BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00013071
         (3014 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair ...   927   0.0  
ref|XP_010915313.1| PREDICTED: MMS19 nucleotide excision repair ...   910   0.0  
ref|XP_010915290.1| PREDICTED: MMS19 nucleotide excision repair ...   910   0.0  
ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair ...   821   0.0  
ref|XP_009416475.1| PREDICTED: MMS19 nucleotide excision repair ...   805   0.0  
emb|CBI36057.3| unnamed protein product [Vitis vinifera]              751   0.0  
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ...   721   0.0  
gb|KDO51789.1| hypothetical protein CISIN_1g001284mg [Citrus sin...   718   0.0  
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ...   717   0.0  
gb|KDO51790.1| hypothetical protein CISIN_1g001284mg [Citrus sin...   714   0.0  
ref|XP_006853692.2| PREDICTED: MMS19 nucleotide excision repair ...   709   0.0  
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr...   709   0.0  
gb|ERN15159.1| hypothetical protein AMTR_s00056p00136660 [Ambore...   709   0.0  
ref|XP_008228424.1| PREDICTED: MMS19 nucleotide excision repair ...   699   0.0  
ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prun...   690   0.0  
ref|XP_007024310.1| MMS19 nucleotide excision repair protein, pu...   677   0.0  
ref|XP_008380856.1| PREDICTED: uncharacterized protein LOC103443...   676   0.0  
ref|XP_009342537.1| PREDICTED: MMS19 nucleotide excision repair ...   674   0.0  
ref|XP_009342535.1| PREDICTED: MMS19 nucleotide excision repair ...   674   0.0  
ref|XP_010318526.1| PREDICTED: MMS19 nucleotide excision repair ...   672   0.0  

>ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Phoenix
            dactylifera]
          Length = 1153

 Score =  927 bits (2395), Expect = 0.0
 Identities = 508/916 (55%), Positives = 636/916 (69%), Gaps = 13/916 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLSRALM+AFCSTP+FEP AI            LAK+DSLKYL+NC+ HYG  RM KHA 
Sbjct: 244  DLSRALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQHYGTDRMIKHAG 303

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            AIWS LKDA+FN SP  T+ +S S++  + ES+E+QIAKEAL CL  AI  L+    +P 
Sbjct: 304  AIWSNLKDAIFNHSPHKTL-SSTSEAAGNTESEENQIAKEALICLQTAILHLDSLEKDPI 362

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +SLI++D+DIE  F  V  E + +GIS ES+RQLS++G+ILS+++K S   C+ VFQKFF
Sbjct: 363  LSLIVEDEDIEMKFGLVSNEGTCTGISIESRRQLSAVGNILSVSSKASMSGCTRVFQKFF 422

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQDLSPQVP- 2296
            P LMN+L VS S SS+ C  + +T S  LNFGALYLC++LLASCR+LT+ +QD SPQV  
Sbjct: 423  PHLMNILEVSASSSSYGCNTKNRTSS--LNFGALYLCIQLLASCRELTLTSQDFSPQVTT 480

Query: 2295 --DSWWYLLKDFSGPVTFALKSALVNTGTAA-----TGPEHMSCVVKGLQVLTTFPGHIS 2137
              D WW +L+ FSGP+  AL SALV  G++      TG EH    VKGLQVL  FPG   
Sbjct: 481  VQDIWWSMLQHFSGPLVHALGSALVAVGSSELVSNNTGHEHAIYEVKGLQVLAMFPGCYL 540

Query: 2136 PVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVE 1957
            P+SED+YE IL  L+S++T R +DT+LW+ +++AL++IG  IEK  D+ + +S+++ VVE
Sbjct: 541  PISEDVYEYILVILVSMVTERFEDTFLWKLSVKALIEIGSFIEKHHDSYRGISFNRIVVE 600

Query: 1956 RIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAA 1777
            RI SL   DD    LALKL+AISEIG  G D+MS VIR LEEAI S F    V G + AA
Sbjct: 601  RIVSLFQHDDSTMPLALKLDAISEIGTIGVDYMSRVIRLLEEAILSKFLAVCVEGCLEAA 660

Query: 1776 EILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMM 1597
            EILVPLLECYSNRVL WC+T G  D++A++FA  IW+ ME  T    D++ + +LD  MM
Sbjct: 661  EILVPLLECYSNRVLAWCYTSGNFDEVAMRFALCIWDQMESITIFDKDVKLKDLLDRVMM 720

Query: 1596 AMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXSIPDMSGLSCKDE 1417
             MKL+V  C EESQS +VRKAY++L STTF                   PD+  LS +DE
Sbjct: 721  TMKLLVWGCVEESQSLIVRKAYSVLLSTTFLSEESLSFSPSKLEGLQLTPDLVNLSWRDE 780

Query: 1416 WLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQ 1237
            W++SLFAS+V+AL PQTP+PDV  L  + T FLLKGHLPAAQALASM+NKW  N+ ++E 
Sbjct: 781  WIVSLFASVVMALLPQTPLPDVKLLSNMLTTFLLKGHLPAAQALASMVNKWHVNIDKSEV 840

Query: 1236 PSAYNLEETINVVLE-NLSAILSSSPLKECKIVNDTDDXXXXXXXXXF----QIHGVVGL 1072
             SAY L+E I ++LE +L +I SSS L +  ++N  +               Q + VVGL
Sbjct: 841  SSAYTLDEAIEMILERSLLSIQSSSNLGKSDLLNSGERMLSCLCLLNKNSSFQNNAVVGL 900

Query: 1071 AWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAAD 892
            AWIGK LLMRGHE+VKEIA LLLKYLLSN       +  D S   +G D ++ L  +AAD
Sbjct: 901  AWIGKGLLMRGHEKVKEIAMLLLKYLLSNPYKE---LHSDVSGSGDGLDVHTSLATSAAD 957

Query: 891  AFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHI 712
            AFH++LSDSEVCLNKKFHATIRPLYKQRF+SSMMPVLL         S R  L RA  H+
Sbjct: 958  AFHVILSDSEVCLNKKFHATIRPLYKQRFFSSMMPVLLSSIKQSRSLSMRVALCRAFAHV 1017

Query: 711  FSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVEN 532
             S+ PL  +VAEAKKI+P L++  ++ S D  NK++ Y+LLLVLSGILMD+NGKEAIVEN
Sbjct: 1018 ISDAPLAAVVAEAKKIVPSLMDSFAMLSEDVLNKDLIYSLLLVLSGILMDDNGKEAIVEN 1077

Query: 531  AXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKI 352
                         YPH MLVRETAIQCL AMS LPH RIYPMRPQVLRA++ +LDD+K+ 
Sbjct: 1078 INTVISHLIRLIFYPHMMLVRETAIQCLVAMSGLPHARIYPMRPQVLRAVSKALDDQKRA 1137

Query: 351  VRQEAVRCRQAWASIA 304
            VRQEAVRCRQAW S+A
Sbjct: 1138 VRQEAVRCRQAWVSMA 1153


>ref|XP_010915313.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Elaeis guineensis]
          Length = 1033

 Score =  910 bits (2353), Expect = 0.0
 Identities = 497/916 (54%), Positives = 625/916 (68%), Gaps = 13/916 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            +LS ALM+AFCSTP+FEP AI            LAK+DSLKYL+NC+ HYG  RM KHA 
Sbjct: 124  ELSMALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQHYGTDRMIKHAK 183

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            AIWS LKD + N SP  T+F S S+   ++ES+E+QIAKEAL CL  AI  L+     P 
Sbjct: 184  AIWSNLKDVILNHSPHKTLF-STSELAGNMESEENQIAKEALICLQTAILHLDSLEKNPI 242

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +S I++D+DIE  F  V  E + +GIS ES+R LS++G+ILS+++K S   C+ VFQKFF
Sbjct: 243  LSFIVEDEDIEMKFGLVSNEGTGTGISIESRRHLSAVGNILSVSSKASMSGCTRVFQKFF 302

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQDLSPQV-- 2299
            PRLMN+L +S S SS+ C     T S  LNFGALYLC++LLAS R+L + +QD SPQV  
Sbjct: 303  PRLMNILEISASSSSNGCNTNNGTSS--LNFGALYLCIQLLASFRELILTSQDFSPQVIT 360

Query: 2298 -PDSWWYLLKDFSGPVTFALKSALVNTGTAA-----TGPEHMSCVVKGLQVLTTFPGHIS 2137
              D WW +L+ FSGP+  AL SAL+   ++      TG EH    VKGLQVL TFPG   
Sbjct: 361  VQDGWWCMLQHFSGPLAHALGSALMGARSSELVNNNTGHEHAIYEVKGLQVLATFPGCYL 420

Query: 2136 PVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVE 1957
            P SED+YE IL   MS+ T R +D +LW+ +++AL++IG  IEK+ D+ + +S+++ VVE
Sbjct: 421  PTSEDVYEYILVIFMSIATERFEDAFLWKLSVKALIEIGSFIEKYHDSYRGISFNRIVVE 480

Query: 1956 RIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAA 1777
            RI SL   DD    LALKL+AISEIG  G D+MS VI+ LEEAI S F    V G + AA
Sbjct: 481  RIVSLFQQDDSTMPLALKLDAISEIGTIGVDYMSRVIKLLEEAILSKFLAVCVEGRLEAA 540

Query: 1776 EILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMM 1597
            EILVPLLECYSNRVL WC+T G  D++A+QFA  IWN ME  T    D + Q + D  M 
Sbjct: 541  EILVPLLECYSNRVLLWCYTSGNFDEVAMQFALCIWNQMESITIFDKDAKIQDLFDRMMT 600

Query: 1596 AMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXSIPDMSGLSCKDE 1417
             MKL+VG C EE+QS +VRKAY++L ST+F                   PD+  LS +DE
Sbjct: 601  TMKLLVGGCAEENQSLIVRKAYSVLLSTSFLSEESLPFSSSKLEGLQVTPDLVNLSWRDE 660

Query: 1416 WLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQ 1237
            W++SLFAS+VIAL PQTP+PDV  L+ + T FLLKGHLPAAQALASM+NKW  N+ ++E 
Sbjct: 661  WIVSLFASVVIALLPQTPLPDVKLLLNVLTTFLLKGHLPAAQALASMVNKWHVNIDKSEV 720

Query: 1236 PSAYNLEETINVVLE-NLSAILSSSPLKECKIVNDTDDXXXXXXXXXF----QIHGVVGL 1072
            P+AY L+E I ++LE +L ++ SSS L +  ++N  +               Q + VVGL
Sbjct: 721  PNAYTLDEAIEMILERSLLSVQSSSNLGKSDLLNKDERMLSCLCLLNNNSSFQSNAVVGL 780

Query: 1071 AWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAAD 892
            AWIGK LLMRGHE+VKEIA LLL+YLLSN       +  D S   +  D ++ L  +AAD
Sbjct: 781  AWIGKGLLMRGHEKVKEIAMLLLQYLLSNPYKE---LHSDASGSGDSLDVHTSLATSAAD 837

Query: 891  AFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHI 712
            AFH++LSDSEVCLNK FHA IRPLYKQRF+SSMMPVLL         S R  LYRA  H+
Sbjct: 838  AFHVILSDSEVCLNKNFHAMIRPLYKQRFFSSMMPVLLSSIKQSCSSSMRVALYRAFAHV 897

Query: 711  FSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVEN 532
             S+ PL  +VAEAKKI+P L++ L++ S D  NK++ Y+LLLVLSGILMD+NGKEAI+EN
Sbjct: 898  ISDAPLAAVVAEAKKILPSLMDSLAMLSEDVLNKDLIYSLLLVLSGILMDDNGKEAIIEN 957

Query: 531  AXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKI 352
                         YPH MLVRETAIQCL AMSALPH RIYPMRPQVLRA++ +LDDRK++
Sbjct: 958  INTVISDLIRLIFYPHMMLVRETAIQCLVAMSALPHARIYPMRPQVLRAVSKALDDRKRV 1017

Query: 351  VRQEAVRCRQAWASIA 304
            VRQEAVRCRQAW S+A
Sbjct: 1018 VRQEAVRCRQAWVSMA 1033


>ref|XP_010915290.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Elaeis guineensis] gi|743756137|ref|XP_010915298.1|
            PREDICTED: MMS19 nucleotide excision repair protein
            homolog isoform X1 [Elaeis guineensis]
            gi|743756139|ref|XP_010915305.1| PREDICTED: MMS19
            nucleotide excision repair protein homolog isoform X1
            [Elaeis guineensis]
          Length = 1078

 Score =  910 bits (2353), Expect = 0.0
 Identities = 497/916 (54%), Positives = 625/916 (68%), Gaps = 13/916 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            +LS ALM+AFCSTP+FEP AI            LAK+DSLKYL+NC+ HYG  RM KHA 
Sbjct: 169  ELSMALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQHYGTDRMIKHAK 228

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            AIWS LKD + N SP  T+F S S+   ++ES+E+QIAKEAL CL  AI  L+     P 
Sbjct: 229  AIWSNLKDVILNHSPHKTLF-STSELAGNMESEENQIAKEALICLQTAILHLDSLEKNPI 287

