BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00008905
         (2159 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009386374.1| PREDICTED: transcription initiation factor I...   464   e-152
ref|XP_009386377.1| PREDICTED: transcription initiation factor I...   464   e-152
ref|XP_010928148.1| PREDICTED: transcription initiation factor I...   499   e-148
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   431   e-144
ref|XP_009383582.1| PREDICTED: transcription initiation factor I...   476   e-141
gb|KDO78433.1| hypothetical protein CISIN_1g008099mg [Citrus sin...   465   e-138
ref|XP_006467340.1| PREDICTED: transcription initiation factor I...   465   e-138
gb|KDO78436.1| hypothetical protein CISIN_1g008099mg [Citrus sin...   465   e-138
gb|KDO78437.1| hypothetical protein CISIN_1g008099mg [Citrus sin...   465   e-138
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr...   464   e-137
ref|XP_012069319.1| PREDICTED: transcription initiation factor I...   459   e-135
ref|XP_002262798.3| PREDICTED: transcription initiation factor I...   457   e-135
gb|AAX95773.1| putative transcription initiation factor [Oryza s...   444   e-132
ref|XP_012449917.1| PREDICTED: transcription initiation factor I...   451   e-132
gb|KHG13582.1| Transcription initiation factor IIF subunit alpha...   451   e-132
gb|AAN04997.1| putative transcription initiation factor [Oryza s...   444   e-132
gb|EAY77905.1| hypothetical protein OsI_32946 [Oryza sativa Indi...   444   e-132
ref|NP_001064266.1| Os10g0188100 [Oryza sativa Japonica Group] g...   444   e-132
gb|KQK89381.1| hypothetical protein SETIT_034500mg [Setaria ital...   441   e-131
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   453   e-130

>ref|XP_009386374.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 542

 Score =  464 bits (1193), Expect(2) = e-152
 Identities = 238/359 (66%), Positives = 269/359 (74%), Gaps = 3/359 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK  C+GCGS SDLYGSNCKH TLC SCGK MA NR RC++CG  ITKLIREYNV
Sbjct: 2    SFDLVLKPCCDGCGSTSDLYGSNCKHTTLCLSCGKTMAANRGRCHLCGAFITKLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            RASA+ DK+++IGRFVTGLPPFSKK  +EN W+LHK+GLQGRQLTD LREKYKNKPW+LE
Sbjct: 62   RASANMDKAFYIGRFVTGLPPFSKKI-SENRWSLHKEGLQGRQLTDNLREKYKNKPWILE 120

Query: 1751 DETGQHQFQGQLEGAQS--ATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEK 1578
            DETGQHQ+QGQ+EG+QS  ATYYLL+M GKEF+A PA SWYNF+K+AQYKQLTLEEAEEK
Sbjct: 121  DETGQHQYQGQIEGSQSTTATYYLLMMQGKEFLAFPAGSWYNFSKIAQYKQLTLEEAEEK 180

Query: 1577 MNKRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEGN-RSKKVKSEDTGDHSDK 1401
            MNKR+ NATGYERWMMKAATNG A FGE+K  E ++   A+G+ R KK KS D G+HSDK
Sbjct: 181  MNKRRHNATGYERWMMKAATNGPAAFGEIKN-EDVTKAEADGSVRLKKGKSNDDGNHSDK 239

Query: 1400 GEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 1221
            GEED DEE ARK+RLGLN                           DWEHEE FTDDDEAV
Sbjct: 240  GEEDDDEEGARKNRLGLNKKAIDDDEEGAKGGDFDLDDEDIEKGDDWEHEETFTDDDEAV 299

Query: 1220 GNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            GNDPEEREDLAPEIPAPPEIKQ                         +AAG+NESD ++
Sbjct: 300  GNDPEEREDLAPEIPAPPEIKQ-DDEDEDEEDGGLSKSGRELKKLLGRAAGLNESDGDE 357



 Score =  107 bits (266), Expect(2) = e-152
 Identities = 68/169 (40%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
 Frame = -3

Query: 1035 EDETAMSPVLAPKQKDG----PKDEPADNSPSKTTPAGSARXXXXXXXXXXXXXXXXXXX 868
            +DE  MSPVLAPKQKD     P +     +   +T A S+                    
Sbjct: 373  DDEIGMSPVLAPKQKDAPKDEPTENTTSKASPPSTSARSSPVTSKSSKSKRKAGSDDAKI 432

Query: 867  XXTNXXXXXXXXXXXXXXXXSTGPXXXXXXXXXXXXXXXXXXXXXXGPVTEEEIRSVLLA 688
                                 T                         PVTE+EIR+VLL+
Sbjct: 433  SNGLPAKKVKADNSNAKAEPPTSSKRNVPPKSLHATTSKLGSMSSTAPVTEDEIRTVLLS 492

Query: 687  TAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVLRE 541
              P+TTQDLVA FK R+KSQEDKKAFADILRRISKIQK NGH+Y+VLRE
Sbjct: 493  ATPLTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKANGHNYIVLRE 541


>ref|XP_009386377.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 533

 Score =  464 bits (1193), Expect(2) = e-152
 Identities = 238/359 (66%), Positives = 269/359 (74%), Gaps = 3/359 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK  C+GCGS SDLYGSNCKH TLC SCGK MA NR RC++CG  ITKLIREYNV
Sbjct: 2    SFDLVLKPCCDGCGSTSDLYGSNCKHTTLCLSCGKTMAANRGRCHLCGAFITKLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            RASA+ DK+++IGRFVTGLPPFSKK  +EN W+LHK+GLQGRQLTD LREKYKNKPW+LE
Sbjct: 62   RASANMDKAFYIGRFVTGLPPFSKKI-SENRWSLHKEGLQGRQLTDNLREKYKNKPWILE 120

Query: 1751 DETGQHQFQGQLEGAQS--ATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEK 1578
            DETGQHQ+QGQ+EG+QS  ATYYLL+M GKEF+A PA SWYNF+K+AQYKQLTLEEAEEK
Sbjct: 121  DETGQHQYQGQIEGSQSTTATYYLLMMQGKEFLAFPAGSWYNFSKIAQYKQLTLEEAEEK 180

Query: 1577 MNKRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEGN-RSKKVKSEDTGDHSDK 1401
            MNKR+ NATGYERWMMKAATNG A FGE+K  E ++   A+G+ R KK KS D G+HSDK
Sbjct: 181  MNKRRHNATGYERWMMKAATNGPAAFGEIKN-EDVTKAEADGSVRLKKGKSNDDGNHSDK 239

Query: 1400 GEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 1221
            GEED DEE ARK+RLGLN                           DWEHEE FTDDDEAV
Sbjct: 240  GEEDDDEEGARKNRLGLNKKAIDDDEEGAKGGDFDLDDEDIEKGDDWEHEETFTDDDEAV 299

Query: 1220 GNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            GNDPEEREDLAPEIPAPPEIKQ                         +AAG+NESD ++
Sbjct: 300  GNDPEEREDLAPEIPAPPEIKQ-DDEDEDEEDGGLSKSGRELKKLLGRAAGLNESDGDE 357



