BLASTX nr result
ID: Ophiopogon21_contig00011481
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00011481
(351 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT01370.1| putative non-LTR retroelement reverse transcripta... 68 1e-13
ref|XP_006649030.1| PREDICTED: uncharacterized protein LOC102700... 70 2e-13
gb|EMT28407.1| Beta-fructofuranosidase, insoluble isoenzyme 7 [A... 64 2e-13
emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group] gi... 65 4e-13
gb|AAU90246.1| hypothetical protein [Oryza sativa Japonica Group] 66 9e-13
emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera] 72 9e-13
gb|AAM01128.1|AC108884_10 putative non-LTR retroelement reverse ... 65 3e-12
ref|XP_004980308.2| PREDICTED: uncharacterized protein LOC101767... 54 3e-12
gb|AAT93994.1| hypothetical protein [Oryza sativa Japonica Group] 72 3e-12
gb|KRH15654.1| hypothetical protein GLYMA_14G1028001, partial [G... 70 3e-12
gb|ABG66243.1| retrotransposon protein, putative, unclassified [... 66 1e-11
gb|AAP53939.1| retrotransposon protein, putative, unclassified [... 63 2e-11
gb|ABA91475.1| retrotransposon protein, putative, unclassified [... 65 2e-11
ref|XP_002461982.1| hypothetical protein SORBIDRAFT_02g011546, p... 67 2e-11
ref|XP_008351012.1| PREDICTED: putative ribonuclease H protein A... 63 2e-11
dbj|BAH79979.1| putative unclassified retrotransposon protein [O... 69 2e-11
gb|ABA99487.1| retrotransposon protein, putative, unclassified [... 58 3e-11
gb|AAX96121.1| retrotransposon protein, putative, unclassified [... 64 3e-11
emb|CAE05820.1| OSJNBa0028M15.12 [Oryza sativa Japonica Group] 69 3e-11
gb|AAX92720.1| retrotransposon protein, putative, unclassified [... 62 3e-11
>gb|AAT01370.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1614
Score = 68.2 bits (165), Expect(2) = 1e-13
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKVSWDF++ ++ +GF ++W++WI ING F+ RGLRQGD
Sbjct: 1205 EKAYDKVSWDFLIEVMVRKGFPSKWVNWIKTCVMGGRVCININGERTDFFRTFRGLRQGD 1264
Query: 169 LLLPYLF 149
L P LF
Sbjct: 1265 PLSPLLF 1271
Score = 34.7 bits (78), Expect(2) = 1e-13
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGL--GSFENGIVSLQYVDDTIL 30
LF L +D M++ K ++ GL F GI LQY DDT+L
Sbjct: 1270 LFNLISDALAAMLDSAKREGVLSGLVPDIFPGGITHLQYADDTVL 1314
>ref|XP_006649030.1| PREDICTED: uncharacterized protein LOC102700126 [Oryza brachyantha]
Length = 1080
Score = 70.5 bits (171), Expect(2) = 2e-13
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKVSW+F+ +LK +GFS+ WI WI ING + F RGLRQG+
Sbjct: 857 EKAYDKVSWEFLFEVLKRKGFSDNWIGWIKSCVTGGKVCVNINGNRSQFFGTSRGLRQGE 916
Query: 169 LLLPYLF 149
L P LF
Sbjct: 917 PLSPLLF 923
Score = 31.2 bits (69), Expect(2) = 2e-13
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGL--GSFENGIVSLQYVDDTIL 30
LF L D M E K+ ++ GL G+ LQY DDTI+
