BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00010940
         (421 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III s...   172   9e-41
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s...   171   2e-40
ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III s...   158   2e-36
ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III s...   158   2e-36
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s...   145   9e-33
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s...   145   9e-33
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s...   145   1e-32
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr...   145   1e-32
gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [...   144   2e-32
ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III s...   143   4e-32
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu...   141   2e-31
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...   140   3e-31
ref|XP_011003010.1| PREDICTED: DNA-directed RNA polymerase III s...   137   2e-30
ref|XP_011003009.1| PREDICTED: DNA-directed RNA polymerase III s...   137   2e-30
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu...   137   3e-30
ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6...   137   3e-30
ref|XP_011048175.1| PREDICTED: DNA-directed RNA polymerase III s...   135   1e-29
ref|XP_014497473.1| PREDICTED: probable DNA-directed RNA polymer...   132   1e-28
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   131   2e-28
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              131   2e-28

>ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
           dactylifera] gi|672187704|ref|XP_008813400.1| PREDICTED:
           DNA-directed RNA polymerase III subunit rpc6 [Phoenix
           dactylifera]
          Length = 232

 Score =  172 bits (436), Expect = 9e-41
 Identities = 84/136 (61%), Positives = 108/136 (79%)
 Frame = -3

Query: 410 GFPPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAF 231
           G   TV+ K LKSLQ KNLIK+V ++ +K RKI M VEFEPS+EISGG+WY DG+LD  F
Sbjct: 47  GLQTTVVTKTLKSLQNKNLIKDVVNIHNKARKIYMAVEFEPSKEISGGSWYSDGSLDTDF 106

Query: 230 IKILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKS 51
           I+ILR+QC + +E L+VAT E I KSI++SRVF ++ T+QQI EIV  MVLDKEV++LKS
Sbjct: 107 IRILREQCLKHIERLQVATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEVEELKS 166

Query: 50  SGVGEFSHVMAGKECY 3
           +G+G+FS V +GK CY
Sbjct: 167 TGIGDFSKVQSGKICY 182


>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis] gi|743806633|ref|XP_010927733.1| PREDICTED:
           DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis] gi|743806635|ref|XP_010927734.1| PREDICTED:
           DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis] gi|743806637|ref|XP_010927735.1| PREDICTED:
           DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis]
          Length = 237

 Score =  171 bits (433), Expect = 2e-40
 Identities = 81/136 (59%), Positives = 109/136 (80%)
 Frame = -3

Query: 410 GFPPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAF 231
           G   TV+ K LKSLQ KNLIK+V ++ +K RKI M +EFEPS+EISGG+WY DG+LD+ F
Sbjct: 52  GLQTTVVTKTLKSLQNKNLIKDVVNIHNKARKIYMAMEFEPSKEISGGSWYSDGSLDIEF 111

Query: 230 IKILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKS 51
           I+ILR+QC + +E L++AT E I KSI++SRVF ++ T+QQI EIV  MVLDKE+++LKS
Sbjct: 112 IRILREQCLKHIERLQIATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEIEELKS 171

Query: 50  SGVGEFSHVMAGKECY 3
           +G+G+FS V +GK CY
Sbjct: 172 TGIGDFSKVPSGKICY 187


>ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
           acuminata subsp. malaccensis]
           gi|695003580|ref|XP_009386160.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc6-like [Musa acuminata
           subsp. malaccensis]
          Length = 237

 Score =  158 bits (399), Expect = 2e-36
 Identities = 79/136 (58%), Positives = 100/136 (73%)
 Frame = -3

Query: 410 GFPPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAF 231
           G    V+ KALKSLQ KNLIK+V +V +K RKI M VEFEPS+E+SGG+WY +G+LD  F
Sbjct: 52  GLQNIVVTKALKSLQNKNLIKDVVNVHNKARKIFMAVEFEPSKEVSGGSWYSEGSLDTEF 111

