BLASTX nr result

ID: Ophiopogon21_contig00010993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00010993
         (588 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010921750.1| PREDICTED: DNA polymerase zeta catalytic sub...    73   9e-11
ref|XP_010921749.1| PREDICTED: DNA polymerase zeta catalytic sub...    73   9e-11
ref|XP_008802105.1| PREDICTED: DNA polymerase zeta catalytic sub...    66   1e-08

>ref|XP_010921750.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform X2 [Elaeis
            guineensis]
          Length = 1891

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
 Frame = -2

Query: 473  KSLLVENSNVEVLDFHNCERQPVDEPFKEKV--------DSCTRNLTAVPVEQSLTHNLR 318
            K ++ + SN  VL  H+  +    E  +E +        D CT N+  +  EQ + H+  
Sbjct: 616  KKMISDGSNYHVLP-HDILQVRSSEIVQENIMSWEGCKHDVCTSNI--LNEEQVILHSDS 672

Query: 317  EHKSNHDNEITQESFVQTHFNRNGESDSVLD------KDIQNGENDFNADRRNNLLNPDF 156
            +H S HD+EI  E FV+ H + + +S S  D       D+ +GE        N+   PD 
Sbjct: 673  KHISEHDDEIAPEGFVEAHISSHTDSYSAFDTNVLQTNDLVSGEGGAG----NSSAYPDC 728

Query: 155  ETSIDLNKIKDTSAYVEMAWSRKPPSRDEVGKYPEDSVGTTGHAENVADIH 3
            +     N  K    Y+EM + RKPPS+D++    EDS G TG      + H
Sbjct: 729  KICSGSNMEKTPVEYIEMTFGRKPPSKDQIEMISEDSPGATGQLVGPVNAH 779


>ref|XP_010921749.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform X1 [Elaeis
            guineensis]
          Length = 1921

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
 Frame = -2

Query: 473  KSLLVENSNVEVLDFHNCERQPVDEPFKEKV--------DSCTRNLTAVPVEQSLTHNLR 318
            K ++ + SN  VL  H+  +    E  +E +        D CT N+  +  EQ + H+  
Sbjct: 646  KKMISDGSNYHVLP-HDILQVRSSEIVQENIMSWEGCKHDVCTSNI--LNEEQVILHSDS 702

Query: 317  EHKSNHDNEITQESFVQTHFNRNGESDSVLD------KDIQNGENDFNADRRNNLLNPDF 156
            +H S HD+EI  E FV+ H + + +S S  D       D+ +GE        N+   PD 
Sbjct: 703  KHISEHDDEIAPEGFVEAHISSHTDSYSAFDTNVLQTNDLVSGEGGAG----NSSAYPDC 758

Query: 155  ETSIDLNKIKDTSAYVEMAWSRKPPSRDEVGKYPEDSVGTTGHAENVADIH 3
            +     N  K    Y+EM + RKPPS+D++    EDS G TG      + H
Sbjct: 759  KICSGSNMEKTPVEYIEMTFGRKPPSKDQIEMISEDSPGATGQLVGPVNAH 809


>ref|XP_008802105.1| PREDICTED: DNA polymerase zeta catalytic subunit [Phoenix
            dactylifera]
          Length = 1965

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 9/166 (5%)
 Frame = -2

Query: 473  KSLLVENSNVEVLDF---HNCERQPVDEPFKE----KVDSCTRNLTAVPVEQSLTHNLRE 315
            K+++ E SN  VL     H    + V E        K D CT ++ +   EQ + H+  +
Sbjct: 707  KNMISEGSNYHVLPLDTLHVRSSEIVQENIMSGEGCKQDVCTSSILSE--EQVILHSDSK 764

Query: 314  HKSNHDNEITQESFVQTHFNRNGESDSVLDKDIQNGENDFNAD--RRNNLLNPDFETSID 141
            H   HD ++  E F +TH +   +S S  D ++    N  + +    N+ + PD +T   
Sbjct: 765  HICKHDADVAPEVFAETHISSQTDSYSAFDTNLLQTNNLVSGEGGAGNSSVYPDCKTCSG 824

Query: 140  LNKIKDTSAYVEMAWSRKPPSRDEVGKYPEDSVGTTGHAENVADIH 3
             N  K     +EM + RKPPS+D++    ED  G TG      + H
Sbjct: 825  SNMEKTPLECIEMTFGRKPPSKDQIEMISEDFPGATGRLVGPLNAH 870


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