BLASTX nr result
ID: Ophiopogon21_contig00012582
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00012582
(511 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 86 1e-18
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 85 1e-18
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 86 1e-18
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 85 2e-18
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 87 4e-18
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 87 4e-18
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 87 5e-18
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 87 5e-18
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 86 7e-18
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 86 1e-17
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 84 3e-17
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 84 3e-17
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 84 1e-16
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 79 4e-16
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 79 6e-16
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 78 2e-15
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 80 5e-15
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 79 6e-15
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g... 76 8e-15
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 83 3e-14
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 85.5 bits (210), Expect(2) = 1e-18
Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY V+G VL G+D C++ IG + +KM DG TLS++ H+ L+++++
Sbjct: 296 CPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 355
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVS 507
L TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G V+
Sbjct: 356 SLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVA 406
Score = 33.9 bits (76), Expect(2) = 1e-18
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 CHKYKEFMKKLGKNSDGASGKDD-QAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSY 178
C K ++ K+ GK +D+ +A VV + + L A +G D W+ DT C+Y
Sbjct: 234 CWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTY 293
Query: 179 HV 184
H+
Sbjct: 294 HM 295
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 85.1 bits (209), Expect(2) = 1e-18
Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY V+G VL G+D C++ IG + +KM DG TLS++ H+ L+++++
Sbjct: 311 CPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 370
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFKEK-RITNLYKMIGSVIAGAVS 507
L TL+ + YK+SG DG + +TK S+ + K + NLY + G+ I G V+
Sbjct: 371 SLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNVA 421
Score = 34.3 bits (77), Expect(2) = 1e-18
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 CHKYKEFMKKLGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSY 178
C K ++ K+ GK G ++ +A VV + + L A +G D W+ DT C+Y
Sbjct: 249 CWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTY 308
Query: 179 HV 184
H+
Sbjct: 309 HM 310
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 85.5 bits (210), Expect(2) = 1e-18
Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY V+G VL G+D C++ IG + +KM DG TLS++ H+ L+++++
Sbjct: 128 CPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 187
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVS 507
L TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G V+
Sbjct: 188 SLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVA 238
Score = 33.9 bits (76), Expect(2) = 1e-18
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 CHKYKEFMKKLGKNSDGASGKDD-QAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSY 178
C K ++ K+ GK +D+ +A VV + + L A +G D W+ DT C+Y
Sbjct: 66 CWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTY 125
Query: 179 HV 184
H+
Sbjct: 126 HM 127
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 84.7 bits (208), Expect(2) = 2e-18
Identities = 41/112 (36%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C+ +WF+TY +V+G VL G+D C++ + + +KM DG TLS++ H+ L+++++
Sbjct: 311 CLNRDWFATYEAVQGGTVLMGDDTPCEVAGVETVQIKMFDGCIRTLSDVRHIPNLKRSLI 370
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVSA 510
L TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G ++A
Sbjct: 371 SLCTLDRKVYKYSGGDGILKVTKGSLVVMKADIKSANLYHVRGTTILGNIAA 422
Score = 34.3 bits (77), Expect(2) = 2e-18
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 CHKYKEFMKKLGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSY 178
C K ++ K+ GK G ++ +A VV + + L A +G D W+ DT C+Y
Sbjct: 249 CWKLQDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTY 308