 Score =  107 bits (266), Expect(2) = e-152
 Identities = 68/169 (40%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
 Frame = -3

Query: 1035 EDETAMSPVLAPKQKDG----PKDEPADNSPSKTTPAGSARXXXXXXXXXXXXXXXXXXX 868
            +DE  MSPVLAPKQKD     P +     +   +T A S+                    
Sbjct: 364  DDEIGMSPVLAPKQKDAPKDEPTENTTSKASPPSTSARSSPVTSKSSKSKRKAGSDDAKI 423

Query: 867  XXTNXXXXXXXXXXXXXXXXSTGPXXXXXXXXXXXXXXXXXXXXXXGPVTEEEIRSVLLA 688
                                 T                         PVTE+EIR+VLL+
Sbjct: 424  SNGLPAKKVKADNSNAKAEPPTSSKRNVPPKSLHATTSKLGSMSSTAPVTEDEIRTVLLS 483

Query: 687  TAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVLRE 541
              P+TTQDLVA FK R+KSQEDKKAFADILRRISKIQK NGH+Y+VLRE
Sbjct: 484  ATPLTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKANGHNYIVLRE 532


>ref|XP_010928148.1| PREDICTED: transcription initiation factor IIF subunit alpha [Elaeis
            guineensis]
          Length = 537

 Score =  499 bits (1285), Expect(2) = e-148
 Identities = 250/359 (69%), Positives = 280/359 (77%), Gaps = 3/359 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK +CEGCGS SDLYGSNCKH TLC SCGK MAENR RC +CG  ITKLIREYNV
Sbjct: 2    SFDLVLKPSCEGCGSTSDLYGSNCKHTTLCRSCGKTMAENRGRCRMCGAFITKLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            RASA+TDK+++IGRFVTGLPPFSKKK+AEN+W+L+K+GLQGRQLTD LREK+K+KPW+LE
Sbjct: 62   RASANTDKAFYIGRFVTGLPPFSKKKNAENKWSLYKEGLQGRQLTDSLREKFKSKPWILE 121

Query: 1751 DETGQHQFQGQLEGAQS--ATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEK 1578
            DETGQHQ+QGQ+EG+QS  ATYYLL++HGKEF+AIPA SWYNF K+AQYKQLTLEEAEEK
Sbjct: 122  DETGQHQYQGQVEGSQSTTATYYLLMLHGKEFIAIPAGSWYNFTKIAQYKQLTLEEAEEK 181

Query: 1577 MNKRKSNATGYERWMMKAATNGAAVFGE-MKKLESMSDGGAEGNRSKKVKSEDTGDHSDK 1401
            MNKRK NATGYERWMMKAATNGAA FGE +KK E  S GGA+G+R+KK KS D GDHSDK
Sbjct: 182  MNKRKHNATGYERWMMKAATNGAAAFGELLKKSEGASSGGADGSRAKKGKSNDEGDHSDK 241

Query: 1400 GEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 1221
            GEED +EEEARK+RLGL                            DWEHEE FTDDDEAV
Sbjct: 242  GEEDEEEEEARKNRLGLTKQGVDDEEEGGKGGDIDLDDDDIEKGDDWEHEETFTDDDEAV 301

Query: 1220 GNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            GNDPEEREDLAPEIPAPPEIKQ                         +AAG+NESDAED
Sbjct: 302  GNDPEEREDLAPEIPAPPEIKQ-DDEDENEEDGGLSKSGKELKKLLGRAAGLNESDAED 359



 Score = 58.2 bits (139), Expect(2) = e-148
 Identities = 29/38 (76%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = -3

Query: 1035 EDETAMSPVLAPKQKDGPKDEPADNSPSK-TTPAGSAR 925
            EDE  MSPVLAPKQKD PKDEP D+SPSK   P GSAR
Sbjct: 366  EDEVGMSPVLAPKQKDTPKDEPTDSSPSKPVPPPGSAR 403



 Score =  108 bits (270), Expect = 2e-20
 Identities = 54/62 (87%), Positives = 58/62 (93%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVL 547
           PVTEEEIR+VLL+ APVTTQDLVA FK R+KSQEDK AFADILRRISKIQKTNGH+YVVL
Sbjct: 475 PVTEEEIRTVLLSVAPVTTQDLVARFKARLKSQEDKSAFADILRRISKIQKTNGHNYVVL 534

Query: 546 RE 541
           RE
Sbjct: 535 RE 536


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
            gi|550335193|gb|ERP58675.1| hypothetical protein
            POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  431 bits (1107), Expect(2) = e-144
 Identities = 223/361 (61%), Positives = 252/361 (69%), Gaps = 5/361 (1%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL L+ +C GCGS +DLYGSNCKH TLC +CGK MAENR +C  CG  +T+LIREYNV
Sbjct: 2    SFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            RAS S++K+YFIGRFVTGLP FSKKK+AEN+W+L K+G+ GRQ+TD LREK+KNKPWLLE
Sbjct: 62   RASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLLE 121

Query: 1751 DETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSW--YNFNKVAQYKQLTLEEAEEK 1578
            DETGQ Q+QG LEG+QSATYYLL+M GKEFVAIPA SW  YNFNKVA YKQLTLEEAEEK
Sbjct: 122  DETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEEK 181

Query: 1577 MNKRKSNATGYERWMMKAATNGAAVFGEMKKLESMS--DGGAEGNRSKKVKSEDTGDHSD 1404
            M  R+  A GYERWMMKAA NGAA FGE++K +       G  G R K    +D G+ SD
Sbjct: 182  MKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVSD 241

Query: 1403 KGEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 1224
            KGEED +EE  RKSRLGLN                           DWEHEEIFTDDDEA
Sbjct: 242  KGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEA 301

Query: 1223 VGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAA-GMNESDAE 1047
            V  DPEEREDLAPE+PAPPEIKQ                           A G+NESDAE
Sbjct: 302  VAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDAE 361

Query: 1046 D 1044
            D
Sbjct: 362  D 362



 Score =  111 bits (277), Expect(2) = e-144
 Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
 Frame = -3

Query: 1038 MEDETAMSPVLAPKQKDG-PKDEPADNSPSK-TTPAGSARXXXXXXXXXXXXXXXXXXXX 865
            M+D+  +SPVLAPKQKD  PK+EPADNSP+K T P  +                      
Sbjct: 369  MDDD--ISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNADDAK 426

Query: 864  XTNXXXXXXXXXXXXXXXXSTGPXXXXXXXXXXXXXXXXXXXXXXGPVTEEEIRSVLLAT 685
             +N                S                         GPVTEEEIR+VLL  
Sbjct: 427  TSNGAPVKKEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQN 486

Query: 684  APVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVLREMK 535
             PVTTQDLVA FK R+++ EDKKAFADILRRISKIQKT+G ++VVLR+ +
Sbjct: 487  GPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRDKR 536


