BLASTX nr result
ID: Ophiopogon21_contig00008574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00008574
(3001 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase V sub... 633 e-178
ref|XP_008812396.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 629 e-177
gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ... 629 e-177
ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub... 627 e-176
gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria ital... 624 e-175
ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub... 609 e-171
ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V sub... 607 e-170
ref|XP_010238829.1| PREDICTED: DNA-directed RNA polymerase V sub... 603 e-169
ref|XP_008679943.1| PREDICTED: DNA-directed RNA polymerase V sub... 600 e-168
ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub... 593 e-166
ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V sub... 585 e-164
ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V sub... 584 e-163
gb|KMT17107.1| hypothetical protein BVRB_2g041610 [Beta vulgaris... 583 e-163
ref|XP_010670484.1| PREDICTED: DNA-directed RNA polymerase V sub... 583 e-163
gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo... 583 e-163
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 583 e-163
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 582 e-163
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub... 582 e-163
ref|XP_011469364.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 580 e-162
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 575 e-160
>ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Setaria italica]
Length = 2038
Score = 633 bits (1632), Expect = e-178
Identities = 385/1021 (37%), Positives = 565/1021 (55%), Gaps = 23/1021 (2%)
Frame = +3
Query: 6 KANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIG 185
K Y+ND+ DR+V+L+LN+C C KKFC+E AAL VQ+CLR V L CA D+SIE+QKQI
Sbjct: 873 KVGYKNDMKDRKVILFLNDCSCPKKFCKERAALTVQSCLRRVTLADCATDISIEHQKQIN 932
Query: 186 LPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLS 365
L +S A LVGHIHLD +L+ +N +T IL KC+E++ + +KKGHL ++F++ S
Sbjct: 933 LDETSEAAPTLVGHIHLDKAQLERINISTQDILQKCEEISGRYGKKKGHLCHLFKKITFS 992
Query: 366 SSECCGSQQPNDGNLSEFPCLQFSYFAG--AVDETLEHGMHIMINTICPILLDTIVKGDP 539
+ +C +Q DG L PC+QFS+ + E++E ++++ +++C +LLDTI+KGDP
Sbjct: 993 TCDCSFAQNTIDGYLHVAPCVQFSFSDDNTILSESVERAVNVIADSVCSVLLDTIIKGDP 1052
Query: 540 RVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHL 719
R+ + IIW +ATSWV + TLKGE LE++V+K A + G AWR V+DAC+PV++L
Sbjct: 1053 RIQSAKIIWVESEATSWVKNTQNTLKGEPTLEIIVEKDEAVRNGYAWRTVMDACIPVLNL 1112
Query: 720 IDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNL 899
IDT RSIPYGIQQ+KEL GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNL
Sbjct: 1113 IDTRRSIPYGIQQVKELLGISCAFDQVVQRLSTTVKMVAKGVLKDHLILVANSMTCTGNL 1172
Query: 900 IGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAL 1079
