKIESLG 1072
S+ E + +PL Q AAPW+HG K E EF +IE
Sbjct: 110 TASETESDEDPRVEVSDPVSIPLPSQVIAAPWSHGRKFNEPHFDFVPESPEFESQIEVSF 169
Query: 1071 QNVSKFDEERPETTVSSIVDE--LKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRL 898
N D ++DE N + ++ VV+ + EV
Sbjct: 170 ANEKPIDFVGDRIEKPELLDEEISFNKQKPILSAHKKIAAVEGINEVVSSRQNLEVSTSG 229
Query: 897 PWERANGGGDGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVES 718
E + GDG+R +++SNTE+AE+ IPE ELRRLRN+ALRM ER KVGAAG+T+A+VE
Sbjct: 230 SNEGGSIEGDGKRGKKKSNTEMAERMIPEHELRRLRNIALRMVERTKVGAAGITQALVEH 289
Query: 717 IHKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQ 538
I+++WK+DEV+KL FE P +L+MKRTHE+LE++TGG+VIWRSG S+VLYRGM YKL CVQ
Sbjct: 290 IYERWKLDEVIKLKFEEPLSLNMKRTHEVLEKRTGGLVIWRSGGSVVLYRGMAYKLHCVQ 349
Query: 537 SYAKVADTDSSHK---TFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSEILD 367
SY+ D+S T + M D+ R + + + D+ ++ +
Sbjct: 350 SYSGQDQADTSALDVLTTNTETMVVKDSVRTEESFMLSSLEYLKDLSKEELM----DLCE 405
Query: 366 VDSFLDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRR 187
++ LD+LGPRY+DWSG PLPVDAD+LP VVPGY PFR L Y V+ LK+REMT+ RR
Sbjct: 406 LNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQLPFRRLPYGVRQCLKDREMTTFRR 465
Query: 186 LARTMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGG 7
LAR+M PHFALGRNR+ +GLA+A+VKLWE++AIAKIA+KRGV NT NERMAEE+K+LTGG
Sbjct: 466 LARSMPPHFALGRNRELQGLAQAIVKLWERTAIAKIAVKRGVENTRNERMAEELKRLTGG 525
Query: 6 VL 1
L
Sbjct: 526 TL 527
>ref|XP_012449427.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Gossypium raimondii]
gi|763798225|gb|KJB65180.1| hypothetical protein
B456_010G083500 [Gossypium raimondii]
Length = 867
Score = 387 bits (995), Expect = e-104
Identities = 221/482 (45%), Positives = 298/482 (61%), Gaps = 14/482 (2%)
Frame = -3
Query: 1404 KRKKKPRPSFYDQTIERWSLR-ISSPRSRFPWQEQPAAETRKKNDDSRDTHLNSGLDFEN 1228
K+K+KP+PSF DQ ++WS + I S R + PWQE+ E +++ + + FE
Sbjct: 58 KKKRKPKPSFLDQIKDKWSQKPIISTREKLPWQEKEELEEQEEVEKEQT--------FEA 109
Query: 1227 PESDFEGRSKGESFGRNGPWVPLGMQRGAAPWAHGGKLRE--------GLEFGGKIESLG 1072
S+ E + +PL Q AAPW+HG K E EF +IE
Sbjct: 110 TASETESDEDPRVEVSDPVSIPLPSQVIAAPWSHGRKFNEPHFDFVPESPEFESQIEVSF 169
Query: 1071 QNVSKFDEERPETTVSSIVDE--LKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRL 898
N D ++DE N + ++ VV+ + EV
Sbjct: 170 ANEKPIDFVGDRIEKPELLDEEISFNKQKPILSAHKKIAAVEGINEVVSSRQNLEVSTSG 229
Query: 897 PWERANGGGDGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVES 718
E + GDG+R +++SNTE+AE+ IPE ELRRLRN+ALRM ER KVGAAG+T+A+VE
Sbjct: 230 SNEGGSIEGDGKRGKKKSNTEMAERMIPEHELRRLRNIALRMVERTKVGAAGITQALVEH 289
Query: 717 IHKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQ 538
I+++WK+DEV+KL FE P +L+MKRTHE+LE++TGG+VIWRSG S+VLYRGM YKL CVQ
Sbjct: 290 IYERWKLDEVIKLKFEEPLSLNMKRTHEVLEKRTGGLVIWRSGGSVVLYRGMAYKLHCVQ 349
Query: 537 SYAKVADTDSSHK---TFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSEILD 367
SY+ D+S T + M D+ R + + + D+ ++ +
Sbjct: 350 SYSGQDQADTSALDVLTTNTETMVVKDSVRTEESFMLSSLEYLKDLSKEELM----DLCE 405