Query: 179 HV 184
H+
Sbjct: 309 HM 310
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 86.7 bits (213), Expect(2) = 4e-18
Identities = 44/112 (39%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY +V+G VL G+D C++ IG + +KM DG TLS++ H+ L+++++
Sbjct: 143 CPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLI 202
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVSA 510
L TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G V+A
Sbjct: 203 SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 254
Score = 31.2 bits (69), Expect(2) = 4e-18
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 26 KKLGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSYHV 184
K+ GK G ++ +A VV + + L A +G D W+ DT C+YH+
Sbjct: 89 KRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHM 142
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 86.7 bits (213), Expect(2) = 4e-18
Identities = 44/112 (39%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY +V+G VL G+D C++ IG + +KM DG TLS++ H+ L+++++
Sbjct: 143 CPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLI 202
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVSA 510
L TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G V+A
Sbjct: 203 SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 254
Score = 31.2 bits (69), Expect(2) = 4e-18
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 26 KKLGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSYHV 184
K+ GK G ++ +A VV + + L A +G D W+ DT C+YH+
Sbjct: 89 KRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHM 142
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 87.4 bits (215), Expect(2) = 5e-18
Identities = 43/112 (38%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY +++G VL G+D C++ IG + +KM DG TLS++ H+ L+++++
Sbjct: 346 CPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLI 405
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVSA 510
L TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G V+A
Sbjct: 406 SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 457
Score = 30.0 bits (66), Expect(2) = 5e-18
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 CHKYKEFMKKLGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSY 178
C K ++ K+ GK G ++ +A VV + + L A +G D W+ DT +Y
Sbjct: 284 CWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILDTAWTY 343
Query: 179 HV 184
H+
Sbjct: 344 HM 345
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 87.4 bits (215), Expect(2) = 5e-18
Identities = 43/112 (38%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY +++G VL G+D C++ IG + +KM DG TLS++ H+ L+++++
Sbjct: 346 CPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLI 405
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVSA 510
L TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G V+A
Sbjct: 406 SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 457
Score = 30.0 bits (66), Expect(2) = 5e-18
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 CHKYKEFMKKLGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSY 178
C K ++ K+ GK G ++ +A VV + + L A +G D W+ DT +Y
Sbjct: 284 CWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILDTAWTY 343
Query: 179 HV 184
H+
Sbjct: 344 HM 345
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 85.9 bits (211), Expect(2) = 7e-18
Identities = 43/112 (38%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY +V+G VL G+D C++ IG + +KM DG TL ++ H+ L+++++
Sbjct: 220 CPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLI 279
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVSA 510
L TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G V+A
Sbjct: 280 SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAA 331
Score = 31.2 bits (69), Expect(2) = 7e-18
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 CHKYKEFMKKLGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSY 178
C K ++ K+ K G ++ +A VV + + L A +G D W+ DT C+Y
Sbjct: 158 CWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTY 217
Query: 179 HV 184
H+
Sbjct: 218 HM 219
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 86.3 bits (212), Expect(2) = 1e-17
Identities = 43/112 (38%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY +V+G VL G+D C++ IG + +KM DG TLS++ H+ L+++++
Sbjct: 277 CPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 336
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVSA 510
TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G V+A
Sbjct: 337 SFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 388
