BLASTX nr result
ID: Ophiopogon21_contig00011127
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00011127
(1241 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 273 2e-70
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 273 2e-70
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 268 7e-69
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 262 5e-67
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 261 1e-66
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 260 2e-66
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 260 2e-66
ref|XP_010929959.1| PREDICTED: cleavage and polyadenylation spec... 258 6e-66
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 258 7e-66
ref|XP_008805116.1| PREDICTED: cleavage and polyadenylation spec... 257 1e-65
ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation spec... 256 3e-65
ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Mal... 255 5e-65
ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation spec... 254 8e-65
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 254 1e-64
emb|CDP13267.1| unnamed protein product [Coffea canephora] 253 2e-64
ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation spec... 251 9e-64
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 251 9e-64
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 251 1e-63
ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation spec... 249 4e-63
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 249 4e-63
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
gi|731372808|ref|XP_010650883.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185 isoform
X2 [Vitis vinifera] gi|731372811|ref|XP_010650886.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit CG7185 isoform X2 [Vitis vinifera]
Length = 650
Score = 273 bits (699), Expect = 2e-70
Identities = 143/229 (62%), Positives = 168/229 (73%), Gaps = 6/229 (2%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
+MHPQ MMG+GFDPTYMGRGG YG F+G AF GM+P F AVN +GL+GVAPHVNPAFFGR
Sbjct: 422 LMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGR 481
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ANGMG+MG+TGM+ EEHGR TRESSYGGDDGAS+YGYGEVN
Sbjct: 482 GMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVN 541
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE-RHREEKDGXXXXXXX 664
HE+ G + ASREKERGSERD+SG SERR+RD++EQDW+RSD++ R+REEKDG
Sbjct: 542 HEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQR 601
Query: 663 XXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGKDYGKRRR 520
+NE DWDRGQ + ++DHRSRSRD DYGKRRR
Sbjct: 602 ERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRD----GDYGKRRR 646
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
isoform X1 [Vitis vinifera]
Length = 656
Score = 273 bits (699), Expect = 2e-70
Identities = 143/229 (62%), Positives = 168/229 (73%), Gaps = 6/229 (2%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
+MHPQ MMG+GFDPTYMGRGG YG F+G AF GM+P F AVN +GL+GVAPHVNPAFFGR
Sbjct: 428 LMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGR 487
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ANGMG+MG+TGM+ EEHGR TRESSYGGDDGAS+YGYGEVN
Sbjct: 488 GMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVN 547
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE-RHREEKDGXXXXXXX 664
HE+ G + ASREKERGSERD+SG SERR+RD++EQDW+RSD++ R+REEKDG
Sbjct: 548 HEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQR 607