Sbjct: 922 LFNLVGDALARMFELAKSNGILSGLVPNLVNGGLTHLQYTDDTII 966
>gb|EMT28407.1| Beta-fructofuranosidase, insoluble isoenzyme 7 [Aegilops tauschii]
Length = 849
Score = 63.5 bits (153), Expect(2) = 2e-13
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV+WDF++ +L++RGF ++WI W+ IN G F +GL QGD
Sbjct: 625 EKAYDKVNWDFLVEMLRSRGFGDKWIGWVCSCLHQGTFSVRINDTNGPHFVGGKGLIQGD 684
Query: 169 LLLPYLF 149
P LF
Sbjct: 685 PSSPLLF 691
Score = 38.1 bits (87), Expect(2) = 2e-13
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGL--GSFENGIVSLQYVDDTILISDTN 15
LF L DVF+ M++ + DLIKGL +G+ LQY DDT+L + +
Sbjct: 690 LFNLVADVFSKMLKKAASQDLIKGLLPHVILDGVAILQYADDTLLFLEAS 739
>emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group]
gi|38346911|emb|CAE03883.2| OSJNBb0015N08.11 [Oryza
sativa Japonica Group]
Length = 1026
Score = 65.5 bits (158), Expect(2) = 4e-13
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV+W FI +LKA+GF ++W WI +N G FK +GLRQGD
Sbjct: 386 EKAYDKVNWVFIYRMLKAKGFPDQWCDWIMKVVMGGKVAVKVNDQIGSFFKTHKGLRQGD 445
Query: 169 LLLPYLF 149
L P LF
Sbjct: 446 PLSPLLF 452
Score = 35.4 bits (80), Expect(2) = 4e-13
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGLGSF-ENGIVSLQYVDDTI-LISD 21
LF LA + T +++ + LI+GLG+ +N I LQY DDTI LI+D
Sbjct: 451 LFNLAAEALTLLVQRAEENSLIEGLGTNGDNKIAILQYADDTIFLIND 498
>gb|AAU90246.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1275
Score = 65.9 bits (159), Expect(2) = 9e-13
Identities = 30/67 (44%), Positives = 37/67 (55%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EK YD+VSWDF+ L +GF +WI+W+ ING F+ RGLRQGD
Sbjct: 931 EKTYDRVSWDFLFEFLSRKGFPKKWINWVKACVMRGRVCVNINGERSDFFRTYRGLRQGD 990
Query: 169 LLLPYLF 149
L P LF
Sbjct: 991 PLSPLLF 997
Score = 33.9 bits (76), Expect(2) = 9e-13
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGL--GSFENGIVSLQYVDDTILI--SDTN 15
LF L +D + + K ++ GL F NGI LQY DDT++ DTN
Sbjct: 996 LFNLVSDALAAIFDNAKRAGILTGLVLEIFPNGITHLQYADDTVIFIPFDTN 1047
>emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]
Length = 971
Score = 72.0 bits (175), Expect(2) = 9e-13
Identities = 35/67 (52%), Positives = 40/67 (59%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV W+FIL I+K GF +WI WI +ING F+ RGLRQGD
Sbjct: 338 EKAYDKVDWNFILTIMKKMGFGEKWIRWIQWCISTASFSVMINGTPTGFFQSSRGLRQGD 397
Query: 169 LLLPYLF 149
L PYLF
Sbjct: 398 PLSPYLF 404
Score = 27.7 bits (60), Expect(2) = 9e-13
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGL---GSFENGIV--SLQYVDDTIL 30
LFV+A +VFT I+ D + G G E G++ L + DDT++
Sbjct: 403 LFVIAKEVFTVFIKRAVEGDFLSGCRVKGRSEEGVIISHLLFADDTLV 450
>gb|AAM01128.1|AC108884_10 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1228
Score = 65.5 bits (158), Expect(2) = 3e-12
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV+W+F++ +++ + F +WISWI ING F+ RGLRQGD
Sbjct: 1103 EKAYDKVNWEFLIEVMERKNFPKKWISWIKSCVMGGRVCININGERTDFFRTFRGLRQGD 1162