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +S I++D+DIE  F  V  E + +GIS ES+R LS++G+ILS+++K S   C+ VFQKFF
Sbjct: 288  LSFIVEDEDIEMKFGLVSNEGTGTGISIESRRHLSAVGNILSVSSKASMSGCTRVFQKFF 347

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQDLSPQV-- 2299
            PRLMN+L +S S SS+ C     T S  LNFGALYLC++LLAS R+L + +QD SPQV  
Sbjct: 348  PRLMNILEISASSSSNGCNTNNGTSS--LNFGALYLCIQLLASFRELILTSQDFSPQVIT 405

Query: 2298 -PDSWWYLLKDFSGPVTFALKSALVNTGTAA-----TGPEHMSCVVKGLQVLTTFPGHIS 2137
              D WW +L+ FSGP+  AL SAL+   ++      TG EH    VKGLQVL TFPG   
Sbjct: 406  VQDGWWCMLQHFSGPLAHALGSALMGARSSELVNNNTGHEHAIYEVKGLQVLATFPGCYL 465

Query: 2136 PVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVE 1957
            P SED+YE IL   MS+ T R +D +LW+ +++AL++IG  IEK+ D+ + +S+++ VVE
Sbjct: 466  PTSEDVYEYILVIFMSIATERFEDAFLWKLSVKALIEIGSFIEKYHDSYRGISFNRIVVE 525

Query: 1956 RIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAA 1777
            RI SL   DD    LALKL+AISEIG  G D+MS VI+ LEEAI S F    V G + AA
Sbjct: 526  RIVSLFQQDDSTMPLALKLDAISEIGTIGVDYMSRVIKLLEEAILSKFLAVCVEGRLEAA 585

Query: 1776 EILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMM 1597
            EILVPLLECYSNRVL WC+T G  D++A+QFA  IWN ME  T    D + Q + D  M 
Sbjct: 586  EILVPLLECYSNRVLLWCYTSGNFDEVAMQFALCIWNQMESITIFDKDAKIQDLFDRMMT 645

Query: 1596 AMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXSIPDMSGLSCKDE 1417
             MKL+VG C EE+QS +VRKAY++L ST+F                   PD+  LS +DE
Sbjct: 646  TMKLLVGGCAEENQSLIVRKAYSVLLSTSFLSEESLPFSSSKLEGLQVTPDLVNLSWRDE 705

Query: 1416 WLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQ 1237
            W++SLFAS+VIAL PQTP+PDV  L+ + T FLLKGHLPAAQALASM+NKW  N+ ++E 
Sbjct: 706  WIVSLFASVVIALLPQTPLPDVKLLLNVLTTFLLKGHLPAAQALASMVNKWHVNIDKSEV 765

Query: 1236 PSAYNLEETINVVLE-NLSAILSSSPLKECKIVNDTDDXXXXXXXXXF----QIHGVVGL 1072
            P+AY L+E I ++LE +L ++ SSS L +  ++N  +               Q + VVGL
Sbjct: 766  PNAYTLDEAIEMILERSLLSVQSSSNLGKSDLLNKDERMLSCLCLLNNNSSFQSNAVVGL 825

Query: 1071 AWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAAD 892
            AWIGK LLMRGHE+VKEIA LLL+YLLSN       +  D S   +  D ++ L  +AAD
Sbjct: 826  AWIGKGLLMRGHEKVKEIAMLLLQYLLSNPYKE---LHSDASGSGDSLDVHTSLATSAAD 882

Query: 891  AFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHI 712
            AFH++LSDSEVCLNK FHA IRPLYKQRF+SSMMPVLL         S R  LYRA  H+
Sbjct: 883  AFHVILSDSEVCLNKNFHAMIRPLYKQRFFSSMMPVLLSSIKQSCSSSMRVALYRAFAHV 942

Query: 711  FSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVEN 532
             S+ PL  +VAEAKKI+P L++ L++ S D  NK++ Y+LLLVLSGILMD+NGKEAI+EN
Sbjct: 943  ISDAPLAAVVAEAKKILPSLMDSLAMLSEDVLNKDLIYSLLLVLSGILMDDNGKEAIIEN 1002

Query: 531  AXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKI 352
                         YPH MLVRETAIQCL AMSALPH RIYPMRPQVLRA++ +LDDRK++
Sbjct: 1003 INTVISDLIRLIFYPHMMLVRETAIQCLVAMSALPHARIYPMRPQVLRAVSKALDDRKRV 1062

Query: 351  VRQEAVRCRQAWASIA 304
            VRQEAVRCRQAW S+A
Sbjct: 1063 VRQEAVRCRQAWVSMA 1078


>ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Nelumbo
            nucifera] gi|719979495|ref|XP_010249498.1| PREDICTED:
            MMS19 nucleotide excision repair protein homolog [Nelumbo
            nucifera]
          Length = 1160

 Score =  821 bits (2121), Expect = 0.0
 Identities = 447/923 (48%), Positives = 605/923 (65%), Gaps = 14/923 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLSRALM AF S+P FEP AI            LAK+DS +YLS+C+L YG  RM KHA 
Sbjct: 244  DLSRALMLAFSSSPLFEPFAIPLLLEKLSSSLPLAKVDSFRYLSHCVLKYGVDRMGKHAK 303

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            AIWS+LKDA+F  S QG +F+  S   + +  +E+ I KEAL CL   I Q    N   F
Sbjct: 304  AIWSSLKDAIFTFSLQGNIFSLASDLPDTMGFEENDITKEALICLEKVILQ----NDGIF 359

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +SLI+DD+D+E    SV +  SY+ +S ES+++L + G I+ ++ K S+  C  +F   F
Sbjct: 360  LSLIVDDEDVEMILRSVTISNSYNSLSVESKQKLLAFGRIIVVSAKISSSSCDRIFHFLF 419

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFS-NILNFGALYLCVELLASCRDLTMVAQDLSPQ-- 2302
            PRLM++LG+S S  S  CI      S   LNFGA+YLC ELLA+CRDL + ++D++PQ  
Sbjct: 420  PRLMDILGLSSSSLSLECIPYGSPVSFGQLNFGAIYLCTELLAACRDLIVGSEDIAPQSV 479

Query: 2301 -VPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVSE 2125
             +  SW  LL+ FSGP+T  L S+LV +        ++   VKGL+ L TFPG   P+S+
Sbjct: 480  LMQVSWCCLLQRFSGPLTTFLSSSLVTSMKQENCDANIYSGVKGLRTLATFPGWFLPISK 539

Query: 2124 DIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIAS 1945
             I+E+IL   MS++TA  ++T LW+ +L+ALVQIG   EKF D+++  SY   VV +I S
Sbjct: 540  SIFENILTVFMSILTAGCEETLLWKLSLKALVQIGTFTEKFHDSERATSYMNIVVGKIVS 599

Query: 1944 LLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILV 1765
             +SLDD     +LKL+AI+EIG +G  FM  VI+GLEEAI ++F ++   GN+ + E+L+
Sbjct: 600  SISLDDSSMPYSLKLDAIAEIGGSGMHFMLKVIQGLEEAISANFFEASSKGNLKSVEVLI 659

Query: 1764 PLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMKL 1585
            PLLEC+S +VLPW H     + I   F  NIWN ME +T  ++ ++   +LD TMM M+ 
Sbjct: 660  PLLECFSKKVLPWFHKTSLFEDIVFHFVINIWNQMEANTTFNIGIKANELLDVTMMVMRQ 719

Query: 1584 VVGYCTEESQSTLVRKAYNILSSTTF--PQXXXXXXXXXXXXXXXSIPDMSGLSCKDEWL 1411
             V  C+E++Q  +V+KAYNILSS+     +                  ++   SC+DEWL
Sbjct: 720  AVADCSEKNQGLIVQKAYNILSSSASFSLKEPMPLSIPLKTEGLQLTQNLQDFSCRDEWL 779

Query: 1410 ISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPS 1231
            ISLFAS+++ALRPQT +PDV  ++ LF   +LKGH+PAAQAL S+INK P  +   E   
Sbjct: 780  ISLFASVIMALRPQTCLPDVRVVLELFMSVVLKGHVPAAQALGSIINKLPATIDSVEVSR 839

Query: 1230 AYNLEETINVVLE-NLSAILSSSPLKECKIV-----NDTDDXXXXXXXXXFQIHGVVGLA 1069
            A  LEE + ++ + NL ++  +S  ++C ++     N TD           Q + +VGLA
Sbjct: 840  ACTLEEAMVIISKMNLWSVNGNSSFRKCNVICKSVENLTDLDISANNNAMVQTNVLVGLA 899

Query: 1068 WIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVN--GQDSNSHLTRAAA 895
            WIGK LLMRGHE+VK+I   LL+ LLS  N  T L+P+      N  GQD +  + ++AA
Sbjct: 900  WIGKGLLMRGHEKVKDITMTLLRCLLSTIN--TELLPIQHGLSGNDSGQDMHPLVMKSAA 957

Query: 894  DAFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGH 715
            DAFHIL+SDSE+CLNK+FHAT+RPLYKQ F+S MMP+LL          TR+ LYRA GH
Sbjct: 958  DAFHILMSDSEICLNKRFHATVRPLYKQHFFSIMMPILLSSITGSDSSITRSFLYRAFGH 1017

Query: 714  IFSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVE 535
            + SNTPLV ++ E KK+IP LL+ L++SS+D  +K++TY+LLLV+SGI+MDENG+EA+ E
Sbjct: 1018 VISNTPLVAVITECKKLIPVLLDSLAVSSVDILDKDLTYSLLLVISGIIMDENGREAVTE 1077

Query: 534  NAXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKK 355
            NA           SYPH MLVRETAIQCL AMS LPH RIYPMR QVLRA++ +LDD K+
Sbjct: 1078 NAHIIINCLVGLLSYPHMMLVRETAIQCLVAMSGLPHVRIYPMRTQVLRAISKALDDPKR 1137

Query: 354  IVRQEAVRCRQAWASIASRSLHF 286
            +VRQEAVRCRQAWAS+ASRSL+F
Sbjct: 1138 VVRQEAVRCRQAWASMASRSLYF 1160


>ref|XP_009416475.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Musa
            acuminata subsp. malaccensis]
          Length = 1122

 Score =  805 bits (2079), Expect = 0.0
 Identities = 451/902 (50%), Positives = 591/902 (65%), Gaps = 3/902 (0%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLS+ALM+AF S+P FEP  I             AK+DSLKYL++C+ HY A ++ KH+ 
Sbjct: 244  DLSKALMDAFSSSPLFEPFVIPLLLEKLSSSLPSAKLDSLKYLNSCLRHYEADKVVKHSQ 303

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
             IWS LKD +FNLSP  +  ++   S  D++S+ +QIA EALNCL  AIS LN  + + F
Sbjct: 304  VIWSNLKDVIFNLSPHRSSLSTYG-SNGDMDSEVNQIADEALNCLQTAISHLNFPDQDSF 362

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            + LI+DD+DI   F SV   + YSG S E   QLS+LGSILSIA+K S  CC+ VFQKFF
Sbjct: 363  LCLIIDDEDIGTRFWSVTSIKKYSGTSTEIHCQLSALGSILSIASKVSIYCCTKVFQKFF 422

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQDLSPQV-- 2299
              LM++LGVS    S  C+ +  T S+ LNFGALYL +ELL SCR+LT+ +++ SP+V  
Sbjct: 423  SCLMDILGVSGKHPSKLCVTDHNTCSDGLNFGALYLSMELLTSCRELTLSSKEFSPEVIS 482

Query: 2298 -PDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVSED 2122
             P S +Y+LK+ S  +  AL S L          EH+ C VKGLQVL TFP   SPVSE 
Sbjct: 483  EPRSSFYVLKNISRELCDALGSIL----ETPESEEHVYCAVKGLQVLATFPEIYSPVSEA 538

Query: 2121 IYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIASL 1942
             YEDIL  LMS+I  RS +TYLW  +L+ALVQIGL IE   D+ K  SY+K V++RI S+
Sbjct: 539  TYEDILVMLMSIIARRSKETYLWELSLKALVQIGLWIENAHDSAKATSYNKLVIQRIVSM 598

Query: 1941 LSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILVP 1762
            L  +D   SL+LKL AISEI   G  ++  +++  EEAI S+    +  GN+ ++++LVP
Sbjct: 599  LQSNDSTISLSLKLVAISEISSIGL-YLLRIVQAFEEAIVSNLRACF-EGNLKSSDVLVP 656

Query: 1761 LLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMKLV 1582
            LL+CYSN+VLP CHT G  + IA+Q A +IWN +E        +  + VLD  MM MK +
Sbjct: 657  LLQCYSNQVLPRCHTCGNFNDIAVQVAVSIWNQIENVAVFRSSILMKDVLDQVMMTMKHL 716

Query: 1581 VGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXSIPDMSGLSCKDEWLISL 1402
            V  CTEESQ  +++KAY  L  T F                  I D + +SC+DEW+ SL
Sbjct: 717  VAGCTEESQFLILQKAYGSLPKTFFIAEPLPCALSQLEGLQC-IQDTTLMSCRDEWIFSL 775