Query: 663 XXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGKDYGKRRR 520
+NE DWDRGQ + ++DHRSRSRD DYGKRRR
Sbjct: 608 ERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRD----GDYGKRRR 652
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 268 bits (685), Expect = 7e-69
Identities = 141/226 (62%), Positives = 158/226 (69%), Gaps = 10/226 (4%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MM+PQ MMGAGFDPTYMGRGG YG F GPAF GM+ F AVN +GL+GVAPHVNPAFFGR
Sbjct: 398 MMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGR 457
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ NGMG+MGS+GM+ +EHGR TRESSYGGDDGASEYGYGE N
Sbjct: 458 GMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEAN 517
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHR-----EEKDGXXX 676
HE+GG + SRE+ERGSERD+SG SERR+RD++EQDWDRS+R HR EEKD
Sbjct: 518 HEKGGRSNAPSRERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRD 577
Query: 675 XXXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGK 541
E DWDRGQ M EDDHRSRSRDVDYGK
Sbjct: 578 HRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGK 623
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 262 bits (669), Expect = 5e-67
Identities = 136/225 (60%), Positives = 162/225 (72%), Gaps = 9/225 (4%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MMHPQNMMG GFDPTYMGRGG YG F+GP F GM+P F AVNA+GL+GVAPHVNPAFF R
Sbjct: 425 MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 483
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ANGMG+MGS+GM+ EEHGR TRESSYGGDDGAS+YGYGE N
Sbjct: 484 GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEAN 543
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 673
HE+G + ASREK+RGSERD+SG ++RR+R+++EQDWDRS+R+ RHREEKD
Sbjct: 544 HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 603
Query: 672 XXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGK 541
+ +WDRGQ + ++DHRSRSRDVDYGK
Sbjct: 604 RQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGK 648
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 261 bits (666), Expect = 1e-66
Identities = 135/225 (60%), Positives = 162/225 (72%), Gaps = 9/225 (4%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MMHPQNMMG GFDPTYMGRGG YG F+GP F GM+P F AVNA+GL+GVAPHVNPAFF R
Sbjct: 425 MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 483
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ANGMG+MGS+GM+ EEHGR TRESSYGGDDGAS+YGYGE +
Sbjct: 484 GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEAS 543
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 673
HE+G + ASREK+RGSERD+SG ++RR+R+++EQDWDRS+R+ RHREEKD
Sbjct: 544 HEKGARSTTASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 603
Query: 672 XXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGK 541
+ +WDRGQ + ++DHRSRSRDVDYGK
Sbjct: 604 RQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGK 648
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 260 bits (664), Expect = 2e-66
Identities = 135/225 (60%), Positives = 161/225 (71%), Gaps = 9/225 (4%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MMHPQNMMG GFDPTYMGRGG YG F+GP F GM+P F AVNA+GL+GVAPHVNPAFF R
Sbjct: 428 MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 486
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ANGMG+MGS+GM+ EEHGR TRESSYGGDDGAS+YGYGE N
Sbjct: 487 GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEAN 546
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 673
HE+G + ASREK+RGSERD+SG ++RR+R+++EQDWDRS+R+ RHREEKD