Score = 30.0 bits (66), Expect(2) = 1e-17
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 32 LGKNSDGASGKDDQ--AGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSYHV 184
+G S A K+++ A VV + + L A G D W+ DT C+YH+
Sbjct: 224 VGDQSPEAGKKEEEGKAAVVTDEKSDAELLVAYVGCAQTSDQWILDTACTYHM 276
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 84.3 bits (207), Expect(2) = 3e-17
Identities = 43/112 (38%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY +V+ VL G+D C++ IG + +KM DG TLS++ H+ L+++++
Sbjct: 518 CPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 577
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVSA 510
L TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G V+A
Sbjct: 578 SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 629
Score = 30.4 bits (67), Expect(2) = 3e-17
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 CHKYKEFMKKLGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSY 178
C K + K+ GK G ++ +A VV + + L A +G D W+ +T C Y
Sbjct: 456 CWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILNTACIY 515
Query: 179 HV 184
H+
Sbjct: 516 HM 517
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 84.3 bits (207), Expect(2) = 3e-17
Identities = 43/112 (38%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY +V+ VL G+D C++ IG + +KM DG TLS++ H+ L+++++
Sbjct: 311 CPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 370
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVSA 510
L TL+ + YK+SG DG + +TK S+ + K + + NLY + G+ I G V+A
Sbjct: 371 SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 422
Score = 30.4 bits (67), Expect(2) = 3e-17
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 CHKYKEFMKKLGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSY 178
C K + K+ GK G ++ +A VV + + L A +G D W+ +T C Y
Sbjct: 249 CWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILNTACIY 308
Query: 179 HV 184
H+
Sbjct: 309 HM 310
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 84.3 bits (207), Expect(2) = 1e-16
Identities = 43/112 (38%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKG-NDVCQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C +WF+TY V+G VL G N C++ +G I +KM DG TLS++ H+ L++N++
Sbjct: 253 CPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLI 312
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFK-EKRITNLYKMIGSVIAGAVSA 510
L TL+ + Y++SG DG + +TK S+ + K + + +LY + G+ I G V+A
Sbjct: 313 SLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQGTTIVGNVAA 364
Score = 28.5 bits (62), Expect(2) = 1e-16
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 8 KYKEFMKKLGKNSDGASGKDDQAGVVEELEDPYNSLTAESGRDVYIDTWLFDTECSYHV 184
K+K K GK + +A V + + L A +G D WL DT C+YH+
Sbjct: 199 KHKGNYKPKGKQEE-----QGKAAVATDNKPDAELLVAYAGCVQTSDEWLLDTGCTYHM 252
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 79.0 bits (193), Expect(2) = 4e-16
Identities = 40/113 (35%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGND--VCQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNV 354
C+ +WFS+Y SV+ V++ D ++V IG++ +K HDG TL ++ H+ + +N+
Sbjct: 303 CINRDWFSSYKSVQNEDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNL 362
Query: 355 LLLGTLEAQKYKFSGKDGDVTITKDSIT-IFKEKRITNLYKMIGSVIAGAVSA 510
+ L TL+A+ YK+SG G V ++K S+ + + NLY + GS + G+V+A
Sbjct: 363 ISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTA 415
Score = 32.3 bits (72), Expect(2) = 4e-16
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 CHKYKEFMKKLGKNSDGASGKDD-QAGVVEELE--DPYNSLTAESGRDVYIDTWLFDTEC 172
C K F+++ K + K D +A VV E D + L +G D W+ DT C
Sbjct: 239 CKKKNHFIEECWKLQNKEKRKSDGKASVVTSAENSDSGDCLVVFAGYVASHDEWILDTAC 298
Query: 173 SYHV 184
S+H+
Sbjct: 299 SFHI 302
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 78.6 bits (192), Expect(2) = 6e-16
Identities = 41/113 (36%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Frame = +1
Query: 181 CVQGEWFSTYTSVE-GNLVLKGND-VCQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNV 354
C+ +WFS+Y SV+ G++V G+D ++V IG++ +K HDG TL ++ H+ + +N+
Sbjct: 303 CINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNL 362
Query: 355 LLLGTLEAQKYKFSGKDGDVTITKDSIT-IFKEKRITNLYKMIGSVIAGAVSA 510
+ L TL+A+ YK+S G V ++K S+ + + NLY + GS + G+V+A
Sbjct: 363 ISLSTLDAEGYKYSSSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTA 415
Score = 32.0 bits (71), Expect(2) = 6e-16
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 CHKYKEFMKKLGKNSDGASGKDD-QAGVVEELE--DPYNSLTAESGRDVYIDTWLFDTEC 172
C K F+++ K + K D +A VV E D + L +G D W+ DT C
Sbjct: 239 CKKKNHFIEECWKLQNKEKRKSDGKASVVTSAENSDSGDCLVVFAGCVASHDEWILDTAC 298