Query: 230 IKILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKS 51
           I ILR+ C + +E+LKVAT E I KSI  S V  +  T+QQ+ EIV  + LDKE+++LKS
Sbjct: 112 INILRKMCLKHIEELKVATIEDIWKSISASGVLKVACTMQQVLEIVRALALDKEIEELKS 171

Query: 50  SGVGEFSHVMAGKECY 3
           +GVGEFS V  GK CY
Sbjct: 172 TGVGEFSTVQTGKVCY 187


>ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
           acuminata subsp. malaccensis]
          Length = 237

 Score =  158 bits (399), Expect = 2e-36
 Identities = 75/136 (55%), Positives = 101/136 (74%)
 Frame = -3

Query: 410 GFPPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAF 231
           G    ++ KALKSLQ+KNLIK+V +V +K+RK  M VEFEPS+E+SGG+WY DG+LD  F
Sbjct: 52  GIQNIIVTKALKSLQSKNLIKDVVNVHNKSRKTFMAVEFEPSKEVSGGSWYSDGSLDTEF 111

Query: 230 IKILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKS 51
           I ILR  C + +EDL++AT E I K I  SR+  ++ T+QQ+ EIV  + LDKE+++LKS
Sbjct: 112 INILRMMCLKHIEDLRIATIEDIHKCIAASRIMKVECTMQQVLEIVRALALDKEIEELKS 171

Query: 50  SGVGEFSHVMAGKECY 3
           +GV EFS V +GK CY
Sbjct: 172 TGVAEFSMVQSGKICY 187


>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X2 [Citrus sinensis]
          Length = 234

 Score =  145 bits (367), Expect = 9e-33
 Identities = 69/137 (50%), Positives = 99/137 (72%)
 Frame = -3

Query: 413 IGFPPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVA 234
           +  P  ++ K++KSLQ K+LIKEV ++ +K +K +M VEFEPS+EISGG WY +G+LD  
Sbjct: 47  VNLPDNIVTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTE 106

Query: 233 FIKILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLK 54
           FIK+++ QC + +  LKVAT E I  SIK S  F +D+T QQI EIV  +VLD ++ ++K
Sbjct: 107 FIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVK 166

Query: 53  SSGVGEFSHVMAGKECY 3
           S+G GEF+++  GK CY
Sbjct: 167 SNGSGEFTNIPVGKVCY 183


>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X1 [Citrus sinensis]
          Length = 252

 Score =  145 bits (367), Expect = 9e-33
 Identities = 69/137 (50%), Positives = 99/137 (72%)
 Frame = -3

Query: 413 IGFPPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVA 234
           +  P  ++ K++KSLQ K+LIKEV ++ +K +K +M VEFEPS+EISGG WY +G+LD  
Sbjct: 65  VNLPDNIVTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTE 124

Query: 233 FIKILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLK 54
           FIK+++ QC + +  LKVAT E I  SIK S  F +D+T QQI EIV  +VLD ++ ++K
Sbjct: 125 FIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVK 184

Query: 53  SSGVGEFSHVMAGKECY 3
           S+G GEF+++  GK CY
Sbjct: 185 SNGSGEFTNIPVGKVCY 201


>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Citrus sinensis]
          Length = 233

 Score =  145 bits (366), Expect = 1e-32
 Identities = 69/137 (50%), Positives = 98/137 (71%)
 Frame = -3

Query: 413 IGFPPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVA 234
           +  P  ++ K++KSLQ K+LIKEV ++  K +K +M VEFEPS+EISGG WY +G+LD  
Sbjct: 46  VNLPDNIVTKSIKSLQNKSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTE 105

Query: 233 FIKILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLK 54
           FIK+++ QC + +  LKVAT E I  SIK S  F +D+T QQI EIV  +VLD ++ ++K
Sbjct: 106 FIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVK 165