Sbjct: 547 HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 606
Query: 672 XXXXXXXDNEVDWDRG-QXXXXXXXXSYMQEDDHRSRSRDVDYGK 541
+ +WDRG + ++DHRSRSRDVDYGK
Sbjct: 607 RQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGK 651
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 260 bits (664), Expect = 2e-66
Identities = 135/225 (60%), Positives = 161/225 (71%), Gaps = 9/225 (4%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MMHPQNMMG GFDPTYMGRGG YG F+GP F GM+P F AVNA+GL+GVAPHVNPAFF R
Sbjct: 428 MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 486
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ANGMG+MGS+GM+ EEHGR TRESSYGGDDGAS+YGYGE N
Sbjct: 487 GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEAN 546
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 673
HE+G + ASREK+RGSERD+SG ++RR+R+++EQDWDRS+R+ RHREEKD
Sbjct: 547 HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 606
Query: 672 XXXXXXXDNEVDWDRG-QXXXXXXXXSYMQEDDHRSRSRDVDYGK 541
+ +WDRG + ++DHRSRSRDVDYGK
Sbjct: 607 RQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGK 651
>ref|XP_010929959.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Elaeis guineensis]
Length = 630
Score = 258 bits (660), Expect = 6e-66
Identities = 144/228 (63%), Positives = 163/228 (71%), Gaps = 5/228 (2%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MMHPQ MMGA FDPTYMG GGP+G F+GPAF GMMPPFQAV++VGL GVAPHVNPAFFGR
Sbjct: 404 MMHPQGMMGAAFDPTYMGGGGPFGGFSGPAFPGMMPPFQAVSSVGLPGVAPHVNPAFFGR 463
Query: 1011 GMSANGMGVMGSTGMEVQ--XXXXXXXXXXXXGEEHG-RTRESSYGGDDGASEYGYGEVN 841
GMS N MG+MGS GME GE+HG RT ESSYGGDD A++YGYGEVN
Sbjct: 464 GMSGNAMGMMGSNGMEGHSVGMWTDTGMAGWTGEDHGRRTGESSYGGDDVAADYGYGEVN 523
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHREEKDGXXXXXXXX 661
+E+ GRSNASREKERGSERD+SG+SERR RD++E++ DRSDRER+REEKD
Sbjct: 524 NEK-VGRSNASREKERGSERDWSGSSERRYRDEREKERDRSDRERYREEKDRYRDQRQRD 582
Query: 660 XXXDNEVDWDRGQXXXXXXXXSYMQEDDH-RSRSRDVDYGKDYGKRRR 520
DNE DWD G S M ++H RS SRD DYGKRRR
Sbjct: 583 RDWDNESDWDGGHSSSRSRNKSRMVPEEHYRSHSRD----PDYGKRRR 626
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 258 bits (659), Expect = 7e-66
Identities = 142/231 (61%), Positives = 165/231 (71%), Gaps = 9/231 (3%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MMHPQ MMGAGFDPTYM RGG YG F GP F GM+P F AVN +GL+GVAPHVNPAFFGR
Sbjct: 422 MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481
Query: 1011 GMSANGMGVMGSTGME--VQXXXXXXXXXXXXGEEHG-RTRESSYGGDDGASEYGYGEVN 841
GM+ NGMG+MG++GM+ G+EHG RTRESSYGG+DGASEYGYG+ N
Sbjct: 482 GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 673
HE+G S ASREKER SER++SG S+RR+RD+KEQDWDRS+RE R+REEKD
Sbjct: 542 HEKGRS-SGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREH 600
Query: 672 XXXXXXXDNEVDWDRGQXXXXXXXXSY-MQEDDHRSRSRDVDYGKDYGKRR 523
D + DWDRGQ S+ M E++HRSRSRDVDYGK KRR
Sbjct: 601 RHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGK---KRR 648
>ref|XP_008805116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Phoenix dactylifera]
Length = 630
Score = 257 bits (657), Expect = 1e-65
Identities = 140/221 (63%), Positives = 159/221 (71%), Gaps = 5/221 (2%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MMHPQ MMGA FDPTYMG GGPYG F+GPAF GMMPPFQAV++VGL GVAPHVNPAFFGR
Sbjct: 404 MMHPQGMMGAAFDPTYMGGGGPYGGFSGPAFPGMMPPFQAVSSVGLPGVAPHVNPAFFGR 463
Query: 1011 GMSANGMGVMGSTGME--VQXXXXXXXXXXXXGEEHG-RTRESSYGGDDGASEYGYGEVN 841
GMS N MG+MG GME GE+HG RTRESSYGGDD A++YGYGEVN