Query: 1401 FASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPSAYN 1222
            F S+VIALRPQTP+ +V  L+ LF + LLKG++ AAQALASM+NKWP +V+++E   +Y+
Sbjct: 776  FGSVVIALRPQTPLVNVKILLNLFVVLLLKGNMLAAQALASMVNKWPADVNKSE--ISYS 833

Query: 1221 LEETINVVLENLSAILSSSPLKECKIVNDTDDXXXXXXXXXFQIHGVVGLAWIGKSLLMR 1042
            L++ I  +L            K C   +++            + + V+GLAWIGK LLMR
Sbjct: 834  LDQAIEEIL------------KSCLWTSESSSNFIDRDSCFHK-NVVLGLAWIGKGLLMR 880

Query: 1041 GHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAADAFHILLSDSE 862
            GHE++KEIA LLLK L++ + V  T     E+ K  GQD++S L   AADAFH+ LSDSE
Sbjct: 881  GHEKLKEIAMLLLKCLVAGKYVDITPFQQHENGKDAGQDASSPLATFAADAFHVFLSDSE 940

Query: 861  VCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHIFSNTPLVVLV 682
             CLNKKFHATIRPLYKQRF+SSM+P+LL         S +  LYRA GH+ S+TPL  +V
Sbjct: 941  DCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESDPSSKKVVLYRAFGHVISDTPLAAVV 1000

Query: 681  AEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVENAXXXXXXXXX 502
             EAKKI+P L + L++ SLD  NK++ Y+LLLV+SGILMD NGK  ++EN          
Sbjct: 1001 GEAKKIVPTLADALAMLSLDILNKDLIYSLLLVVSGILMDNNGKAIVLENVHTIISLLIK 1060

Query: 501  XXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKIVRQEAVRCRQ 322
              SYPH M+VRETAIQCL A+SALP+ RIYP RPQVLRA++ +LDDRK++VRQEAVRCRQ
Sbjct: 1061 LISYPHLMIVRETAIQCLVAISALPYARIYPYRPQVLRAVSTALDDRKRVVRQEAVRCRQ 1120

Query: 321  AW 316
            AW
Sbjct: 1121 AW 1122


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  751 bits (1938), Expect = 0.0
 Identities = 427/922 (46%), Positives = 580/922 (62%), Gaps = 13/922 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLSRALM AF ST  FEP AI            LAK+DSLKYLSNC+L YG  RM KH  
Sbjct: 244  DLSRALMLAFSSTTLFEPFAIPLLLEKLSSSLPLAKVDSLKYLSNCLLKYGDDRMTKHVE 303

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            AIW ++KDA+F  S Q  M +  S+  + V  QE++I  EA+  L   I +    NS   
Sbjct: 304  AIWFSVKDAIF-CSEQEPMLSLASELLDHVGFQENEIVTEAIILLQKVILE----NSGLS 358

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +SLI+ D+DI     +V   RSY+ I  +S+ +L ++G IL ++ K S  CC+ VF+ FF
Sbjct: 359  LSLIVGDKDINTIVNTVTSFRSYNDIPLQSKHKLCAIGRILYVSAKASITCCNRVFESFF 418

Query: 2472 PRLMNVLGVSMSDSSHSCIKECK-TFSNILNFGALYLCVELLASCRDLTMVAQDL---SP 2305
             RLM+ LG+S+ +SS  C+      FS  LNFGALYLC+ELLA+CRDL + +++L   S 
Sbjct: 419  FRLMDTLGLSVRNSSGDCLPNFDYVFSERLNFGALYLCIELLAACRDLVVGSEELTSKSV 478

Query: 2304 QVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVSE 2125
               +SW  +L  FS  +  A  S L  +         +   VKGLQ+L TFPG   P+S+
Sbjct: 479  SAQESWCCMLHSFSSLLMKAFSSVLDASTDKDAYEADIYSGVKGLQILATFPGEFLPISK 538

Query: 2124 DIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIAS 1945
             I+E++L   +S+I    + T LW+  L+ALVQIG  I++F +++K LSY+  VVE+I S
Sbjct: 539  SIFENVLLTFISIIVEDFNKTLLWKLALKALVQIGSFIDRFHESEKALSYNYIVVEKIVS 598

Query: 1944 LLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILV 1765
            L+ LDD      L+LEAIS+IG  G + M  +++GLE+AIF++ S+ YV+GN+ +A+I V
Sbjct: 599  LMFLDDFGLPFQLRLEAISDIGTTGLNVMLKIVQGLEDAIFANLSEVYVHGNLKSAKIAV 658

Query: 1764 PLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMKL 1585
             LLECYSN++LP  H  G  + +  +FA NIWN +E S   SV  Q   +L+ATM AMKL
Sbjct: 659  QLLECYSNKLLPGIHGAGDFEDVLSRFAVNIWNQIENSMAFSVGAQENELLNATMTAMKL 718

Query: 1584 VVGYCTEESQSTLVRKAYNILSST-TFP-QXXXXXXXXXXXXXXXSIPDMSGLSCKDEWL 1411
             VG C+E SQ  +++KAY++LSS  +F                     D+   SC+D+W+
Sbjct: 719  AVGSCSEGSQGKIIKKAYSVLSSCPSFTLMESMPITGTVQLEGLQHTQDLECFSCRDKWV 778

Query: 1410 ISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPS 1231
            ISLFAS +IA+RPQT IP++  ++ LF   LLKGH+PAAQAL SM+NK     +  E  S
Sbjct: 779  ISLFASAIIAVRPQTHIPNIRVVLHLFMTNLLKGHVPAAQALGSMVNKLCPKSNGVEISS 838

Query: 1230 AYNLEETINVVLE-NLSAILSSSPLKECKIVNDTDDXXXXXXXXXF------QIHGVVGL 1072
               LE+ ++++   +L    +  PLK C  +   ++                Q+  + GL
Sbjct: 839  TCTLEDALDIIFNTSLWDSHNHGPLKRCSGIGVDNEMGLANLCLSASNCQLLQVCAIEGL 898

Query: 1071 AWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAAD 892
            AWIGK LL+RGHE+VK+I  + L+ LLS  N    ++P               + ++AAD
Sbjct: 899  AWIGKGLLLRGHEKVKDITMIFLRCLLSKNNQEQDVLPS--------------VAKSAAD 944

Query: 891  AFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHI 712
            AFH+L+SDSE+CLNK+FHA IRPLYKQRF+SS++P+L+         +TR+ LYRAL HI
Sbjct: 945  AFHVLMSDSEICLNKRFHANIRPLYKQRFFSSVLPILVSSMAESRLSNTRSMLYRALAHI 1004

Query: 711  FSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVEN 532
             S+TPL+ +++EAKKIIP LL+ LSI S    +K++ YNLLLVLSGILMD+NG+E +VEN
Sbjct: 1005 ISDTPLIAVLSEAKKIIPILLDSLSILSTYNLDKDILYNLLLVLSGILMDKNGQETVVEN 1064

Query: 531  AXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKI 352
            A            YPH M+VRETAIQCL AMS LPH RIYPMR QVLR++  +LDD K+ 
Sbjct: 1065 AHVIINCLIGLVGYPHMMVVRETAIQCLVAMSRLPHARIYPMRTQVLRSVQKALDDPKRA 1124

Query: 351  VRQEAVRCRQAWASIASRSLHF 286
            VR EAVRCRQAWASIASRSLHF
Sbjct: 1125 VRHEAVRCRQAWASIASRSLHF 1146


>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Citrus sinensis]
          Length = 1151

 Score =  721 bits (1862), Expect = 0.0
 Identities = 412/921 (44%), Positives = 577/921 (62%), Gaps = 12/921 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLSRALM AF ST  FEP AI             AK+DSLKYLS+C + YGA R+ KHA 
Sbjct: 242  DLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVKYGADRIEKHAK 301

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            A+WS++KDAV++       FAS  +S + V  +E+ I  E+LN L     Q    NS  F
Sbjct: 302  AMWSSIKDAVYSSHEPTLSFAS--ESLDGVGFRENVILTESLNLLDTVFKQ----NSGLF 355

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +S I+ D+DI   F S+   ++Y  IS +S+++L ++GSILS++ K S   C+ V + FF
Sbjct: 356  LSWIIGDEDINLIFKSISSYKTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFF 415

Query: 2472 PRLMNVLGVSMSDSSHSCI-KECKTFSNILNFGALYLCVELLASCRDLTMVAQD---LSP 2305
            P LM+ LG+S+ +S+  C   +       LN GALYLC+EL+ +CR+L   +++   ++ 
Sbjct: 416  PCLMHALGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAA 475

Query: 2304 QVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVSE 2125
               + W+ LL+ +S  +  AL+S L  +    +   ++   VKGL +L TF G    +S 
Sbjct: 476  PANERWYCLLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFRGGSLIISN 535

Query: 2124 DIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIAS 1945
             I+E+IL    S+I +  ++T LW+  L+ALV IG  I++F++++K LSY   V+E+I S
Sbjct: 536  SIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVS 595

Query: 1944 LLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILV 1765
            L S  D      LKLEAISEIG  G +++  +++GLEEA+ ++  +  V+GN  +AE++V
Sbjct: 596  LASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVV 655

Query: 1764 PLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMKL 1585
             LLECYSN+VLP  H  G  +++ L+FA NIWNL+EKS   S  +  +G+LDATM AMKL
Sbjct: 656  QLLECYSNKVLPRIHEIGGFEEVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKL 715

Query: 1584 VVGYCTEESQSTLVRKAYNILS-STTFPQXXXXXXXXXXXXXXXSIPDMSGLSCKDEWLI 1408
             VG C+ ESQ+ + +KA+ +LS  T FP                   + S  S ++ W+ 
Sbjct: 716  AVGSCSVESQNIVFQKAFTVLSLGTYFPLEDAASNIPILLNEFQLTQETSISSSREAWIC 775

Query: 1407 SLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPSA 1228
            SLFAS++IA RPQT IP+V  +IRLF   LLKG++PAAQAL SM+NK     +  E    
Sbjct: 776  SLFASVIIAARPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGN 835

Query: 1227 YNLEETINVVLE------NLSAIL-SSSPLKECKIVNDTDDXXXXXXXXXFQIHGVVGLA 1069
              LEE ++++ +      N S  L S+  L+    +  TD           Q+H + GLA
Sbjct: 836  CTLEEAMDIIFDSKLWSFNDSVTLRSNGGLENGSSIGLTDICRGATNIRSLQVHAIAGLA 895

Query: 1068 WIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAADA 889
            WIGK LLMRGHE+VK+I    ++ LLSN  + +  +  D SE     +S+  + + AADA
Sbjct: 896  WIGKGLLMRGHEKVKDITMTFIECLLSNSKLGSFSLEQDYSE-----NSSESVVKYAADA 950

Query: 888  FHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHIF 709
            F IL+ DSE CL++K HATIRPLYKQRFYS++MP+L           +R+ L RA  HI 
Sbjct: 951  FKILMGDSEDCLSRKLHATIRPLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHII 1010

Query: 708  SNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVENA 529
            S+TPL+V++ +AK +IP L++GLSI S D S+K++ Y+LLLVLSGIL D+NG+EA++E A
Sbjct: 1011 SDTPLIVVLNDAKTVIPILMDGLSILSNDVSDKDIVYSLLLVLSGILTDKNGQEAVIECA 1070

Query: 528  XXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKIV 349
                       SYPH MLVRETAIQCL AMS LPH RIYPMR QVL+A++ +LDD K+ V
Sbjct: 1071 HIIIDHSIILISYPHMMLVRETAIQCLVAMSGLPHARIYPMRRQVLQAVSRALDDPKRAV 1130

Query: 348  RQEAVRCRQAWASIASRSLHF 286
            RQEAVRCRQAWAS ASRSL+F
Sbjct: 1131 RQEAVRCRQAWASTASRSLYF 1151


>gb|KDO51789.1| hypothetical protein CISIN_1g001284mg [Citrus sinensis]
          Length = 1103

 Score =  718 bits (1853), Expect = 0.0
 Identities = 409/921 (44%), Positives = 577/921 (62%), Gaps = 12/921 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLSRALM AF ST  FEP AI             AK+DSLKYLS+C + YGA R+ KHA 
Sbjct: 194  DLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVKYGADRIEKHAK 253

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            A+WS++KDA+++       FAS  +S + V  +++ I  E+LN L     Q    NS  F
Sbjct: 254  AMWSSIKDAIYSSHEPTLSFAS--ESLDGVGFRDNVILTESLNLLDTVFKQ----NSGLF 307

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +S I+ D+DI   F S+   ++Y  IS +S+++L ++GSILS++ K S   C+ V + FF
Sbjct: 308  LSWIIGDEDINLIFKSISSFKTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFF 367

Query: 2472 PRLMNVLGVSMSDSSHSCI-KECKTFSNILNFGALYLCVELLASCRDLTMVAQD---LSP 2305
            P LM+ LG+S+ +S+  C   +       LN GALYLC+EL+ +CR+L   +++   ++ 
Sbjct: 368  PCLMHPLGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAA 427