Query: 169 LLLPYLF 149
L P LF
Sbjct: 1163 PLSPLLF 1169
Score = 32.7 bits (73), Expect(2) = 3e-12
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGL--GSFENGIVSLQYVDDTIL 30
LF L +D M + K ++ GL F GI LQY DDT+L
Sbjct: 1168 LFNLVSDALAAMFDSAKAAGVLCGLVPNIFPGGITHLQYADDTVL 1212
>ref|XP_004980308.2| PREDICTED: uncharacterized protein LOC101767160 [Setaria italica]
Length = 676
Score = 54.3 bits (129), Expect(2) = 3e-12
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV W+F+ +L + F I W+ +NG G F+ +G+RQGD
Sbjct: 495 EKAYDKVDWNFLKEVLIKKNFPKERIEWMMKAVTGDRVAINLNGERGDYFRSYKGVRQGD 554
Query: 169 LLLPYLF 149
L P LF
Sbjct: 555 PLSPLLF 561
Score = 43.9 bits (102), Expect(2) = 3e-12
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGLGS--FENGIVSLQYVDDTILI---SDTNFYML 3
LF L +DVF+G++ K LI+GL S E G+ LQY DDTIL S+ N ML
Sbjct: 560 LFNLVSDVFSGILNHAKERGLIEGLVSDLVEGGLTHLQYADDTILFLKNSENNIIML 616
>gb|AAT93994.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 399
Score = 72.0 bits (175), Expect(2) = 3e-12
Identities = 35/67 (52%), Positives = 41/67 (61%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV W F+L L+ +GFS RWISWI +N GR F+ K+GLRQGD
Sbjct: 194 EKAYDKVKWPFLLQTLRMKGFSPRWISWIESFISGGSVAIKVNDDIGRFFQTKKGLRQGD 253
Query: 169 LLLPYLF 149
L P LF
Sbjct: 254 PLSPILF 260
Score = 26.2 bits (56), Expect(2) = 3e-12
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGLGS--FENGIVSLQYVDDTILISD 21
LF + D+ MI+ N + GL + G+ LQY DD IL +
Sbjct: 259 LFNIIADMLAVMIQRANNAGQLVGLVHHLIDGGLSILQYADDIILFME 306
>gb|KRH15654.1| hypothetical protein GLYMA_14G1028001, partial [Glycine max]
Length = 607
Score = 70.5 bits (171), Expect(2) = 3e-12
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYD VSWDF+L +++ GF N+WISW+ L+NG +F +RGLRQGD
Sbjct: 157 EKAYDLVSWDFLLYLMRGMGFCNKWISWVDGCLKSAFISILVNGSPLAEFIPQRGLRQGD 216
Query: 169 LLLPYLF 149
L P+LF
Sbjct: 217 PLAPFLF 223
Score = 27.3 bits (59), Expect(2) = 3e-12
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKG--LGSFENGIVSLQYVDDTILISDTN 15
LF + TG++ + +L +G +G+ I +LQY DDT+ T+
Sbjct: 222 LFNIVAKGLTGLMREAQEKNLFEGFKVGTNNVDISTLQYADDTVFFGSTS 271
>gb|ABG66243.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 335
Score = 65.9 bits (159), Expect(2) = 1e-11
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV WDF+ ++L+ + F ++WI W+ ING G F+ +G+RQGD
Sbjct: 170 EKAYDKVHWDFLFDVLQRKCFCDKWIGWMKSVTENGKVAVNINGENGEFFRTYKGVRQGD 229
Query: 169 LLLPYLF 149
L P LF
Sbjct: 230 TLSPLLF 236
Score = 30.0 bits (66), Expect(2) = 1e-11
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGLGSF--ENGIVSLQYVDDTILISDTN 15
LF L D + M+ K ++GL G+ LQY DDTIL T+
Sbjct: 235 LFNLVADALSEMLNRAKETGHLQGLVPHLVTGGLTHLQYADDTILFMSTS 284
>gb|AAP53939.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1652
Score = 62.8 bits (151), Expect(2) = 2e-11