Sbjct: 464 GMSGNAMGMMGGNGMEGHSAGMWTDMGIGGWTGEDHGRRTRESSYGGDDVAADYGYGEVN 523
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHREEKDGXXXXXXXX 661
+ER RSNASREKERGSERD+SG+SERR RD++E++ DRSD+ER+REEKD
Sbjct: 524 NER-VERSNASREKERGSERDWSGSSERRYRDEREKERDRSDKERYREEKDRYMDHRQRD 582
Query: 660 XXXDNEVDWDRG-QXXXXXXXXSYMQEDDHRSRSRDVDYGK 541
DNE DWD G +QE+ +RS SRD DYGK
Sbjct: 583 RDWDNEGDWDGGHSSSRSRNKSRTVQEEYYRSHSRDADYGK 623
>ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Malus domestica]
Length = 656
Score = 256 bits (654), Expect = 3e-65
Identities = 139/233 (59%), Positives = 160/233 (68%), Gaps = 10/233 (4%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MM+PQ MMG+GFDPTYMGRGG YG F GPAF GM+P F VN +GL+GVAPHVNPAFFGR
Sbjct: 425 MMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPHVNPAFFGR 484
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ NGMG+MGS+GME EEHGR TRESSYGGDD ASEYGYG+ N
Sbjct: 485 GMATNGMGMMGSSGMEGHHAGMWNDPSMGTWGGEEHGRRTRESSYGGDDNASEYGYGDTN 544
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDR-----ERHREEKDGXXX 676
+E+G S ASRE+ERGSERD+SG SERR+RDD+EQD++RS+R R++EEKD
Sbjct: 545 NEKGPRSSAASRERERGSERDWSGNSERRHRDDREQDYERSERGEQREHRYKEEKDSYRD 604
Query: 675 XXXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGKDYGKRRR 520
E DWDRGQ + EDDHRSRSRDVDY KRRR
Sbjct: 605 HRQRDRDGGYEDDWDRGQSSSRPRSRSKAVPEDDHRSRSRDVDY-----KRRR 652
>ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Malus domestica]
gi|657994880|ref|XP_008389756.1| PREDICTED: RNA-binding
protein FUS-like [Malus domestica]
Length = 658
Score = 255 bits (652), Expect = 5e-65
Identities = 140/235 (59%), Positives = 159/235 (67%), Gaps = 12/235 (5%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MM+PQ MMG+GFDPTYMGRGG YG F GPAF GM+P F VN +GL+GVAPHVNPAFFGR
Sbjct: 425 MMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPHVNPAFFGR 484
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ANGMG+MGS+GME EEHGR TRESSYGGDD ASEYGYG+ N
Sbjct: 485 GMAANGMGMMGSSGMEGHHAGMWNDPSMGAWGGEEHGRRTRESSYGGDDNASEYGYGDTN 544
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHR-----EEKDGXXX 676
+E+G S ASRE+ERGSERD+SG SERR+RD +EQD++RS+R HR EEKD
Sbjct: 545 NEKGARSSAASRERERGSERDWSGNSERRHRDGREQDFERSERGEHREHRYKEEKDSYRE 604
Query: 675 XXXXXXXXDNEVDWDRGQ---XXXXXXXXSYMQEDDHRSRSRDVDYGKDYGKRRR 520
E DWDRGQ + EDDHRSRSRDVDY KRRR
Sbjct: 605 HRQRDRDGVYEDDWDRGQSSSRPRSRSRSKAVPEDDHRSRSRDVDY-----KRRR 654
>ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Pyrus x bretschneideri]
Length = 656
Score = 254 bits (650), Expect = 8e-65
Identities = 139/233 (59%), Positives = 158/233 (67%), Gaps = 10/233 (4%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MM+PQ MMG+GFDPTYMGRGG YG F GPAF GM+P F VN +GL+GVAPHVNPAFF R
Sbjct: 425 MMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPHVNPAFFAR 484
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ NGMG+MGS+GME EEHGR TRESSYGGDD ASEYGYG+ N
Sbjct: 485 GMATNGMGMMGSSGMEGHHAGMWNDPSMGAWGGEEHGRRTRESSYGGDDNASEYGYGDTN 544
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHR-----EEKDGXXX 676
+E+G S ASRE+ERGSERD+SG SERR+RDD+EQD++RS+R HR EEKD
Sbjct: 545 NEKGPRSSAASRERERGSERDWSGNSERRHRDDREQDYERSERGEHREHRYKEEKDSYRD 604
Query: 675 XXXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGKDYGKRRR 520
E DWDRGQ + EDDHRSRSRDVDY KRRR
Sbjct: 605 HRQRDRDGGYEDDWDRGQSSSRPRSRSKAVPEDDHRSRSRDVDY-----KRRR 652
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 254 bits (648), Expect = 1e-64