>ref|XP_009383582.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Musa acuminata subsp. malaccensis]
          Length = 533

 Score =  476 bits (1224), Expect(2) = e-141
 Identities = 241/359 (67%), Positives = 273/359 (76%), Gaps = 3/359 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK  C+GCGS SDLYGSNCKH TLC SCGK MA NR RC++CG  ITKLIREYNV
Sbjct: 2    SFDLVLKPCCDGCGSTSDLYGSNCKHTTLCLSCGKTMATNRGRCHLCGAFITKLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            RASA+ DK+++IGRFVTGLPPFSKK  +EN W+LHK+GLQGRQLTD L+EKYKNKPW+LE
Sbjct: 62   RASANIDKAFYIGRFVTGLPPFSKKS-SENRWSLHKEGLQGRQLTDTLKEKYKNKPWILE 120

Query: 1751 DETGQHQFQGQLEGAQS--ATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEK 1578
            DETGQHQ+QGQ+EG+QS  ATYYLL+MHGKEF+A PA SWYNF+K+AQYKQLTLEEAEEK
Sbjct: 121  DETGQHQYQGQIEGSQSTTATYYLLMMHGKEFLAFPAGSWYNFSKIAQYKQLTLEEAEEK 180

Query: 1577 MNKRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEG-NRSKKVKSEDTGDHSDK 1401
            MNKR+ NATGYERWMMKAATNGAA FGE+KK E  S G A+G +R KK K+ D G+HSDK
Sbjct: 181  MNKRRHNATGYERWMMKAATNGAAAFGEVKKNEEASKGEADGSSRLKKGKNSDDGEHSDK 240

Query: 1400 GEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 1221
            GEE+ DEEEARK+RLGL+                           DWEHEE FTDDDEAV
Sbjct: 241  GEENEDEEEARKNRLGLSKKGVDDDEEGAKGGEFDLDDDDIEKGDDWEHEETFTDDDEAV 300

Query: 1220 GNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            GNDPEEREDLAPEIPAPPEIKQ                         +AAG+NESD E+
Sbjct: 301  GNDPEEREDLAPEIPAPPEIKQ-DDEEEDEEDGGLSKSGKELKKLLGRAAGLNESDGEE 358



 Score = 57.8 bits (138), Expect(2) = e-141
 Identities = 27/38 (71%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
 Frame = -3

Query: 1035 EDETAMSPVLAPKQKDGPKDEPADNSPSKTT-PAGSAR 925
            +DE  MSPVLAPKQKD PKDEP +N+PSK   P+GSAR
Sbjct: 365  DDEIGMSPVLAPKQKDAPKDEPTENTPSKAAPPSGSAR 402



 Score =  101 bits (251), Expect = 3e-18
 Identities = 48/62 (77%), Positives = 56/62 (90%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVL 547
           PVTE+EIR+VLL+  P+TTQDLVA FK R+KSQEDK AFADILRRISKIQK NGH+Y+VL
Sbjct: 471 PVTEDEIRTVLLSATPLTTQDLVAKFKARLKSQEDKNAFADILRRISKIQKANGHNYIVL 530

Query: 546 RE 541
           R+
Sbjct: 531 RD 532


>gb|KDO78433.1| hypothetical protein CISIN_1g008099mg [Citrus sinensis]
          Length = 577

 Score =  465 bits (1197), Expect(2) = e-138
 Identities = 234/357 (65%), Positives = 260/357 (72%), Gaps = 1/357 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK  C GCGS +DLYGSNCKH TLC +CGK MAEN+A+C  CG  +T+LIREYNV
Sbjct: 2    SFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            R S S+DK+YFIGRFV+GLP FSKKK+AEN+WTLHKDGLQGRQ+TD LREKYKNKPW+LE
Sbjct: 62   RPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWMLE 121

Query: 1751 DETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMN 1572
            DETGQ Q+QG LEG+QSATYYLLVMH KEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM 
Sbjct: 122  DETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181

Query: 1571 KRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEG-NRSKKVKSEDTGDHSDKGE 1395
             R+  A GYERWMMKAA NGAA FGE++K +     G  G  RSKK   ED G+ SD+GE
Sbjct: 182  NRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRGE 241

Query: 1394 EDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 1215
            ED DEE  RK+RLGLN                           DWEHEEIFTDDDEAVGN
Sbjct: 242  EDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVGN 301

Query: 1214 DPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            DPEEREDLAPE+PAPPEIKQ                         +A G+NESDAED
Sbjct: 302  DPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358



 Score = 55.8 bits (133), Expect(2) = e-138
 Identities = 26/39 (66%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = -3

Query: 1038 MEDETAMSPVLAPKQKDGP-KDEPADNSPSKTTPAGSAR 925
            MEDE   SP+LAPK KD P K+EPADNSP+K  P+GS R
Sbjct: 366  MEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGR 404


>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Citrus sinensis]
            gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Citrus sinensis] gi|641859741|gb|KDO78431.1|
            hypothetical protein CISIN_1g008099mg [Citrus sinensis]
            gi|641859742|gb|KDO78432.1| hypothetical protein
            CISIN_1g008099mg [Citrus sinensis]
          Length = 538

 Score =  465 bits (1197), Expect(2) = e-138
 Identities = 234/357 (65%), Positives = 260/357 (72%), Gaps = 1/357 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK  C GCGS +DLYGSNCKH TLC +CGK MAEN+A+C  CG  +T+LIREYNV
Sbjct: 2    SFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            R S S+DK+YFIGRFV+GLP FSKKK+AEN+WTLHKDGLQGRQ+TD LREKYKNKPW+LE
Sbjct: 62   RPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWMLE 121

Query: 1751 DETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMN 1572
            DETGQ Q+QG LEG+QSATYYLLVMH KEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM 
Sbjct: 122  DETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181

Query: 1571 KRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEG-NRSKKVKSEDTGDHSDKGE 1395
             R+  A GYERWMMKAA NGAA FGE++K +     G  G  RSKK   ED G+ SD+GE
Sbjct: 182  NRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRGE 241

Query: 1394 EDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 1215
            ED DEE  RK+RLGLN                           DWEHEEIFTDDDEAVGN
Sbjct: 242  EDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVGN 301

Query: 1214 DPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            DPEEREDLAPE+PAPPEIKQ                         +A G+NESDAED
Sbjct: 302  DPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358



 Score = 55.8 bits (133), Expect(2) = e-138
 Identities = 26/39 (66%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = -3

Query: 1038 MEDETAMSPVLAPKQKDGP-KDEPADNSPSKTTPAGSAR 925
            MEDE   SP+LAPK KD P K+EPADNSP+K  P+GS R
Sbjct: 366  MEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGR 404



 Score = 90.9 bits (224), Expect = 4e-15
 Identities = 49/63 (77%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHS-YVV 550
           PVT EEIR+VLL  APVTTQDLVA FK R++S ED+ AFADIL+RISKIQKTNG S YVV
Sbjct: 475 PVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVV 534