Identities = 29/67 (43%), Positives = 38/67 (56%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV W F+ L+ +GFS++W WI +N G F+ ++GLRQGD
Sbjct: 1294 EKAYDKVDWKFLQQSLRMKGFSSKWCDWIDSIVRGGSVAVKVNDEIGSYFQTRKGLRQGD 1353
Query: 169 LLLPYLF 149
L P LF
Sbjct: 1354 PLSPILF 1360
Score = 32.7 bits (73), Expect(2) = 2e-11
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGLGSF--ENGIVSLQYVDDTILISD 21
LF L D+ +I+ K+ KG+ +NG+ LQY DDTIL D
Sbjct: 1359 LFNLVVDMLAILIQRAKDQGRFKGVVPHLVDNGLSILQYADDTILFMD 1406
>gb|ABA91475.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 994
Score = 65.5 bits (158), Expect(2) = 2e-11
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV W F+ L+ +GFS++W SW+ +N G F+ K+GLRQGD
Sbjct: 527 EKAYDKVRWSFLQQTLRMKGFSHKWCSWVEKFTQGGNVSIKVNDQVGNYFQSKKGLRQGD 586
Query: 169 LLLPYLF 149
+ P LF
Sbjct: 587 PMSPVLF 593
Score = 30.0 bits (66), Expect(2) = 2e-11
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGL--GSFENGIVSLQYVDDTIL 30
LF + D+ +I KN D ++G+ ++G+ LQY DDT++
Sbjct: 592 LFNIVVDMLAILIARAKNADRVEGVIPHLIQDGLSILQYADDTVI 636
>ref|XP_002461982.1| hypothetical protein SORBIDRAFT_02g011546, partial [Sorghum
bicolor] gi|241925359|gb|EER98503.1| hypothetical
protein SORBIDRAFT_02g011546, partial [Sorghum bicolor]
Length = 761
Score = 67.4 bits (163), Expect(2) = 2e-11
Identities = 31/67 (46%), Positives = 39/67 (58%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYD+V WDF+ ++ RGF ++WISW+ ING F+ RGLRQGD
Sbjct: 554 EKAYDRVCWDFLEETMRGRGFPHKWISWVMQTVREGQVCIDINGERSAYFRTFRGLRQGD 613
Query: 169 LLLPYLF 149
L P LF
Sbjct: 614 PLSPLLF 620
Score = 28.1 bits (61), Expect(2) = 2e-11
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGL--GSFENGIVSLQYVDDTILISDT 18
LF L D M++ I G+ GI +QY DDT+++ DT
Sbjct: 619 LFNLVADALGVMLDSAVRQGHISGVLNNLIPGGISHIQYADDTVIMVDT 667
>ref|XP_008351012.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 685
Score = 63.2 bits (152), Expect(2) = 2e-11
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYD V W F+ +L +GF RW W+ LING KFK RGLRQGD
Sbjct: 47 EKAYDHVDWSFLEXVLLRKGFGFRWRXWMLGCLGTANFSVLINGRPRGKFKASRGLRQGD 106
Query: 169 LLLPYLF 149
L P+LF
Sbjct: 107 PLSPFLF 113
Score = 32.3 bits (72), Expect(2) = 2e-11
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGL--GSFENGIVSLQYVDDTI 33
LF L DV + MIE + LIKGL G I LQ+ DDTI
Sbjct: 112 LFTLVVDVLSRMIEKAQGNHLIKGLRVGVDNVEISHLQFADDTI 155
>dbj|BAH79979.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 1283
Score = 68.9 bits (167), Expect(2) = 2e-11
Identities = 32/67 (47%), Positives = 40/67 (59%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV W F++ L+ +GFS +WISWI +N G F+ K+GLRQGD
Sbjct: 944 EKAYDKVKWPFLMQALRMKGFSTKWISWIESFVSGGSVSIKVNNDVGPFFQTKKGLRQGD 1003
Query: 169 LLLPYLF 149
L P LF
Sbjct: 1004 PLSPMLF 1010
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGLGSF--ENGIVSLQYVDDTILISD 21
