BLASTX nr result
ID: Ophiopogon21_contig00012435
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon21_contig00012435 (2334 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009403000.1| PREDICTED: DNA topoisomerase 3-alpha [Musa a... 1165 0.0 ref|XP_008807898.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1154 0.0 gb|AIC82458.1| topoisomerase 3alpha [Cocos nucifera] 1150 0.0 ref|XP_010907414.1| PREDICTED: DNA topoisomerase 3-alpha [Elaeis... 1145 0.0 ref|XP_008807899.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1144 0.0 ref|XP_010270299.1| PREDICTED: DNA topoisomerase 3-alpha [Nelumb... 1117 0.0 ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1109 0.0 ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1105 0.0 ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1097 0.0 ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha [Cicer ... 1092 0.0 ref|XP_012489371.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1091 0.0 gb|KNA10476.1| hypothetical protein SOVF_143990 [Spinacia oleracea] 1085 0.0 ref|XP_012489370.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1084 0.0 ref|XP_010674423.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1083 0.0 ref|XP_010674422.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1083 0.0 ref|XP_012489369.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1080 0.0 ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [The... 1079 0.0 ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca... 1079 0.0 ref|XP_012489368.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 1077 0.0 gb|KQK23486.1| hypothetical protein BRADI_1g74120 [Brachypodium ... 1075 0.0 >ref|XP_009403000.1| PREDICTED: DNA topoisomerase 3-alpha [Musa acuminata subsp. malaccensis] Length = 920 Score = 1165 bits (3015), Expect = 0.0 Identities = 569/776 (73%), Positives = 637/776 (82%), Gaps = 19/776 (2%) Frame = -2 Query: 2273 GRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFT 2094 G +RVLNVAEKPSVAK +S IL YNR+FEFEYT+ SQ CHM+ T Sbjct: 7 GGRMIRVLNVAEKPSVAKAVSEILSRGSGGMRSRLGRSRYNRVFEFEYTIGSQACHMLVT 66 Query: 2093 SVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWL 1914 SV GHLMEL+FE+R+RKWHSCDPAELY AP++K VPQDKLDI+ TLEEEAR+CQWLVLWL Sbjct: 67 SVIGHLMELEFEDRFRKWHSCDPAELYHAPVRKHVPQDKLDIKITLEEEARRCQWLVLWL 126 Query: 1913 DGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDAR 1734 D D EGENIAFEVIEVCT+VN H+ IWRA FS++ +R+I+ SVQ+L +PNKL +D+VDAR Sbjct: 127 DCDREGENIAFEVIEVCTSVNDHLNIWRAHFSALIDREIHHSVQNLARPNKLFSDAVDAR 186 Query: 1733 QEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHE 1554 QEIDLRIGASFTRFQTMLLKD FVLDFA D+RS+VLSYGPCQFPTLGF+VERYWEIQSHE Sbjct: 187 QEIDLRIGASFTRFQTMLLKDLFVLDFASDNRSLVLSYGPCQFPTLGFIVERYWEIQSHE 246 Query: 1553 PEEFWKXXXXXSC-------------------AGIIYEMCVEEPTATVKNVCHKESLKYP 1431 EEFW + A +IYEMCVEEP ATVKNV H+E LKYP Sbjct: 247 AEEFWTINCSHTSEEGTANFIWMRGHLFDYTSAVVIYEMCVEEPAATVKNVKHQEKLKYP 306 Query: 1430 PYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQ 1251 PYPLST+ELQKRASR RMSS+HTMK+AEELY +GFISYPRTETD FS N DL IVREQ Sbjct: 307 PYPLSTVELQKRASRFFRMSSEHTMKIAEELYQAGFISYPRTETDGFSVNTDLHAIVREQ 366 Query: 1250 IGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELV 1071 + HP WGSYAQQLLD E RLWRNP NGGHDDKAHPPIHPTKFSAGE+GWS+DHNRLYELV Sbjct: 367 VTHPIWGSYAQQLLDVEARLWRNPSNGGHDDKAHPPIHPTKFSAGETGWSQDHNRLYELV 426 Query: 1070 VRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIG 891 VRHFLACVSQPAVGA TTV+IDIAGEQFSASG VII +NYLDVY ++SW G+I+PTY IG Sbjct: 427 VRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFESWGGNIVPTYTIG 486 Query: 890 QQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRS 711 QQF+PT+L L+SGVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR YATKDS + Sbjct: 487 QQFIPTSLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDSNT 546 Query: 710 QFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVF 531 +FSPTNLGEALVMGYD+MGYELWKPYLRA ME DMK VS GTKRKS+ L SCLQ++K F Sbjct: 547 RFSPTNLGEALVMGYDEMGYELWKPYLRAMMECDMKAVSIGTKRKSEVLESCLQQMKACF 606 Query: 530 LDARRQKVNLLEAMELFFERSNRPVGDGQNAGEVVRPCNACHESHMVLKRRLNGDFMAGC 351 LDARR KV LLEAM LFFERS GD N GE VRPC+ C E+ MVLKRRLNGD+M GC Sbjct: 607 LDARRNKVKLLEAMGLFFERS---AGDAHNVGETVRPCSLCSEADMVLKRRLNGDYMVGC 663 Query: 350 LNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGG 171 L FP+CRNVVWLPG+ISEA+VT +VCSSCAPGPV+K+Q KFRRLEIPPNYDVDHLGCIGG Sbjct: 664 LRFPNCRNVVWLPGSISEAAVTNHVCSSCAPGPVYKVQFKFRRLEIPPNYDVDHLGCIGG 723 Query: 170 CDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 CD IL++LIEICGTGS TGM+ARGQR E + R N RQ+ C HC QTGHSS Sbjct: 724 CDVILRELIEICGTGSHNHTGMSARGQRGTEPMSSASRGNSRQEPCLHCGQTGHSS 779 >ref|XP_008807898.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Phoenix dactylifera] Length = 920 Score = 1154 bits (2986), Expect = 0.0 Identities = 558/776 (71%), Positives = 637/776 (82%), Gaps = 19/776 (2%) Frame = -2 Query: 2273 GRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFT 2094 GR +RVLNVAEKPSVAK ++ IL YNR+FEFEY + Q CHM+ T Sbjct: 6 GRGRIRVLNVAEKPSVAKAVAEILSRRGGGFRSREGRSRYNRVFEFEYAIGPQLCHMLVT 65 Query: 2093 SVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWL 1914 SVTGHLMEL+F++R+RKWHSCDPA+LY A ++K VPQDKLDI+RTLEEEAR CQWLVLWL Sbjct: 66 SVTGHLMELEFDDRFRKWHSCDPADLYHAAVRKHVPQDKLDIKRTLEEEARSCQWLVLWL 125 Query: 1913 DGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDAR 1734 D D EGENIAFEV+EVCT++N + +WRA FS++ +R+I+ +VQ+L +PNKL AD+VD R Sbjct: 126 DCDREGENIAFEVMEVCTSINHRLNVWRAHFSALIDREIHEAVQNLGRPNKLFADAVDVR 185 Query: 1733 QEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHE 1554 QEIDLRIGASFTRFQTMLL+DAFVLDFAGDDR+VVLSYGPCQFPTLGF+VERYWEIQSHE Sbjct: 186 QEIDLRIGASFTRFQTMLLRDAFVLDFAGDDRNVVLSYGPCQFPTLGFIVERYWEIQSHE 245 Query: 1553 PEEFWKXXXXXSC-------------------AGIIYEMCVEEPTATVKNVCHKESLKYP 1431 PEEFW + A I+YEMCVEE TATV NV ++E LKYP Sbjct: 246 PEEFWTINCSHTSDEGTTTFSWMRGHLFDYTSAVIVYEMCVEESTATVMNVRNQEKLKYP 305 Query: 1430 PYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQ 1251 PYPLST+ELQKRASR RMSS+HTMKVAEELY +G+ISYPRTETDSFS N DL IV EQ Sbjct: 306 PYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGYISYPRTETDSFSVNTDLHAIVGEQ 365 Query: 1250 IGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELV 1071 +GHP WGSYAQ+LLDPE LWRNP NGGH+DKAHPPIHPTKFSAGE GWS+DHNRLYELV Sbjct: 366 VGHPAWGSYAQRLLDPEASLWRNPSNGGHNDKAHPPIHPTKFSAGEPGWSQDHNRLYELV 425 Query: 1070 VRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIG 891 VRHFLACVS+PAVGA TTV+IDIAGEQFSASG VII +NYLDVY ++SW G+I+PTY IG Sbjct: 426 VRHFLACVSKPAVGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFESWGGTILPTYTIG 485 Query: 890 QQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRS 711 QQF+PTTL L+SGVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR YATKDS + Sbjct: 486 QQFIPTTLTLDSGVTRPPQLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDSDT 545 Query: 710 QFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVF 531 +FSPTNLGEALVMGYD+MGYELWKP+LR+ ME DMK VS G+KRKS+ L CLQ++K F Sbjct: 546 RFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSIGSKRKSEVLEGCLQQMKACF 605 Query: 530 LDARRQKVNLLEAMELFFERSNRPVGDGQNAGEVVRPCNACHESHMVLKRRLNGDFMAGC 351 LDAR +V L EAMELFFERSNR D N GE VRPC++CHES MVLKRR +GDFM GC Sbjct: 606 LDARLNRVKLFEAMELFFERSNRSGADTNNIGETVRPCDSCHESDMVLKRRPSGDFMVGC 665 Query: 350 LNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGG 171 L FP CRNVVWLPG+ISEA+VT+ VC +CAPGPVF IQ KFRRLEIPPNYDVDHLGCIGG Sbjct: 666 LRFPLCRNVVWLPGSISEAAVTSEVCPTCAPGPVFLIQFKFRRLEIPPNYDVDHLGCIGG 725 Query: 170 CDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 CD L++L EICGTGSR TGMTAR QR+ E P+ TRR N RQD+C +CR+TGHSS Sbjct: 726 CDVALRELAEICGTGSRNNTGMTARAQRSTEPPSSTRRGNSRQDSCMYCRRTGHSS 781 >gb|AIC82458.1| topoisomerase 3alpha [Cocos nucifera] Length = 916 Score = 1150 bits (2974), Expect = 0.0 Identities = 558/776 (71%), Positives = 633/776 (81%), Gaps = 19/776 (2%) Frame = -2 Query: 2273 GRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFT 2094 GR +RVLNVAEKPSVAK +S IL YNR+FEFEY + CHM+ T Sbjct: 6 GRGRIRVLNVAEKPSVAKAVSEILSRGGGGFRSREGRSRYNRVFEFEYAIGPHLCHMLVT 65 Query: 2093 SVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWL 1914 SVTGHLMELDF++R+RKWHSCDPA+LY AP++K+VPQDKLDI+RTLEEEAR CQWLVLWL Sbjct: 66 SVTGHLMELDFDDRFRKWHSCDPADLYDAPVRKYVPQDKLDIKRTLEEEARSCQWLVLWL 125 Query: 1913 DGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDAR 1734 D D EGENIAFEV+EVCT++N + +WRA FS++ ER+I +VQ+L +PNKL AD+VD R Sbjct: 126 DCDREGENIAFEVVEVCTSINHRLNVWRAHFSALIEREIREAVQNLGRPNKLFADAVDVR 185 Query: 1733 QEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHE 1554 QEIDLRIGASFTRFQTMLL+DAFVLDFAGDDR+VVLSYGPCQFPTLGF+VERYWEIQSHE Sbjct: 186 QEIDLRIGASFTRFQTMLLRDAFVLDFAGDDRNVVLSYGPCQFPTLGFIVERYWEIQSHE 245 Query: 1553 PEEFWKXXXXXSC-------------------AGIIYEMCVEEPTATVKNVCHKESLKYP 1431 PEEFW + A I+YEMCVEEPTATV NV ++E LKYP Sbjct: 246 PEEFWTINCSHTSDEGTAAFSWMRGHLFDYTSAVIVYEMCVEEPTATVMNVRNQEKLKYP 305 Query: 1430 PYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQ 1251 PYPL+T+ELQKRASR RMSS+HTMKVAEELY +G+ISYPRTETD FS N DL IV EQ Sbjct: 306 PYPLNTVELQKRASRYFRMSSEHTMKVAEELYQAGYISYPRTETDKFSENTDLHAIVGEQ 365 Query: 1250 IGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELV 1071 +GHP WGSYAQ+LLDPE RLWRNPGNGGHDDKAHPPIHPTKFSAGE WS+DHNRLYELV Sbjct: 366 VGHPAWGSYAQRLLDPEARLWRNPGNGGHDDKAHPPIHPTKFSAGEPRWSQDHNRLYELV 425 Query: 1070 VRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIG 891 VRHFLACVSQPAVGA TTV+IDIAGEQFSASG VII +NYLDVY ++SW G+I+PTY IG Sbjct: 426 VRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFESWGGTILPTYTIG 485 Query: 890 QQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRS 711 QQF+PTTL L+SGVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR YATKDS + Sbjct: 486 QQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDSNT 545 Query: 710 QFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVF 531 +FSPTNLGEALVMGYD+MGYELWKP+LR+ ME DMK VS GTKRK + L CLQ++K F Sbjct: 546 RFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSMGTKRKFEVLEGCLQQMKACF 605 Query: 530 LDARRQKVNLLEAMELFFERSNRPVGDGQNAGEVVRPCNACHESHMVLKRRLNGDFMAGC 351 LDA+ +V LLEAM LFFERSNR D N GE VRPC+ CHES MVLKRR NGDFM GC Sbjct: 606 LDAKLNRVKLLEAMGLFFERSNRSGADPHNVGETVRPCDLCHESDMVLKRRPNGDFMVGC 665 Query: 350 LNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGG 171 L FP CRNVVWLPG+ISEA+V++ VC +CAPGPV IQ KFRRLEIPPNYDVDHLGCIGG Sbjct: 666 LRFPLCRNVVWLPGSISEAAVSSQVCPTCAPGPVSLIQFKFRRLEIPPNYDVDHLGCIGG 725 Query: 170 CDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 CD L++L EICGTGSR TARGQR+ E P+ TR+ N RQD+C +CR+TGHSS Sbjct: 726 CDVTLRELAEICGTGSR---NNTARGQRSTEPPSSTRQGNSRQDSCMYCRRTGHSS 778 >ref|XP_010907414.1| PREDICTED: DNA topoisomerase 3-alpha [Elaeis guineensis] Length = 917 Score = 1145 bits (2962), Expect = 0.0 Identities = 557/776 (71%), Positives = 632/776 (81%), Gaps = 19/776 (2%) Frame = -2 Query: 2273 GRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFT 2094 GR +RVLNVAEKPSVAK +S IL YNR+FEFEY + Q CHM+ T Sbjct: 6 GRGRIRVLNVAEKPSVAKAVSEILSRRGGGFRSREGRSRYNRVFEFEYAIGPQLCHMLVT 65 Query: 2093 SVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWL 1914 SVTGHLMELDF++R+RKWHSCDPA+LY AP++K VPQDKLDI+RTLEEEAR CQWLVLWL Sbjct: 66 SVTGHLMELDFDDRFRKWHSCDPADLYDAPVRKNVPQDKLDIKRTLEEEARSCQWLVLWL 125 Query: 1913 DGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDAR 1734 D D EGENIAFEV+EVCT++N + +WRA FS++ +R+I+ +VQ+L +PNKL AD+VDAR Sbjct: 126 DCDREGENIAFEVMEVCTSINHRLNVWRAHFSALIDREIHEAVQNLGRPNKLFADAVDAR 185 Query: 1733 QEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHE 1554 QEIDLRIGASFTRFQTMLL+DAFVLDFAGDDR+VVLSYGPCQFPTLGF+VERYWEIQSHE Sbjct: 186 QEIDLRIGASFTRFQTMLLRDAFVLDFAGDDRNVVLSYGPCQFPTLGFIVERYWEIQSHE 245 Query: 1553 PEEFWKXXXXXSC-------------------AGIIYEMCVEEPTATVKNVCHKESLKYP 1431 PEEFW + A I YEMCVEEPTATV V ++E LKYP Sbjct: 246 PEEFWTINCSHTSDEGTAAFSWMRGHLFDYTSAVIAYEMCVEEPTATVMTVRNQEKLKYP 305 Query: 1430 PYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQ 1251 PYPLST+ELQKRASR RMS++HTMKVAEELY +G+ISYPRTETD+FS N DL IV EQ Sbjct: 306 PYPLSTVELQKRASRYFRMSAEHTMKVAEELYQAGYISYPRTETDNFSANTDLHAIVGEQ 365 Query: 1250 IGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELV 1071 +GHP WGSYAQ+LLDPE RLWRNP NGGHDDKAHPPIHPTKF AGE GWS++HNRLYELV Sbjct: 366 VGHPAWGSYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFFAGEPGWSQNHNRLYELV 425 Query: 1070 VRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIG 891 VRHFLACVSQPAVGA TTV+IDIAGEQF ASG VII +NYLDVY ++SW G+I+PTY IG Sbjct: 426 VRHFLACVSQPAVGAETTVEIDIAGEQFFASGRVIIAKNYLDVYRFESWGGTILPTYTIG 485 Query: 890 QQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRS 711 QQF+PTTL L+SGVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR YATKDS + Sbjct: 486 QQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDSNT 545 Query: 710 QFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVF 531 +FSPTNLGEALVMGYD+MGYELWKP+LR+ ME DMK VS G KRKS+ L CLQ++K F Sbjct: 546 RFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSLGAKRKSEVLEGCLQQMKACF 605 Query: 530 LDARRQKVNLLEAMELFFERSNRPVGDGQNAGEVVRPCNACHESHMVLKRRLNGDFMAGC 351 LDAR +V LLEAM LFFERSNR D N GE VR C+ CHES MVLKRR NGDFM GC Sbjct: 606 LDARLNRVKLLEAMGLFFERSNRSGADTHNIGETVRSCDLCHESDMVLKRRPNGDFMVGC 665 Query: 350 LNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGG 171 L FP CRNVVWLPG+ISEA+V++ VC +CAPGPVF IQ KFRRLEIPPNYDVDHLGCIGG Sbjct: 666 LRFPLCRNVVWLPGSISEAAVSSQVCPTCAPGPVFLIQFKFRRLEIPPNYDVDHLGCIGG 725 Query: 170 CDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 CD L++L EICGTGSR TARGQR+ E P+ TRR N RQD+C +CR+TGHSS Sbjct: 726 CDVTLRELAEICGTGSR---NNTARGQRSTEPPSSTRRGNSRQDSCMYCRRTGHSS 778 >ref|XP_008807899.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Phoenix dactylifera] Length = 917 Score = 1144 bits (2958), Expect = 0.0 Identities = 555/776 (71%), Positives = 634/776 (81%), Gaps = 19/776 (2%) Frame = -2 Query: 2273 GRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFT 2094 GR +RVLNVAEKPSVAK ++ IL YNR+FEFEY + Q CHM+ T Sbjct: 6 GRGRIRVLNVAEKPSVAKAVAEILSRRGGGFRSREGRSRYNRVFEFEYAIGPQLCHMLVT 65 Query: 2093 SVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWL 1914 SVTGHLMEL+F++R+RKWHSCDPA+LY A ++K VPQDKLDI+RTLEEEAR CQWLVLWL Sbjct: 66 SVTGHLMELEFDDRFRKWHSCDPADLYHAAVRKHVPQDKLDIKRTLEEEARSCQWLVLWL 125 Query: 1913 DGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDAR 1734 D D EGENIAFEV+EVCT++N + +WRA FS++ +R+I+ +VQ+L +PNKL AD+VD R Sbjct: 126 DCDREGENIAFEVMEVCTSINHRLNVWRAHFSALIDREIHEAVQNLGRPNKLFADAVDVR 185 Query: 1733 QEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHE 1554 QEIDLRIGASFTRFQTMLL+DAFVLDFAGDDR+VVLSYGPCQFPTLGF+VERYWEIQSHE Sbjct: 186 QEIDLRIGASFTRFQTMLLRDAFVLDFAGDDRNVVLSYGPCQFPTLGFIVERYWEIQSHE 245 Query: 1553 PEEFWKXXXXXSC-------------------AGIIYEMCVEEPTATVKNVCHKESLKYP 1431 PEEFW + A I+YEMCVEE TATV NV ++E LKYP Sbjct: 246 PEEFWTINCSHTSDEGTTTFSWMRGHLFDYTSAVIVYEMCVEESTATVMNVRNQEKLKYP 305 Query: 1430 PYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQ 1251 PYPLST+ELQKRASR RMSS+HTMKVAEELY +G+ISYPRTETDSFS N DL IV EQ Sbjct: 306 PYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGYISYPRTETDSFSVNTDLHAIVGEQ 365 Query: 1250 IGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELV 1071 +GHP WGSYAQ+LLDPE LWRNP NGGH+DKAHPPIHPTKFSAGE GWS+DHNRLYELV Sbjct: 366 VGHPAWGSYAQRLLDPEASLWRNPSNGGHNDKAHPPIHPTKFSAGEPGWSQDHNRLYELV 425 Query: 1070 VRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIG 891 VRHFLACVS+PAVGA TTV+IDIAGEQFSASG VII +NYLDVY ++SW G+I+PTY IG Sbjct: 426 VRHFLACVSKPAVGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFESWGGTILPTYTIG 485 Query: 890 QQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRS 711 QQF+PTTL