IGFNTSG+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG VVSS SWGKH A+
Sbjct: 1173 IGFNTSGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSCSWGKHAAI 1232
Query: 1080 GTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQND 1259
GTG+ F+++W + Q+ N++ G +YD LA VR QEK G D++ +++ D
Sbjct: 1233 GTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--AGYAFLDDVDYLVEENAVD 1289
Query: 1260 EMPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNGN--KSNWENVSPTVVESDNWQAW 1433
++ LSPEP H KPTFE D+ E G + +N S+WE + +S +W W
Sbjct: 1290 DVCLSPEPDGTHGKPTFE--DNVEEQGIQNGSSWENDTTMNSSWEQNASAGNDSGDWGGW 1347
Query: 1434 --GSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIES 1607
G+ T + + S W+ + S DW WG++ + + + ++W +
Sbjct: 1348 SNGAAAATKPLDQDNSCWDAHATVENNSTDWGGWGTEKQTNGEQAEINTW---------A 1398
Query: 1608 NSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSW 1787
+ G + DN WE S +S + N D G+ P + SA ++W
Sbjct: 1399 DKGAGMESSAGDDN-----WEMKSSAPEKS-----KKNLDHDTWGNMPAPASASASENTW 1448
Query: 1788 DTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTRVNEPVS 1967
K + + + + G DV + K P SS+ W++ + +
Sbjct: 1449 GEQKGDGGDGAWEKQ---TGSCKEQGMDVDQDSWGKKTMPP--SSNMWDK--KKSDGVHG 1501
Query: 1968 DWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTARKSDV 2147
+W+E+ SSW + V+ S W D EK + + DS W E S++ ++++
Sbjct: 1502 NWEEQ---PSSWNEQMLNVDQDS-WGDAREKN--NSHAGDSRWPEQA---STYKRKRTNA 1552
Query: 2148 ESPSGWQGNL---EQKAWSAKLPGIKECQGNK--SSWTARKPXXXXXXXXXXXXXNKAWS 2312
++ S W AW A + + SSW + + +
Sbjct: 1553 DAGS-WDNMAMAPSNNAWDAGEGFGRSITKSDAGSSWGNKDKMETDEHSKIPKEFDPWNT 1611
Query: 2313 AKSPDSGWKRSEENESSWIAKKSGGNTSGQCENVEKDAW------SAKSLESGWNQKA-- 2468
KS +S W++++ + SW GN++ N ++ +W S + W A
Sbjct: 1612 GKSNESSWEKTDALQDSW------GNSAADNNNTQEGSWDKIAVKDTNSQQDSWGNVAVQ 1665
Query: 2469 -ENQENLTWIAKKPEVDSLPGGNESEGQAWTPRA-TEAKSSPGWNESGGNPWVAKTPEIG 2642
+N +N +W +V + + A TP ++AK S W+ G N A+ + G
Sbjct: 1666 NKNTQNGSWDNGAEKVPTSDAQDSWGNLAATPAGNSDAKQSDSWD--GWNAAPAENSQ-G 1722
Query: 2643 SPTXXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGWRRAEAF--TTEE 2816
+ G +NNS RPP P++RG + F T EE
Sbjct: 1723 KCNETTDSGDNKGWKSEGWGGKSGNWSGQRNNSGRPPRG--PDERGPPPPRQRFELTAEE 1780
Query: 2817 EKILVDVEPIMNSIRKILRESSDGSRVSPEDQKFITENVFEFHPDKQSKVSDQIDYIMVD 2996
+ IL+++EPIM +R+I RE+ +G R+ PED+KFI E V E HP+KQSKVS IDYI VD
Sbjct: 1781 KNILLEIEPIMMRVRRIFREACNGVRLQPEDEKFILEKVLENHPEKQSKVSSAIDYITVD 1840
Query: 2997 K 2999
K
Sbjct: 1841 K 1841
>ref|XP_008812396.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1-like [Phoenix dactylifera]
Length = 1656
Score = 629 bits (1623), Expect = e-177
Identities = 360/771 (46%), Positives = 459/771 (59%), Gaps = 24/771 (3%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
CK ++N + DRRV+LYLN+C CGKKFC+ENAA+ VQNCL+ V LK CA D SIEYQK+I
Sbjct: 830 CKVTFKNVVTDRRVILYLNDCFCGKKFCKENAAITVQNCLKRVTLKDCACDFSIEYQKEI 889