Query: 366 VDSFLDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRR 187
++ LD+LGPRY+DWSG PLPVDAD+LP VVPGY PFR L Y V+ LK+REMT+ RR
Sbjct: 406 LNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQLPFRRLPYGVRQCLKDREMTTFRR 465
Query: 186 LARTMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGG 7
LAR+M PHFALGRNR+ +GLA+A+VKLWE++AIAKIA+KRGV NT NERMAEE+K+LTGG
Sbjct: 466 LARSMPPHFALGRNRELQGLAQAIVKLWERTAIAKIAVKRGVENTRNERMAEELKRLTGG 525
Query: 6 VL 1
L
Sbjct: 526 TL 527
>ref|XP_009799178.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Nicotiana sylvestris]
Length = 827
Score = 387 bits (995), Expect = e-104
Identities = 232/489 (47%), Positives = 296/489 (60%), Gaps = 7/489 (1%)
Frame = -3
Query: 1446 LHSSNNGNSSSIDKKRKKKPRPSFYDQTIERWSLRISSPRSRFPWQEQPAAETRKKNDDS 1267
+HS ++ K+K+KPRPSF +Q ++WS++ +S R +FPWQE + + +
Sbjct: 55 IHSDKENQTNQT--KKKQKPRPSFLEQVQDKWSVKTTSLREKFPWQELNSVSIEEVAE-- 110
Query: 1266 RDTHLNSGLDFENPESDFEGRSKGESFGRNGPWVPLGMQRGAAPWAHGGKLREGLEFGGK 1087
+D + ENP + E S G N APW HG + ++ +
Sbjct: 111 QDLLSSVSKTEENPVVN-ESVSSGSRIKVN-----------LAPWVHGNQPKKSQLDSFE 158
Query: 1086 IESLGQNVSKFDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDN-VVALNSDSEV 910
+ +N + + E + S DE D + NSD
Sbjct: 159 ARNFEKNANWENNVSEELDIESGKDEKDIKLETKVSHRYEVQSSSNFDKGITYANSD--- 215
Query: 909 LVRLPW--ERANGGGDGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVT 736
RLPW ER G G++LR+ SNTE+AEK IPE +L++LRN ALRM ER+KVG+AGVT
Sbjct: 216 --RLPWQGERDVGPASGDKLRK-SNTEMAEKMIPEPQLKKLRNAALRMVERIKVGSAGVT 272
Query: 735 EAIVESIHKKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTY 556
+ +V+SIH+KWKVDE+VKL FEGPP+ +MKRTHEILE +TGG+VIWRSGSSIVLYRG+ Y
Sbjct: 273 QELVDSIHEKWKVDEIVKLRFEGPPSHNMKRTHEILEHRTGGLVIWRSGSSIVLYRGIPY 332
Query: 555 KLPCVQSYAKVADTDSSHKTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFAN-SSS 379
KLPCVQS+ D SE S ND N + G + + ++ F+N S +
Sbjct: 333 KLPCVQSFTTRNDD------IDESESSKND---NGQSFGVKSLNEATERPRNGFSNLSGA 383
Query: 378 EILDVDSF---LDQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNR 208
EI D+ LD++GPR++DWSG PLPVDADMLP VVPGY PPFR L Y K LKN+
Sbjct: 384 EIRDLSELNMLLDEVGPRFKDWSGREPLPVDADMLPAVVPGYRPPFRRLPYGAKLNLKNK 443
Query: 207 EMTSLRRLARTMSPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEE 28
EMT LRR AR M PHFALGRNR+ +GLA AM KLW SAIAKIAIKRGV NT NERMAEE
Sbjct: 444 EMTYLRRTARIMPPHFALGRNRELQGLAAAMAKLWRGSAIAKIAIKRGVQNTSNERMAEE 503
Query: 27 IKKLTGGVL 1
+K LTGG L
Sbjct: 504 LKVLTGGTL 512
>ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
gi|462399326|gb|EMJ04994.1| hypothetical protein
PRUPE_ppa001111mg [Prunus persica]
Length = 906
Score = 387 bits (995), Expect = e-104
Identities = 227/524 (43%), Positives = 306/524 (58%), Gaps = 56/524 (10%)
Frame = -3
Query: 1404 KRKKKPRPSFYDQTIERWSLRISSPRSRFPWQEQPAAETRKKND----DSRDTHLNSGLD 1237
++K+KP+PSF++Q ++WS++++SPR +FPWQ+Q +K + D + +N +
Sbjct: 72 RKKRKPKPSFFEQIQDKWSMKVNSPRDKFPWQKQNELVQEEKEEVEEEDEEEEPVNQKVS 131
Query: 1236 FENPESDFEGRSKGESFGRNGPWVPLGMQRGAAPWAHG---------------------G 1120
F P APWAHG G
