BLASTX nr result

ID: Ophiopogon21_contig00012518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00012518
         (594 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008783465.1| PREDICTED: U1 small nuclear ribonucleoprotei...    89   2e-15
ref|XP_009381289.1| PREDICTED: U1 small nuclear ribonucleoprotei...    71   5e-10
ref|XP_010919474.1| PREDICTED: U1 small nuclear ribonucleoprotei...    69   2e-09
ref|XP_010933717.1| PREDICTED: U1 small nuclear ribonucleoprotei...    65   2e-08
ref|XP_010933716.1| PREDICTED: U1 small nuclear ribonucleoprotei...    65   2e-08
ref|XP_009407689.1| PREDICTED: U1 small nuclear ribonucleoprotei...    61   4e-07
ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [S...    59   2e-06

>ref|XP_008783465.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix
           dactylifera] gi|672120404|ref|XP_008783466.1| PREDICTED:
           U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix
           dactylifera]
          Length = 512

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 6/82 (7%)
 Frame = -1

Query: 588 HGHEHDYDQ-----NEGRYDHLQPHGPSETEHDRQRVKRHEPEYYDDQYGKVQV-GYRGQ 427
           HG+EH+YDQ     ++ +YDHLQPHG +E E+  +R KRHEPEYYD  Y + Q+  Y  Q
Sbjct: 418 HGNEHNYDQYQQSRHQKQYDHLQPHGLAEPENTGERSKRHEPEYYDKTYDEGQLDSYPRQ 477

Query: 426 FEHEDPEAREEGEAVAEHDYAY 361
           + H D E REEGEAV + D+ Y
Sbjct: 478 YGHVDSEPREEGEAVDDQDFGY 499


>ref|XP_009381289.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Musa
           acuminata subsp. malaccensis]
          Length = 510

 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
 Frame = -1

Query: 588 HGHEHDYDQ--NEGRYDHLQPHGPSETEHDRQRVKRHEPEYYD-DQYGKVQVG-YRGQFE 421
           HGHE DY Q     +YD +Q  G  E EH+++R  RHE +YYD   Y K Q G Y  Q+ 
Sbjct: 419 HGHERDYKQFDQSQQYDRVQHQGVVEPEHEQERPSRHEGDYYDRAPYDKGQAGDYHHQYG 478

Query: 420 HEDPEAREEGEAVAEHDYAY 361
           + D EAREEGEAV + DY Y
Sbjct: 479 YADYEAREEGEAVGD-DYGY 497


>ref|XP_010919474.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Elaeis
           guineensis]
          Length = 520

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
 Frame = -1

Query: 588 HGHEHDY-----DQNEGRYDHLQPHGPSETEHDRQRVKRHEPEYYDD-QYGKVQ-VGYRG 430
           HG EHDY      +N+ +YD+ + HG  + +HD +  +RH+ EYYD   Y KV  V Y  
Sbjct: 425 HGQEHDYYRYEQQRNQEQYDYQEHHGLGDPQHDLEHPRRHDHEYYDHAPYDKVDPVNYHS 484

Query: 429 QFEHEDPEAREEGEAVAEHDYAY 361
           +F     E+REEGEA  + DY +
Sbjct: 485 EFNRAGSESREEGEAFGDQDYEH 507


>ref|XP_010933717.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X2 [Elaeis guineensis]
          Length = 475

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = -1

Query: 588 HGHEHDY----DQNEGRYDHLQPHGPSETEHDRQRVKRHEPEYYDD-QYGKVQ-VGYRGQ 427
           HG+EHDY     +N+ +YD  Q HG  + ++D +R +R + EY++   Y KV  V Y GQ
Sbjct: 396 HGNEHDYPFEQQRNQEQYD-FQLHGLGDPQNDSERSRRQDHEYHNHVPYDKVDHVNYHGQ 454

Query: 426 FEHEDPEAREEGEAVAEHDY 367
           F H + E+REEGEA  + DY
Sbjct: 455 FNHVESESREEGEAFGDQDY 474


>ref|XP_010933716.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X1 [Elaeis guineensis]
          Length = 500

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = -1

Query: 588 HGHEHDY----DQNEGRYDHLQPHGPSETEHDRQRVKRHEPEYYDD-QYGKVQ-VGYRGQ 427
           HG+EHDY     +N+ +YD  Q HG  + ++D +R +R + EY++   Y KV  V Y GQ
Sbjct: 421 HGNEHDYPFEQQRNQEQYD-FQLHGLGDPQNDSERSRRQDHEYHNHVPYDKVDHVNYHGQ 479

Query: 426 FEHEDPEAREEGEAVAEHDY 367
           F H + E+REEGEA  + DY
Sbjct: 480 FNHVESESREEGEAFGDQDY 499


>ref|XP_009407689.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Musa
           acuminata subsp. malaccensis]
          Length = 505

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
 Frame = -1

Query: 588 HGHEHDYDQNEG-----RYDHLQPHGPSETEHDRQRVKRHEPEYYDDQYGKVQVGYRGQF 424
           HG E DY Q +       YD + P   SE +++R +  RHE +YY D   +   G+  Q+
Sbjct: 425 HGRERDYKQFDQSQQYEHYDRVHPQHISEAKYERDQSNRHEGDYYYDNALQTD-GHHHQY 483

Query: 423 EHEDPEAREEGEAVAEHDYAY 361
           EH D EAREEGEAV + +Y Y
Sbjct: 484 EHPDYEAREEGEAVGD-EYGY 503


>ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
           gi|241918656|gb|EER91800.1| hypothetical protein
           SORBIDRAFT_01g026920 [Sorghum bicolor]
          Length = 486

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
 Frame = -1

Query: 588 HGHEHDYDQNEGRYDH-LQPHGPSETEHDRQRVKRHEPEYYD-DQYGKVQVGYRGQFEHE 415
           +G ++ Y Q E    H    +G     H+ +  KRHE EYY  D YGK++  Y+ Q  + 
Sbjct: 401 YGQDYGYGQYEQHKGHDAYGYGQDGRRHETEHSKRHEHEYYRVDSYGKMEANYQMQPNNA 460

Query: 414 DPEAREEGEAVAEHDYAY 361
           +PE  EEGEA  E DY Y
Sbjct: 461 EPEGPEEGEAYEEGDYQY 478


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