Query: 549 LRE 541
           LRE
Sbjct: 535 LRE 537


>gb|KDO78436.1| hypothetical protein CISIN_1g008099mg [Citrus sinensis]
          Length = 521

 Score =  465 bits (1197), Expect(2) = e-138
 Identities = 234/357 (65%), Positives = 260/357 (72%), Gaps = 1/357 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK  C GCGS +DLYGSNCKH TLC +CGK MAEN+A+C  CG  +T+LIREYNV
Sbjct: 2    SFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            R S S+DK+YFIGRFV+GLP FSKKK+AEN+WTLHKDGLQGRQ+TD LREKYKNKPW+LE
Sbjct: 62   RPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWMLE 121

Query: 1751 DETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMN 1572
            DETGQ Q+QG LEG+QSATYYLLVMH KEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM 
Sbjct: 122  DETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181

Query: 1571 KRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEG-NRSKKVKSEDTGDHSDKGE 1395
             R+  A GYERWMMKAA NGAA FGE++K +     G  G  RSKK   ED G+ SD+GE
Sbjct: 182  NRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRGE 241

Query: 1394 EDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 1215
            ED DEE  RK+RLGLN                           DWEHEEIFTDDDEAVGN
Sbjct: 242  EDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVGN 301

Query: 1214 DPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            DPEEREDLAPE+PAPPEIKQ                         +A G+NESDAED
Sbjct: 302  DPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358



 Score = 55.8 bits (133), Expect(2) = e-138
 Identities = 26/39 (66%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = -3

Query: 1038 MEDETAMSPVLAPKQKDGP-KDEPADNSPSKTTPAGSAR 925
            MEDE   SP+LAPK KD P K+EPADNSP+K  P+GS R
Sbjct: 366  MEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGR 404


>gb|KDO78437.1| hypothetical protein CISIN_1g008099mg [Citrus sinensis]
          Length = 453

 Score =  465 bits (1197), Expect(2) = e-138
 Identities = 234/357 (65%), Positives = 260/357 (72%), Gaps = 1/357 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK  C GCGS +DLYGSNCKH TLC +CGK MAEN+A+C  CG  +T+LIREYNV
Sbjct: 2    SFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            R S S+DK+YFIGRFV+GLP FSKKK+AEN+WTLHKDGLQGRQ+TD LREKYKNKPW+LE
Sbjct: 62   RPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWMLE 121

Query: 1751 DETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMN 1572
            DETGQ Q+QG LEG+QSATYYLLVMH KEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM 
Sbjct: 122  DETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181

Query: 1571 KRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEG-NRSKKVKSEDTGDHSDKGE 1395
             R+  A GYERWMMKAA NGAA FGE++K +     G  G  RSKK   ED G+ SD+GE
Sbjct: 182  NRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRGE 241

Query: 1394 EDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 1215
            ED DEE  RK+RLGLN                           DWEHEEIFTDDDEAVGN
Sbjct: 242  EDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVGN 301

Query: 1214 DPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            DPEEREDLAPE+PAPPEIKQ                         +A G+NESDAED
Sbjct: 302  DPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358



 Score = 55.8 bits (133), Expect(2) = e-138
 Identities = 26/39 (66%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = -3

Query: 1038 MEDETAMSPVLAPKQKDGP-KDEPADNSPSKTTPAGSAR 925
            MEDE   SP+LAPK KD P K+EPADNSP+K  P+GS R
Sbjct: 366  MEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGR 404


>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
            gi|567915083|ref|XP_006449855.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552465|gb|ESR63094.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552466|gb|ESR63095.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
          Length = 538

 Score =  464 bits (1194), Expect(2) = e-137
 Identities = 234/357 (65%), Positives = 259/357 (72%), Gaps = 1/357 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK  C GCGS  DLYGSNCKH TLC +CGK MAEN+A+C  CG  +T+LIREYNV
Sbjct: 2    SFDLLLKPQCSGCGSQVDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            R S S+DK+YFIGRFV+GLP FSKKK+AEN+WTLHKDGLQGRQ+TD LREKYKNKPW+LE
Sbjct: 62   RPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWMLE 121

Query: 1751 DETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMN 1572
            DETGQ Q+QG LEG+QSATYYLLVMH KEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM 
Sbjct: 122  DETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181

Query: 1571 KRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEG-NRSKKVKSEDTGDHSDKGE 1395
             R+  A GYERWMMKAA NGAA FGE++K +     G  G  RSKK   ED G+ SD+GE
Sbjct: 182  NRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRGE 241

Query: 1394 EDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 1215
            ED DEE  RK+RLGLN                           DWEHEEIFTDDDEAVGN
Sbjct: 242  EDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVGN 301

Query: 1214 DPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            DPEEREDLAPE+PAPPEIKQ                         +A G+NESDAED
Sbjct: 302  DPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358



 Score = 55.8 bits (133), Expect(2) = e-137
 Identities = 26/39 (66%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = -3

Query: 1038 MEDETAMSPVLAPKQKDGP-KDEPADNSPSKTTPAGSAR 925
            MEDE   SP+LAPK KD P K+EPADNSP+K  P+GS R
Sbjct: 366  MEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGR 404



 Score = 90.9 bits (224), Expect = 4e-15
 Identities = 49/63 (77%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHS-YVV 550
           PVT EEIR+VLL  APVTTQDLVA FK R++S ED+ AFADIL+RISKIQKTNG S YVV
Sbjct: 475 PVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVV 534

Query: 549 LRE 541
           LRE
Sbjct: 535 LRE 537


>ref|XP_012069319.1| PREDICTED: transcription initiation factor IIF subunit alpha
            [Jatropha curcas] gi|802578042|ref|XP_012069320.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Jatropha curcas] gi|802578044|ref|XP_012069321.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Jatropha curcas] gi|802578046|ref|XP_012069322.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Jatropha curcas] gi|643733570|gb|KDP40450.1|
            hypothetical protein JCGZ_03950 [Jatropha curcas]
          Length = 533

 Score =  459 bits (1180), Expect(2) = e-135
 Identities = 229/359 (63%), Positives = 261/359 (72%), Gaps = 3/359 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK +C GCGS  +LYGSNCKH TLC +CGK MAENR +C  CG  +T+LIREYNV
Sbjct: 2    SFDLMLKPSCSGCGSTQELYGSNCKHMTLCLTCGKTMAENRGKCYDCGATVTRLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            RAS+S+DK+YFIGRFVTGLP FSKKK AEN+W+LHKDGLQGRQLTD LREKY+NKPW+LE
Sbjct: 62   RASSSSDKNYFIGRFVTGLPSFSKKKSAENKWSLHKDGLQGRQLTDALREKYRNKPWMLE 121

Query: 1751 DETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMN 1572
            DETGQ Q+QG LEG+QSATYYLL++ GKEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM 
Sbjct: 122  DETGQSQYQGHLEGSQSATYYLLILQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181