L+SGVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR YATKDS + Sbjct: 486 QQFIPTTLTLDSGVTRPPQLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDSDT 545 Query: 710 QFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVF 531 +FSPTNLGEALVMGYD+MGYELWKP+LR+ ME DMK VS G+KRKS+ L CLQ++K F Sbjct: 546 RFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSIGSKRKSEVLEGCLQQMKACF 605 Query: 530 LDARRQKVNLLEAMELFFERSNRPVGDGQNAGEVVRPCNACHESHMVLKRRLNGDFMAGC 351 LDAR +V L EAMELFFERSNR D N GE VRPC++CHES MVLKRR +GDFM GC Sbjct: 606 LDARLNRVKLFEAMELFFERSNRSGADTNNIGETVRPCDSCHESDMVLKRRPSGDFMVGC 665 Query: 350 LNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGG 171 L FP CRNVVWLPG+ISEA+VT+ VC +CAPGPVF IQ KFRRLEIPPNYDVDHLGCIGG Sbjct: 666 LRFPLCRNVVWLPGSISEAAVTSEVCPTCAPGPVFLIQFKFRRLEIPPNYDVDHLGCIGG 725 Query: 170 CDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 CD L++L EICGTGSR TAR QR+ E P+ TRR N RQD+C +CR+TGHSS Sbjct: 726 CDVALRELAEICGTGSR---NNTARAQRSTEPPSSTRRGNSRQDSCMYCRRTGHSS 778 >ref|XP_010270299.1| PREDICTED: DNA topoisomerase 3-alpha [Nelumbo nucifera] Length = 921 Score = 1117 bits (2889), Expect = 0.0 Identities = 543/778 (69%), Positives = 631/778 (81%), Gaps = 20/778 (2%) Frame = -2 Query: 2276 AGRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVF 2097 AGR+ VRVLNVAEKPSVAK ++ IL +NRIFEF+Y++R Q CHM+F Sbjct: 3 AGRT-VRVLNVAEKPSVAKAVAGILSRNQGLRVRNGRSR-FNRIFEFDYSIRGQHCHMLF 60 Query: 2096 TSVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLW 1917 TSVTGHLMEL+FEERYRKWHSCDPA+LY AP++KFVPQDKLDI+RTLEEEARKCQWLVLW Sbjct: 61 TSVTGHLMELEFEERYRKWHSCDPADLYHAPVRKFVPQDKLDIKRTLEEEARKCQWLVLW 120 Query: 1916 LDGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDA 1737 LD D EGENIAFEV+E+C+A N H+ IWRA FS++ +R+I+ SVQ+L +PN+L AD+VDA Sbjct: 121 LDCDREGENIAFEVVEICSAANNHLNIWRARFSALIDREIHESVQNLVRPNQLFADAVDA 180 Query: 1736 RQEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSH 1557 RQEIDLRIGASFTRFQTMLLKDAFV+DFA DDR++VLSYGPCQFPTLGFVVERYWEIQ+H Sbjct: 181 RQEIDLRIGASFTRFQTMLLKDAFVIDFATDDRNLVLSYGPCQFPTLGFVVERYWEIQAH 240 Query: 1556 EPEEFWKXXXXXSC-------------------AGIIYEMCVEEPTATVKNVCHKESLKY 1434 EPEEFW + A IIYEMC EPTATV V ++E LKY Sbjct: 241 EPEEFWTINCSHTLDEGIATFNWMRGHIFDYTYAVIIYEMCTLEPTATVTKVKNQEKLKY 300 Query: 1433 PPYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVRE 1254 PP+PL+T+EL+KRASR RMSS+HTMKVAEELY SGFISYPRTETD FS DL +V+E Sbjct: 301 PPHPLNTIELEKRASRYFRMSSEHTMKVAEELYQSGFISYPRTETDCFSARTDLHAMVQE 360 Query: 1253 QIGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYEL 1074 Q GHP WGSYAQ+LLDPE RLWR+P NGGHDDKAHPPIHPTK+SAGESGWS+DH+RLYEL Sbjct: 361 QQGHPLWGSYAQRLLDPEARLWRSPSNGGHDDKAHPPIHPTKYSAGESGWSQDHHRLYEL 420 Query: 1073 VVRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVI 894 VVRHFLACVSQPA+GA T V+IDIAGEQFS SG VI+++NYLDVY ++SW GS+IPTY + Sbjct: 421 VVRHFLACVSQPAIGAETIVEIDIAGEQFSVSGRVILQKNYLDVYRFESWGGSMIPTYSV 480 Query: 893 GQQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSR 714 GQQF+PT L L+SGVTRPP LL+E +L++ M KAGIGTDAT DHIKKLLDR YATKDS Sbjct: 481 GQQFIPTALTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRCYATKDSN 540 Query: 713 SQFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQV 534 ++FSPTNLGEALVMGYDDMGYELWKPYLR+ ME DMK VS GTKRK++ L +CLQ++K Sbjct: 541 TRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKAEVLETCLQQMKAC 600 Query: 533 FLDARRQKVNLLEAMELFFERSNRP-VGDGQNAGEVVRPCNACHESHMVLKRRLNGDFMA 357 FLDAR KV LLEAM +FFER NRP + Q A ++VRPC+AC ES+MVLKR+ +G+FM Sbjct: 601 FLDARLNKVKLLEAMAIFFERCNRPGTNEQQGAVDIVRPCSACQESNMVLKRKPDGNFMV 660 Query: 356 GCLNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCI 177 GCL FP CRNVVWLPG+IS A+VT ++C SC+PGPVFKIQ KFRRLEIP +YDVDHLGCI Sbjct: 661 GCLGFPQCRNVVWLPGSISTATVTNHICDSCSPGPVFKIQFKFRRLEIPSDYDVDHLGCI 720 Query: 176 GGCDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 GGCD LK L EICGTGSR +ARG+ + +R + Q C HCRQTGHSS Sbjct: 721 GGCDETLKQLTEICGTGSRNPPSTSARGRGTTASSTNAQRVSTMQGVCEHCRQTGHSS 778 >ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Vitis vinifera] Length = 918 Score = 1109 bits (2868), Expect = 0.0 Identities = 534/773 (69%), Positives = 624/773 (80%), Gaps = 20/773 (2%) Frame = -2 Query: 2261 VRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFTSVTG 2082 ++VLNVAEKPSVAK ++TIL YN++FEF Y++R Q C MV TSV G Sbjct: 1 MKVLNVAEKPSVAKAVATILSRNQGLRVREGRSR-YNKLFEFNYSIRGQHCQMVVTSVIG 59 Query: 2081 HLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWLDGDS 1902 HLMEL+FE+R+RKWHSCDPA LY AP++KFVP+DKLDI+RTLEEEARKCQWLVLWLD D Sbjct: 60 HLMELEFEDRFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCDR 119 Query: 1901 EGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDARQEID 1722 EGENIAFEV+EVC VNRHI +WRA FS++ +R+I+ SVQ+L +PN+L AD+VD RQEID Sbjct: 120 EGENIAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEID 179 Query: 1721 LRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 1542 LRIGASFTRFQTMLL+DAFVLDFA DDR++VLSYGPCQFPTLGFVVERYWEIQSHEPEEF Sbjct: 180 LRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 239 Query: 1541 WKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLKYPPYPL 1419 W +CA IIYEMC++EPTATV V +E LKYPP+PL Sbjct: 240 WTINCSHKSDEGTSTFNWMRAHLFDYTCAVIIYEMCIQEPTATVTKVRQQEKLKYPPHPL 299 Query: 1418 STLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQIGHP 1239 +T+EL+KRASR MSS+HTMKVAE+LY +GFISYPRTETD FS DL GIV+EQ+GHP Sbjct: 300 NTIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSERTDLHGIVQEQLGHP 359 Query: 1238 TWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELVVRHF 1059 WGSYAQ+LLDP LWRNP NGGHDDKAHPPIHPTKFSAGESGWS+DH RLYELVVRHF Sbjct: 360 IWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVRHF 419 Query: 1058 LACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIGQQFL 879 LACVSQPAVGA T V+IDIAGE FS+SG VII +NYLDVY ++SW GS+IPTYV GQQF+ Sbjct: 420 LACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFI 479 Query: 878 PTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRSQFSP 699 PTTL L+SGVTRPP LL+E +L++ M KAGIGTDAT DHIKKLLDR+YATKDS ++FSP Sbjct: 480 PTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSP 539 Query: 698 TNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVFLDAR 519 TNLGEALVMGYDDMGYELWKPYLR+ ME DMK VS GTKR+++ L +CL+++K FLDAR Sbjct: 540 TNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDAR 599 Query: 518 RQKVNLLEAMELFFERSNRPVGDGQN-AGEVVRPCNACHESHMVLKRRLNGDFMAGCLNF 342 KV LLEAM LFFERSNR GD Q+ G+VVR C C ES MVL+R+ +G+FM GCL + Sbjct: 600 LNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCLGY 659 Query: 341 PHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGGCDS 162 P CRNVVWLPG+ISEA++TT C+ C PGPV+KIQ KFRRLEIPPNY++DHLGC+ GCD Sbjct: 660 PQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDE 719 Query: 161 ILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 IL+ L EICGTGSR+ + + ARG+ + + +R N RQ C HC QTGHSS Sbjct: 720 ILRQLTEICGTGSRICSTVPARGRGSNASSTNAQRSNTRQTACIHCSQTGHSS 772 >ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Vitis vinifera] Length = 919 Score = 1105 bits (2858), Expect = 0.0 Identities = 535/774 (69%), Positives = 624/774 (80%), Gaps = 21/774 (2%) Frame = -2 Query: 2261 VRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFTSVTG 2082 ++VLNVAEKPSVAK ++TIL YN++FEF Y++R Q C MV TSV G Sbjct: 1 MKVLNVAEKPSVAKAVATILSRNQGLRVREGRSR-YNKLFEFNYSIRGQHCQMVVTSVIG 59 Query: 2081 HLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWLDGDS 1902 HLMEL+FE+R+RKWHSCDPA LY AP++KFVP+DKLDI+RTLEEEARKCQWLVLWLD D Sbjct: 60 HLMELEFEDRFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCDR 119 Query: 1901 EGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDARQEID 1722 EGENIAFEV+EVC VNRHI +WRA FS++ +R+I+ SVQ+L +PN+L AD+VD RQEID Sbjct: 120 EGENIAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEID 179 Query: 1721 LRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 