Query: 2304 QVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVSE 2125
               + W+ LL+ +S  +  AL+S L  +    +   ++   VKGL +L TF G    +S 
Sbjct: 428  PANERWYCLLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFSGGSLIISN 487

Query: 2124 DIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIAS 1945
             I+E+IL    S+I +  ++T LW+  L+ALV IG  I++F++++K LSY   V+E+I S
Sbjct: 488  SIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVS 547

Query: 1944 LLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILV 1765
            L S  D      LKLEAISEIG  G +++  +++GLEEA+ ++  +  V+GN  +AE++V
Sbjct: 548  LASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVV 607

Query: 1764 PLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMKL 1585
             LLECYSN+VLP  H  G  +++ L+FA NIWNL+EKS   S  +  +G+LDATM AMKL
Sbjct: 608  QLLECYSNKVLPRIHEIGGFEEVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKL 667

Query: 1584 VVGYCTEESQSTLVRKAYNILS-STTFPQXXXXXXXXXXXXXXXSIPDMSGLSCKDEWLI 1408
             VG C+ ESQ+ + +KA+ +LS  T FP                   + S  S ++ W+ 
Sbjct: 668  AVGSCSVESQNIVFQKAFTVLSLGTYFPLEDAASNIPILLNEFQLTQETSISSSREAWIC 727

Query: 1407 SLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPSA 1228
            SLFAS++IA RPQT IP+V  +IRLF   LLKG++PAAQAL SM+NK     +  E    
Sbjct: 728  SLFASVIIAARPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGN 787

Query: 1227 YNLEETINVVLE------NLSAIL-SSSPLKECKIVNDTDDXXXXXXXXXFQIHGVVGLA 1069
              LEE ++++ +      N S  L S+  L+    +  TD           Q+H + GLA
Sbjct: 788  CTLEEAMDIIFDSKLWSFNDSVTLRSNGGLENGSSIGLTDICRGATNIRSLQVHAIAGLA 847

Query: 1068 WIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAADA 889
            WIGK LLMRGHE+VK+I    ++ LLSN  + +  +  D SE     +S+  + + AADA
Sbjct: 848  WIGKGLLMRGHEKVKDITMTFIECLLSNSKLGSFSLEQDYSE-----NSSESVVKYAADA 902

Query: 888  FHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHIF 709
            F IL+ DSE CL++K HATIRPLYKQRFYS++MP+L           +R+ L RA  HI 
Sbjct: 903  FKILMGDSEDCLSRKLHATIRPLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHII 962

Query: 708  SNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVENA 529
            S+TPL+V++ +AK +IP L++GLSI S D S+K++ Y+LLLVLSGIL D+NG+EA++E A
Sbjct: 963  SDTPLIVVLNDAKTVIPILMDGLSILSNDVSDKDIVYSLLLVLSGILTDKNGQEAVIECA 1022

Query: 528  XXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKIV 349
                       SYPH MLVRETAIQCL AMS LPH RIYPMR +VL+A++ +LDD K+ V
Sbjct: 1023 HIIIDHSIILISYPHMMLVRETAIQCLVAMSKLPHARIYPMRREVLQAISRALDDPKRAV 1082

Query: 348  RQEAVRCRQAWASIASRSLHF 286
            RQEAVRCRQAWAS ASRSL+F
Sbjct: 1083 RQEAVRCRQAWASTASRSLYF 1103


>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Citrus sinensis]
          Length = 1155

 Score =  717 bits (1851), Expect = 0.0
 Identities = 413/925 (44%), Positives = 577/925 (62%), Gaps = 16/925 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLSRALM AF ST  FEP AI             AK+DSLKYLS+C + YGA R+ KHA 
Sbjct: 242  DLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVKYGADRIEKHAK 301

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            A+WS++KDAV++       FAS  +S + V  +E+ I  E+LN L     Q    NS  F
Sbjct: 302  AMWSSIKDAVYSSHEPTLSFAS--ESLDGVGFRENVILTESLNLLDTVFKQ----NSGLF 355

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +S I+ D+DI   F S+   ++Y  IS +S+++L ++GSILS++ K S   C+ V + FF
Sbjct: 356  LSWIIGDEDINLIFKSISSYKTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFF 415

Query: 2472 PRLMNVLGVSMSDSSHSCI-KECKTFSNILNFGALYLCVELLASCRDLTMVAQD---LSP 2305
            P LM+ LG+S+ +S+  C   +       LN GALYLC+EL+ +CR+L   +++   ++ 
Sbjct: 416  PCLMHALGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAA 475

Query: 2304 QVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVSE 2125
               + W+ LL+ +S  +  AL+S L  +    +   ++   VKGL +L TF G    +S 
Sbjct: 476  PANERWYCLLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFRGGSLIISN 535

Query: 2124 DIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIAS 1945
             I+E+IL    S+I +  ++T LW+  L+ALV IG  I++F++++K LSY   V+E+I S
Sbjct: 536  SIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVS 595

Query: 1944 LLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILV 1765
            L S  D      LKLEAISEIG  G +++  +++GLEEA+ ++  +  V+GN  +AE++V
Sbjct: 596  LASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVV 655

Query: 1764 PLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMKL 1585
             LLECYSN+VLP  H  G  +++ L+FA NIWNL+EKS   S  +  +G+LDATM AMKL
Sbjct: 656  QLLECYSNKVLPRIHEIGGFEEVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKL 715

Query: 1584 VVGYCTEESQSTLVRKAYNILS-STTFPQXXXXXXXXXXXXXXXSIPDMSGLSCKDEWLI 1408
             VG C+ ESQ+ + +KA+ +LS  T FP                   + S  S ++ W+ 
Sbjct: 716  AVGSCSVESQNIVFQKAFTVLSLGTYFPLEDAASNIPILLNEFQLTQETSISSSREAWIC 775

Query: 1407 SLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPSA 1228
            SLFAS++IA RPQT IP+V  +IRLF   LLKG++PAAQAL SM+NK     +  E    
Sbjct: 776  SLFASVIIAARPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGN 835

Query: 1227 YNLEETINVVLE------NLSAIL-SSSPLKECKIVNDTDDXXXXXXXXXFQIHGVVGLA 1069
              LEE ++++ +      N S  L S+  L+    +  TD           Q+H + GLA
Sbjct: 836  CTLEEAMDIIFDSKLWSFNDSVTLRSNGGLENGSSIGLTDICRGATNIRSLQVHAIAGLA 895

Query: 1068 WIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAADA 889
            WIGK LLMRGHE+VK+I    ++ LLSN  + +  +  D SE     +S+  + + AADA
Sbjct: 896  WIGKGLLMRGHEKVKDITMTFIECLLSNSKLGSFSLEQDYSE-----NSSESVVKYAADA 950

Query: 888  FHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHIF 709
            F IL+ DSE CL++K HATIRPLYKQRFYS++MP+L           +R+ L RA  HI 
Sbjct: 951  FKILMGDSEDCLSRKLHATIRPLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHII 1010

Query: 708  SNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGK----EAI 541
            S+TPL+V++ +AK +IP L++GLSI S D S+K++ Y+LLLVLSGIL D+NGK    EA+
Sbjct: 1011 SDTPLIVVLNDAKTVIPILMDGLSILSNDVSDKDIVYSLLLVLSGILTDKNGKTIGQEAV 1070

Query: 540  VENAXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDR 361
            +E A           SYPH MLVRETAIQCL AMS LPH RIYPMR QVL+A++ +LDD 
Sbjct: 1071 IECAHIIIDHSIILISYPHMMLVRETAIQCLVAMSGLPHARIYPMRRQVLQAVSRALDDP 1130

Query: 360  KKIVRQEAVRCRQAWASIASRSLHF 286
            K+ VRQEAVRCRQAWAS ASRSL+F
Sbjct: 1131 KRAVRQEAVRCRQAWASTASRSLYF 1155


>gb|KDO51790.1| hypothetical protein CISIN_1g001284mg [Citrus sinensis]
          Length = 1107

 Score =  714 bits (1842), Expect = 0.0
 Identities = 410/925 (44%), Positives = 577/925 (62%), Gaps = 16/925 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLSRALM AF ST  FEP AI             AK+DSLKYLS+C + YGA R+ KHA 
Sbjct: 194  DLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVKYGADRIEKHAK 253

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            A+WS++KDA+++       FAS  +S + V  +++ I  E+LN L     Q    NS  F
Sbjct: 254  AMWSSIKDAIYSSHEPTLSFAS--ESLDGVGFRDNVILTESLNLLDTVFKQ----NSGLF 307

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +S I+ D+DI   F S+   ++Y  IS +S+++L ++GSILS++ K S   C+ V + FF
Sbjct: 308  LSWIIGDEDINLIFKSISSFKTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFF 367

Query: 2472 PRLMNVLGVSMSDSSHSCI-KECKTFSNILNFGALYLCVELLASCRDLTMVAQD---LSP 2305
            P LM+ LG+S+ +S+  C   +       LN GALYLC+EL+ +CR+L   +++   ++ 
Sbjct: 368  PCLMHPLGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAA 427

Query: 2304 QVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVSE 2125
               + W+ LL+ +S  +  AL+S L  +    +   ++   VKGL +L TF G    +S 
Sbjct: 428  PANERWYCLLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFSGGSLIISN 487

Query: 2124 DIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIAS 1945
             I+E+IL    S+I +  ++T LW+  L+ALV IG  I++F++++K LSY   V+E+I S
Sbjct: 488  SIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVS 547

Query: 1944 LLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILV 1765
            L S  D      LKLEAISEIG  G +++  +++GLEEA+ ++  +  V+GN  +AE++V
Sbjct: 548  LASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVV 607

Query: 1764 PLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMKL 1585
             LLECYSN+VLP  H  G  +++ L+FA NIWNL+EKS   S  +  +G+LDATM AMKL
Sbjct: 608  QLLECYSNKVLPRIHEIGGFEEVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKL 667

Query: 1584 VVGYCTEESQSTLVRKAYNILS-STTFPQXXXXXXXXXXXXXXXSIPDMSGLSCKDEWLI 1408
             VG C+ ESQ+ + +KA+ +LS  T FP                   + S  S ++ W+ 
Sbjct: 668  AVGSCSVESQNIVFQKAFTVLSLGTYFPLEDAASNIPILLNEFQLTQETSISSSREAWIC 727

Query: 1407 SLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPSA 1228
            SLFAS++IA RPQT IP+V  +IRLF   LLKG++PAAQAL SM+NK     +  E    
Sbjct: 728  SLFASVIIAARPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGN 787

Query: 1227 YNLEETINVVLE------NLSAIL-SSSPLKECKIVNDTDDXXXXXXXXXFQIHGVVGLA 1069
              LEE ++++ +      N S  L S+  L+    +  TD           Q+H + GLA
Sbjct: 788  CTLEEAMDIIFDSKLWSFNDSVTLRSNGGLENGSSIGLTDICRGATNIRSLQVHAIAGLA 847

Query: 1068 WIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAADA 889
            WIGK LLMRGHE+VK+I    ++ LLSN  + +  +  D SE     +S+  + + AADA
Sbjct: 848  WIGKGLLMRGHEKVKDITMTFIECLLSNSKLGSFSLEQDYSE-----NSSESVVKYAADA 902

Query: 888  FHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHIF 709
            F IL+ DSE CL++K HATIRPLYKQRFYS++MP+L           +R+ L RA  HI 
Sbjct: 903  FKILMGDSEDCLSRKLHATIRPLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHII 962

Query: 708  SNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGK----EAI 541
            S+TPL+V++ +AK +IP L++GLSI S D S+K++ Y+LLLVLSGIL D+NGK    EA+
Sbjct: 963  SDTPLIVVLNDAKTVIPILMDGLSILSNDVSDKDIVYSLLLVLSGILTDKNGKTIGQEAV 1022

Query: 540  VENAXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDR 361
            +E A           SYPH MLVRETAIQCL AMS LPH RIYPMR +VL+A++ +LDD 
Sbjct: 1023 IECAHIIIDHSIILISYPHMMLVRETAIQCLVAMSKLPHARIYPMRREVLQAISRALDDP 1082

Query: 360  KKIVRQEAVRCRQAWASIASRSLHF 286
            K+ VRQEAVRCRQAWAS ASRSL+F
Sbjct: 1083 KRAVRQEAVRCRQAWASTASRSLYF 1107


>ref|XP_006853692.2| PREDICTED: MMS19 nucleotide excision repair protein homolog
            [Amborella trichopoda]
          Length = 1126

 Score =  709 bits (1830), Expect = 0.0
 Identities = 398/925 (43%), Positives = 565/925 (61%), Gaps = 16/925 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLSR +MNAF S+P FEP  I            +AK+D+LKYLS+C   YG  RM  HA 
Sbjct: 205  DLSRRMMNAFSSSPLFEPFCIPLLLEKLSSSLEMAKLDALKYLSHCAPRYGPSRMASHAY 264