Query: 1571 KRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDG--GAEGNRSKKVKSEDTGDHSDKG 1398
             R+  A GY+RWMMKAA NGAA FGE++K +    G  G +G R K    E+ G+ SD+ 
Sbjct: 182  NRRKTADGYQRWMMKAANNGAAAFGEVEKFDDKESGTAGGKGGRKKPAGDEEEGNVSDRA 241

Query: 1397 EEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 1218
            EED +EE ARK+RLGLN                           DWEHEEIFTDDDEAVG
Sbjct: 242  EEDEEEEAARKNRLGLNKRSGDDDEEGLRGGDHDMDDDDSEKGDDWEHEEIFTDDDEAVG 301

Query: 1217 NDPEEREDLAPEIPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            NDPEEREDLAPE+PAPPEIKQ                          KAAG+N+SDAED
Sbjct: 302  NDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKAAGLNDSDAED 360



 Score = 52.8 bits (125), Expect(2) = e-135
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -3

Query: 1029 ETAMSPVLAPKQKDGPKDEPADNSPSKTTPAGSAR 925
            E  +SPVLAPKQKD PK+EP DNSP+K  P+ SA+
Sbjct: 368  EEDVSPVLAPKQKDAPKEEPVDNSPAKPMPSSSAK 402



 Score = 97.8 bits (242), Expect = 4e-17
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVL 547
           PVTEEEIR+VLL   PVTTQDLVA FK R+K  EDKKAFA+ILRRISKIQKT+G +YVVL
Sbjct: 471 PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKIQKTSGSNYVVL 530

Query: 546 RE 541
           RE
Sbjct: 531 RE 532


>ref|XP_002262798.3| PREDICTED: transcription initiation factor IIF subunit alpha [Vitis
            vinifera] gi|297741818|emb|CBI33123.3| unnamed protein
            product [Vitis vinifera]
          Length = 539

 Score =  457 bits (1177), Expect(2) = e-135
 Identities = 229/361 (63%), Positives = 261/361 (72%), Gaps = 5/361 (1%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK +C GCGS +DLYGSNCKH TLC SCGK MAEN  +C  CG P+T+LIREYNV
Sbjct: 2    SFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            R ++S DK+YFIGRFVTGLP FSKKK+A+N+W+LHK+GLQGRQ++D LREKYKNKPWLLE
Sbjct: 62   RTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLE 121

Query: 1751 DETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMN 1572
            DETGQ+Q+ GQLEG+QSATYYLL+M GKEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM 
Sbjct: 122  DETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181

Query: 1571 KRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEGN---RSKKVKSEDTGDHSDK 1401
             R+  A GY+RWMMKAA NG A FGE++KL+    GGA G    R K+   E+ G+ SDK
Sbjct: 182  NRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDK 241

Query: 1400 GEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 1221
             EED +EE  RK+RLGLN                           DWEHEEIFTDDDEAV
Sbjct: 242  AEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAV 301

Query: 1220 GNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXK--AAGMNESDAE 1047
            GNDPEEREDLAPE+PAPPEIKQ                            AAGMN+SDAE
Sbjct: 302  GNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAE 361

Query: 1046 D 1044
            D
Sbjct: 362  D 362



 Score = 53.5 bits (127), Expect(2) = e-135
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = -3

Query: 1035 EDETAMSPVLAPKQKDGPKDEPADNSPSKTTPAGS 931
            EDE  +SPVLAPKQKD PK+EPADNSP K+  A +
Sbjct: 369  EDEIGLSPVLAPKQKDVPKEEPADNSPMKSATASA 403



 Score =  103 bits (256), Expect = 8e-19
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVL 547
           PVTE+EIR+VLL  APVTTQDLVA FK R+KSQEDKKAFADILRRISKIQKTNG +YVVL
Sbjct: 477 PVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVL 536

Query: 546 RE 541
           R+
Sbjct: 537 RD 538


>gb|AAX95773.1| putative transcription initiation factor [Oryza sativa Japonica
            Group] gi|78708004|gb|ABB46979.1| mutant TFIIF-alpha,
            putative, expressed [Oryza sativa Japonica Group]
          Length = 531

 Score =  444 bits (1141), Expect(2) = e-132
 Identities = 230/361 (63%), Positives = 265/361 (73%), Gaps = 3/361 (0%)
 Frame = -1

Query: 2117 MSSFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREY 1938
            M S DL+LKAACEGCGSPSDLYG++CKH TLC SCGK MA + ARC VC  PIT LIREY
Sbjct: 1    MGSADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREY 60

Query: 1937 NVRASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWL 1758
            NVRA+A+TDKS+ IGRFVTGLPPFSKKK AEN+W+LHK+GLQGRQ+ + +REKY  KPW+
Sbjct: 61   NVRANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWI 120

Query: 1757 LEDETGQHQFQGQLEGAQS--ATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAE 1584
            LEDETGQ+Q+QGQ+EG+QS  ATYYLL+MHGKEF A PA SWYNF+K+AQYKQLTLEEAE
Sbjct: 121  LEDETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAE 180

Query: 1583 EKMNKRKSNATGYERWMMKAATNGAAVFG-EMKKLESMSDGGAEGNRSKKVKSEDTGDHS 1407
            EKMNKRK++ATGYERWMMKAATNG A FG ++KKLE  +    E  R KK K+ + G++S
Sbjct: 181  EKMNKRKTSATGYERWMMKAATNGPAAFGSDVKKLEPTNGTEKENARPKKGKNNEEGNNS 240

Query: 1406 DKGEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 1227
            DKGEED +EE ARK+RL LN                           DWEHEE FTDDDE
Sbjct: 241  DKGEEDEEEEAARKNRLALN-KKSMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDE 299

Query: 1226 AVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAE 1047
            AV  DPEER DLAPEIPAPPEIKQ                         KAAG+NESDA+
Sbjct: 300  AVDIDPEERADLAPEIPAPPEIKQ--DDEENEEEGGLSKSGKELKKLLGKAAGLNESDAD 357

Query: 1046 D 1044
            +
Sbjct: 358  E 358



 Score = 60.1 bits (144), Expect(2) = e-132
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = -3

Query: 1035 EDETAMSPVLAPKQKDGPKDEPADNSPSKTTPAGSAR 925
            +DE   SPVLAPKQKD PKDEP DNSP+K TP+G AR
Sbjct: 363  DDEDESSPVLAPKQKDQPKDEPVDNSPAKPTPSGHAR 399



 Score = 98.2 bits (243), Expect = 3e-17
 Identities = 47/64 (73%), Positives = 57/64 (89%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVL 547
           PVTE+EIR+VLLA APVTTQDLV+ FK R++  EDK AFA+IL++ISKIQKTNGH+YVVL
Sbjct: 467 PVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 526