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
L +SS T SGLVGHIHLD MRLK+LN++ D IL KCQ+V G+ +KKG LS+ FRR L
Sbjct: 890 SLRDSSETTSGLVGHIHLDKMRLKLLNRSPDEILRKCQDVIFGYGKKKGKLSHFFRRIIL 949
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD---ETLEHGMHIMINTICPILLDTIVKG 533
SECC ++QP+ GNLS FPCLQFSY E+LE G+H+M NTICPILLDTI+KG
Sbjct: 950 LVSECCSTRQPDVGNLSPFPCLQFSYCDQTATPDCESLERGIHVMANTICPILLDTIIKG 1009
Query: 534 DPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVM 713
DPRV NI+WTGP ATSWV + +TLKGE+A+EVVV+K A+R+ GDAWR V+DACLPVM
Sbjct: 1010 DPRVREANIVWTGPYATSWVRNSCKTLKGEVAVEVVVEKDASRRHGDAWRTVIDACLPVM 1069
Query: 714 HLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTG 893
HLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS I MV+KGV+K+HL+LV N+M+CTG
Sbjct: 1070 HLINTRRSIPYGIQQLQELLGISCAFDQAVQRLSASITMVAKGVLKDHLILVANSMSCTG 1129
Query: 894 NLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHV 1073
NLIGFNT+G+K FRSLKVQVPFTEATL+TPMKCFERAAEKCHTD+L SVVSS WGKHV
Sbjct: 1130 NLIGFNTAGYKXTFRSLKVQVPFTEATLITPMKCFERAAEKCHTDSLTSVVSSCLWGKHV 1189
Query: 1074 ALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQ 1253
A+GTG+ F+++W K+Q+ N+++GK YD L VR + + C D++D L +
Sbjct: 1190 AIGTGSPFQILW-NKRQMAENQNIGKGFYDFLELVRTSSQGEAGNGC-SVDVDD-LGVNE 1246
Query: 1254 NDEMPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNG--NKSNWENVSPTVVESDNWQ 1427
NDE+ LSPE EK TF+D + + K +NG S+WE +S +VV SD WQ
Sbjct: 1247 NDEVCLSPE--IGFEKLTFDDGFEVD-YNLKKDISMENGKVGNSSWEKLSDSVVGSDRWQ 1303
Query: 1428 AWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIES 1607
W +NGN+ P S WQ W
Sbjct: 1304 GW--------ENGNQ-------PEMDTSSGWQGW-------------------------- 1322
Query: 1608 NSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSW 1787
DNG + P + SD QG GN +S++PT R +VWSSW
Sbjct: 1323 ------------DNGKQ-------PFIDRSDRSQGWGNERVTDRENSKLPTARPSVWSSW 1363
Query: 1788 DTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVV-------------SSSG 1928
D + V+ +Q++ + + +S KS IW V + G
Sbjct: 1364 DASDVQERSQASSPKSQPRHVAS-----SSKSRIWSSQSSSKVADGSSVDTTSKGNAQDG 1418
Query: 1929 WNEPVTRVNEPVSDWK-ERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKEN 2105
WN +PV D RK +++ T S+ W S K S W EN
Sbjct: 1419 WNHVTESPAKPVWDTNITRKSHEADNTWNTSAFSKSNVWDGQSFDKVHNEGSDGGRWNEN 1478
Query: 2106 TGNKSSWTARKSDVESPSGWQGN-----LEQKAWSAKLPGIKECQGNKSSW 2243
T RK+ GW + Q+ +S K G+ + N+ W
Sbjct: 1479 QA-----TDRKNQSWKSHGWNSSNATDRRTQRNYSNKSLGMPD---NRKGW 1521
Score = 127 bits (318), Expect = 8e-26
Identities = 109/366 (29%), Positives = 153/366 (41%), Gaps = 27/366 (7%)
Frame = +3
Query: 1983 KGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTARKSDVESPSG 2162
K +SSW V S W E P SGW+ K + R + G
Sbjct: 1283 KVGNSSWEKLSDSVVGSDRW-QGWENGNQPEMDTSSGWQGWDNGKQPFIDRS---DRSQG 1338
Query: 2163 WQGNLEQKAWSAKLPGIKECQGNKSSWTAR--------KPXXXXXXXXXXXXXNKAWSAK 2318
W ++KLP + SSW A ++ WS++
Sbjct: 1339 WGNERVTDRENSKLPTARPSVW--SSWDASDVQERSQASSPKSQPRHVASSSKSRIWSSQ 1396