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            AIWSALKD +FNLS  G   + + +  +++ SQE+++ KEAL CL   +   +    E F
Sbjct: 265  AIWSALKDVIFNLSSHGPSISIICELPDNLGSQENEVVKEALVCLENCVLVFDIPKDETF 324

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            + LI++D+D+E  F S+  E+    +  E +++  +L +IL  + K S+ CC+ VF  FF
Sbjct: 325  LRLIVEDEDLEMTFRSITSEKCNKDLPHERKQRFCALRNILFTSAKVSSACCNRVFGSFF 384

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFSNI-LNFGALYLCVELLASCRDLT--MVAQDLSPQ 2302
             RLMN L +S  DS         ++  + L+F AL++C+EL+A+   L   + +Q++ P 
Sbjct: 385  QRLMNFLRISSLDSPFDWASNRNSYVCVELDFEALHICLELIAASNHLANALSSQEVCPT 444

Query: 2301 -VPDSWWYLLKDFSGPVTFAL-------KSALVNTGTAATGPEHMSCVVKGLQVLTTFPG 2146
               D W  LL+ FSG + FAL       KS+ +   + + G E +   V GLQ+L TFP 
Sbjct: 445  PTQDPWLLLLQSFSGCLVFALGSSVVANKSSSIREMSPSIGEEDLPLKVTGLQILATFPD 504

Query: 2145 HISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKF 1966
              SP+S D +E+ILA  MSVIT R ++T LW +TL+ALVQ+G+ IE++ D+++ + +   
Sbjct: 505  SYSPLSRDAFENILAVFMSVITERYEETSLWTSTLKALVQVGMSIERYHDSQRGVCFMTI 564

Query: 1965 VVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNV 1786
            V+E++ S L        L+L L+AISEI   G  FM  V +G  EA+ ++F ++   GN 
Sbjct: 565  VIEKLLSYLFNRSTFPPLSLNLKAISEIAMMGLCFMKRVTKGFGEALSTNFLEAVAEGNT 624

Query: 1785 GAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDA 1606
             +AE+ + +L+CYS  +LPW       ++ A+  A++IW+ ME S +  +    + +L+A
Sbjct: 625  KSAEMAIEILKCYSLYLLPWLQNKEGFEEDAMHLATDIWSYME-SISFCIGSHGKSLLEA 683

Query: 1605 TMMAMKLVVGYCTEESQSTLVRKAYNILSSTTF--PQXXXXXXXXXXXXXXXSIPDMSGL 1432
            TMMAMKL VG CT   QS++V KA+NIL+S+T    +                 P+    
Sbjct: 684  TMMAMKLAVGCCTMNQQSSIVSKAHNILASSTLYLVKDSMSLSTSVQLEKLKITPESVSS 743

Query: 1431 SCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIF-LLKGHLPAAQALASMINKWPGN 1255
            +CKD WLISLFAS+VIAL+PQT IPD+  ++ LF I  LLKG   +AQAL S++NKWP  
Sbjct: 744  ACKDGWLISLFASVVIALQPQTVIPDLRIILELFMIVVLLKGDEASAQALGSIVNKWP-- 801

Query: 1254 VSRAEQPSAYNLEETINVVLEN--LSAILSSSPLKECKIVNDTDDXXXXXXXXXFQIHGV 1081
            V   E   A  L E +++++E      I + +  K   + N+ +           ++H +
Sbjct: 802  VKSNEVSGACTLGEAMDIMVERGFRPIIFNVNQKKHEDVDNNKEIVSHLPISNDSRVHAL 861

Query: 1080 VGLAWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRA 901
             GLAWIGK L+MRGHE+VK+I  LLL  +L    + +     D      G+  N  + R+
Sbjct: 862  FGLAWIGKGLVMRGHEKVKDITLLLLSCVLPTGGMRSMPSQHDVLGNDGGESINIAVARS 921

Query: 900  AADAFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRAL 721
            AADAFHI++SDSE  +N+KFHATIRPLYKQRF S++MP+LL          T++ L+R  
Sbjct: 922  AADAFHIIMSDSETSVNQKFHATIRPLYKQRFCSTVMPILLSSIKESHSSITKSMLFRTF 981

Query: 720  GHIFSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAI 541
            GHI   TPL  ++ EA KI+PPLL+GLS+ +LD  NK+  Y+LL+VLSGILMDE GKEA+
Sbjct: 982  GHIIIGTPLAAILIEAPKIVPPLLDGLSMLTLDVQNKDQIYDLLVVLSGILMDETGKEAV 1041

Query: 540  VENAXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDR 361
            VENA           +YPH M+VRETAIQCL AM+ALPH RIYPMR QVL  ++ +LDD+
Sbjct: 1042 VENAHTIIGCLSKLVTYPHLMIVRETAIQCLVAMAALPHARIYPMRLQVLETVSKALDDQ 1101

Query: 360  KKIVRQEAVRCRQAWASIASRSLHF 286
            K+ VRQEAVRC   WAS+ASRSL F
Sbjct: 1102 KRSVRQEAVRCHHVWASMASRSLRF 1126


>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
            gi|557528866|gb|ESR40116.1| hypothetical protein
            CICLE_v10024743mg [Citrus clementina]
          Length = 1155

 Score =  709 bits (1830), Expect = 0.0
 Identities = 408/925 (44%), Positives = 576/925 (62%), Gaps = 16/925 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLSRALM AF ST  FEP AI             AK+DSLKYLS+C + YGA R+ KHA 
Sbjct: 242  DLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVKYGADRIEKHAK 301

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            A+WS++KDA+++       FAS  +S + V  +++ I  E+LN L     Q    NS  F
Sbjct: 302  AMWSSIKDAIYSSHEPTLSFAS--ESLDGVGFRDNVILTESLNLLDTVFKQ----NSGLF 355

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +S I+ D+DI   F S+   ++Y  IS +S+++L ++GSILS++ K S   C+ V + FF
Sbjct: 356  LSWIIGDEDINLIFKSISSFKTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFF 415

Query: 2472 PRLMNVLGVSMSDSSHSCI-KECKTFSNILNFGALYLCVELLASCRDLTMVAQD---LSP 2305
            P LM+ LG+S+ +S+  C   +       LN GALYLC+EL+ +CR+L   +++   ++ 
Sbjct: 416  PCLMHPLGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAA 475

Query: 2304 QVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVSE 2125
               + W+ LL+ +S  +  AL+S L  +    +   ++   VKGL +L TF G    +S 
Sbjct: 476  PANERWYCLLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFSGGSLIISN 535

Query: 2124 DIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIAS 1945
             I+E+IL    S+I +  ++T LW+  L+ALV IG  I++F++++K LSY   V+E+I S
Sbjct: 536  SIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVS 595

Query: 1944 LLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILV 1765
            L S  D      LKLEAISEIG  G +++  +++GLEEA+ ++  +  V+GN  +AE++V
Sbjct: 596  LASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVV 655

Query: 1764 PLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMKL 1585
             LLECYSN+VLP  H  G  +++ L+FA NIWNL+EKS   S  +  +G+LDATM AMKL
Sbjct: 656  QLLECYSNKVLPRIHEIGGFEEVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKL 715

Query: 1584 VVGYCTEESQSTLVRKAYNILS-STTFPQXXXXXXXXXXXXXXXSIPDMSGLSCKDEWLI 1408
             VG C+ ESQ+ + +KA+ +LS  T FP                   + S  S ++ W+ 
Sbjct: 716  AVGSCSVESQNIVFQKAFTVLSLGTYFPLEDAASNIPIQLNEFQLTQETSISSSREAWIC 775

Query: 1407 SLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPSA 1228
            SLFAS++IA  PQT IP+V  +IRLF   LLKG++PAAQAL SM+NK     +  E    
Sbjct: 776  SLFASVIIAACPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGN 835

Query: 1227 YNLEETINVVLE------NLSAIL-SSSPLKECKIVNDTDDXXXXXXXXXFQIHGVVGLA 1069
              LEE ++++ +      N S  L S+  L+    +  TD           Q+H + GLA
Sbjct: 836  CTLEEAMDIIFDSKLWSFNDSVTLRSNGGLENGSSIGLTDICRGATNIRSLQVHAIAGLA 895

Query: 1068 WIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAADA 889
            WIGK LLMRGHE+VK+I    ++ LLSN  + +  +  D SE     +S+  + + AADA
Sbjct: 896  WIGKGLLMRGHEKVKDITMTFIECLLSNSKLGSFSLEQDYSE-----NSSESVVKYAADA 950

Query: 888  FHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHIF 709
            F IL+ DSE CL++K HATIRPLYKQRFYS++MP+L           +R+ L RA  HI 
Sbjct: 951  FKILMGDSEDCLSRKLHATIRPLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHII 1010

Query: 708  SNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDEN----GKEAI 541
            S+TPL+V++ +AK +IP L++GLSI S D S+K++ Y+LLLVLSGIL D+N    G+EA+
Sbjct: 1011 SDTPLIVVLNDAKTVIPILMDGLSILSNDVSDKDIVYSLLLVLSGILTDKNVKTIGQEAV 1070

Query: 540  VENAXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDR 361
            +E A           SYPH MLVRETAIQCL AMS LPH RIYPMR +VL+A++ +LDD 
Sbjct: 1071 IECAHIIIDHIIKLISYPHMMLVRETAIQCLVAMSKLPHARIYPMRREVLQAISRALDDP 1130

Query: 360  KKIVRQEAVRCRQAWASIASRSLHF 286
            K+ VRQEAVRCRQAWAS ASRSL+F
Sbjct: 1131 KRAVRQEAVRCRQAWASTASRSLYF 1155


>gb|ERN15159.1| hypothetical protein AMTR_s00056p00136660 [Amborella trichopoda]
          Length = 1160

 Score =  709 bits (1830), Expect = 0.0
 Identities = 398/925 (43%), Positives = 565/925 (61%), Gaps = 16/925 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLSR +MNAF S+P FEP  I            +AK+D+LKYLS+C   YG  RM  HA 
Sbjct: 239  DLSRRMMNAFSSSPLFEPFCIPLLLEKLSSSLEMAKLDALKYLSHCAPRYGPSRMASHAY 298

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            AIWSALKD +FNLS  G   + + +  +++ SQE+++ KEAL CL   +   +    E F
Sbjct: 299  AIWSALKDVIFNLSSHGPSISIICELPDNLGSQENEVVKEALVCLENCVLVFDIPKDETF 358

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            + LI++D+D+E  F S+  E+    +  E +++  +L +IL  + K S+ CC+ VF  FF
Sbjct: 359  LRLIVEDEDLEMTFRSITSEKCNKDLPHERKQRFCALRNILFTSAKVSSACCNRVFGSFF 418

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFSNI-LNFGALYLCVELLASCRDLT--MVAQDLSPQ 2302
             RLMN L +S  DS         ++  + L+F AL++C+EL+A+   L   + +Q++ P 
Sbjct: 419  QRLMNFLRISSLDSPFDWASNRNSYVCVELDFEALHICLELIAASNHLANALSSQEVCPT 478

Query: 2301 -VPDSWWYLLKDFSGPVTFAL-------KSALVNTGTAATGPEHMSCVVKGLQVLTTFPG 2146
               D W  LL+ FSG + FAL       KS+ +   + + G E +   V GLQ+L TFP 
Sbjct: 479  PTQDPWLLLLQSFSGCLVFALGSSVVANKSSSIREMSPSIGEEDLPLKVTGLQILATFPD 538

Query: 2145 HISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKF 1966
              SP+S D +E+ILA  MSVIT R ++T LW +TL+ALVQ+G+ IE++ D+++ + +   
Sbjct: 539  SYSPLSRDAFENILAVFMSVITERYEETSLWTSTLKALVQVGMSIERYHDSQRGVCFMTI 598

Query: 1965 VVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNV 1786
            V+E++ S L        L+L L+AISEI   G  FM  V +G  EA+ ++F ++   GN 
Sbjct: 599  VIEKLLSYLFNRSTFPPLSLNLKAISEIAMMGLCFMKRVTKGFGEALSTNFLEAVAEGNT 658

Query: 1785 GAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDA 1606
             +AE+ + +L+CYS  +LPW       ++ A+  A++IW+ ME S +  +    + +L+A
Sbjct: 659  KSAEMAIEILKCYSLYLLPWLQNKEGFEEDAMHLATDIWSYME-SISFCIGSHGKSLLEA 717

Query: 1605 TMMAMKLVVGYCTEESQSTLVRKAYNILSSTTF--PQXXXXXXXXXXXXXXXSIPDMSGL 1432
            TMMAMKL VG CT   QS++V KA+NIL+S+T    +                 P+    
Sbjct: 718  TMMAMKLAVGCCTMNQQSSIVSKAHNILASSTLYLVKDSMSLSTSVQLEKLKITPESVSS 777

Query: 1431 SCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIF-LLKGHLPAAQALASMINKWPGN 1255
            +CKD WLISLFAS+VIAL+PQT IPD+  ++ LF I  LLKG   +AQAL S++NKWP  
Sbjct: 778  ACKDGWLISLFASVVIALQPQTVIPDLRIILELFMIVVLLKGDEASAQALGSIVNKWP-- 835