Query: 546 REMK 535
           R+ K
Sbjct: 527 RDDK 530


>ref|XP_012449917.1| PREDICTED: transcription initiation factor IIF subunit alpha
            [Gossypium raimondii] gi|823234571|ref|XP_012449918.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Gossypium raimondii]
            gi|823234573|ref|XP_012449919.1| PREDICTED: transcription
            initiation factor IIF subunit alpha [Gossypium raimondii]
            gi|763800373|gb|KJB67328.1| hypothetical protein
            B456_010G186300 [Gossypium raimondii]
            gi|763800374|gb|KJB67329.1| hypothetical protein
            B456_010G186300 [Gossypium raimondii]
          Length = 547

 Score =  451 bits (1161), Expect(2) = e-132
 Identities = 228/357 (63%), Positives = 258/357 (72%), Gaps = 1/357 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK +C GCGS  DLYGSNCKH TLC SCGK MAEN+ +C  CG  +T+LIREYNV
Sbjct: 2    SFDLMLKPSCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCFECGAIVTRLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            RAS STDK+YFIGRF+TGLP FSKKK+AEN W+L KDGLQGRQ+TD LREKYKNKPWLLE
Sbjct: 62   RASPSTDKNYFIGRFMTGLPNFSKKKNAENRWSLQKDGLQGRQVTDALREKYKNKPWLLE 121

Query: 1751 DETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMN 1572
            DETGQ Q+QGQLEG+QSATYYLL+M GKEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM 
Sbjct: 122  DETGQAQYQGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181

Query: 1571 KRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEG-NRSKKVKSEDTGDHSDKGE 1395
             R+  A GYERWMMKAA NGAA FGE++K++      A G  R K    E+ G  SD+GE
Sbjct: 182  NRRKTADGYERWMMKAANNGAAAFGEVEKIDEKETAAAGGRGRKKSTGEEEEGHVSDRGE 241

Query: 1394 EDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 1215
            ED +EE ARK+RLGLN                           DWEHEEIFTDDDEAVGN
Sbjct: 242  EDEEEEAARKNRLGLNKKSGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGN 301

Query: 1214 DPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            DPEER DLAPE+PAPPEIK+                         KA+G+N+SDA++
Sbjct: 302  DPEER-DLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKLLGKASGLNDSDADE 357



 Score = 51.6 bits (122), Expect(2) = e-132
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = -3

Query: 1038 MEDETAMSPVLAPKQKDGPKDEPADNSPSKTTPAGSAR 925
            ++D+   +P  APKQKD PK+EPADNSP K  P+ SAR
Sbjct: 364  VDDDMNFNPTPAPKQKDAPKEEPADNSPMKPAPSASAR 401



 Score = 97.8 bits (242), Expect = 4e-17
 Identities = 52/63 (82%), Positives = 56/63 (88%), Gaps = 1/63 (1%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNG-HSYVV 550
           PVTEEEIR+VLL  APVTT DLVA FK R+KS EDKKAFADILRRISKIQKTNG ++YVV
Sbjct: 484 PVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTNGPNNYVV 543

Query: 549 LRE 541
           LRE
Sbjct: 544 LRE 546


>gb|KHG13582.1| Transcription initiation factor IIF subunit alpha -like protein
            [Gossypium arboreum]
          Length = 547

 Score =  451 bits (1161), Expect(2) = e-132
 Identities = 228/357 (63%), Positives = 258/357 (72%), Gaps = 1/357 (0%)
 Frame = -1

Query: 2111 SFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREYNV 1932
            SFDL+LK +C GCGS  DLYGSNCKH TLC SCGK MAEN+ +C  CG  +T+LIREYNV
Sbjct: 2    SFDLMLKPSCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCFECGAIVTRLIREYNV 61

Query: 1931 RASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWLLE 1752
            RAS STDK+YFIGRF+TGLP FSKKK+AEN W+L KDGLQGRQ+TD LREKYKNKPWLLE
Sbjct: 62   RASPSTDKNYFIGRFMTGLPNFSKKKNAENRWSLQKDGLQGRQVTDALREKYKNKPWLLE 121

Query: 1751 DETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMN 1572
            DETGQ Q+QGQLEG+QSATYYLL+M GKEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM 
Sbjct: 122  DETGQAQYQGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181

Query: 1571 KRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEG-NRSKKVKSEDTGDHSDKGE 1395
             R+  A GYERWMMKAA NGAA FGE++K++      A G  R K    E+ G  SD+GE
Sbjct: 182  NRRKTADGYERWMMKAANNGAAAFGEVEKIDEKETAAAGGRGRKKSTGEEEEGHVSDRGE 241

Query: 1394 EDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 1215
            ED +EE ARK+RLGLN                           DWEHEEIFTDDDEAVGN
Sbjct: 242  EDEEEEAARKNRLGLNKKSGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGN 301

Query: 1214 DPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            DPEER DLAPE+PAPPEIK+                         KA+G+N+SDA++
Sbjct: 302  DPEER-DLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKLLGKASGLNDSDADE 357



 Score = 51.6 bits (122), Expect(2) = e-132
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = -3

Query: 1038 MEDETAMSPVLAPKQKDGPKDEPADNSPSKTTPAGSAR 925
            ++D+   +P  APKQKD PK+EPADNSP K  P+ SAR
Sbjct: 364  VDDDMNFNPTPAPKQKDAPKEEPADNSPMKPAPSASAR 401



 Score = 97.8 bits (242), Expect = 4e-17
 Identities = 52/63 (82%), Positives = 56/63 (88%), Gaps = 1/63 (1%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNG-HSYVV 550
           PVTEEEIR+VLL  APVTT DLVA FK R+KS EDKKAFADILRRISKIQKTNG ++YVV
Sbjct: 484 PVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTNGPNNYVV 543

Query: 549 LRE 541
           LRE
Sbjct: 544 LRE 546


>gb|AAN04997.1| putative transcription initiation factor [Oryza sativa Japonica
            Group] gi|31430629|gb|AAP52517.1| mutant TFIIF-alpha,
            putative, expressed [Oryza sativa Japonica Group]
          Length = 532

 Score =  444 bits (1141), Expect(2) = e-132
 Identities = 230/361 (63%), Positives = 265/361 (73%), Gaps = 3/361 (0%)
 Frame = -1

Query: 2117 MSSFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREY 1938
            M S DL+LKAACEGCGSPSDLYG++CKH TLC SCGK MA + ARC VC  PIT LIREY
Sbjct: 1    MGSADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREY 60

Query: 1937 NVRASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWL 1758
            NVRA+A+TDKS+ IGRFVTGLPPFSKKK AEN+W+LHK+GLQGRQ+ + +REKY  KPW+
Sbjct: 61   NVRANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWI 120

Query: 1757 LEDETGQHQFQGQLEGAQS--ATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAE 1584
            LEDETGQ+Q+QGQ+EG+QS  ATYYLL+MHGKEF A PA SWYNF+K+AQYKQLTLEEAE
Sbjct: 121  LEDETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAE 180

Query: 1583 EKMNKRKSNATGYERWMMKAATNGAAVFG-EMKKLESMSDGGAEGNRSKKVKSEDTGDHS 1407
            EKMNKRK++ATGYERWMMKAATNG A FG ++KKLE  +    E  R KK K+ + G++S
Sbjct: 181  EKMNKRKTSATGYERWMMKAATNGPAAFGSDVKKLEPTNGTEKENARPKKGKNNEEGNNS 240