1542 LRIGASFTRFQTMLL+DAFVLDFA DDR++VLSYGPCQFPTLGFVVERYWEIQSHEPEEF Sbjct: 180 LRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 239 Query: 1541 WKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLKYPPYPL 1419 W +CA IIYEMC++EPTATV V +E LKYPP+PL Sbjct: 240 WTINCSHKSDEGTSTFNWMRAHLFDYTCAVIIYEMCIQEPTATVTKVRQQEKLKYPPHPL 299 Query: 1418 STLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQIGHP 1239 +T+EL+KRASR MSS+HTMKVAE+LY +GFISYPRTETD FS DL GIV+EQ+GHP Sbjct: 300 NTIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSERTDLHGIVQEQLGHP 359 Query: 1238 TWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELVVRHF 1059 WGSYAQ+LLDP LWRNP NGGHDDKAHPPIHPTKFSAGESGWS+DH RLYELVVRHF Sbjct: 360 IWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVRHF 419 Query: 1058 LACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIGQQFL 879 LACVSQPAVGA T V+IDIAGE FS+SG VII +NYLDVY ++SW GS+IPTYV GQQF+ Sbjct: 420 LACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFI 479 Query: 878 PTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRSQFSP 699 PTTL L+SGVTRPP LL+E +L++ M KAGIGTDAT DHIKKLLDR+YATKDS ++FSP Sbjct: 480 PTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSP 539 Query: 698 TNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVFLDAR 519 TNLGEALVMGYDDMGYELWKPYLR+ ME DMK VS GTKR+++ L +CL+++K FLDAR Sbjct: 540 TNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDAR 599 Query: 518 RQKVNLLEAMELFFERSNRPVGDGQN-AGEVVRPCNACHESHMVLKRRLNGDFMAGCLNF 342 KV LLEAM LFFERSNR GD Q+ G+VVR C C ES MVL+R+ +G+FM GCL + Sbjct: 600 LNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCLGY 659 Query: 341 PHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGGCDS 162 P CRNVVWLPG+ISEA++TT C+ C PGPV+KIQ KFRRLEIPPNY++DHLGC+ GCD Sbjct: 660 PQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDE 719 Query: 161 ILKDLIEICGTGSRM-ATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 IL+ L EICGTGSR+ +T ARG+ + + +R N RQ C HC QTGHSS Sbjct: 720 ILRQLTEICGTGSRICSTVPAARGRGSNASSTNAQRSNTRQTACIHCSQTGHSS 773 >ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Vitis vinifera] Length = 916 Score = 1097 bits (2837), Expect = 0.0 Identities = 533/774 (68%), Positives = 623/774 (80%), Gaps = 21/774 (2%) Frame = -2 Query: 2261 VRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFTSVTG 2082 ++VLNVAEKPSVAK ++TIL YN++FEF Y++R Q C MV TSV G Sbjct: 1 MKVLNVAEKPSVAKAVATILSRNQGLRVREGRSR-YNKLFEFNYSIRGQHCQMVVTSVIG 59 Query: 2081 HLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWLDGDS 1902 HLMEL+FE+R+RKWHSCDPA LY AP++KFVP+DKLDI+RTLEEEARKCQWLVLWLD D Sbjct: 60 HLMELEFEDRFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCDR 119 Query: 1901 EGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDARQEID 1722 EGENIAFEV+EVC VNRHI +WRA FS++ +R+I+ SVQ+L +PN+L AD+VD RQEID Sbjct: 120 EGENIAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEID 179 Query: 1721 LRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 1542 LRIGASFTRFQTMLL+DAFVLDFA DDR++VLSYGPCQFPTLGFVVERYWEIQSHEPEEF Sbjct: 180 LRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 239 Query: 1541 WKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLKYPPYPL 1419 W +CA IIYEMC++EPTATV V +E LKYPP+PL Sbjct: 240 WTINCSHKSDEGTSTFNWMRAHLFDYTCAVIIYEMCIQEPTATVTKVRQQEKLKYPPHPL 299 Query: 1418 STLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQIGHP 1239 +T+EL+KRASR MSS+HTMKVAE+LY +GFISYPRTETD FS DL GIV+EQ+GHP Sbjct: 300 NTIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSERTDLHGIVQEQLGHP 359 Query: 1238 TWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELVVRHF 1059 WGSYAQ+LLDP LWRNP NGGHDDKAHPPIHPTKFSAGESGWS+DH RLYELVVRHF Sbjct: 360 IWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVRHF 419 Query: 1058 LACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIGQQFL 879 LACVSQPAVGA T V+IDIAGE FS+SG VII +NYLDVY ++SW GS+IPTYV GQQF+ Sbjct: 420 LACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFI 479 Query: 878 PTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRSQFSP 699 PTTL L+SGVTRPP LL+E +L++ M KAGIGTDAT DHIKKLLDR+YATKDS ++FSP Sbjct: 480 PTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSP 539 Query: 698 TNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVFLDAR 519 TNLGEALVMGYDDMGYELWKPYLR+ ME DMK VS GTKR+++ L +CL+++K FLDAR Sbjct: 540 TNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDAR 599 Query: 518 RQKVNLLEAMELFFERSNRPVGDGQN-AGEVVRPCNACHESHMVLKRRLNGDFMAGCLNF 342 KV LLEAM LFFERS+ GD Q+ G+VVR C C ES MVL+R+ +G+FM GCL + Sbjct: 600 LNKVKLLEAMALFFERSS---GDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCLGY 656 Query: 341 PHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGGCDS 162 P CRNVVWLPG+ISEA++TT C+ C PGPV+KIQ KFRRLEIPPNY++DHLGC+ GCD Sbjct: 657 PQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDE 716 Query: 161 ILKDLIEICGTGSRM-ATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 IL+ L EICGTGSR+ +T ARG+ + + +R N RQ C HC QTGHSS Sbjct: 717 ILRQLTEICGTGSRICSTVPAARGRGSNASSTNAQRSNTRQTACIHCSQTGHSS 770 >ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha [Cicer arietinum] Length = 920 Score = 1092 bits (2825), Expect = 0.0 Identities = 537/779 (68%), Positives = 616/779 (79%), Gaps = 20/779 (2%) Frame = -2 Query: 2279 MAGRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMV 2100 MAGR V VLNVAEKPSVAK ++ IL YNRIFEF YT+R QPCHM+ Sbjct: 1 MAGRG-VTVLNVAEKPSVAKSVANILSRNQGLRVRDGRSR-YNRIFEFNYTIRGQPCHML 58 Query: 2099 FTSVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVL 1920 FTSV GHLMEL+FE+RYRKWHSCDPA+LY AP++K VP+DK DI+RTLEEEAR+CQWLVL Sbjct: 59 FTSVIGHLMELEFEDRYRKWHSCDPADLYHAPVRKSVPEDKKDIKRTLEEEARRCQWLVL 118 Query: 1919 WLDGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVD 1740 WLD D EGENIAFEV++VCTA N H+TI RA FS++ +R+I+ +VQ+L +PNK AD+VD Sbjct: 119 WLDCDREGENIAFEVVDVCTAANPHLTIKRARFSALIDREIHQAVQNLVEPNKWFADAVD 178 Query: 1739 ARQEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQS 1560 ARQEIDLRIGASFTRFQTML+KDAF++D DDR+++LSYGPCQFPTLGFVVERYWEIQ+ Sbjct: 179 ARQEIDLRIGASFTRFQTMLMKDAFIIDTITDDRNIILSYGPCQFPTLGFVVERYWEIQA 238 Query: 1559 HEPEEFWKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLK 1437 HEPEEFW +CA IIYEMC EEPTATV NV +E LK Sbjct: 239 HEPEEFWSINCSHRSDEGVANFSWGRGHLFDYTCAVIIYEMCTEEPTATVTNVRQQEKLK 298 Query: 1436 YPPYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVR 1257 YPP+PLST+EL+KRASR RMSS+HTMKVAEELY SGFISYPRTETD+FS DL IV+ Sbjct: 299 YPPHPLSTIELEKRASRYFRMSSEHTMKVAEELYQSGFISYPRTETDNFSSRTDLHAIVQ 358 Query: 1256 EQIGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYE 1077 EQ GHP WG YAQ+LLDPE LWRNP GGHDDKAHPPIHPTKFSAGESGWS+DH +LYE Sbjct: 359 EQQGHPQWGVYAQRLLDPEAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQDHRKLYE 418 Query: 1076 LVVRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYV 897 LVVRHFLACVS+PAVGA TTV+IDIAGE FSA G VI+E+NYLDVY Y+SW GSIIPTY Sbjct: 419 LVVRHFLACVSKPAVGAETTVEIDIAGELFSACGRVILEKNYLDVYQYESWGGSIIPTYT 478 Query: 896 IGQQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDS 717 IGQQF+PTTL L+SGVTRPP L+E +L+S M K GIGTDAT DHIKKLLDR+YATKD+ Sbjct: 479 IGQQFIPTTLTLDSGVTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDA 538 Query: 716 RSQFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQ 537 +F+PTNLGEALVMGYDDMGY+LWKPYLRA ME DMK VS GTK K++ L + LQ++K Sbjct: 539 SMRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDTSLQQMKA 598 Query: 536 VFLDARRQKVNLLEAMELFFERSNRPVGDGQNA-GEVVRPCNACHESHMVLKRRLNGDFM 360 FLDAR KV LLEAM +FFERSNR G+ QNA GEVVR C C ES MVLK+ +G+FM Sbjct: 599 CFLDARLNKVKLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKKSRDGNFM 658 Query: 359 AGCLNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGC 180 GCL FP CRN VWLPG++SEA VTTN CS+C PGPV++IQ KFR+LEIPPNYDV+HLGC Sbjct: 659 VGCLGFPQCRNAVWLPGSVSEAVVTTNTCSNCTPGPVYRIQFKFRQLEIPPNYDVNHLGC 718 Query: 179 IGGCDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 IGGCD IL L EICGTG R M AR + + NPRQ C +C++TGHSS Sbjct: 719 IGGCDEILTQLTEICGTGPR----MPARPRGPTTSTGNAHHTNPRQAVCMNCQETGHSS 773 >ref|XP_012489371.