Query: 173 SYHV 184
S+H+
Sbjct: 299 SFHI 302
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 78.2 bits (191), Expect(2) = 2e-15
Identities = 42/112 (37%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Frame = +1
Query: 184 VQGEWFSTYTSVE-GNLVLKGND-VCQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
+ +WFS+Y SV+ G++V GND ++V IG++ +K HDG TL ++ H+ + +N++
Sbjct: 304 INRDWFSSYKSVQNGDVVRMGNDNPREIVGIGSVQIKTHDGITRTLKDVRHIPGMARNLI 363
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSIT-IFKEKRITNLYKMIGSVIAGAVSA 510
L TL+A+ YK+SG G V ++K S+ + + NLY + GS + G+V+A
Sbjct: 364 SLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTA 415
Score = 30.8 bits (68), Expect(2) = 2e-15
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 CHKYKEFMKKLGKNSDGASGKDD-QAGVVEELE--DPYNSLTAESGRDVYIDTWLFDTEC 172
C K F+K+ K + K D +A VV + D + L +G D W+ DT C
Sbjct: 239 CKKKIHFIKECWKLQNKEKRKSDGKASVVTSAKNSDSGDCLVVFAGCVASHDEWILDTAC 298
Query: 173 SYHV 184
S+H+
Sbjct: 299 SFHI 302
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 80.5 bits (197), Expect(2) = 5e-15
Identities = 42/113 (37%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Frame = +1
Query: 181 CVQGEWFSTYTSVE-GNLVLKGND-VCQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNV 354
C+ +WFS+Y SV+ G++V G+D ++V IG++ +K HDG TL ++ H+ + +N+
Sbjct: 198 CINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPRMARNL 257
Query: 355 LLLGTLEAQKYKFSGKDGDVTITKDSIT-IFKEKRITNLYKMIGSVIAGAVSA 510
+ L TL+A+ YK+SG G V ++K S+ + + NLY + GS + G V+A
Sbjct: 258 ISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGYVTA 310
Score = 26.9 bits (58), Expect(2) = 5e-15
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Frame = +2
Query: 2 CHKYKEFMKKLGKNSDGASGKDD-QAGVVEELEDPYNSLTAESGRDVYI--------DTW 154
C K F+++ K + K D +A VV ++ ++SG + + D W
Sbjct: 134 CKKKNHFIEECWKLQNKEKRKSDGKASVVTSADN------SDSGDCLVVFVVCVSSHDEW 187
Query: 155 LFDTECSYHV 184
+ DT CS+H+
Sbjct: 188 ILDTTCSFHI 197
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 78.6 bits (192), Expect(2) = 6e-15
Identities = 41/113 (36%), Positives = 73/113 (64%), Gaps = 3/113 (2%)
Frame = +1
Query: 181 CVQGEWFSTYTSVE-GNLVLKGND-VCQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNV 354
C+ +WFS+Y SV+ G++V G+D ++V IG++ +K HDG TL ++ ++ + +N+
Sbjct: 253 CINRDWFSSYKSVQNGDVVRMGDDNPHEIVGIGSVQIKTHDGMTRTLKDVRYIPGMARNL 312
Query: 355 LLLGTLEAQKYKFSGKDGDVTITKDSIT-IFKEKRITNLYKMIGSVIAGAVSA 510
+ L TL+A+ YK+SG G V ++K S+ + + NLY + GS + G+V+A
Sbjct: 313 ISLSTLDAEGYKYSGLGGVVKVSKGSLVYMISDMNSANLYVLRGSTLHGSVTA 365
Score = 28.5 bits (62), Expect(2) = 6e-15
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 65 DDQAGVVEELE--DPYNSLTAESGRDVYIDTWLFDTECSYHV 184
D +A VV E D + L +G D W+ DT CS+H+
Sbjct: 211 DGKASVVTSAENSDSGDCLVVFAGCVASHDEWILDTACSFHI 252
>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
Japonica Group]
Length = 759
Score = 76.3 bits (186), Expect(2) = 8e-15
Identities = 40/113 (35%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Frame = +1
Query: 181 CVQGEWFSTYTSVE-GNLVLKGNDVCQ-LVAIGNICMKMHDGQE*TLSNIGHVLELRKNV 354
C+ +WFS+Y SV+ G++V G+D + ++ IG++ +K HDG TL + H+ + +N+
Sbjct: 232 CINRDWFSSYKSVQNGDVVRMGDDNPRGIMGIGSVQIKTHDGMTRTLKDARHIPGMARNL 291
Query: 355 LLLGTLEAQKYKFSGKDGDVTITKDSIT-IFKEKRITNLYKMIGSVIAGAVSA 510
+ L TL+++ YK+SG G V ++K S+ + + NLY + GS + G+V+A
Sbjct: 292 ISLSTLDSEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTA 344
Score = 30.4 bits (67), Expect(2) = 8e-15
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 CHKYKEFMKKLGKNSDGASGK-DDQAGVVEELE--DPYNSLTAESGRDVYIDTWLFDTEC 172
C K F+++ K + K D +A VV + D + L +G D W+ DT C
Sbjct: 168 CKKKNHFIEECWKLQNKEKRKYDGKASVVTSADNSDSGDCLVVFAGCVASHDEWILDTAC 227
Query: 173 SYHV 184
S+H+
Sbjct: 228 SFHI 231
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 82.8 bits (203), Expect(2) = 3e-14
Identities = 37/98 (37%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +1
Query: 181 CVQGEWFSTYTSVEGNLVLKGNDV-CQLVAIGNICMKMHDGQE*TLSNIGHVLELRKNVL 357
C + +WFS+Y V G +L GN++ C +V IG + + MHDG+ TL + HV +L++N++
Sbjct: 189 CPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMAINMHDGKTRTLKEVRHVPDLKRNLI 248
Query: 358 LLGTLEAQKYKFSGKDGDVTITKDSITIFKEKRITNLY 471
LGTL+ Y F K+G +TI+K ++ + K ++ L+
Sbjct: 249 SLGTLDKSGYNFKAKNGKLTISKXAMVVMKGQKRNGLH 286
Score = 21.9 bits (45), Expect(2) = 3e-14
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 62 KDDQAGVVEELEDPYNSLTAESGR-DVYIDTWLFDTECSYHV 184
K G ++D Y+S + R + + W+ D+ C+YH+
Sbjct: 147 KTQAQGSAAIIDDGYDSTEVLTIRLNPNHEEWVLDSGCTYHM 188