Query: 1406 DKGEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 1227
            DKGEED +EE ARK+RL LN                           DWEHEE FTDDDE
Sbjct: 241  DKGEEDEEEEAARKNRLALN-KKSMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDE 299

Query: 1226 AVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAE 1047
            AV  DPEER DLAPEIPAPPEIKQ                         KAAG+NESDA+
Sbjct: 300  AVDIDPEERADLAPEIPAPPEIKQ--DDEENEEEGGLSKSGKELKKLLGKAAGLNESDAD 357

Query: 1046 D 1044
            +
Sbjct: 358  E 358



 Score = 57.8 bits (138), Expect(2) = e-132
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = -3

Query: 1035 EDETAMSPVLAPKQKDGPKDEPADNSPSKTTPAGSAR 925
            EDE+  SPVLAPKQKD PKDEP DNSP+K TP+G AR
Sbjct: 366  EDES--SPVLAPKQKDQPKDEPVDNSPAKPTPSGHAR 400



 Score = 98.2 bits (243), Expect = 3e-17
 Identities = 47/64 (73%), Positives = 57/64 (89%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVL 547
           PVTE+EIR+VLLA APVTTQDLV+ FK R++  EDK AFA+IL++ISKIQKTNGH+YVVL
Sbjct: 468 PVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 527

Query: 546 REMK 535
           R+ K
Sbjct: 528 RDDK 531


>gb|EAY77905.1| hypothetical protein OsI_32946 [Oryza sativa Indica Group]
          Length = 532

 Score =  444 bits (1141), Expect(2) = e-132
 Identities = 230/361 (63%), Positives = 265/361 (73%), Gaps = 3/361 (0%)
 Frame = -1

Query: 2117 MSSFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREY 1938
            M S DL+LKAACEGCGSPSDLYG++CKH TLC SCGK MA + ARC VC  PIT LIREY
Sbjct: 1    MGSADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREY 60

Query: 1937 NVRASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWL 1758
            NVRA+A+TDKS+ IGRFVTGLPPFSKKK AEN+W+LHK+GLQGRQ+ + +REKY  KPW+
Sbjct: 61   NVRANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWI 120

Query: 1757 LEDETGQHQFQGQLEGAQS--ATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAE 1584
            LEDETGQ+Q+QGQ+EG+QS  ATYYLL+MHGKEF A PA SWYNF+K+AQYKQLTLEEAE
Sbjct: 121  LEDETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAE 180

Query: 1583 EKMNKRKSNATGYERWMMKAATNGAAVFG-EMKKLESMSDGGAEGNRSKKVKSEDTGDHS 1407
            EKMNKRK++ATGYERWMMKAATNG A FG ++KKLE  +    E  R KK K+ + G++S
Sbjct: 181  EKMNKRKTSATGYERWMMKAATNGPAAFGSDIKKLEPTNGTEKENARPKKGKNNEEGNNS 240

Query: 1406 DKGEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 1227
            DKGEED +EE ARK+RL LN                           DWEHEE FTDDDE
Sbjct: 241  DKGEEDEEEEAARKNRLALN-KKSMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDE 299

Query: 1226 AVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAE 1047
            AV  DPEER DLAPEIPAPPEIKQ                         KAAG+NESDA+
Sbjct: 300  AVDIDPEERADLAPEIPAPPEIKQ--DDEENEEEGGLSKSGKELKKLLGKAAGLNESDAD 357

Query: 1046 D 1044
            +
Sbjct: 358  E 358



 Score = 57.8 bits (138), Expect(2) = e-132
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = -3

Query: 1035 EDETAMSPVLAPKQKDGPKDEPADNSPSKTTPAGSAR 925
            EDE+  SPVLAPKQKD PKDEP DNSP+K TP+G AR
Sbjct: 366  EDES--SPVLAPKQKDQPKDEPVDNSPAKPTPSGHAR 400



 Score = 98.2 bits (243), Expect = 3e-17
 Identities = 47/64 (73%), Positives = 57/64 (89%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVL 547
           PVTE+EIR+VLLA APVTTQDLV+ FK R++  EDK AFA+IL++ISKIQKTNGH+YVVL
Sbjct: 468 PVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 527

Query: 546 REMK 535
           R+ K
Sbjct: 528 RDDK 531


>ref|NP_001064266.1| Os10g0188100 [Oryza sativa Japonica Group] gi|62733662|gb|AAX95774.1|
            putative transcription initiation factor [Oryza sativa
            Japonica Group] gi|78708005|gb|ABB46980.1| mutant
            TFIIF-alpha, putative, expressed [Oryza sativa Japonica
            Group] gi|113638875|dbj|BAF26180.1| Os10g0188100 [Oryza
            sativa Japonica Group] gi|215713568|dbj|BAG94705.1|
            unnamed protein product [Oryza sativa Japonica Group]
            gi|215769198|dbj|BAH01427.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|937935253|dbj|BAT10167.1| Os10g0188100 [Oryza sativa
            Japonica Group]
          Length = 529

 Score =  444 bits (1141), Expect(2) = e-132
 Identities = 230/361 (63%), Positives = 265/361 (73%), Gaps = 3/361 (0%)
 Frame = -1

Query: 2117 MSSFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREY 1938
            M S DL+LKAACEGCGSPSDLYG++CKH TLC SCGK MA + ARC VC  PIT LIREY
Sbjct: 1    MGSADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREY 60

Query: 1937 NVRASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWL 1758
            NVRA+A+TDKS+ IGRFVTGLPPFSKKK AEN+W+LHK+GLQGRQ+ + +REKY  KPW+
Sbjct: 61   NVRANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWI 120

Query: 1757 LEDETGQHQFQGQLEGAQS--ATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAE 1584
            LEDETGQ+Q+QGQ+EG+QS  ATYYLL+MHGKEF A PA SWYNF+K+AQYKQLTLEEAE
Sbjct: 121  LEDETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAE 180

Query: 1583 EKMNKRKSNATGYERWMMKAATNGAAVFG-EMKKLESMSDGGAEGNRSKKVKSEDTGDHS 1407
            EKMNKRK++ATGYERWMMKAATNG A FG ++KKLE  +    E  R KK K+ + G++S
Sbjct: 181  EKMNKRKTSATGYERWMMKAATNGPAAFGSDVKKLEPTNGTEKENARPKKGKNNEEGNNS 240

Query: 1406 DKGEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 1227
            DKGEED +EE ARK+RL LN                           DWEHEE FTDDDE
Sbjct: 241  DKGEEDEEEEAARKNRLALN-KKSMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDE 299

Query: 1226 AVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAE 1047
            AV  DPEER DLAPEIPAPPEIKQ                         KAAG+NESDA+
Sbjct: 300  AVDIDPEERADLAPEIPAPPEIKQ--DDEENEEEGGLSKSGKELKKLLGKAAGLNESDAD 357