Query: 1254 VSRAEQPSAYNLEETINVVLEN--LSAILSSSPLKECKIVNDTDDXXXXXXXXXFQIHGV 1081
            V   E   A  L E +++++E      I + +  K   + N+ +           ++H +
Sbjct: 836  VKSNEVSGACTLGEAMDIMVERGFRPIIFNVNQKKHEDVDNNKEIVSHLPISNDSRVHAL 895

Query: 1080 VGLAWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRA 901
             GLAWIGK L+MRGHE+VK+I  LLL  +L    + +     D      G+  N  + R+
Sbjct: 896  FGLAWIGKGLVMRGHEKVKDITLLLLSCVLPTGGMRSMPSQHDVLGNDGGESINIAVARS 955

Query: 900  AADAFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRAL 721
            AADAFHI++SDSE  +N+KFHATIRPLYKQRF S++MP+LL          T++ L+R  
Sbjct: 956  AADAFHIIMSDSETSVNQKFHATIRPLYKQRFCSTVMPILLSSIKESHSSITKSMLFRTF 1015

Query: 720  GHIFSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAI 541
            GHI   TPL  ++ EA KI+PPLL+GLS+ +LD  NK+  Y+LL+VLSGILMDE GKEA+
Sbjct: 1016 GHIIIGTPLAAILIEAPKIVPPLLDGLSMLTLDVQNKDQIYDLLVVLSGILMDETGKEAV 1075

Query: 540  VENAXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDR 361
            VENA           +YPH M+VRETAIQCL AM+ALPH RIYPMR QVL  ++ +LDD+
Sbjct: 1076 VENAHTIIGCLSKLVTYPHLMIVRETAIQCLVAMAALPHARIYPMRLQVLETVSKALDDQ 1135

Query: 360  KKIVRQEAVRCRQAWASIASRSLHF 286
            K+ VRQEAVRC   WAS+ASRSL F
Sbjct: 1136 KRSVRQEAVRCHHVWASMASRSLRF 1160


>ref|XP_008228424.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Prunus
            mume]
          Length = 1159

 Score =  699 bits (1803), Expect = 0.0
 Identities = 396/926 (42%), Positives = 567/926 (61%), Gaps = 23/926 (2%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLS+ALM+AF STP FEP  I            LAK+DSLKYL++C   YGA RM KHA 
Sbjct: 244  DLSKALMSAFSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAKHAG 303

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            AIW +LKDA+ N   +  M +  S+    +  QE++IA EAL    M + ++   N   F
Sbjct: 304  AIWISLKDAISNSLEKPAM-SFTSEPLYGLGFQENEIATEAL----MLLQKVTLQNEALF 358

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +SLI+ D+ I   F S+     Y+ I  + ++ L ++G IL I +KTS   C+ VF+ FF
Sbjct: 359  LSLIIQDEGINIVFNSIASHEHYNNIPLQGKQWLHAVGRILYIISKTSMASCNSVFESFF 418

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTF-SNILNFGALYLCVELLASCRDLTMVAQDLSPQVP 2296
            PRLMN L +S+++SS  C     +F S   NFGALYLCVEL+A+CRDL M  +DL+P+ P
Sbjct: 419  PRLMNTLEISVTNSSGDCTLNENSFPSKKYNFGALYLCVELIAACRDLIMRLKDLAPK-P 477

Query: 2295 DS----WWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVS 2128
            D+      Y+L+ F+  +  A  S+L            +   VKGLQ+L TFPG   P+S
Sbjct: 478  DTPQETCRYMLQSFADSLVNAFSSSLATNANEVAHGADIYFKVKGLQILATFPGDFLPIS 537

Query: 2127 EDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIA 1948
            + ++ +IL  LMS+I    +   LW+  L+ALV IG  ++ + +++K L Y   VV++  
Sbjct: 538  KFLFANILTILMSIILVDFNKILLWKLVLKALVHIGSFVDMYHESEKALCYMGAVVDKTV 597

Query: 1947 SLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEIL 1768
            SL+S DD     +LKLEA+SEIG +G + M  ++ G+EEAI +  SD YV+GN+ +AE  
Sbjct: 598  SLVSRDDFNMPFSLKLEAVSEIGASGRNHMLKIVHGMEEAIVAKLSD-YVHGNLKSAEKT 656

Query: 1767 VPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMK 1588
            + LLECY N++L W +  G  +++ L+F  NIW+ +E   + S+ +Q + +LDATMMAMK
Sbjct: 657  IQLLECYCNKILSWINETGGLEEVLLRFVINIWSCVESCKDFSIQVQEEELLDATMMAMK 716

Query: 1587 LVVGYCTEESQSTLVRKAYNILSS------------TTFPQXXXXXXXXXXXXXXXSIPD 1444
            L +G C+EESQ+ ++ KAY+++SS            T+  Q                   
Sbjct: 717  LAIGSCSEESQNIIIHKAYSVISSSISIPFKDSLDATSSIQLEELRVSEQIDKSSHRDDQ 776

Query: 1443 MSGLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKW 1264
            +   S +DEW++SLFAS++IA+RP+  I +V  ++ LF   +LKG +PAAQA  S+INK 
Sbjct: 777  IDKFSRRDEWILSLFASVIIAVRPKAQIVNVKGILHLFMTTVLKGCVPAAQASGSVINKL 836

Query: 1263 PGNVSRAEQPSAYNLEETINVVLE------NLSAILSSSPLKECKIVNDTDDXXXXXXXX 1102
                +     +   LEE ++++        N + +L +        V  TD         
Sbjct: 837  GTKSNETANSNDCTLEEAVDMIFSTKLWNLNENGVLQTCGSGNGSKVGLTDLCLGFSSNK 896

Query: 1101 XFQIHGVVGLAWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDS 922
              Q+H +VGLAWIGK LL+ GHE+VK++ K+LL+ LLS   +    V + +    N  + 
Sbjct: 897  LLQVHAIVGLAWIGKGLLLLGHEKVKDVTKILLECLLSEGRICA--VELKQGLLENSYEQ 954

Query: 921  NSHLTRAAADAFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTR 742
            +S +TR+AADAFHI++SDSEVCLN+KFHA  RPLYKQRF+S++MP+L            R
Sbjct: 955  HS-VTRSAADAFHIIMSDSEVCLNRKFHAIARPLYKQRFFSTVMPILQSWIIKSDSSVCR 1013

Query: 741  ATLYRALGHIFSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMD 562
            + L+RA  H+ SN PL+V+++EAKK++P LL+GLS+ S D  +K+  Y+LLLVLSGIL D
Sbjct: 1014 SMLFRASAHLISNAPLIVILSEAKKLMPVLLDGLSLLSEDILDKDKLYSLLLVLSGILTD 1073

Query: 561  ENGKEAIVENAXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRAL 382
            +NG+ A++ENA            YPH MLVRETA+QCL A S LP+ RI+PMR QVL+A+
Sbjct: 1074 KNGQVAVIENAHILVNCLTRLVDYPHMMLVRETALQCLLATSELPYARIFPMRTQVLQAI 1133

Query: 381  AMSLDDRKKIVRQEAVRCRQAWASIA 304
              +LDD K+ VRQEAVRCR+AWASIA
Sbjct: 1134 CKALDDPKRAVRQEAVRCRRAWASIA 1159


>ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
            gi|462413691|gb|EMJ18740.1| hypothetical protein
            PRUPE_ppa023072mg [Prunus persica]
          Length = 1158

 Score =  690 bits (1780), Expect = 0.0
 Identities = 394/922 (42%), Positives = 560/922 (60%), Gaps = 23/922 (2%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLS+ALM+AF STP FEP  I            LAK+DSLKYL++C   YGA RM KHA 
Sbjct: 244  DLSKALMSAFSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAKHAG 303

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            AIW +LKDA+ N   +  M +  S+    +  QE++IA EAL    M + ++   N   F
Sbjct: 304  AIWISLKDAISNSLEKPDM-SFTSEPLYGLGFQENEIATEAL----MLLQKVTLQNEALF 358

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +SLI+ D+ I   F S+     Y+ I  + ++ L ++G IL I +KTS   C+ VF+ FF
Sbjct: 359  LSLIIQDEGINIVFNSIASHEHYNNIPLQGKQWLHAVGRILYIISKTSMASCNSVFESFF 418

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTF-SNILNFGALYLCVELLASCRDLTMVAQDLSPQVP 2296
            PRLMN L +S+++S+  C     TF S   NFGALYLCVEL+A+CRDL M ++DL+P+ P
Sbjct: 419  PRLMNTLEISVTNSAGDCTLNENTFPSKKFNFGALYLCVELIAACRDLIMRSKDLAPK-P 477

Query: 2295 DS----WWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVS 2128
            D+      Y+L+ F+  +  A  S+L            +   VKGLQ+L TFPG   P+S
Sbjct: 478  DTPQETCRYMLQSFADSLVNAFSSSLATNANEVAHGADIYFKVKGLQILATFPGDFLPIS 537

Query: 2127 EDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIA 1948
            + ++ +IL  LMS+I    +   LW+  L+ALV IG  ++ + +++K L Y   VV++  
Sbjct: 538  KFLFANILTILMSIILVDFNKILLWKLVLKALVHIGSFVDVYHESEKALGYMGAVVDKTV 597

Query: 1947 SLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEIL 1768
            SL+S DDV    +LKLEA SEIG +G + M  +++G+EEAI +  SD YV+GN+ +AE  
Sbjct: 598  SLVSRDDVKMPFSLKLEAASEIGASGRNHMLKIVQGMEEAIVAKLSD-YVHGNLKSAEKT 656

Query: 1767 VPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMK 1588
            + LLECY N++L W +  G  +++ L+F  NIWN +E   + S+ +Q + +LDATMMAMK
Sbjct: 657  IQLLECYCNKILSWINETGGLEEVLLRFVINIWNCVESCKDFSIQVQEEELLDATMMAMK 716

Query: 1587 LVVGYCTEESQSTLVRKAYNILSS------------TTFPQXXXXXXXXXXXXXXXSIPD 1444
            L +G C+EESQ+ ++ KAY+++SS            T+  Q                   
Sbjct: 717  LAIGSCSEESQNIIIHKAYSVISSSISIPFKESLDATSSIQLEELSVSEQIDNSSHRDDQ 776

Query: 1443 MSGLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKW 1264
            +   S +DEW++S FAS++IA+RP+  I +V  ++ LF   +LKG +PAAQAL S+INK 
Sbjct: 777  IDKFSLRDEWILSHFASVIIAVRPKAQIVNVKGILHLFMTTVLKGCVPAAQALGSVINKL 836

Query: 1263 PGNVSRAEQPSAYNLEETINVVLEN-LSAILSSSPLKECKIVND-----TDDXXXXXXXX 1102
                +         LEE ++++    L  +  +  L+ C   N      TD         
Sbjct: 837  GTKSNETANSIDCTLEEAVDMIFRTKLWNLNENGVLRTCGSGNGSKVGLTDLCLGFSSNK 896

Query: 1101 XFQIHGVVGLAWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDS 922
              ++H VVGLAWIGK LL+ GHE+VK++ K+LL+ LLS   +    +     E    Q S
Sbjct: 897  LLRVHAVVGLAWIGKGLLLLGHEKVKDVTKILLECLLSEGRIRAMELKQGLLENSYEQHS 956

Query: 921  NSHLTRAAADAFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTR 742
               + R+AADAFHIL+SDSEVCLN+KFHA  RPLYKQRF+S++MP+L            R
Sbjct: 957  ---VMRSAADAFHILMSDSEVCLNRKFHAIARPLYKQRFFSTVMPILQSCIIKSDSSVCR 1013

Query: 741  ATLYRALGHIFSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMD 562
            + L+RA  H+ SN PL+V+++EAKK++P LL+GLS+ S D  +K+  Y+LLLVLSGIL D
Sbjct: 1014 SMLFRASAHLISNAPLIVILSEAKKLMPVLLDGLSLLSEDILDKDKLYSLLLVLSGILTD 1073

Query: 561  ENGKEAIVENAXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRAL 382
            +NG+ A++ENA            YPH M VRETA+QCL A S LP+ RI+PMR QVL+A+
Sbjct: 1074 KNGQVAVIENAHILVNCLTRLIDYPHMMFVRETALQCLIATSELPYARIFPMRTQVLQAI 1133

Query: 381  AMSLDDRKKIVRQEAVRCRQAW 316
              +LDD K+ VRQEAVRCR+AW
Sbjct: 1134 CKALDDPKRAVRQEAVRCRRAW 1155


>ref|XP_007024310.1| MMS19 nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|590619491|ref|XP_007024311.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779676|gb|EOY26932.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao]
          Length = 1149

 Score =  677 bits (1747), Expect = 0.0
 Identities = 407/923 (44%), Positives = 569/923 (61%), Gaps = 14/923 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DL+RALM AF STP FEP AI             AK+DSL+YLS+C + YG  RM KH  
Sbjct: 244  DLARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSLRYLSDCTVKYGVDRMAKHGE 303