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Gossypium raimondii] gi|763773368|gb|KJB40491.1| hypothetical protein B456_007G066700 [Gossypium raimondii] gi|763773370|gb|KJB40493.1| hypothetical protein B456_007G066700 [Gossypium raimondii] Length = 909 Score = 1091 bits (2822), Expect = 0.0 Identities = 529/773 (68%), Positives = 618/773 (79%), Gaps = 20/773 (2%) Frame = -2 Query: 2261 VRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFTSVTG 2082 ++VLNVAEKPSVAK +S L YNRIFEF Y++R QPCHM+FTSVTG Sbjct: 5 IKVLNVAEKPSVAKSVSGFLSRNQALRVRDGRSR-YNRIFEFNYSIRGQPCHMLFTSVTG 63 Query: 2081 HLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWLDGDS 1902 HLMEL+FE+R+RKWHSCDP +LY AP++KFVP+DKLDI+RTLEEEAR+CQWLVLWLD D Sbjct: 64 HLMELEFEDRFRKWHSCDPLDLYHAPVRKFVPEDKLDIKRTLEEEARRCQWLVLWLDCDR 123 Query: 1901 EGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDARQEID 1722 EGENIAFEVI VC AVNRH+TI RA FS++ +R+I+ ++Q+L PN +D+VDARQEID Sbjct: 124 EGENIAFEVINVCRAVNRHLTIRRARFSALIDREIHHAMQNLIDPNPWFSDAVDARQEID 183 Query: 1721 LRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 1542 LRIGASFTRFQTMLL+D FV+D A DDR++VLSYGPCQFPTLGFVVERYWE+QSHEPEEF Sbjct: 184 LRIGASFTRFQTMLLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEPEEF 243 Query: 1541 WKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLKYPPYPL 1419 W +CA I+YEMCV+EPTATV V HKE LKYPPYPL Sbjct: 244 WTINCSHRSDEGVATFNWMRGHLFDYTCAVIVYEMCVQEPTATVTKVQHKEKLKYPPYPL 303 Query: 1418 STLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQIGHP 1239 +T+EL+KRASR RMSS+HTMKVAEELY +GFISYPRTETD FS DL IV+EQ GHP Sbjct: 304 NTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDCFSSRTDLHAIVQEQQGHP 363 Query: 1238 TWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELVVRHF 1059 WGSYAQ+LLDPE LWRNPG+GGHDDKAHPPIHPTKFS GE GWS+DH LYELVVRHF Sbjct: 364 DWGSYAQRLLDPETGLWRNPGSGGHDDKAHPPIHPTKFSTGEHGWSQDHRTLYELVVRHF 423 Query: 1058 LACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIGQQFL 879 LACVSQPAVGA TTV+IDIAGE FSASG VI+ERNYLDVY Y+SW GS+IPTY +GQQF+ Sbjct: 424 LACVSQPAVGAETTVEIDIAGELFSASGRVILERNYLDVYRYESWGGSMIPTYTVGQQFV 483 Query: 878 PTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRSQFSP 699 P +L L++GVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR+YATKDS ++FSP Sbjct: 484 PASLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSP 543 Query: 698 TNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVFLDAR 519 TNLGEALVMGYDDMGYELWKP LR+ ME DMK+VS G K K + LA+CLQ++K F DAR Sbjct: 544 TNLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKSKDEVLATCLQQMKACFFDAR 603 Query: 518 RQKVNLLEAMELFFERSNRPV-GDGQNAGEVVRPCNACHESHMVLKRRLNGDFMAGCLNF 342 KV LLEAM +FFERSNR V GD AGEVVR C+ C ES MVLK+ +G+FM GC F Sbjct: 604 LNKVKLLEAMAVFFERSNRAVGGDNYAAGEVVRQCDLCQESSMVLKKNRDGNFMVGCSGF 663 Query: 341 PHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGGCDS 162 P CRN +WLPG+I EA+VT+N+CSSC PGPV+ IQ KFR++EIPP ++ +HLGCIGGCD Sbjct: 664 PQCRNAIWLPGSILEAAVTSNICSSCNPGPVYLIQFKFRQIEIPPGFNANHLGCIGGCDD 723 Query: 161 ILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 L+ LIEICGTGSR M+ARG+ T + +R + R ++C HC+QTGHSS Sbjct: 724 TLRQLIEICGTGSR----MSARGRGPTTTSSNGQRSSNRHNSCIHCQQTGHSS 772 >gb|KNA10476.1| hypothetical protein SOVF_143990 [Spinacia oleracea] Length = 941 Score = 1085 bits (2805), Expect = 0.0 Identities = 531/799 (66%), Positives = 620/799 (77%), Gaps = 40/799 (5%) Frame = -2 Query: 2279 MAGRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMV 2100 MAG +R LNVAEKPSVAK +S IL YN+IFEF+YT+R QP HM+ Sbjct: 1 MAGNRQIRALNVAEKPSVAKAVSGILSRNQARVREGRSR--YNKIFEFDYTIRGQPIHML 58 Query: 2099 FTSVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVL 1920 FTSVTGHLMEL+F++RYRKWHSCDP+ELY AP++K VPQDKLDI+RTL++EAR CQWL+L Sbjct: 59 FTSVTGHLMELEFDDRYRKWHSCDPSELYQAPVRKTVPQDKLDIKRTLQQEARSCQWLIL 118 Query: 1919 WLDGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVD 1740 WLD D EGENIA+EVIEVCT NR++ WRA FS++ +RDI+ +VQ+L +PN+ +++VD Sbjct: 119 WLDCDREGENIAYEVIEVCTEANRNMNTWRARFSALIDRDIHEAVQNLDRPNQSFSEAVD 178 Query: 1739 ARQEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQS 1560 ARQEIDLRIGASFTRFQTMLLKDAF DFA +DR+++LSYGPCQFPTLGF+VERYWEIQ+ Sbjct: 179 ARQEIDLRIGASFTRFQTMLLKDAFHFDFATEDRNLILSYGPCQFPTLGFIVERYWEIQA 238 Query: 1559 HEPEEFWKXXXXXS-------------------CAGIIYEMCVEEPTATVKNVCHKESLK 1437 HEPEEFW + CA IYEMCVEEPTATV V +E LK Sbjct: 239 HEPEEFWTINCSHNSEEGTANFSWMRGHMFDYTCAVTIYEMCVEEPTATVTMVRQQEKLK 298 Query: 1436 YPPYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVR 1257 YPPYPLST+EL+KRASR R+SS+HTMKVAEELY SGFISYPRTETDSFS DL+ I + Sbjct: 299 YPPYPLSTIELEKRASRYFRLSSEHTMKVAEELYQSGFISYPRTETDSFSARTDLRAIAQ 358 Query: 1256 EQIGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYE 1077 EQ HP WG YAQ+L+DPE LWRNPGNGGHDDKAHPPIHPTKFSAGESGWS+DH+++YE Sbjct: 359 EQQAHPVWGPYAQRLMDPEADLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYE 418 Query: 1076 LVVRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYV 897 LVVRHFLACVSQPAV A TTV+IDIAGE FSA G VI+ +NYLDVY +D+W GS IPTY+ Sbjct: 419 LVVRHFLACVSQPAVSAETTVEIDIAGELFSACGRVILAKNYLDVYRFDTWGGSFIPTYM 478 Query: 896 IGQQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDS 717 +GQQF PTTL L+SGVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR+YATKD+ Sbjct: 479 LGQQFAPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDA 538 Query: 716 RSQFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQ 537 ++FSPTNLGE+LVMGYDDMGYELWKPYLR+KME+DMK VS GTKRK+D LASCLQE+K Sbjct: 539 NTRFSPTNLGESLVMGYDDMGYELWKPYLRSKMEDDMKAVSLGTKRKADILASCLQEMKA 598 Query: 536 VFLDARRQKVNLLEAMELFFERSNRP-VGDGQNAGEVVRPCNACHESHMVLKRRLNGDFM 360 FLDAR KV L EAM +FF+R+NR + Q G VVR C C ++ MVL+RR +G FM Sbjct: 599 CFLDARLNKVKLFEAMGIFFDRTNRTGAEEQQTIGGVVRRCGLCQQADMVLRRRQDGKFM 658 Query: 359 AGCLNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGC 180 GCL +P CR VVWLPG+ISEA+VT+N C+ C+PGPVF IQ KFRRLEIPPNY VDHLGC Sbjct: 659 VGCLGYPQCRKVVWLPGSISEAAVTSNTCNVCSPGPVFLIQFKFRRLEIPPNYSVDHLGC 718 Query: 179 IGGCDSILKDLIEICGTGSRMATGMTA--RGQRAGET--------------PNRTRRENP 48 IGGCD L+ L EICGTG R G +A RGQ T P T NP Sbjct: 719 IGGCDDTLRQLTEICGTGPRNPPGTSASVRGQAPTTTSGRQAPTTTSGRQAPTTTSGRNP 778 Query: 47 ----RQDTCAHCRQTGHSS 3 ++ C+HCRQTGHSS Sbjct: 779 ASNVQRGVCSHCRQTGHSS 797 >ref|XP_012489370.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Gossypium raimondii] Length = 917 Score = 1084 bits (2803), Expect = 0.0 Identities = 529/781 (67%), Positives = 618/781 (79%), Gaps = 28/781 (3%) Frame = -2 Query: 2261 VRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFTSVTG 2082 ++VLNVAEKPSVAK +S L YNRIFEF Y++R QPCHM+FTSVTG Sbjct: 5 IKVLNVAEKPSVAKSVSGFLSRNQALRVRDGRSR-YNRIFEFNYSIRGQPCHMLFTSVTG 63 Query: 2081 HLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWLDGDS 1902 HLMEL+FE+R+RKWHSCDP +LY AP++KFVP+DKLDI+RTLEEEAR+CQWLVLWLD D Sbjct: 64 HLMELEFEDRFRKWHSCDPLDLYHAPVRKFVPEDKLDIKRTLEEEARRCQWLVLWLDCDR 123 Query: 1901 EGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDARQEID 1722 EGENIAFEVI VC AVNRH+TI RA FS++ +R+I+ ++Q+L PN +D+VDARQEID Sbjct: 124 EGENIAFEVINVCRAVNRHLTIRRARFSALIDREIHHAMQNLIDPNPWFSDAVDARQEID 183 Query: 1721 LRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 1542 LRIGASFTRFQTMLL+D FV+D A DDR++VLSYGPCQFPTLGFVVERYWE+QSHEPEEF Sbjct: 184 LRIGASFTRFQTMLLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEPEEF 243 Query: 1541 WKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLKYPPYPL 1419 W +CA I+YEMCV+EPTATV V HKE LKYPPYPL Sbjct: 244 WTINCSHRSDEGVATFNWMRGHLFDYTCAVIVYEMCVQEPTATVTKVQHKEKLKYPPYPL 303 Query: 1418 STLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQIGHP 1239 +T+EL+KRASR RMSS+HTMKVAEELY +GFISYPRTETD FS DL IV+EQ GHP Sbjct: 304 NTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDCFSSRTDLHAIVQEQQGHP 363 Query: 1238 TWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELVVRHF 1059 WGSYAQ+LLDPE LWRNPG+GGHDDKAHPPIHPTKFS GE GWS+DH LYELVVRHF Sbjct: 364 DWGSYAQRLLDPETGLWRNPGSGGHDDKAHPPIHPTKFSTGEHGWSQDHRTLYELVVRHF 423 Query: 1058 LACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIGQQFL 879 LACVSQPAVGA TTV+IDIAGE FSASG VI+ERNYLDVY Y+SW GS+IPTY +GQQF+ Sbjct: 424 LACVSQPAVGAETTVEIDIAGELFSASGRVILERNYLDVYRYESWGGSMIPTYTVGQQFV 483 Query: 878 PTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRSQFSP 699 P +L L++GVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR+YATKDS ++FSP Sbjct: 484 PASLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSP 543 Query: 698 TNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVFLDAR 519 TNLGEALVMGYDDMGYELWKP LR+ ME DMK+VS G K K + LA+CLQ++K F DAR Sbjct: 544 TNLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKSKDEVLATCLQQMKACFFDAR 603 Query: 518 RQKVNLLEAMELFFERSNRPV-GDGQNAGEVVRPCNACHESHMVLKRRLNGDFMAGCLNF 342 KV LLEAM +FFERSNR V GD AGEVVR C+ C ES MVLK+ +G+FM GC F Sbjct: 604 LNKVKLLEAMAVFFERSNRAVGGDNYAAGEVVRQCDLCQESSMVLKKNRDGNFMVGCSGF 663 Query: 341 PHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLG------- 183 P CRN +WLPG+I EA+VT+N+CSSC PGPV+ IQ KFR++EIPP ++ +HLG Sbjct: 664 PQCRNAIWLPGSILEAAVTSNICSSCNPGPVYLIQFKFRQIEIPPGFNANHLGKDIGPMT 723 Query: 182 -CIGGCDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHS 6 CIGGCD L+ LIEICGTGSR M+ARG+ T + +R + R ++C HC+QTGHS Sbjct: 724 RCIGGCDDTLRQLIEICGTGSR----MSARGRGPTTTSSNGQRSSNRHNSCIHCQQTGHS 779 Query: 5 S 3 S Sbjct: 780 S 780 >ref|XP_010674423.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Beta vulgaris subsp. vulgaris] gi|870862863|gb|KMT14051.1| hypothetical protein BVRB_4g078790 [Beta vulgaris subsp. vulgaris] Length = 918 Score = 1083 bits (2800), Expect = 0.0 Identities = 530/783 (67%), Positives = 617/783 (78%), Gaps = 24/783 (3%) Frame = -2 Query: 2279 MAGRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMV 2100 MAG +R LNVAEKPSVAK +S IL YN+IFEF+YT+R QP HM+ Sbjct: 1 MAGNRPIRALNVAEKPSVAKAVSGILSGNQARVREGRSR--YNKIFEFDYTIRGQPIHML 58 Query: 2099 FTSVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVL 1920 FTSVTGHLMEL+F++RYRKWHSCDP ELY AP++K VPQDK DI+RTL++E R CQWL+L Sbjct: 59 FTSVTGHLMELEFDDRYRKWHSCDPVELYQAPVRKGVPQDKSDIKRTLQQEIRSCQWLIL 118 Query: 1919 WLDGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVD 1740 WLD D EGENIAFEVIEVC VN ++ +WRA FS++ +R+I+ +VQ+L +PN+ AD+VD Sbjct: 119 WLDCDREGENIAFEVIEVCAEVNPNLNMWRARFSALIDREIHEAVQNLDRPNQSFADAVD 178 Query: 1739 ARQEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQS 1560 ARQEIDLRIGASFTRFQTMLLKDAF +FA DDRS+VLSYGPCQFPTLGFVVERYWEIQ+ Sbjct: 179 ARQEIDLRIGASFTRFQTMLLKDAFNFNFATDDRSLVLSYGPCQFPTLGFVVERYWEIQA 238 Query: 1559 HEPEEFWKXXXXXS-------------------CAGIIYEMCVEEPTATVKNVCHKESLK 1437 HEPEEFW + CA IYEMCVEEP ATV V +E LK Sbjct: 239 HEPEEFWTINCSHNSEEGTANFSWMRGHIFDYTCAVSIYEMCVEEPIATVTMVRQQEKLK 298 Query: 1436 YPPYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVR 1257 YPPYPLST+EL+KRASR RMSS+ TMKVAEELY SGFISYPRTETDSFS DL IV+ Sbjct: 299 YPPYPLSTIELEKRASRYFRMSSEQTMKVAEELYQSGFISYPRTETDSFSARTDLHTIVQ 358 Query: 1256 EQIGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYE 1077 EQ HP WGSYAQ+LLDPE LW+NPG+GGHDDKAHPPIHPTKFSAGES WS+DH+++YE Sbjct: 359 EQQAHPVWGSYAQRLLDPEAALWKNPGSGGHDDKAHPPIHPTKFSAGESRWSQDHHKVYE 418 Query: 1076 LVVRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYV 897 LVVRHFLACVSQPAV A TTV+IDIAGE FSASG VI+ +NYLD+Y Y+SW GS+IPTY+ Sbjct: 419 LVVRHFLACVSQPAVSAETTVEIDIAGELFSASGRVILSKNYLDIYRYESWGGSVIPTYM 478 Query: 896 IGQQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDS 717 GQQF PTTL L+SGVTRPP LL+E +L+ M KAGIGTDAT DHIKKLLDR+YA KD+ Sbjct: 479 FGQQFTPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAVKDA 538 Query: 716 RSQFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQ 537 ++FSPTNLGEALVMGYDDMGYELWKPYLR+KME+DMK VS G KRK + LASCLQE+K Sbjct: 539 NTRFSPTNLGEALVMGYDDMGYELWKPYLRSKMEDDMKAVSLGIKRKIEILASCLQEMKA 598 Query: 536 VFLDARRQKVNLLEAMELFFERSNRPVGDGQNA-GEVVRPCNACHESHMVLKRRLNGDFM 360 FLDA++ KV L EAME+FF+R+NRP + Q+A GEVVR C C ++ MVLKR+ +G FM Sbjct: 599 CFLDAKQNKVKLFEAMEIFFDRTNRPGVEEQHAIGEVVRRCGLCRQADMVLKRKPDGKFM 658 Query: 359 AGCLNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGC 180 GCL FP CRNVVWLPG+ISEA VT+N C+SC+PGP+F IQ KFRRLEIPPNY VDHLGC Sbjct: 659 VGCLGFPQCRNVVWLPGSISEAVVTSNTCNSCSPGPIFMIQFKFRRLEIPPNYSVDHLGC 718 Query: 179 IGGCDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENP----RQDTCAHCRQTG 12 +GGCD LK L EICGTG R +G +A + G TP + NP ++ C HCRQ G Sbjct: 719 VGGCDDTLKQLTEICGTGPRNLSGTSASVR--GPTPTTSFGGNPASNVQRGVCFHCRQAG 776 Query: 11 HSS 3 H+S Sbjct: 777 HNS 779 >ref|XP_010674422.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Beta vulgaris subsp. vulgaris] Length = 930 Score = 1083 bits (2800), Expect = 0.0 Identities = 530/783 (67%), Positives = 617/783 (78%), Gaps = 24/783 (3%) Frame = -2 Query: 2279 MAGRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMV 2100 MAG +R LNVAEKPSVAK +S IL YN+IFEF+YT+R QP HM+ Sbjct: 1 MAGNRPIRALNVAEKPSVAKAVSGILSGNQARVREGRSR--YNKIFEFDYTIRGQPIHML 58 Query: 2099 FTSVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVL 1920 FTSVTGHLMEL+F++RYRKWHSCDP ELY AP++K VPQDK DI+RTL++E R CQWL+L Sbjct: 59 FTSVTGHLMELEFDDRYRKWHSCDPVELYQAPVRKGVPQDKSDIKRTLQQEIRSCQWLIL 118 Query: 1919 WLDGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVD 1740 WLD D EGENIAFEVIEVC VN ++ +WRA FS++ +R+I+ +VQ+L +PN+ AD+VD Sbjct: 119 WLDCDREGENIAFEVIEVCAEVNPNLNMWRARFSALIDREIHEAVQNLDRPNQSFADAVD 178 Query: 1739 ARQEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQS 1560 ARQEIDLRIGASFTRFQTMLLKDAF +FA DDRS+VLSYGPCQFPTLGFVVERYWEIQ+ Sbjct: 179 ARQEIDLRIGASFTRFQTMLLKDAFNFNFATDDRSLVLSYGPCQFPTLGFVVERYWEIQA 238 Query: 1559 HEPEEFWKXXXXXS-------------------CAGIIYEMCVEEPTATVKNVCHKESLK 1437 HEPEEFW + CA IYEMCVEEP ATV V +E LK Sbjct: 239 HEPEEFWTINCSHNSEEGTANFSWMRGHIFDYTCAVSIYEMCVEEPIATVTMVRQQEKLK 298 Query: 1436 YPPYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVR 1257 YPPYPLST+EL+KRASR RMSS+ TMKVAEELY SGFISYPRTETDSFS DL IV+ Sbjct: 299 YPPYPLSTIELEKRASRYFRMSSEQTMKVAEELYQSGFISYPRTETDSFSARTDLHTIVQ 358 Query: 1256 EQIGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYE 1077 EQ HP WGSYAQ+LLDPE LW+NPG+GGHDDKAHPPIHPTKFSAGES WS+DH+++YE Sbjct: 359 EQQAHPVWGSYAQRLLDPEAALWKNPGSGGHDDKAHPPIHPTKFSAGESRWSQDHHKVYE 418 Query: 1076 LVVRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYV 897 LVVRHFLACVSQPAV A TTV+IDIAGE FSASG VI+ +NYLD+Y Y+SW GS+IPTY+ Sbjct: 419 LVVRHFLACVSQPAVSAETTVEIDIAGELFSASGRVILSKNYLDIYRYESWGGSVIPTYM 478 Query: 896 IGQQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDS 717 GQQF PTTL L+SGVTRPP LL+E +L+ M KAGIGTDAT DHIKKLLDR+YA KD+ Sbjct: 479 FGQQFTPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAVKDA 538 Query: 716 RSQFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQ 537 ++FSPTNLGEALVMGYDDMGYELWKPYLR+KME+DMK VS G KRK + LASCLQE+K Sbjct: 539 NTRFSPTNLGEALVMGYDDMGYELWKPYLRSKMEDDMKAVSLGIKRKIEILASCLQEMKA 598 Query: 536 VFLDARRQKVNLLEAMELFFERSNRPVGDGQNA-GEVVRPCNACHESHMVLKRRLNGDFM 360 FLDA++ KV L EAME+FF+R+NRP + Q+A GEVVR C C ++ MVLKR+ +G FM Sbjct: 599 CFLDAKQNKVKLFEAMEIFFDRTNRPGVEEQHAIGEVVRRCGLCRQADMVLKRKPDGKFM 658 Query: 359 AGCLNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGC 180 GCL FP CRNVVWLPG+ISEA VT+N C+SC+PGP+F IQ KFRRLEIPPNY VDHLGC Sbjct: 659 VGCLGFPQCRNVVWLPGSISEAVVTSNTCNSCSPGPIFMIQFKFRRLEIPPNYSVDHLGC 718 Query: 179 IGGCDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENP----RQDTCAHCRQTG 12 +GGCD LK L EICGTG R +G +A + G TP + NP ++ C HCRQ G Sbjct: 719 VGGCDDTLKQLTEICGTGPRNLSGTSASVR--GPTPTTSFGGNPASNVQRGVCFHCRQAG 776 Query: 11 HSS 3 H+S Sbjct: 777 HNS 779 >ref|XP_012489369.