Query: 53  SSGVGEFSHVMAGKECY 3
           S+G GEF+++  GK CY
Sbjct: 166 SNGSGEFTNIPVGKVCY 182


>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
           gi|557529238|gb|ESR40488.1| hypothetical protein
           CICLE_v10026399mg [Citrus clementina]
           gi|641825965|gb|KDO45213.1| hypothetical protein
           CISIN_1g026766mg [Citrus sinensis]
           gi|641825966|gb|KDO45214.1| hypothetical protein
           CISIN_1g026766mg [Citrus sinensis]
          Length = 233

 Score =  145 bits (366), Expect = 1e-32
 Identities = 69/137 (50%), Positives = 98/137 (71%)
 Frame = -3

Query: 413 IGFPPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVA 234
           +  P  ++ K++KSLQ K+LIKEV ++  K +K +M VEFEPS+EISGG WY +G+LD  
Sbjct: 46  VNLPDNIVTKSIKSLQNKSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTE 105

Query: 233 FIKILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLK 54
           FIK+++ QC + +  LKVAT E I  SIK S  F +D+T QQI EIV  +VLD ++ ++K
Sbjct: 106 FIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVK 165

Query: 53  SSGVGEFSHVMAGKECY 3
           S+G GEF+++  GK CY
Sbjct: 166 SNGSGEFTNIPVGKVCY 182


>gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [Citrus sinensis]
          Length = 234

 Score =  144 bits (364), Expect = 2e-32
 Identities = 68/137 (49%), Positives = 99/137 (72%)
 Frame = -3

Query: 413 IGFPPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVA 234
           +  P  ++ K++KSLQ K+LIKEV ++ +K +K +M VEFEPS++ISGG WY +G+LD  
Sbjct: 47  VNLPDNIVTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKDISGGAWYSEGSLDTE 106

Query: 233 FIKILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLK 54
           FIK+++ QC + +  LKVAT E I  SIK S  F +D+T QQI EIV  +VLD ++ ++K
Sbjct: 107 FIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVK 166

Query: 53  SSGVGEFSHVMAGKECY 3
           S+G GEF+++  GK CY
Sbjct: 167 SNGSGEFTNIPVGKVCY 183


>ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Jatropha
           curcas] gi|317106726|dbj|BAJ53222.1| JHL06P13.1
           [Jatropha curcas] gi|643729216|gb|KDP37096.1|
           hypothetical protein JCGZ_06152 [Jatropha curcas]
          Length = 235

 Score =  143 bits (361), Expect = 4e-32
 Identities = 69/134 (51%), Positives = 97/134 (72%)
 Frame = -3

Query: 404 PPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIK 225
           P TV+NK+LK LQ KNLIKEV ++++K RK  M  EFEPS+EI+GGTWY +G LD  FI 
Sbjct: 52  PDTVVNKSLKVLQAKNLIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIG 111

Query: 224 ILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 45
           +L+ QC++ +E LKVAT E +   I  + V  + +T QQI EI++ +VLD +V ++KS+G
Sbjct: 112 VLKDQCKKQIEKLKVATVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNG 171

Query: 44  VGEFSHVMAGKECY 3
           +GEF+ +  GK CY
Sbjct: 172 MGEFASIPVGKVCY 185


>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
           gi|550346475|gb|EEE82426.2| hypothetical protein
           POPTR_0001s04090g [Populus trichocarpa]
          Length = 291

 Score =  141 bits (356), Expect = 2e-31
 Identities = 68/134 (50%), Positives = 95/134 (70%)
 Frame = -3

Query: 404 PPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIK 225
           P  V+NK+LK+L+ KNLIKEV ++++K RK  M  EFEPS+EISGG WY +G+LD  FI+
Sbjct: 107 PDNVVNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIE 166

Query: 224 ILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 45
            LRQ C+R +E   VAT E +  SI     FN+D+T QQI EI+  ++LD  + ++KS+G
Sbjct: 167 SLRQLCKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNG 226