Query: 1046 D 1044
            +
Sbjct: 358  E 358



 Score = 57.8 bits (138), Expect(2) = e-132
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = -3

Query: 1035 EDETAMSPVLAPKQKDGPKDEPADNSPSKTTPAGSAR 925
            EDE+  SPVLAPKQKD PKDEP DNSP+K TP+G AR
Sbjct: 366  EDES--SPVLAPKQKDQPKDEPVDNSPAKPTPSGHAR 400



 Score = 98.2 bits (243), Expect = 3e-17
 Identities = 47/64 (73%), Positives = 57/64 (89%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVL 547
           PVTE+EIR+VLLA APVTTQDLV+ FK R++  EDK AFA+IL++ISKIQKTNGH+YVVL
Sbjct: 465 PVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 524

Query: 546 REMK 535
           R+ K
Sbjct: 525 RDDK 528


>gb|KQK89381.1| hypothetical protein SETIT_034500mg [Setaria italica]
          Length = 691

 Score =  441 bits (1134), Expect(2) = e-131
 Identities = 225/362 (62%), Positives = 263/362 (72%), Gaps = 3/362 (0%)
 Frame = -1

Query: 2120 AMSSFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIRE 1941
            AM S DL+LK ACEGCG+ SDLYG+ CKH TLC  CGK MA +RARC VC  PIT+LIRE
Sbjct: 161  AMGSADLVLKPACEGCGNTSDLYGTGCKHTTLCSECGKSMARSRARCLVCSSPITRLIRE 220

Query: 1940 YNVRASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPW 1761
            YNVRA+A TDK+Y IGRFVTGLPPFSKKK AEN+W+LHK+GLQGRQ+ + +REKY  KPW
Sbjct: 221  YNVRANAITDKTYSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPW 280

Query: 1760 LLEDETGQHQFQGQLEGAQS--ATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEA 1587
            +LEDETGQ+Q+QGQ+EG+QS  ATYYLL+ HGKEF A PA SWYNF+K+AQYKQLTLEEA
Sbjct: 281  ILEDETGQYQYQGQMEGSQSATATYYLLMRHGKEFNAYPAGSWYNFSKIAQYKQLTLEEA 340

Query: 1586 EEKMNKRKSNATGYERWMMKAATNGAAVFG-EMKKLESMSDGGAEGNRSKKVKSEDTGDH 1410
            EEKMNKRK++ATGYERWMMKAA NG A FG ++KKLE+ + G  E  R KK K+ + G++
Sbjct: 341  EEKMNKRKTSATGYERWMMKAAANGPAAFGSDIKKLEATNSGEKESGRPKKAKNNEEGNN 400

Query: 1409 SDKGEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDD 1230
            SDKGEED +EE ARK+RLGL                            DWEHEE FTDDD
Sbjct: 401  SDKGEEDEEEEAARKNRLGLT-KKGMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDD 459

Query: 1229 EAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDA 1050
            EAV  DPEER DLAPEIPAPPEIKQ                         +AAG+N+SDA
Sbjct: 460  EAVDIDPEERADLAPEIPAPPEIKQ--DDEENEEEGGLSKSGKELKKLLGRAAGLNDSDA 517

Query: 1049 ED 1044
            ++
Sbjct: 518  DE 519



 Score = 57.8 bits (138), Expect(2) = e-131
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = -3

Query: 1035 EDETAMSPVLAPKQKDGPKDEPADNSPSKTTPAGSAR 925
            EDE   SPVLAPKQKD  KDEP DNSP+K TP+G AR
Sbjct: 524  EDEDESSPVLAPKQKDQVKDEPVDNSPAKQTPSGHAR 560



 Score = 99.4 bits (246), Expect = 1e-17
 Identities = 48/64 (75%), Positives = 57/64 (89%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVL 547
           PVTE+EIRSVLLA APVTTQDLV+ FK R++  EDK AFA+IL++ISKIQKTNGH+YVVL
Sbjct: 627 PVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 686

Query: 546 REMK 535
           R+ K
Sbjct: 687 RDDK 690


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  453 bits (1166), Expect(2) = e-130
 Identities = 227/360 (63%), Positives = 262/360 (72%), Gaps = 2/360 (0%)
 Frame = -1

Query: 2117 MSSFDLILKAACEGCGSPSDLYGSNCKHKTLCPSCGKRMAENRARCNVCGVPITKLIREY 1938
            M++ DL+LK +C GCGS +DLYGSNCKH TLC SCGK MAEN A+C  CG  +++LIREY
Sbjct: 1    MATMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREY 60

Query: 1937 NVRASASTDKSYFIGRFVTGLPPFSKKKHAENEWTLHKDGLQGRQLTDGLREKYKNKPWL 1758
            NVRAS+S+DK+YFIGRFVTGLP FSKKK+AEN+W+L K+GLQGRQLTD LREKYKN+PWL
Sbjct: 61   NVRASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWL 120

Query: 1757 LEDETGQHQFQGQLEGAQSATYYLLVMHGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEK 1578
            LEDETGQ Q+QG LEG+QSATYYLL++ GKEFVAIPASSWYNFNKVAQYKQLTLEEAEEK
Sbjct: 121  LEDETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEK 180

Query: 1577 MNKRKSNATGYERWMMKAATNGAAVFGEMKKLESMSDGGAEGNRSKKVKSED-TGDHSDK 1401
            M  R+  A GYERWMMKAA NG A FGE++KL+    G A G   KK   +D  G+ SD+
Sbjct: 181  MRNRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDR 240

Query: 1400 GEEDVDEEEARKSRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 1221
            G+ED +EE ARK+RLGLN                           DWEHEEIFTDDDEAV
Sbjct: 241  GDEDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAV 300

Query: 1220 GNDPEEREDLAPEIPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXXKAAGMNESDAED 1044
            GND EEREDLAPE+PAPPEIKQ                          +A G+N+SDAED
Sbjct: 301  GNDREEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGRAGGLNDSDAED 360



 Score = 44.3 bits (103), Expect(2) = e-130
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -3

Query: 1038 MEDETAMSPVLAPKQKDGPKDEPADNSPSKTTPAGSAR 925
            M+++ ++SPVLAPKQ   PK+EPADNSP+K   + S++
Sbjct: 367  MDEDVSISPVLAPKQT--PKEEPADNSPAKPMTSASSK 402



 Score =  100 bits (250), Expect = 4e-18
 Identities = 51/62 (82%), Positives = 55/62 (88%)
 Frame = -3

Query: 726 PVTEEEIRSVLLATAPVTTQDLVANFKGRIKSQEDKKAFADILRRISKIQKTNGHSYVVL 547
           PVTEEEIR+VLL   PVTTQDLVA FK R+KS EDKKAFADILRRISKIQKT+G SYVVL
Sbjct: 471 PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVL 530

Query: 546 RE 541
           R+
Sbjct: 531 RD 532