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Gossypium raimondii] gi|763773367|gb|KJB40490.1| hypothetical protein B456_007G066700 [Gossypium raimondii] gi|763773369|gb|KJB40492.1| hypothetical protein B456_007G066700 [Gossypium raimondii] Length = 928 Score = 1080 bits (2792), Expect = 0.0 Identities = 529/792 (66%), Positives = 618/792 (78%), Gaps = 39/792 (4%) Frame = -2 Query: 2261 VRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFTSVTG 2082 ++VLNVAEKPSVAK +S L YNRIFEF Y++R QPCHM+FTSVTG Sbjct: 5 IKVLNVAEKPSVAKSVSGFLSRNQALRVRDGRSR-YNRIFEFNYSIRGQPCHMLFTSVTG 63 Query: 2081 HLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWLDGDS 1902 HLMEL+FE+R+RKWHSCDP +LY AP++KFVP+DKLDI+RTLEEEAR+CQWLVLWLD D Sbjct: 64 HLMELEFEDRFRKWHSCDPLDLYHAPVRKFVPEDKLDIKRTLEEEARRCQWLVLWLDCDR 123 Query: 1901 EGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDARQEID 1722 EGENIAFEVI VC AVNRH+TI RA FS++ +R+I+ ++Q+L PN +D+VDARQEID Sbjct: 124 EGENIAFEVINVCRAVNRHLTIRRARFSALIDREIHHAMQNLIDPNPWFSDAVDARQEID 183 Query: 1721 LRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 1542 LRIGASFTRFQTMLL+D FV+D A DDR++VLSYGPCQFPTLGFVVERYWE+QSHEPEEF Sbjct: 184 LRIGASFTRFQTMLLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEPEEF 243 Query: 1541 WKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLKYPPYPL 1419 W +CA I+YEMCV+EPTATV V HKE LKYPPYPL Sbjct: 244 WTINCSHRSDEGVATFNWMRGHLFDYTCAVIVYEMCVQEPTATVTKVQHKEKLKYPPYPL 303 Query: 1418 STLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQIGHP 1239 +T+EL+KRASR RMSS+HTMKVAEELY +GFISYPRTETD FS DL IV+EQ GHP Sbjct: 304 NTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDCFSSRTDLHAIVQEQQGHP 363 Query: 1238 TWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELVVRHF 1059 WGSYAQ+LLDPE LWRNPG+GGHDDKAHPPIHPTKFS GE GWS+DH LYELVVRHF Sbjct: 364 DWGSYAQRLLDPETGLWRNPGSGGHDDKAHPPIHPTKFSTGEHGWSQDHRTLYELVVRHF 423 Query: 1058 LACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIGQQFL 879 LACVSQPAVGA TTV+IDIAGE FSASG VI+ERNYLDVY Y+SW GS+IPTY +GQQF+ Sbjct: 424 LACVSQPAVGAETTVEIDIAGELFSASGRVILERNYLDVYRYESWGGSMIPTYTVGQQFV 483 Query: 878 PTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRSQFSP 699 P +L L++GVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR+YATKDS ++FSP Sbjct: 484 PASLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSP 543 Query: 698 TNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVFLDAR 519 TNLGEALVMGYDDMGYELWKP LR+ ME DMK+VS G K K + LA+CLQ++K F DAR Sbjct: 544 TNLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKSKDEVLATCLQQMKACFFDAR 603 Query: 518 RQKVNLLEAMELFFERSNRPV-GDGQNAGEVVRPCNACHESHMVLKRRLNGDFMAGCLNF 342 KV LLEAM +FFERSNR V GD AGEVVR C+ C ES MVLK+ +G+FM GC F Sbjct: 604 LNKVKLLEAMAVFFERSNRAVGGDNYAAGEVVRQCDLCQESSMVLKKNRDGNFMVGCSGF 663 Query: 341 PHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHL-------- 186 P CRN +WLPG+I EA+VT+N+CSSC PGPV+ IQ KFR++EIPP ++ +HL Sbjct: 664 PQCRNAIWLPGSILEAAVTSNICSSCNPGPVYLIQFKFRQIEIPPGFNANHLVLLSHYFP 723 Query: 185 -----------GCIGGCDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQD 39 GCIGGCD L+ LIEICGTGSR M+ARG+ T + +R + R + Sbjct: 724 RCPILMKFSSYGCIGGCDDTLRQLIEICGTGSR----MSARGRGPTTTSSNGQRSSNRHN 779 Query: 38 TCAHCRQTGHSS 3 +C HC+QTGHSS Sbjct: 780 SCIHCQQTGHSS 791 >ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao] gi|508700742|gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao] Length = 845 Score = 1079 bits (2790), Expect = 0.0 Identities = 522/773 (67%), Positives = 615/773 (79%), Gaps = 20/773 (2%) Frame = -2 Query: 2261 VRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFTSVTG 2082 ++VLNVAEKPSVAK +S IL +NRIFEF Y++R QPCHM+FTSVTG Sbjct: 5 IKVLNVAEKPSVAKSVSGILSRNQGLRVRDGRSR-FNRIFEFNYSVRGQPCHMLFTSVTG 63 Query: 2081 HLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWLDGDS 1902 HLMEL+FE+R+RKWHSCDPA+LY AP++K VP+DK+DI+RTLEEEAR+CQWLVLWLD D Sbjct: 64 HLMELEFEDRFRKWHSCDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLWLDCDR 123 Query: 1901 EGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDARQEID 1722 EGENIAFEVI+VC AVN H+TI RA FS++ ER+I+ + Q+L PN +D+VDARQEID Sbjct: 124 EGENIAFEVIDVCRAVNCHLTIRRARFSALIEREIHHATQNLVDPNPWFSDAVDARQEID 183 Query: 1721 LRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 1542 LRIGASFTRFQTM+L+D FV+D A DDR++VLSYGPCQFPTLGFVVERYWE+QSHEPEEF Sbjct: 184 LRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEPEEF 243 Query: 1541 WKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLKYPPYPL 1419 W +CA I+YEMCV+EP ATV V H+E LKYPPYPL Sbjct: 244 WTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCVQEPNATVTKVRHQEKLKYPPYPL 303 Query: 1418 STLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQIGHP 1239 ST+EL+KRASR RMSS+HTMKVAE+LY +GFISYPRTETD FS DL IV+EQ HP Sbjct: 304 STIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTDLHAIVQEQQDHP 363 Query: 1238 TWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELVVRHF 1059 WGSYAQ+LLDP LWRNP +GGHDDKAHPPIHPTKFSAGE WS+DH +LYELVVRHF Sbjct: 364 EWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRKLYELVVRHF 423 Query: 1058 LACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIGQQFL 879 LACVSQPAVGA TTV+IDIA EQFS SG VI+ERNYLDVY Y+SW GS+IPTY +GQQF+ Sbjct: 424 LACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTLGQQFI 483 Query: 878 PTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRSQFSP 699 PT+L L++GVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR+YATKDS ++FSP Sbjct: 484 PTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSP 543 Query: 698 TNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVFLDAR 519 T LGEALVMGYDDMGYELWKP LR+ ME DMK+VS G KRK + LA+CLQ++K FLDAR Sbjct: 544 TKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKACFLDAR 603 Query: 518 RQKVNLLEAMELFFERSNRPVGDGQN-AGEVVRPCNACHESHMVLKRRLNGDFMAGCLNF 342 KV LLEAM +FFERSN+ GD + AGEVVR C C ES MVLK+ +G+FM GCL F Sbjct: 604 LNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMVGCLGF 663 Query: 341 PHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGGCDS 162 P CRN +WLPG++ EA+VT+N+C SC PGPV+ IQ KFR+LEIPP ++ +HLGCIGGCD Sbjct: 664 PQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCIGGCDD 723 Query: 161 ILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 IL+ LIEICGTGSR M+ARG+ T + +R + RQ C +C+QTGHSS Sbjct: 724 ILRQLIEICGTGSR----MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSS 772 >ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao] gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao] Length = 914 Score = 1079 bits (2790), Expect = 0.0 Identities = 522/773 (67%), Positives = 615/773 (79%), Gaps = 20/773 (2%) Frame = -2 Query: 2261 VRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFTSVTG 2082 ++VLNVAEKPSVAK +S IL +NRIFEF Y++R QPCHM+FTSVTG Sbjct: 5 IKVLNVAEKPSVAKSVSGILSRNQGLRVRDGRSR-FNRIFEFNYSVRGQPCHMLFTSVTG 63 Query: 2081 HLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWLDGDS 1902 HLMEL+FE+R+RKWHSCDPA+LY AP++K VP+DK+DI+RTLEEEAR+CQWLVLWLD D Sbjct: 64 HLMELEFEDRFRKWHSCDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLWLDCDR 123 Query: 1901 EGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDARQEID 1722 EGENIAFEVI+VC AVN H+TI RA FS++ ER+I+ + Q+L PN +D+VDARQEID Sbjct: 124 EGENIAFEVIDVCRAVNCHLTIRRARFSALIEREIHHATQNLVDPNPWFSDAVDARQEID 183 Query: 1721 LRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 1542 LRIGASFTRFQTM+L+D FV+D A DDR++VLSYGPCQFPTLGFVVERYWE+QSHEPEEF Sbjct: 184 LRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEPEEF 243 Query: 1541 WKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLKYPPYPL 1419 W +CA I+YEMCV+EP ATV V H+E LKYPPYPL Sbjct: 244 WTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCVQEPNATVTKVRHQEKLKYPPYPL 303 Query: 1418 STLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQIGHP 1239 ST+EL+KRASR RMSS+HTMKVAE+LY +GFISYPRTETD FS DL IV+EQ HP Sbjct: 304 STIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTDLHAIVQEQQDHP 363 Query: 1238 TWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELVVRHF 1059 WGSYAQ+LLDP LWRNP +GGHDDKAHPPIHPTKFSAGE WS+DH +LYELVVRHF Sbjct: 364 EWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRKLYELVVRHF 423 Query: 1058 LACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIGQQFL 879 LACVSQPAVGA TTV+IDIA EQFS SG VI+ERNYLDVY Y+SW GS+IPTY +GQQF+ Sbjct: 424 LACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTLGQQFI 483 Query: 878 PTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRSQFSP 699 PT+L L++GVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR+YATKDS ++FSP Sbjct: 484 PTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSP 543 Query: 698 TNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVFLDAR 519 T LGEALVMGYDDMGYELWKP LR+ ME DMK+VS G KRK + LA+CLQ++K FLDAR Sbjct: 544 TKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKACFLDAR 603 Query: 518 RQKVNLLEAMELFFERSNRPVGDGQN-AGEVVRPCNACHESHMVLKRRLNGDFMAGCLNF 342 KV LLEAM +FFERSN+ GD + AGEVVR C C ES MVLK+ +G+FM GCL F Sbjct: 604 LNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMVGCLGF 663 Query: 341 PHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGGCDS 162 P CRN +WLPG++ EA+VT+N+C SC PGPV+ IQ KFR+LEIPP ++ +HLGCIGGCD Sbjct: 664 PQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCIGGCDD 723 Query: 161 ILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTGHSS 3 IL+ LIEICGTGSR M+ARG+ T + +R + RQ C +C+QTGHSS Sbjct: 724 ILRQLIEICGTGSR----MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSS 772 >ref|XP_012489368.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Gossypium raimondii] Length = 936 Score = 1077 bits (2784), Expect = 0.0 Identities = 529/800 (66%), Positives = 618/800 (77%), Gaps = 47/800 (5%) Frame = -2 Query: 2261 VRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFTSVTG 2082 ++VLNVAEKPSVAK +S L YNRIFEF Y++R QPCHM+FTSVTG Sbjct: 5 IKVLNVAEKPSVAKSVSGFLSRNQALRVRDGRSR-YNRIFEFNYSIRGQPCHMLFTSVTG 63 Query: 2081 HLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWLDGDS 1902 HLMEL+FE+R+RKWHSCDP +LY AP++KFVP+DKLDI+RTLEEEAR+CQWLVLWLD D Sbjct: 64 HLMELEFEDRFRKWHSCDPLDLYHAPVRKFVPEDKLDIKRTLEEEARRCQWLVLWLDCDR 123 Query: 1901 EGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDARQEID 1722 EGENIAFEVI VC AVNRH+TI RA FS++ +R+I+ ++Q+L PN +D+VDARQEID Sbjct: 124 EGENIAFEVINVCRAVNRHLTIRRARFSALIDREIHHAMQNLIDPNPWFSDAVDARQEID 183 Query: 1721 LRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHEPEEF 1542 LRIGASFTRFQTMLL+D FV+D A DDR++VLSYGPCQFPTLGFVVERYWE+QSHEPEEF Sbjct: 184 LRIGASFTRFQTMLLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEPEEF 243 Query: 1541 WKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLKYPPYPL 1419 W +CA I+YEMCV+EPTATV V HKE LKYPPYPL Sbjct: 244 WTINCSHRSDEGVATFNWMRGHLFDYTCAVIVYEMCVQEPTATVTKVQHKEKLKYPPYPL 303 Query: 1418 STLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQIGHP 1239 +T+EL+KRASR RMSS+HTMKVAEELY +GFISYPRTETD FS DL IV+EQ GHP Sbjct: 304 NTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDCFSSRTDLHAIVQEQQGHP 363 Query: 1238 TWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELVVRHF 1059 WGSYAQ+LLDPE LWRNPG+GGHDDKAHPPIHPTKFS GE GWS+DH LYELVVRHF Sbjct: 364 DWGSYAQRLLDPETGLWRNPGSGGHDDKAHPPIHPTKFSTGEHGWSQDHRTLYELVVRHF 423 Query: 1058 LACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIGQQFL 879 LACVSQPAVGA TTV+IDIAGE FSASG VI+ERNYLDVY Y+SW GS+IPTY +GQQF+ Sbjct: 424 LACVSQPAVGAETTVEIDIAGELFSASGRVILERNYLDVYRYESWGGSMIPTYTVGQQFV 483 Query: 878 PTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRSQFSP 699 P +L L++GVTRPP LL+E +L+S M KAGIGTDAT DHIKKLLDR+YATKDS ++FSP Sbjct: 484 PASLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSP 543 Query: 698 TNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVFLDAR 519 TNLGEALVMGYDDMGYELWKP LR+ ME DMK+VS G K K + LA+CLQ++K F DAR Sbjct: 544 TNLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKSKDEVLATCLQQMKACFFDAR 603 Query: 518 RQKVNLLEAMELFFERSNRPV-GDGQNAGEVVRPCNACHESHMVLKRRLNGDFMAGCLNF 342 KV LLEAM +FFERSNR V GD AGEVVR C+ C ES MVLK+ +G+FM GC F Sbjct: 604 LNKVKLLEAMAVFFERSNRAVGGDNYAAGEVVRQCDLCQESSMVLKKNRDGNFMVGCSGF 663 Query: 341 PHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHL-------- 186 P CRN +WLPG+I EA+VT+N+CSSC PGPV+ IQ KFR++EIPP ++ +HL Sbjct: 664 PQCRNAIWLPGSILEAAVTSNICSSCNPGPVYLIQFKFRQIEIPPGFNANHLGKDIGPMT 723 Query: 185 -------------------GCIGGCDSILKDLIEICGTGSRMATGMTARGQRAGETPNRT 63 GCIGGCD L+ LIEICGTGSR M+ARG+ T + Sbjct: 724 LLLSHYFPRCPILMKFSSYGCIGGCDDTLRQLIEICGTGSR----MSARGRGPTTTSSNG 779 Query: 62 RRENPRQDTCAHCRQTGHSS 3 +R + R ++C HC+QTGHSS Sbjct: 780 QRSSNRHNSCIHCQQTGHSS 799 >gb|KQK23486.1| hypothetical protein BRADI_1g74120 [Brachypodium distachyon] Length = 1060 Score = 1075 bits (2781), Expect = 0.0 Identities = 520/773 (67%), Positives = 609/773 (78%), Gaps = 19/773 (2%) Frame = -2 Query: 2273 GRSYVRVLNVAEKPSVAKGISTILXXXXXXXXXXXXXXPYNRIFEFEYTLRSQPCHMVFT 2094 G +RVLNVAEKPSVAK ++ IL YNRIFEF Y + Q CHM+ T Sbjct: 98 GGGAIRVLNVAEKPSVAKSVAEILSRRAMQSRPGRSR--YNRIFEFNYAIGGQACHMLVT 155 Query: 2093 SVTGHLMELDFEERYRKWHSCDPAELYAAPLKKFVPQDKLDIRRTLEEEARKCQWLVLWL 1914 SVTGHLMELDF++RYR+W+SCDP EL+ AP++K VPQDKLDI+RTLEEEAR CQWLVLWL Sbjct: 156 SVTGHLMELDFDDRYRRWYSCDPVELFHAPVRKAVPQDKLDIKRTLEEEARTCQWLVLWL 215 Query: 1913 DGDSEGENIAFEVIEVCTAVNRHITIWRALFSSVTERDIYTSVQDLRQPNKLLADSVDAR 1734 D D EGENIA+EV+E+C VN + IWRA FS++ +R+I+ +VQ L +PNKL AD+VDAR Sbjct: 216 DCDREGENIAYEVVEICAGVNHCLNIWRARFSALIDREIHEAVQHLGRPNKLFADAVDAR 275 Query: 1733 QEIDLRIGASFTRFQTMLLKDAFVLDFAGDDRSVVLSYGPCQFPTLGFVVERYWEIQSHE 1554 QEIDLRIGASFTRFQTMLLKDAFVLD +G++R++VLSYGPCQFPTLGF+VER+WEIQ+HE Sbjct: 276 QEIDLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAHE 335 Query: 1553 PEEFWKXXXXX-------------------SCAGIIYEMCVEEPTATVKNVCHKESLKYP 1431 PEEFW S A +IYEMCV+EP ATV+NV ++E LKYP Sbjct: 336 PEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAIVIYEMCVQEPMATVQNVRNQEKLKYP 395 Query: 1430 PYPLSTLELQKRASRCLRMSSDHTMKVAEELYMSGFISYPRTETDSFSGNNDLKGIVREQ 1251 PYPLSTLELQKRASRC RMSS+HTMKVAEELY +GFISYPRTETD+FS N DL I EQ Sbjct: 396 PYPLSTLELQKRASRCCRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHAIAHEQ 455 Query: 1250 IGHPTWGSYAQQLLDPERRLWRNPGNGGHDDKAHPPIHPTKFSAGESGWSRDHNRLYELV 1071 + HP WGSYAQ+LL+PE RLWRNP NGGHDDKAHPPIHPTKF+AGES WS+DH+++YELV Sbjct: 456 VPHPVWGSYAQRLLNPEERLWRNPSNGGHDDKAHPPIHPTKFTAGESNWSQDHHKVYELV 515 Query: 1070 VRHFLACVSQPAVGAGTTVDIDIAGEQFSASGCVIIERNYLDVYPYDSWDGSIIPTYVIG 891 VRHFLAC SQPAVGA TTV+IDIAGEQF+ASG V++ +NYLDVY YDSW GS++PTY IG Sbjct: 516 VRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRYDSWGGSLLPTYTIG 575 Query: 890 QQFLPTTLKLESGVTRPPSLLTEVELISSMAKAGIGTDATTADHIKKLLDRYYATKDSRS 711 QQF+PTTL L+SGVTRPP LL E +L+S M KAGIGTDAT +HIKKLLDR YATKD+ S Sbjct: 576 QQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHEHIKKLLDRCYATKDANS 635 Query: 710 QFSPTNLGEALVMGYDDMGYELWKPYLRAKMEEDMKKVSTGTKRKSDFLASCLQEVKQVF 531 +FSPTNLGEALVMGYD+MGYELWKPYLRA ME DMK VS GTK K + L CLQ++K F Sbjct: 636 RFSPTNLGEALVMGYDEMGYELWKPYLRAMMEADMKAVSIGTKSKLEVLEGCLQQMKACF 695 Query: 530 LDARRQKVNLLEAMELFFERSNRPVGDGQNAGEVVRPCNACHESHMVLKRRLNGDFMAGC 351 LDAR KV LL+AM FF RSNRP+ + QN EVVRPC AC++S M+LKR+ NG FM GC Sbjct: 696 LDARSNKVKLLDAMGTFFARSNRPLNETQNPMEVVRPCGACNDSEMLLKRKPNGGFMVGC 755 Query: 350 LNFPHCRNVVWLPGAISEASVTTNVCSSCAPGPVFKIQLKFRRLEIPPNYDVDHLGCIGG 171 +FP CRNVVWLPG++SEA+VT +C +C PGPV+KIQ KF R +IPPN+DVDHLGCIGG Sbjct: 756 RSFPQCRNVVWLPGSLSEAAVTEQICPTCVPGPVYKIQFKFNRRDIPPNFDVDHLGCIGG 815 Query: 170 CDSILKDLIEICGTGSRMATGMTARGQRAGETPNRTRRENPRQDTCAHCRQTG 12 CD +LK+LIEI + T ARGQ +T + R+ PRQD R TG Sbjct: 816 CDDVLKELIEITRFVNHNQTTTPARGQNQTQTTSGARQGAPRQDLHTGFRSTG 868