Query: 44  VGEFSHVMAGKECY 3
           +GEF+ +  GK CY
Sbjct: 227 MGEFASIPFGKVCY 240


>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score =  140 bits (354), Expect = 3e-31
 Identities = 71/134 (52%), Positives = 96/134 (71%)
 Frame = -3

Query: 404 PPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIK 225
           P  V+NK+LK LQ KNLIKEV ++++K RK  M  EFEPS+EI+GG WY +G LD  FIK
Sbjct: 52  PDNVVNKSLKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIK 111

Query: 224 ILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 45
           +L++ C + +  LKVAT E I  SIK S +FN ++T QQI EIV+ +VLD  + ++KS+G
Sbjct: 112 LLKEVCTKQVLKLKVATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNG 171

Query: 44  VGEFSHVMAGKECY 3
           + EFS +  GK CY
Sbjct: 172 MLEFSFIPIGKVCY 185


>ref|XP_011003010.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X2 [Populus euphratica]
          Length = 258

 Score =  137 bits (346), Expect = 2e-30
 Identities = 66/134 (49%), Positives = 94/134 (70%)
 Frame = -3

Query: 404 PPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIK 225
           P  V+NK+LK+LQ K LIKEV ++++K RK  M  EFEPS+EISGG WY +G+LD  FI+
Sbjct: 74  PDNVVNKSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIE 133

Query: 224 ILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 45
            L+Q C+R +E   VAT E +  SI     FN+D+T QQI EI+  ++LD  + ++KS+G
Sbjct: 134 SLKQLCKRQIERSGVATLEAVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNG 193

Query: 44  VGEFSHVMAGKECY 3
           +GEF+ +  G+ CY
Sbjct: 194 MGEFASIPFGEVCY 207


>ref|XP_011003009.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X1 [Populus euphratica]
          Length = 239

 Score =  137 bits (346), Expect = 2e-30
 Identities = 66/134 (49%), Positives = 94/134 (70%)
 Frame = -3

Query: 404 PPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIK 225
           P  V+NK+LK+LQ K LIKEV ++++K RK  M  EFEPS+EISGG WY +G+LD  FI+
Sbjct: 55  PDNVVNKSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIE 114

Query: 224 ILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 45
            L+Q C+R +E   VAT E +  SI     FN+D+T QQI EI+  ++LD  + ++KS+G
Sbjct: 115 SLKQLCKRQIERSGVATLEAVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNG 174

Query: 44  VGEFSHVMAGKECY 3
           +GEF+ +  G+ CY
Sbjct: 175 MGEFASIPFGEVCY 188


>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
           gi|222866141|gb|EEF03272.1| hypothetical protein
           POPTR_0018s04220g [Populus trichocarpa]
          Length = 239

 Score =  137 bits (345), Expect = 3e-30
 Identities = 66/134 (49%), Positives = 94/134 (70%)
 Frame = -3

Query: 404 PPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIK 225
           P  V+NK+LK+LQ K LIKEV ++++K RK  M  EFEPS+EISGG WY +G+LD  FI+
Sbjct: 55  PDNVVNKSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIE 114

Query: 224 ILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 45
            L+Q C+R +E   VAT E +  SI     FN+D+T QQI EI+  ++LD  + ++KS+G
Sbjct: 115 SLKQLCKRQIERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNG 174

Query: 44  VGEFSHVMAGKECY 3
           +GEF+ +  G+ CY
Sbjct: 175 MGEFASIPFGEVCY 188


>ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
           [Theobroma cacao] gi|590615245|ref|XP_007023169.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao] gi|508778534|gb|EOY25790.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao] gi|508778535|gb|EOY25791.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao]
          Length = 237

 Score =  137 bits (345), Expect = 3e-30
 Identities = 67/137 (48%), Positives = 95/137 (69%)
 Frame = -3

Query: 413 IGFPPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVA 234
           I  P  ++ K LKSL  KNLIKEV +++++ RK  +  EFEPS EI+GG WY +G+LD  
Sbjct: 50  INLPDNLVTKCLKSLLAKNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTE 109