Identities = 136/224 (60%), Positives = 156/224 (69%), Gaps = 8/224 (3%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
M+ PQ+MM AGFDPTYMGRG YG F GP F GM+P F AVNA+GL+GVAPHVNPAFFGR
Sbjct: 414 MLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 473
Query: 1011 GMSANGMGVMGSTGME-VQXXXXXXXXXXXXGEEHGR-TRESSYGGDDGASEYGYGEVNH 838
GM+ NGMG+MG +GM+ GEE GR TRESSYGGDDGASEYGYGEVNH
Sbjct: 474 GMAPNGMGMMGPSGMDGPNAGMWSDTSMGGWGEEPGRRTRESSYGGDDGASEYGYGEVNH 533
Query: 837 ERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXXX 670
E+G S ASREKER SERD+SG S+RR+RDD+E DWDRS+RE R+REEK+
Sbjct: 534 EKGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDHR 593
Query: 669 XXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGK 541
E DWDRGQ + E+D+RSRSRD DYGK
Sbjct: 594 QRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGK 637
>emb|CDP13267.1| unnamed protein product [Coffea canephora]
Length = 655
Score = 253 bits (646), Expect = 2e-64
Identities = 133/220 (60%), Positives = 157/220 (71%), Gaps = 4/220 (1%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
+MHPQ MMG GFDPTYMGRG YG F+GPAF GM+PPF AVN +GL+GVAPHVNPAFFGR
Sbjct: 429 LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNHMGLAGVAPHVNPAFFGR 488
Query: 1011 GMSANGMGVMGSTGME-VQXXXXXXXXXXXXGEEHGR-TRESSYGGDDGASEYGYGEVNH 838
GM+ANGMG+MG+ GM+ GEEHGR TRESSYGG+D ASEYGYGE +H
Sbjct: 489 GMAANGMGMMGTGGMDGPHAGMWTDTSMGWGGEEHGRRTRESSYGGEDNASEYGYGEASH 548
Query: 837 ERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE-RHREEKDGXXXXXXXX 661
++G S ASREKERGSERD+SG+S+RR+RD++E D DR DR+ R+REEKD
Sbjct: 549 DKGVRSSAASREKERGSERDWSGSSDRRHRDEREHDRDRYDRDHRYREEKDSYREYRHKE 608
Query: 660 XXXDNEVDWDRGQXXXXXXXXSYMQEDDHRSRSRDVDYGK 541
E D+DRGQ + E+ HRSRSRD DYGK
Sbjct: 609 RDPGYEDDYDRGQPSRSRSRSRAVPEEHHRSRSRDADYGK 648
>ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Jatropha curcas] gi|802723892|ref|XP_012085552.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 6-like [Jatropha curcas]
gi|802723894|ref|XP_012085553.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
[Jatropha curcas] gi|643714049|gb|KDP26714.1|
hypothetical protein JCGZ_17872 [Jatropha curcas]
Length = 656
Score = 251 bits (641), Expect = 9e-64
Identities = 136/229 (59%), Positives = 156/229 (68%), Gaps = 13/229 (5%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MM PQNMMGAGFDPTYMGRG YG F GP F GM+P F AVNA+GL+GVAPHVNPAFFGR
Sbjct: 421 MMPPQNMMGAGFDPTYMGRGAAYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 480
Query: 1011 GMSANGMGVMGSTGME-VQXXXXXXXXXXXXGEEHGR-TRESSYGGDDGASEYGYGEVNH 838
GM+ NGMG+MG +GM+ GEE GR TRESSYGGDDGASEYGYGEVN+
Sbjct: 481 GMAPNGMGMMGPSGMDGPNAGMWSDTSMSGWGEEPGRRTRESSYGGDDGASEYGYGEVNN 540
Query: 837 ERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE---------RHREEKDG 685
E+G S ASREKER ERD+SG S+RR+RD++E +WDRS+RE R+REEKD
Sbjct: 541 EKGARSSAASREKERVPERDWSGNSDRRHRDEREHEWDRSEREHREREHRDQRYREEKDS 600
Query: 684 XXXXXXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGK 541
E DWDRGQ + E+D+RSRSRD DYGK
Sbjct: 601 YREHRQRERDSGYEDDWDRGQSSSKSRTRSRAVPEEDYRSRSRDADYGK 649
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 251 bits (641), Expect = 9e-64
Identities = 136/226 (60%), Positives = 161/226 (71%), Gaps = 9/226 (3%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MMHPQ MMGAGFDPTYM RGG YG F GP F GM+P F AVN +GL+GVAPHVNPAFFGR
Sbjct: 422 MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481
Query: 1011 GMSANGMGVMGSTGME--VQXXXXXXXXXXXXGEEHG-RTRESSYGGDDGASEYGYGEVN 841
