BLASTX nr result

ID: Ophiopogon21_contig00009277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00009277
         (356 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010905853.1| PREDICTED: F-box protein At2g17036-like [Ela...    72   2e-10
ref|XP_010905854.1| PREDICTED: putative F-box protein At4g22660 ...    64   3e-08
ref|XP_010909846.1| PREDICTED: putative F-box protein At4g22660 ...    64   6e-08
ref|XP_010940778.1| PREDICTED: F-box protein SKIP23-like [Elaeis...    63   7e-08
ref|XP_010909847.1| PREDICTED: putative F-box protein At4g22660 ...    62   2e-07
ref|XP_010940779.1| PREDICTED: LOW QUALITY PROTEIN: putative F-b...    57   5e-06

>ref|XP_010905853.1| PREDICTED: F-box protein At2g17036-like [Elaeis guineensis]
          Length = 419

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 50/115 (43%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
 Frame = -1

Query: 356 LSPSLDTVVVVHRGLVGTESEHLAFSRIGGGSSWTALRSPDHC-FEDVIFHKGRLHAVNC 180
           L PS   V V+H G        LAF+R  G  SWT L+ P    F D+IF KG LHA++ 
Sbjct: 166 LHPSSAVVAVIHGGF-----NDLAFAR-AGDESWTELQPPQPLTFMDIIFRKGLLHALST 219

Query: 179 WGRLSVFDEDLDNPSDPPMRSRNEP-----LRFRRMGRYVVESPDGEDLFLVYRE 30
            G L VF  DLD P  P +     P      R R   RY+VESPDGED+F V+++
Sbjct: 220 SGALMVF--DLDAPGSPMVTCVAGPDSEMSKRGRYKQRYLVESPDGEDVFQVWKD 272


>ref|XP_010905854.1| PREDICTED: putative F-box protein At4g22660 [Elaeis guineensis]
          Length = 415

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 48/118 (40%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
 Frame = -1

Query: 356 LSPSLDTVVVVHRGLVGTESEHLAFSRIGGGSSWTALRSP-DHCFEDVIFHKGRLHAVNC 180
           L PS   V V+H      E   L+F+   G  SWTAL+ P    F D+IF KG LHAV  
Sbjct: 169 LDPSSAAVAVIHG-----EFNDLSFAH-AGDESWTALQPPLPQIFCDIIFRKGLLHAVAI 222

Query: 179 WGRLSVFDEDLDNPSDPPMRS---RNEPLRFRRMG-----RYVVESPDGEDLFLVYRE 30
            G L VF  DLD P  P + +   R    ++ + G     +Y+V SPDG+DLF V+R+
Sbjct: 223 SGALVVF--DLDAPGSPVVVTCVERPHSQKWEQRGCCFNQKYLVGSPDGKDLFQVWRD 278


>ref|XP_010909846.1| PREDICTED: putative F-box protein At4g22660 [Elaeis guineensis]
          Length = 386

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
 Frame = -1

Query: 356 LSPSLDTVVVVHRGLVGTESEHLAFSRIGGGSSWTALRSP-DHCFEDVIFHKGRLHAVNC 180
           L  S   V V+H      E  +L+F+   G  SWTAL+ P    F D+IF KG LHA+  
Sbjct: 194 LDHSSAAVAVIHG-----EFNNLSFAH-AGDESWTALQPPVPRIFWDIIFRKGLLHAMAI 247

Query: 179 WGRLSVFDEDLDNPSDPPMRS---RNEPLRFRRMG-----RYVVESPDGEDLFLVYRE 30
            G L VF  DLD P  P + +   R    ++ + G     +Y+VESPDG+DLF V+R+
Sbjct: 248 SGALVVF--DLDAPGSPVVVTCVERPHSQKWEQRGCCFNQKYLVESPDGKDLFQVWRD 303


>ref|XP_010940778.1| PREDICTED: F-box protein SKIP23-like [Elaeis guineensis]
          Length = 412

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
 Frame = -1

Query: 356 LSPSLDTVVVVHRGLVGTESEHLAFSRIGGGSSWTALRSP-DHCFEDVIFHKGRLHAVNC 180
           L PS   V V+H      E   L+F+   G  SWTAL+ P    F D+IF KG LHAV  
Sbjct: 166 LDPSSAAVAVIHG-----EFNDLSFAH-AGDESWTALQPPLPQIFCDIIFRKGLLHAVAI 219

Query: 179 WGRLSVFDEDLDNPSDPPMRS---RNEPLRFRRMG-----RYVVESPDGEDLFLVYRE 30
            G L VF  DLD P  P + +   R    ++ + G     +Y+V SPDG DLF V+R+
Sbjct: 220 SGALVVF--DLDAPGSPVVVTCVERPHSQKWEQRGCCFNQKYLVGSPDGMDLFQVWRD 275


>ref|XP_010909847.1| PREDICTED: putative F-box protein At4g22660 [Elaeis guineensis]
          Length = 381

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 47/119 (39%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
 Frame = -1

Query: 356 LSPSLDTVVVVHRGLVGTESEHLAFSRIGGGSSWTALRSP-DHCFEDVIFHKGRLHAVNC 180
           L PS   V V+H      E   L+F+   G  SWT L+ P    F D+IF KG LHAV  
Sbjct: 169 LDPSSAAVAVIHG-----EFNDLSFAH-AGDESWTTLQPPLPRLFWDIIFRKGLLHAVAI 222

Query: 179 WGRLSVFDED----------LDNPSDPPMRSRNEPLRFRRMGRYVVESPDGEDLFLVYR 33
              L VFD D          ++ P    ++ R     F R  RY+VESPDG+DLF V+R
Sbjct: 223 TRELVVFDLDAPGSLVVGTWVERPHSQKLKQRG--CCFNR--RYLVESPDGKDLFQVWR 277


>ref|XP_010940779.1| PREDICTED: LOW QUALITY PROTEIN: putative F-box protein At5g60060
           [Elaeis guineensis]
          Length = 252

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
 Frame = -1

Query: 338 TVVVVHRGLVGTESEHLAFSRIGGGSSWTALRSPD-HCFEDVIFHKGRLHAVNCWGRLSV 162
           TVVV++       S  LA++   G  SWT L+ P    F D+IF KG LHA+   G L V
Sbjct: 21  TVVVIYGQF---NSLALAYA---GDESWTQLQPPHPRTFMDIIFRKGLLHAMEYTGELMV 74

Query: 161 FDEDLDNPSDPPMRSRNEPLRFRRMGRY----VVESPDGEDLFLVYREIDVADYD 9
           F  DLD P  P +     P    R+G Y    +V+SPDG+ +F V+R+ D    D
Sbjct: 75  F--DLDTPGSPMVTWVAGP--DSRLGCYNQKCLVKSPDGKGMFQVWRDSDWVPVD 125


Top