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            A+WS+LKDAVF  S  G + +   +S E +   E++IA EAL+ L   I Q    N+  F
Sbjct: 304  ALWSSLKDAVFT-SLDGVL-SFTPESLEGLCLPENEIAAEALSLLQKLIVQ----NTNFF 357

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            + LI+ D+DI   F  +   +SY GI  +S+++L ++G ILS + K ST  C+ VF+ FF
Sbjct: 358  LDLIVVDEDINMIFNMISSYKSYHGIPAQSKQRLHAVGCILSASVKASTASCNRVFECFF 417

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTF-SNILNFGALYLCVELLASCRDLTMVAQDL---SP 2305
             RLM++LG+ + +SS +   +         N GALYL +ELL++CRD+   ++ +   S 
Sbjct: 418  SRLMDILGLCVRNSSGNLSSDDSIMIPKRYNHGALYLSIELLSACRDVIASSETIIAASA 477

Query: 2304 QVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVSE 2125
               ++W YLL+ FS  +T A  SA + T   +   + +   VKGL +L TFP     +S+
Sbjct: 478  HTEETWSYLLRSFSSSLTKAFCSASICTSEDSHDAD-VYFGVKGLLILATFPEGYLLISK 536

Query: 2124 DIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIAS 1945
             ++E IL   +S++T    +T LW+  L+ALVQIG  IEK  +++K+ SY   VVE+I S
Sbjct: 537  PVFEKILMTFVSIVTVDYSNTLLWKLALKALVQIGSFIEKCHESEKEPSYLGLVVEKIVS 596

Query: 1944 LLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILV 1765
              SL D      L+LEA+SEIG +G  +M  V+ GLEEAI+++ S+ YV+G+  +AEI+ 
Sbjct: 597  FSSLGDFSIPFPLRLEALSEIGTSGKSYMLKVVEGLEEAIYANLSEVYVHGSSNSAEIVT 656

Query: 1764 PLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSV-DLQRQGVLDATMMAMK 1588
             LL+CYS++V+PW       D++ LQFA +IWN +E S   +     +  VLD  M AMK
Sbjct: 657  QLLKCYSDKVIPWIQCAKGFDEVPLQFAIHIWNQIELSMVFNATQTNKIEVLDVMMKAMK 716

Query: 1587 LVVGYCTEESQSTLVRKAYNILSSTT-FPQXXXXXXXXXXXXXXXSIPDMSGLSCKDEWL 1411
            L V  C+EE+Q+ +V+K+Y+ILSS+T FP                 I  +   S +DEW+
Sbjct: 717  LAVASCSEENQNIIVQKSYHILSSSTSFP------LKELFRQESFQIVQVDNSSSRDEWI 770

Query: 1410 ISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPS 1231
            +SLFA++VIA+ P+T +P++  L+ LF   LLKG++  AQAL S++NK    +  A   +
Sbjct: 771  LSLFAAVVIAVHPETYVPNIKPLLYLFMTTLLKGNVVTAQALGSVVNKL--GLESAGVQT 828

Query: 1230 AYNLEETINVVLENLSAIL---SSSPLKECKIVNDTDDXXXXXXXXXF-----QIHGVVG 1075
               LEE ++++L NLS  +   +SS   + K+ +  D                QIH +VG
Sbjct: 829  DCTLEEVMDIIL-NLSLWIFHSNSSADIQAKMTSAHDISLINLCSSIGSCTSLQIHAIVG 887

Query: 1074 LAWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAA 895
            LAWIGK LLMRGHE+VK+I  + L+ L  N            SE  N  D +  + ++AA
Sbjct: 888  LAWIGKGLLMRGHEKVKDITMIFLRCLQPNGRAEILHQEEGISESNNELDLHHSVMKSAA 947

Query: 894  DAFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGH 715
            DAF IL+ DSEVCLN+ FHA IRPLYKQRF+S+MMP+L           +R  L RA  H
Sbjct: 948  DAFQILMGDSEVCLNRGFHAVIRPLYKQRFFSTMMPIL-QSLIMKSEPLSRPLLLRASAH 1006

Query: 714  IFSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVE 535
            I  +TPL+V++++AKKIIP LL+GLS  S D  +K++ Y LLLVLSGILMD+NG+EA+ +
Sbjct: 1007 IIVDTPLIVVLSDAKKIIPMLLDGLSALSNDILDKDVIYGLLLVLSGILMDKNGQEAVSD 1066

Query: 534  NAXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKK 355
            +A            YPH MLVRETAIQCL A+S L + R+YPMR QVL+A+A +LDD K+
Sbjct: 1067 SAHTITNRLIELIQYPHMMLVRETAIQCLVAISGLSYARVYPMRTQVLQAIAKALDDPKR 1126

Query: 354  IVRQEAVRCRQAWASIASRSLHF 286
             VRQEAVRCRQAWASIASRSLHF
Sbjct: 1127 AVRQEAVRCRQAWASIASRSLHF 1149


>ref|XP_008380856.1| PREDICTED: uncharacterized protein LOC103443743 [Malus domestica]
          Length = 1146

 Score =  676 bits (1743), Expect = 0.0
 Identities = 395/916 (43%), Positives = 552/916 (60%), Gaps = 13/916 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLS+ALM+A  STP FEP  I            LAK+DSLKYL++C   YGA RM KHA 
Sbjct: 244  DLSKALMSALSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAKHAE 303

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
             IW ++K A+ N S +    +   +    +  QE+++A EAL    M + ++   N   F
Sbjct: 304  TIWISVKHAISN-SLEKPAISFTEEPLYGLGFQENEVATEAL----MLLEKVTMQNEVLF 358

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            ++LI+ D+DI   F S+    +Y+ I  + +++L ++G IL   TKTS   C  VF+ FF
Sbjct: 359  VNLIVRDEDINTVFNSIASYENYN-IPLQGKQRLHAVGRILYKITKTSAASCKSVFESFF 417

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFS-NILNFGALYLCVELLASCRDLTMVAQDLSPQVP 2296
            P LMN L +S+ +SS  C     +FS    NFGALYL VEL+ +CRDL M  +DL+P+ P
Sbjct: 418  PCLMNTLEISVRNSSGDCSLNENSFSLKRFNFGALYLSVELIEACRDLIMKFKDLAPK-P 476

Query: 2295 DSWW----YLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVS 2128
            D+      Y+L+ F+  +  A  S+L        G E +   VKGLQ+L TFPG I P+S
Sbjct: 477  DTTHATCCYMLQSFADSLIIAFCSSLATHLNEVHGAE-IYFTVKGLQMLATFPGDILPIS 535

Query: 2127 EDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIA 1948
            + I+E+IL  LMS+I    + T LW+  L+ALV IG  ++ + +++K LSY   VVE+  
Sbjct: 536  KIIFENILTELMSIILVDFNKTLLWKLALKALVHIGSFVDAYHESEKALSYIDLVVEKTL 595

Query: 1947 SLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEIL 1768
            SL+S DD      LKLE +SEIG +G + M  +++GLEEAI    SD YV+G +  AE  
Sbjct: 596  SLVSHDDFNVPFPLKLETVSEIGASGLNHMLRIVQGLEEAIVGKLSD-YVHGKLNLAEGT 654

Query: 1767 VPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMK 1588
            + LLECY N++LPW    G  +++ L+F  NIWN  E   + S+ +Q + +LDA MMAMK
Sbjct: 655  IQLLECYCNKILPWIKETGGLEEVLLRFVINIWNATESCKDFSIQVQEEELLDAAMMAMK 714

Query: 1587 LVVGYCTEESQSTLVRKAYNILSST-TFPQXXXXXXXXXXXXXXXSIPDMSG-LSCKDEW 1414
            L VG C++ESQ  +V KAY++LSS  + P                 + +     S +DEW
Sbjct: 715  LAVGSCSDESQKIMVDKAYSVLSSNISIPFKESMDATSSIQLQELHVSEQRDTFSHRDEW 774

Query: 1413 LISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQP 1234
            ++SLFAS++IA+ P+T I ++  L+ LF   LLKG +P AQAL S+INK        E  
Sbjct: 775  IVSLFASIIIAVHPKTQIANLKGLLHLFMTTLLKGCVPVAQALGSVINKLGTKSKDTENS 834

Query: 1233 SAYNLEETINVVLE------NLSAILSSSPLKECKIVNDTDDXXXXXXXXXFQIHGVVGL 1072
                LEE I+++        N + +L +S       V+ TD           Q+  +VGL
Sbjct: 835  KDCTLEEAIDMIFGTNIWSFNENGVLKTSGTSNGIKVSLTDLCLGFLSNKQLQVRALVGL 894

Query: 1071 AWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAAD 892
            AWIGK LL+ GHE+VK++ K+ L+ LL+          M+  + +        + R AAD
Sbjct: 895  AWIGKGLLLLGHEKVKDVTKIFLECLLAEGRKRA----MELQQGLENSYEQHSVMRTAAD 950

Query: 891  AFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHI 712
            AFHIL+SDSEVCLN+KFHA  RPLYKQRF+SS+MP+L           +R+ L RA  H+
Sbjct: 951  AFHILMSDSEVCLNRKFHAITRPLYKQRFFSSVMPILQSMIINSDSSLSRSMLVRASAHL 1010

Query: 711  FSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVEN 532
             SN PL+ +++EA+K++P +L+GLS+ S D  +K+  Y+LLLVLSGIL D+NGK A+VEN
Sbjct: 1011 ISNAPLIAILSEAEKLMPIMLDGLSVLSEDILDKDKLYSLLLVLSGILTDKNGKVAVVEN 1070

Query: 531  AXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKI 352
            A            YPH MLVRETAIQCL A S LP+ RI+PMR QVL+A++ +L+D K+ 
Sbjct: 1071 AHILINCLTRLIGYPHMMLVRETAIQCLVATSELPYARIFPMRTQVLQAISKALNDPKRA 1130

Query: 351  VRQEAVRCRQAWASIA 304
            VRQEAVRCR+AWASIA
Sbjct: 1131 VRQEAVRCRRAWASIA 1146


>ref|XP_009342537.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Pyrus x bretschneideri]
          Length = 1026

 Score =  674 bits (1738), Expect = 0.0
 Identities = 393/916 (42%), Positives = 552/916 (60%), Gaps = 13/916 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLS+ALM+A  STP FEP  I            LAK+DSLKYL++C   YGA RM KHA 
Sbjct: 124  DLSKALMSALSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAKHAE 183

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
             IW ++K A+ N S +    +   +    +  QE+++A EAL    M + ++   N   F
Sbjct: 184  TIWISVKHAISN-SLEKPAISFTEEPLYGLGFQENEVATEAL----MLLEKVTMQNEALF 238

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            ++LI+ D+DI   F S+    +Y+ I  + +++L ++G IL   TKTS   C  VF+ FF
Sbjct: 239  VNLIVRDEDINAVFNSITRYENYN-IPLQGKQRLHAVGRILYKITKTSAASCKSVFESFF 297

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFSNI-LNFGALYLCVELLASCRDLTMVAQDLSPQVP 2296
            P LMN L +S+ +SS  C     +FS+   NFGALYL VEL+ +CRDL M  +DL+P+ P
Sbjct: 298  PCLMNTLEISVRNSSGDCSLNENSFSSKRFNFGALYLSVELIEACRDLIMTFKDLAPK-P 356

Query: 2295 DSWW----YLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVS 2128
            D+      Y+L+ F+  +  A  S+L        G E +   VKGLQ+L TFPG   P+S
Sbjct: 357  DTTHATCCYMLQSFADSLIIAFCSSLATYLNEVHGAE-IYFTVKGLQMLATFPGDFLPIS 415

Query: 2127 EDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIA 1948
            + I+E+IL  LMS+I    +   LW+  L+ALV IG  ++ + +++K LSY   VVE+  
Sbjct: 416  KIIFENILTELMSIILVDFNKALLWKLALKALVHIGSFVDAYHESEKALSYIDLVVEKTL 475

Query: 1947 SLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEIL 1768
            SL+S DD      LKLE +SEIG +G + M  +++GLEEAI    SD YV+G +  AE  
Sbjct: 476  SLVSHDDFNVPFPLKLETVSEIGASGLNHMLKIVQGLEEAIVGKLSD-YVHGKLNLAERT 534

Query: 1767 VPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMK 1588
            + LLECY N++LPW    G  +++ L+F  NIWN  E   + SV ++ + +LDA MMAMK
Sbjct: 535  IQLLECYCNKILPWIKETGGLEEVLLRFVINIWNASESCKDFSVQVREEELLDAVMMAMK 594

Query: 1587 LVVGYCTEESQSTLVRKAYNILSST-TFPQXXXXXXXXXXXXXXXSIPDMSG-LSCKDEW 1414
            L VG C++ESQ  +V KAY++LSS  + P                 + +     S +DEW
Sbjct: 595  LAVGSCSDESQKIMVDKAYSVLSSNISIPFKESMDATSSIQLQELHVSEQRDTFSHRDEW 654

Query: 1413 LISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQP 1234
            ++SLFAS++IA+ P+T I ++  L+ LF   LLKG +PAAQAL S+INK        E  
Sbjct: 655  IVSLFASIIIAVHPKTQIANLKGLLHLFMTTLLKGCVPAAQALGSVINKLGTKSKETENS 714