Query: 233 FIKILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLK 54
           +I +L++QC R +  LKVAT E +  +IK S V  ++++ QQI EIV+ +VLD EV ++K
Sbjct: 110 YINVLKEQCWRKIYGLKVATLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVK 169

Query: 53  SSGVGEFSHVMAGKECY 3
           SSG GEF+ +  GK CY
Sbjct: 170 SSGTGEFASIPVGKVCY 186


>ref|XP_011048175.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Populus euphratica] gi|743909396|ref|XP_011048177.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           RPC6-like [Populus euphratica]
           gi|743909398|ref|XP_011048178.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC6-like [Populus
           euphratica]
          Length = 239

 Score =  135 bits (340), Expect = 1e-29
 Identities = 65/134 (48%), Positives = 93/134 (69%)
 Frame = -3

Query: 404 PPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIK 225
           P  V+NK+LK+L+ KNLIKEV ++++K RK  M  EFEPS+EISGG WY +G+LD  FI+
Sbjct: 55  PDNVVNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIE 114

Query: 224 ILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 45
            LRQ C+R +E   VAT   +   I     FN+D+T QQI EI+  ++LD  + ++KS+G
Sbjct: 115 SLRQLCKRQIEKKGVATLVEVTDMINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNG 174

Query: 44  VGEFSHVMAGKECY 3
           +GEF+ +  G+ CY
Sbjct: 175 MGEFASIPFGEVCY 188


>ref|XP_014497473.1| PREDICTED: probable DNA-directed RNA polymerase III subunit rpc6
           [Vigna radiata var. radiata]
          Length = 239

 Score =  132 bits (331), Expect = 1e-28
 Identities = 63/134 (47%), Positives = 94/134 (70%)
 Frame = -3

Query: 404 PPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIK 225
           P +++ K+LK LQ+KNLIKEV ++++K RK  M  EFEPS+EI+GG WY  G+LD  FI 
Sbjct: 55  PDSIVKKSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTYFIN 114

Query: 224 ILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 45
           +++  C + +   KVATC+ I +  + S VF + IT QQ  EI+  +VLD E++++KS+G
Sbjct: 115 LVKDVCLKYIFRQKVATCDGILEWSRKSGVFTVGITAQQTDEILRALVLDDEIEEVKSTG 174

Query: 44  VGEFSHVMAGKECY 3
           +G+FS V  G+ CY
Sbjct: 175 IGDFSSVPVGRICY 188


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  131 bits (330), Expect = 2e-28
 Identities = 65/134 (48%), Positives = 92/134 (68%)
 Frame = -3

Query: 404 PPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIK 225
           P  V+ K+LK+LQ K LIKEV +++ K RK  M VEFEPS+E++GG WY +G LD  +IK
Sbjct: 54  PDNVVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIK 113

Query: 224 ILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 45
           IL++ C R++  LKVAT E I +SI  + +   + + QQI EI+  +VLD E+ +++SSG
Sbjct: 114 ILKETCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSG 173

Query: 44  VGEFSHVMAGKECY 3
            GEFS +  G  CY
Sbjct: 174 SGEFSSIPIGAVCY 187


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  131 bits (329), Expect = 2e-28
 Identities = 65/134 (48%), Positives = 92/134 (68%)
 Frame = -3

Query: 404 PPTVINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIK 225
           P  V+ K+LK+LQ K LIKEV +++ K RK  M VEFEPS+E++GG WY +G LD  +IK
Sbjct: 115 PDNVVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIK 174

Query: 224 ILRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 45
           IL++ C R++  LKVAT E I +SI  + +   + + QQI EI+  +VLD E+ +++SSG
Sbjct: 175 ILKKTCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSG 234

Query: 44  VGEFSHVMAGKECY 3
            GEFS +  G  CY
Sbjct: 235 SGEFSSIPIGAVCY 248