Query: 2319 SPDSGWKRSEENESSWIAKKSGGNTSGQCENVEKDAWSAK------SLESGWNQKAENQE 2480
S S + +S + G N E+ K W ++ WN A ++
Sbjct: 1397 SSSKVADGSSVDTTSKGNAQDGWNHV--TESPAKPVWDTNITRKSHEADNTWNTSAFSKS 1454
Query: 2481 NLTWIAK---KPEVDSLPGGNESEGQAWTPRATEAKSSPGWNESGGNPWVAKTPEIGSPT 2651
N+ W + K + GG +E QA T R ++ S GWN S
Sbjct: 1455 NV-WDGQSFDKVHNEGSDGGRWNENQA-TDRKNQSWKSHGWNSSNAT------------- 1499
Query: 2652 XXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGW----------RRAEA 2801
DRR +N S + + G P++R GW RR ++
Sbjct: 1500 ---------------------DRRTQRNYSNK--SLGMPDNRKGWNPNSLLTSTGRRLDS 1536
Query: 2802 FTTEEEKILVDVEPIMNSIRKILRESSDGSRVSPEDQKFITENVFEFHPDKQSKVSDQID 2981
FT EEE+ILV++EP M +IR+ILRESSDG ++S +DQKFI E VF+ HPDKQ+KV+DQID
Sbjct: 1537 FTVEEERILVEIEPTMQTIRRILRESSDGDQLSADDQKFILERVFQHHPDKQAKVADQID 1596
Query: 2982 YIMVDK 2999
+IMVDK
Sbjct: 1597 HIMVDK 1602
>gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
Length = 1673
Score = 629 bits (1622), Expect = e-177
Identities = 352/733 (48%), Positives = 449/733 (61%), Gaps = 22/733 (3%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
CK ++N + DRRV+LYLN+C CGKKFC+ENAA+AVQNCL+ V LK CA D SIEYQK+I
Sbjct: 872 CKVMFKNVVTDRRVILYLNDCFCGKKFCKENAAIAVQNCLKRVTLKDCACDFSIEYQKEI 931
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
L +SS T SGLVGHIHLD M LK+LN++ D IL KCQ+V G+ +KKG LS+ FRR L
Sbjct: 932 SLRDSSETTSGLVGHIHLDKMGLKLLNRSPDEILRKCQDVIFGYAKKKGKLSHFFRRIIL 991
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD---ETLEHGMHIMINTICPILLDTIVKG 533
S SECC ++QP+ GNLS FPCLQFSY + E+LE +H+M NTICPILLDTI+KG
Sbjct: 992 SLSECCCTRQPDVGNLSPFPCLQFSYCDQSATPDCESLEGAIHVMANTICPILLDTIIKG 1051
Query: 534 DPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVM 713
DPRV NI+W GPDATSWV + +TLKGE+A+EVVV+K A R+ GDAWR V+DACLPVM
Sbjct: 1052 DPRVYDANIVWIGPDATSWVRNSCKTLKGEVAIEVVVEKDAVRRNGDAWRTVMDACLPVM 1111
Query: 714 HLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTG 893
HLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS I V+KGV+K+HL+LV N+MTCTG
Sbjct: 1112 HLINTRRSIPYGIQQLQELLGISCAFDQTVQRLSASITKVAKGVLKDHLILVANSMTCTG 1171
Query: 894 NLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHV 1073
NLIGFNT+G+KALFRSLKVQVPFTEATL+TPMKCFERAAEKCHTD+L SVVSS WGKHV
Sbjct: 1172 NLIGFNTAGYKALFRSLKVQVPFTEATLITPMKCFERAAEKCHTDSLASVVSSCLWGKHV 1231
Query: 1074 ALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQ 1253
A+GTG+ F+++W KQQ+ N+++GK YD L VR +++ C D++D L+ +
Sbjct: 1232 AIGTGSPFQILW-NKQQMAENQNIGKGFYDFLELVRTSSQREAGDGC-SLDVDD-LEANE 1288
Query: 1254 NDEMPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNG--NKSNWENVSPTVVESDNWQ 1427
N+E+ LSPE E+ TF+D + + K +NG KS+WE +S +V SD WQ
Sbjct: 1289 NNEVCLSPE--IGFEELTFDDGFDVD-YNLKKDVSMENGKVGKSSWEKISDSVAGSDRWQ 1345
Query: 1428 AWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIES 1607
W ++++ D S DWQ W D+G
Sbjct: 1346 GWENRNQPEMD---------------VSSDWQGW--------DNG--------------- 1367