GM+ NGMG+MG++GM+ G+EHG RTRESSYGG+DGASEYGYG+ N
Sbjct: 482 GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 673
HE+G S ASREKER SER++SG S+RR+RD+KEQDWDRS+RE R+REEKD
Sbjct: 542 HEKGRS-SGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREH 600
Query: 672 XXXXXXXDNEVDWDRGQXXXXXXXXSY-MQEDDHRSRSRDVDYGKD 538
D + DWDRGQ S+ M E++HRSRSRDV Y ++
Sbjct: 601 RHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVGYREE 646
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 251 bits (640), Expect = 1e-63
Identities = 131/222 (59%), Positives = 157/222 (70%), Gaps = 6/222 (2%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
+MHPQ MMG GFDP++MGRG YG F+GPAF GMMPPFQAVN +GL GVAPHVNPAFFGR
Sbjct: 420 LMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFFGR 479
Query: 1011 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 841
GM+ANGMG+M + GM+ EEHGR TRESSYGG+D ASEYGYGEV+
Sbjct: 480 GMAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVS 539
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE-RHREEKDGXXXXXXX 664
H++G S SREKERGSERD+SG S++R+RD++E D DR D+E R+REE+DG
Sbjct: 540 HDKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYRQK 599
Query: 663 XXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGK 541
+ E D+DRGQ QE+DHRSRSRD +YGK
Sbjct: 600 ERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGK 641
>ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Jatropha curcas] gi|802723858|ref|XP_012085541.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 6-like [Jatropha curcas]
gi|643714040|gb|KDP26705.1| hypothetical protein
JCGZ_17863 [Jatropha curcas]
Length = 651
Score = 249 bits (635), Expect = 4e-63
Identities = 134/224 (59%), Positives = 153/224 (68%), Gaps = 8/224 (3%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MM PQNMMG GFDPTYMGRG YG F GP F GM+P F AVNA+GL+GVAPHVNPAFFGR
Sbjct: 421 MMPPQNMMGGGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 480
Query: 1011 GMSANGMGVMGSTGME-VQXXXXXXXXXXXXGEEHGR-TRESSYGGDDGASEYGYGEVNH 838
GM+ NGMG+MG + M+ GEE GR TRESSYGGDDGASEYGYGEVN+
Sbjct: 481 GMAPNGMGMMGPSAMDGPNAGMWSDTSMGGWGEEPGRRTRESSYGGDDGASEYGYGEVNN 540
Query: 837 ERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXXX 670
E+G S ASREKER ERD+SG S+RR+RD++E DWDRS+RE R+REEKD
Sbjct: 541 EKGTRSSAASREKERAPERDWSGNSDRRHRDEREHDWDRSEREHREHRYREEKDSYREHR 600
Query: 669 XXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDDHRSRSRDVDYGK 541
E DWDRGQ + E+D+R RSRD DYGK
Sbjct: 601 RRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRPRSRDADYGK 644
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 249 bits (635), Expect = 4e-63
Identities = 136/225 (60%), Positives = 158/225 (70%), Gaps = 9/225 (4%)
Frame = -3
Query: 1188 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHVNPAFFGR 1012
MMHPQ MMGAGFDPTYMGRGG YG F GP F GM+P F AVN +GL+GVAPHVNPAFFGR
Sbjct: 423 MMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPAFFGR 482
Query: 1011 GMSANGMGVMGSTGMEVQ--XXXXXXXXXXXXGEEHG-RTRESSYGGDDGASEYGYGEVN 841
GM+ NGMG+MG GM+ G+EHG RTRESSYGG+DGASEYGYG+ N
Sbjct: 483 GMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 542
Query: 840 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 673
HE+G S ASREKER S+R++SG S+RR+RD+KE+DWDRS+RE R+REEKD
Sbjct: 543 HEKGRS-SGASREKERVSDREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREH 601
Query: 672 XXXXXXXDNEVDWDRGQXXXXXXXXSY-MQEDDHRSRSRDVDYGK 541
D + D DRGQ S+ M E+ RSRSRDVDYGK
Sbjct: 602 RHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGK 646