LF + D+ +I K I G+ ++GI LQY DDTIL D
Sbjct: 1009 LFNIVADMLVILINRAKVDGQICGVVPHLVDDGISILQYADDTILFMD 1056
>gb|ABA99487.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1627
Score = 58.2 bits (139), Expect(2) = 3e-11
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYD + W F+ ++KA+GF + W WI +N G F GLRQGD
Sbjct: 1013 EKAYDNIKWSFVYKMMKAKGFPDIWCDWILKVVKGGKVAIRVNDQIGLYFTTHNGLRQGD 1072
Query: 169 LLLPYLF 149
L P LF
Sbjct: 1073 PLSPLLF 1079
Score = 36.6 bits (83), Expect(2) = 3e-11
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGLGS--FENGIVSLQYVDDTI-LISDTNFY 9
LF +A D T +I+ + LIKGLG G+ LQY DDTI LI D+ Y
Sbjct: 1078 LFNIAADALTILIKRAEQQGLIKGLGMDVMREGVAILQYDDDTICLIQDSLEY 1130
>gb|AAX96121.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77550160|gb|ABA92957.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1556
Score = 63.5 bits (153), Expect(2) = 3e-11
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV+W+F+ L+ +GFS+ W WI +N G F+ K+GLRQGD
Sbjct: 1312 EKAYDKVNWNFLQQALRMKGFSDIWCKWIDQVVSGGSVAVKVNDEIGHFFQTKKGLRQGD 1371
Query: 169 LLLPYLF 149
L P LF
Sbjct: 1372 PLSPILF 1378
Score = 31.2 bits (69), Expect(2) = 3e-11
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGL--GSFENGIVSLQYVDDTILISD 21
LF L D+ +I ++ + + G+ +NG+ LQY DDTIL D
Sbjct: 1377 LFNLVADMLAILINRARDLETLNGVIPQLVDNGLSILQYADDTILFMD 1424
>emb|CAE05820.1| OSJNBa0028M15.12 [Oryza sativa Japonica Group]
Length = 1200
Score = 68.6 bits (166), Expect(2) = 3e-11
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV W F+L L+ +GFS +WISWI +N GR F+ K+ LRQGD
Sbjct: 1086 EKAYDKVKWPFLLQTLRMKGFSPKWISWIESIISGGSVAIKVNDDVGRFFQTKKDLRQGD 1145
Query: 169 LLLPYLF 149
L P LF
Sbjct: 1146 PLSPILF 1152
Score = 26.2 bits (56), Expect(2) = 3e-11
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGLGS--FENGIVSLQYVDDTILISD 21
LF L D+ MI+ + I G+ + G+ LQY DDTIL +
Sbjct: 1151 LFNLIADMLAIMIQRAQLAGQIDGIVPHLIDGGLSILQYADDTILFGN 1198
>gb|AAX92720.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|62701880|gb|AAX92953.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group] gi|77548739|gb|ABA91536.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 838
Score = 62.0 bits (149), Expect(2) = 3e-11
Identities = 30/67 (44%), Positives = 37/67 (55%)
Frame = -3
Query: 349 EKAYDKVSWDFILNILKARGFSNRWISWIXXXXXXXXXXXLINGIEGRKFKCKRGLRQGD 170
EKAYDKV W FI +LKA+ F ++W W+ +N G FK +GLRQGD
Sbjct: 548 EKAYDKVDWVFIYRMLKAKEFPDQWCDWVMKVIMGGKVAVQVNDQVGPYFKTHKGLRQGD 607
Query: 169 LLLPYLF 149
L P LF
Sbjct: 608 PLSPLLF 614
Score = 32.7 bits (73), Expect(2) = 3e-11
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -2
Query: 158 LFVLATDVFTGMIECGKNYDLIKGLGSFENG-IVSLQYVDDTILISDTN 15
LF LA +++ ++ LI+GLG +N +V LQY DDTI + N
Sbjct: 613 LFNLAAKALILLVQRAEDNLLIEGLGENDNNKVVILQYADDTIFLLPDN 661