Query: 1608 NSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSW 1787
++P TD N+S QG GN +S +PTTR +VWSSW
Sbjct: 1368 -------KQPFTDRSNRS---------------QGWGNEKVTDGENSILPTTRPSVWSSW 1405
Query: 1788 DTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVV-------------SSSG 1928
D V+ + ++ + + +S KS IW V + G
Sbjct: 1406 DATDVQERSPASSPKSQLGHVAS-----SSKSGIWGSQNFSKVADLRSVDSTSKSSTQDG 1460
Query: 1929 WNEPVTRVNEPVSDWK-ERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKEN 2105
WN +PV D RK +++ T S+ W S K S W EN
Sbjct: 1461 WNHVKESPAKPVWDTNVTRKSHEADNTWNTSAFSKSNVWGSQSFDKVHSEGSDGGRWNEN 1520
Query: 2106 ---TGNKSSWTAR 2135
SW +R
Sbjct: 1521 QVPDRKNQSWKSR 1533
Score = 133 bits (335), Expect = 8e-28
Identities = 136/473 (28%), Positives = 191/473 (40%), Gaps = 15/473 (3%)
Frame = +3
Query: 1626 KEKPSTDNGN--KSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSWDTAK 1799
K+ S +NG KS WEK+S VA SD WQG NR+Q EM S+ W WD
Sbjct: 1316 KKDVSMENGKVGKSSWEKISDSVAGSDRWQGWENRNQ-----PEMDV--SSDWQGWD--- 1365
Query: 1800 VRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTRVNEPVSDWKE 1979
NG F + + N+ S GW NE V+D
Sbjct: 1366 --------------NGKQPFTD---------RSNR-----SQGWG------NEKVTD--- 1388
Query: 1980 RKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTARKSDVESPS 2159
G +S +P V SS D E+ PA SP K G+ +S S S
Sbjct: 1389 --GENSILPTTRPSVWSSWDATDVQERS--PASSP----KSQLGHVAS--------SSKS 1432
Query: 2160 GWQGNLEQKAWSAKLPGIKECQGNKSSWTARKPXXXXXXXXXXXXXNKAWSAKSPDSGWK 2339
G G+ +K+ ++ S S GW
Sbjct: 1433 GIWGSQN----FSKVADLRSVDSTSKS--------------------------STQDGWN 1462
Query: 2340 RSEENESSWIAKKSGGNTSGQCENVEKDAWSAKSLESGWNQKAENQENLTWIAK---KPE 2510
+E+ + + + S + +N WN A ++ N+ W ++ K
Sbjct: 1463 HVKESPAKPVWDTNVTRKSHEADNT-------------WNTSAFSKSNV-WGSQSFDKVH 1508
Query: 2511 VDSLPGGNESEGQAWTPRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXXX 2690
+ GG +E Q R ++ S GWN S
Sbjct: 1509 SEGSDGGRWNENQV-PDRKNQSWKSRGWNSSNAT-------------------------- 1541
Query: 2691 XXXXXXFNDRRGPKNNSPRPPASGRPEDRGGW----------RRAEAFTTEEEKILVDVE 2840
DRR +N+S + + +DR GW RR ++FT EEE+IL+++E
Sbjct: 1542 --------DRRTQRNHSNKSAMTS--DDRKGWNSNSMMTSTRRRLDSFTVEEERILIEIE 1591
Query: 2841 PIMNSIRKILRESSDGSRVSPEDQKFITENVFEFHPDKQSKVSDQIDYIMVDK 2999
P M +IR+ILRESSDG ++S +DQKFI E VF+ HPDKQ+KV+DQID+IMVDK
Sbjct: 1592 PTMQTIRRILRESSDGDQLSADDQKFIIERVFQHHPDKQAKVADQIDHIMVDK 1644
>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis] gi|743822629|ref|XP_010932323.1| PREDICTED:
DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis] gi|743822631|ref|XP_010932324.1| PREDICTED:
DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
Length = 1708
Score = 627 bits (1616), Expect = e-176
Identities = 353/766 (46%), Positives = 462/766 (60%), Gaps = 34/766 (4%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
CK ++N + DRRV+LYLN+C CGKKFC+ENAA+AVQNCL+ V LK CA D SIEYQK+I