Query: 1233 SAYNLEETINVVLE------NLSAILSSSPLKECKIVNDTDDXXXXXXXXXFQIHGVVGL 1072
                LEE I+++        N + +L +S       V+ TD           Q+  ++GL
Sbjct: 715  KDCTLEEAIDMIFGTNIWSFNENGVLKTSGTSNGIKVSLTDLCLGFSSNKQLQVRALIGL 774

Query: 1071 AWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAAD 892
            AWIGK LL+ GHE+VK++ K+ L+ LLS          M+  + +        + R AAD
Sbjct: 775  AWIGKGLLLLGHEKVKDVTKIFLECLLSEGRKHA----MELQQGLENSYEQHSVMRTAAD 830

Query: 891  AFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHI 712
            AFHIL+SDSEVCLN+KFHA  RPLYKQRF+SS++P+L           +R+ L RA  H+
Sbjct: 831  AFHILMSDSEVCLNRKFHAITRPLYKQRFFSSVIPILQSMIIKSDSSLSRSMLVRASAHL 890

Query: 711  FSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVEN 532
             SN PL+ +++EA+K++P +L+GLS+ S D  +K+  Y+LLLVLSGIL D+NGK A+VEN
Sbjct: 891  ISNAPLIAILSEAEKLMPIMLDGLSVLSEDILDKDKLYSLLLVLSGILTDKNGKVAVVEN 950

Query: 531  AXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKI 352
            A            YPH MLVRETAIQCL A S LP+ RI+PMR QVL+A++ +L+D K+ 
Sbjct: 951  AHILINCLTRLIGYPHMMLVRETAIQCLVATSELPYARIFPMRTQVLQAISKALNDPKRA 1010

Query: 351  VRQEAVRCRQAWASIA 304
            VRQEAVRCR+AWASIA
Sbjct: 1011 VRQEAVRCRRAWASIA 1026


>ref|XP_009342535.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Pyrus x bretschneideri]
          Length = 1146

 Score =  674 bits (1738), Expect = 0.0
 Identities = 393/916 (42%), Positives = 552/916 (60%), Gaps = 13/916 (1%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            DLS+ALM+A  STP FEP  I            LAK+DSLKYL++C   YGA RM KHA 
Sbjct: 244  DLSKALMSALSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAKHAE 303

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
             IW ++K A+ N S +    +   +    +  QE+++A EAL    M + ++   N   F
Sbjct: 304  TIWISVKHAISN-SLEKPAISFTEEPLYGLGFQENEVATEAL----MLLEKVTMQNEALF 358

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            ++LI+ D+DI   F S+    +Y+ I  + +++L ++G IL   TKTS   C  VF+ FF
Sbjct: 359  VNLIVRDEDINAVFNSITRYENYN-IPLQGKQRLHAVGRILYKITKTSAASCKSVFESFF 417

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFSNI-LNFGALYLCVELLASCRDLTMVAQDLSPQVP 2296
            P LMN L +S+ +SS  C     +FS+   NFGALYL VEL+ +CRDL M  +DL+P+ P
Sbjct: 418  PCLMNTLEISVRNSSGDCSLNENSFSSKRFNFGALYLSVELIEACRDLIMTFKDLAPK-P 476

Query: 2295 DSWW----YLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVS 2128
            D+      Y+L+ F+  +  A  S+L        G E +   VKGLQ+L TFPG   P+S
Sbjct: 477  DTTHATCCYMLQSFADSLIIAFCSSLATYLNEVHGAE-IYFTVKGLQMLATFPGDFLPIS 535

Query: 2127 EDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIA 1948
            + I+E+IL  LMS+I    +   LW+  L+ALV IG  ++ + +++K LSY   VVE+  
Sbjct: 536  KIIFENILTELMSIILVDFNKALLWKLALKALVHIGSFVDAYHESEKALSYIDLVVEKTL 595

Query: 1947 SLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEIL 1768
            SL+S DD      LKLE +SEIG +G + M  +++GLEEAI    SD YV+G +  AE  
Sbjct: 596  SLVSHDDFNVPFPLKLETVSEIGASGLNHMLKIVQGLEEAIVGKLSD-YVHGKLNLAERT 654

Query: 1767 VPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMK 1588
            + LLECY N++LPW    G  +++ L+F  NIWN  E   + SV ++ + +LDA MMAMK
Sbjct: 655  IQLLECYCNKILPWIKETGGLEEVLLRFVINIWNASESCKDFSVQVREEELLDAVMMAMK 714

Query: 1587 LVVGYCTEESQSTLVRKAYNILSST-TFPQXXXXXXXXXXXXXXXSIPDMSG-LSCKDEW 1414
            L VG C++ESQ  +V KAY++LSS  + P                 + +     S +DEW
Sbjct: 715  LAVGSCSDESQKIMVDKAYSVLSSNISIPFKESMDATSSIQLQELHVSEQRDTFSHRDEW 774

Query: 1413 LISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQP 1234
            ++SLFAS++IA+ P+T I ++  L+ LF   LLKG +PAAQAL S+INK        E  
Sbjct: 775  IVSLFASIIIAVHPKTQIANLKGLLHLFMTTLLKGCVPAAQALGSVINKLGTKSKETENS 834

Query: 1233 SAYNLEETINVVLE------NLSAILSSSPLKECKIVNDTDDXXXXXXXXXFQIHGVVGL 1072
                LEE I+++        N + +L +S       V+ TD           Q+  ++GL
Sbjct: 835  KDCTLEEAIDMIFGTNIWSFNENGVLKTSGTSNGIKVSLTDLCLGFSSNKQLQVRALIGL 894

Query: 1071 AWIGKSLLMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAAD 892
            AWIGK LL+ GHE+VK++ K+ L+ LLS          M+  + +        + R AAD
Sbjct: 895  AWIGKGLLLLGHEKVKDVTKIFLECLLSEGRKHA----MELQQGLENSYEQHSVMRTAAD 950

Query: 891  AFHILLSDSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHI 712
            AFHIL+SDSEVCLN+KFHA  RPLYKQRF+SS++P+L           +R+ L RA  H+
Sbjct: 951  AFHILMSDSEVCLNRKFHAITRPLYKQRFFSSVIPILQSMIIKSDSSLSRSMLVRASAHL 1010

Query: 711  FSNTPLVVLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVEN 532
             SN PL+ +++EA+K++P +L+GLS+ S D  +K+  Y+LLLVLSGIL D+NGK A+VEN
Sbjct: 1011 ISNAPLIAILSEAEKLMPIMLDGLSVLSEDILDKDKLYSLLLVLSGILTDKNGKVAVVEN 1070

Query: 531  AXXXXXXXXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKI 352
            A            YPH MLVRETAIQCL A S LP+ RI+PMR QVL+A++ +L+D K+ 
Sbjct: 1071 AHILINCLTRLIGYPHMMLVRETAIQCLVATSELPYARIFPMRTQVLQAISKALNDPKRA 1130

Query: 351  VRQEAVRCRQAWASIA 304
            VRQEAVRCR+AWASIA
Sbjct: 1131 VRQEAVRCRRAWASIA 1146


>ref|XP_010318526.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Solanum lycopersicum]
            gi|723685111|ref|XP_010318527.1| PREDICTED: MMS19
            nucleotide excision repair protein homolog isoform X1
            [Solanum lycopersicum]
          Length = 1140

 Score =  672 bits (1733), Expect = 0.0
 Identities = 383/915 (41%), Positives = 568/915 (62%), Gaps = 6/915 (0%)
 Frame = -3

Query: 3012 DLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXLAKIDSLKYLSNCMLHYGAVRMFKHAN 2833
            +LSRALM AF STP FEP  I             AK++SLKYLS C L YG  RM K+  
Sbjct: 246  ELSRALMLAFASTPLFEPSVIPLLLDKLSSSLPSAKVESLKYLSFCTLKYGGDRMEKYTK 305

Query: 2832 AIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNSEPF 2653
            ++WSALKDA+F  SPQ T+ +  S   + +   ES+I  +AL  L + + Q N +    F
Sbjct: 306  SLWSALKDALFT-SPQSTL-SEDSDPIDGLGFHESEIMTQALEFLQVLVRQHNAS----F 359

Query: 2652 ISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQKFF 2473
            +SLI+ D DI     S     +++ +S + +++L ++G +LS+  K S   C+ VF+ FF
Sbjct: 360  LSLIMGDGDISTFLNSFSQFDNFNSLSTQYKQRLHAVGHVLSVCIKASASSCNKVFESFF 419

Query: 2472 PRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQDLSPQ--- 2302
            PRL++ L +S+ D+SH  +      +   NFGALYLCVELLA+CR L + + +++     
Sbjct: 420  PRLVDALRLSV-DNSHGIVHSAVDAN--FNFGALYLCVELLAACRQLVVSSDEVASAHDL 476

Query: 2301 VPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPVSED 2122
              DSW  +L  FS  +       +  +   +T   ++   VKGL++L TFPG    VS+ 
Sbjct: 477  ARDSWCQILHSFSTSLCNVFFCLIRASCVESTRNAYVYAAVKGLEILATFPGSFISVSKL 536

Query: 2121 IYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIASL 1942
            +YE+IL  L S+I +  +  +LW+  L+ALV+I L + K+ + +K  S++  V ++I SL
Sbjct: 537  MYENILLTLTSIIESEFNKKFLWKAALKALVEISLFVNKYHEDEKAASFNSIVKQKIVSL 596

Query: 1941 LSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILVP 1762
            +S DD+    +LKLEA+ +IG  G +FM +V+  LE+ I ++ S+  V+G+   A +   
Sbjct: 597  ISSDDLNMPQSLKLEAVFDIGLTGKNFMLSVVSELEKTISANLSEILVHGDRRLAGLTAG 656

Query: 1761 LLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMKLV 1582
            LLECYSN+VLPW H  G  D+++L FA NI+  ME +T+LS++ + + +L ATM AMK  
Sbjct: 657  LLECYSNKVLPWFHVNGGADEVSLSFAVNIFTKMEHNTSLSLEAEGKELLGATMAAMKQA 716

Query: 1581 VGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXSIPDMS-GLSCKDEWLIS 1405
            +  C+ ESQ  +++KA +++ + +F                  +   S GLSC+DEW+IS
Sbjct: 717  MTCCSVESQEKVLQKAIDVMETNSFFFSNNLILGTDLFNKKTQLGQTSEGLSCQDEWIIS 776

Query: 1404 LFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPSAY 1225
            LFAS+VIALRPQT IP++  L++L  + LL+GH+P+AQAL S++NK P N+S        
Sbjct: 777  LFASVVIALRPQTQIPNIRLLLQLLAMTLLEGHIPSAQALGSLVNKLPLNISED-----C 831

Query: 1224 NLEETINVVLENLSAILSSSPLKECKIVNDTDDXXXXXXXXXFQI--HGVVGLAWIGKSL 1051
            +L+E I+++L+N+    + S  KE     +  D           +  H V+GLAWIGK L
Sbjct: 832  SLKELIDMLLKNV-LWRNISIGKE----GNHGDAVAMSNLRSSSLNSHAVIGLAWIGKGL 886

Query: 1050 LMRGHERVKEIAKLLLKYLLSNQNVMTTLVPMDESEKVNGQDSNSHLTRAAADAFHILLS 871
            LMRGHE++K++    L  L+SN++    L+P ++  K   +     L ++AADAFHI++S
Sbjct: 887  LMRGHEKLKDVTMTFLSCLVSNED-QGNLLPFNDQMKDPAELKVFSLRKSAADAFHIVMS 945

Query: 870  DSEVCLNKKFHATIRPLYKQRFYSSMMPVLLXXXXXXXXXSTRATLYRALGHIFSNTPLV 691
            DS+ CLN+ +HA +RPLYKQRF++ MMP+ L         ++R  LY+A  H+ S TPLV
Sbjct: 946  DSDACLNRNYHAIVRPLYKQRFFNIMMPMFLSAIAKCDSSTSRCFLYQAFAHLVSETPLV 1005

Query: 690  VLVAEAKKIIPPLLEGLSISSLDASNKEMTYNLLLVLSGILMDENGKEAIVENAXXXXXX 511
             +V +AKK++P L++   I S D S+KE+ Y++L+VLSGIL D+NG+E I+ENA      
Sbjct: 1006 AVVGDAKKVLPVLMDCFLILSKDISHKEIIYSVLIVLSGILTDKNGQETIIENAPMVIRR 1065

Query: 510  XXXXXSYPHKMLVRETAIQCLTAMSALPHTRIYPMRPQVLRALAMSLDDRKKIVRQEAVR 331
                 SYP+ M++RETAIQC  AMS LPH RIYPMR QVL+A+  +LDD K++VR EAV+
Sbjct: 1066 LIELTSYPYMMVIRETAIQCFGAMSELPHARIYPMRTQVLQAITKALDDPKRVVRLEAVK 1125

Query: 330  CRQAWASIASRSLHF 286
            CR AWASIASRS+HF
Sbjct: 1126 CRLAWASIASRSIHF 1140