Sbjct: 132 FSLPNRIVY-----------------------APWAHGSKRITPQVDSEPETSQHSGAQG 168
Query: 1119 KLREGLEFGGKIESLGQNVS-------KFDEERP-------ETTVSSI---------VDE 1009
K +G +I++ V +FD R E + SI + +
Sbjct: 169 KNLDGFAGHSEIDTTSGAVKNEKSFERRFDSNRKLERERVGEIGIISIGVSKKEEKMISK 228
Query: 1008 LKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRLPWERAN--GGGDGERLR-RRSNT 838
N ++V+N V S S +RLPW+R + +G++ R RRSNT
Sbjct: 229 GLNGISLNETLSGDGENDEKVENFVYSGSGS---IRLPWKRESELSSEEGDKTRKRRSNT 285
Query: 837 ELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESIHKKWKVDEVVKLWFEGPPT 658
ELAE+ +P+ ELRRLRNV+LRM ER+KVG G+T+A+V +IH+KWK+DEVVKL FE P +
Sbjct: 286 ELAERMLPDHELRRLRNVSLRMLERIKVGVTGITQALVNTIHEKWKIDEVVKLKFEEPFS 345
Query: 657 LHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQSYAKVADTDSSHKTFQSSEM 478
L+MKRTHEILE KTGG+VIWRSGSS+VLYRGMTY LPCVQ+YAK + T+S Q SE
Sbjct: 346 LNMKRTHEILESKTGGLVIWRSGSSVVLYRGMTYNLPCVQTYAKHSQTNS--HMLQHSEN 403
Query: 477 SANDAARNKATNGFVRVLKPSDVGTTSFANSSSE-----ILDVDSFLDQLGPRYEDWSGC 313
+ +D+ N R + + + S+ + D++ LD+LGPR++DW G
Sbjct: 404 ATSDSMHNVGVKDVSRTTDFPSLESAEYLKDLSQRELMALNDLNHLLDELGPRFKDWIGR 463
Query: 312 NPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRRLARTMSPHFALGRNRQHE 133
PLPVDAD+LP VV GY PFRLL Y +P L++++MT RRLART+ PHFALG NR+ +
Sbjct: 464 EPLPVDADLLPSVVRGYKTPFRLLPYGFRPCLRDKDMTKYRRLARTVPPHFALGMNRELQ 523
Query: 132 GLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGVL 1
GLA AM+KLWEKSAIAKIAIKRGV NT NERMAEE+K+LTGG L
Sbjct: 524 GLANAMMKLWEKSAIAKIAIKRGVQNTCNERMAEELKRLTGGTL 567
>ref|XP_006661163.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Oryza brachyantha]
Length = 758
Score = 387 bits (994), Expect = e-104
Identities = 208/357 (58%), Positives = 251/357 (70%), Gaps = 5/357 (1%)
Frame = -3
Query: 1056 FDEERPETTVSSIVDELKNXXXXXXXXXXXXXXXDEVDNVVALNSDSEVLVRLPWER--- 886
FD + ++SSIV L+N + D V L V LPWER
Sbjct: 82 FDRGPRQRSISSIVSTLRNSMEESSRNAATEWPETQ-DFVQELGP-----VLLPWEREED 135
Query: 885 --ANGGGDGERLRRRSNTELAEKTIPEDELRRLRNVALRMKERMKVGAAGVTEAIVESIH 712
A+ G D R R+RSNTELAE+TIPE ELRRLR+VALRMKERM+VG GVT+ +VESIH
Sbjct: 136 KEASSGVD--RPRKRSNTELAERTIPEPELRRLRDVALRMKERMRVGPGGVTQVLVESIH 193
Query: 711 KKWKVDEVVKLWFEGPPTLHMKRTHEILERKTGGMVIWRSGSSIVLYRGMTYKLPCVQSY 532
+KW+VDEV KL FEGPP+L+MKRTH+ILE +TGG+VIWRSG S+VLYRGM Y L CVQSY
Sbjct: 194 QKWRVDEVAKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRSVVLYRGMNYNLRCVQSY 253
Query: 531 AKVADTDSSHKTFQSSEMSANDAARNKATNGFVRVLKPSDVGTTSFANSSSEILDVDSFL 352
K A+ +S + A +G+ + S + +E D+DSFL
Sbjct: 254 TKTAEVNSDIEPIHVEHKFQKSGANGLNHSGY----------SVSSSKKPTETFDIDSFL 303
Query: 351 DQLGPRYEDWSGCNPLPVDADMLPGVVPGYSPPFRLLAYKVKPALKNREMTSLRRLARTM 172
DQLGPRY+DWSG P+PVDAD+LPGVV GY+ PFRLL YKVK L+N+EMT+LRRLAR
Sbjct: 304 DQLGPRYKDWSGRGPIPVDADLLPGVVHGYNTPFRLLPYKVKSTLRNKEMTALRRLARQT 363
Query: 171 SPHFALGRNRQHEGLARAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGVL 1
+PHFALGRNR+H+GLA A+VKLWEKS+IAKIAIKRGVPNT N+RMAEE+KKLTGGVL
Sbjct: 364 TPHFALGRNREHQGLAAAIVKLWEKSSIAKIAIKRGVPNTCNDRMAEELKKLTGGVL 420