Sbjct: 872 CKVTFKNVVTDRRVILYLNDCLCGKKFCKENAAIAVQNCLKRVTLKDCACDFSIEYQKEI 931
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
L +SS T SGLVGHIHLD MRLK+LN++ D IL KCQ+V G+ +KKG LS+ FRR L
Sbjct: 932 SLRDSSETTSGLVGHIHLDKMRLKLLNRSPDEILRKCQDVIFGYGKKKGKLSHFFRRIIL 991
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD---ETLEHGMHIMINTICPILLDTIVKG 533
S SECC ++QP+ GNLS FPCLQFSY + E+LE +H+M NTICPILLDTI+KG
Sbjct: 992 SLSECCSTRQPDVGNLSPFPCLQFSYRDQSTTPDCESLEGAIHVMANTICPILLDTIIKG 1051
Query: 534 DPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVM 713
DPRV NI+WTGPDATSWV + +TLKGE+A+EVVV+K A R+ GDAWR V+DACLPV+
Sbjct: 1052 DPRVHEANIVWTGPDATSWVRNSCKTLKGEVAIEVVVEKDAVRRNGDAWRTVIDACLPVI 1111
Query: 714 HLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTG 893
HLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS I V+KGV+K HL+LV N+MTCTG
Sbjct: 1112 HLINTRRSIPYGIQQLQELLGISCAFDQTVQRLSASITKVAKGVLKGHLILVANSMTCTG 1171
Query: 894 NLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHV 1073
NLIGFNT+G+KALFRSLKVQVPFTEATL+TPMKCFERAAEKCHTD+L SVVSS WGKHV
Sbjct: 1172 NLIGFNTAGYKALFRSLKVQVPFTEATLITPMKCFERAAEKCHTDSLVSVVSSCLWGKHV 1231
Query: 1074 ALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQ 1253
A+GTG+ F+++W KQQ+ N+++GK YD L VR +++ C D++D L+ +
Sbjct: 1232 AIGTGSPFQILW-NKQQMAENQNIGKGFYDFLELVRTSSQREAGDGC-SLDVDD-LEVNE 1288
Query: 1254 NDEMPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNG--NKSNWENVSPTVVESDNWQ 1427
N+E+ LSPE E+ TF+D + + K +NG S+WE +S +V SD WQ
Sbjct: 1289 NNEVCLSPE--IGFEELTFDDGFDID-YNCKKDVSMENGKVGNSSWEKISDSVAGSDRWQ 1345
Query: 1428 AWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIES 1607
W ++++ D S WQ W + +P D N S
Sbjct: 1346 GWENRNQPEMD---------------MSSGWQGWDNGKQPFTDQSNTS------------ 1378
Query: 1608 NSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSW 1787
QG GN+ +S+ PTTR++VWSSW
Sbjct: 1379 ---------------------------------QGWGNKKVTDGENSKPPTTRTSVWSSW 1405
Query: 1788 DTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVV-------------SSSG 1928
D + V+ + ++ + + +S KS IW V + G
Sbjct: 1406 DASDVQERSPASSPKSQLGHVAS-----SSKSGIWGSQSSSKVADLRSVDTTSNSSTQDG 1460
Query: 1929 WNEPVTRVNEPVSD---WKERKGNDSSWTA---KKPEVESSSGWADNSEKKAWPA----- 2075
WN +PV D ++ G D++W K V S + D + W
Sbjct: 1461 WNHVKESPAKPVWDTNVTRKSHGADNTWNTSAFSKSNVWDSQSF-DKVHNEGWDGGKWNE 1519
Query: 2076 -KSPD---SGWKENTGNKSSWTARKSDVESPSGWQGNL-EQKAWSA 2198
+ PD WK + N S+ T R++ + G ++K W++
Sbjct: 1520 NQVPDHKNQSWKSRSWNSSNATDRRTQRNLSNKSAGTSDDRKGWNS 1565
Score = 127 bits (318), Expect = 8e-26
Identities = 106/357 (29%), Positives = 150/357 (42%), Gaps = 18/357 (5%)
Frame = +3
Query: 1983 KGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTARKSDVESPSG 2162
K +SSW V S W E + P SGW+ K +T + + + G
Sbjct: 1325 KVGNSSWEKISDSVAGSDRW-QGWENRNQPEMDMSSGWQGWDNGKQPFTDQSN---TSQG 1380
Query: 2163 WQGNLEQKAWSAKLPGIKECQGNKSSWTARKPXXXXXXXXXXXXXNKAWSAKSPDS--GW 2336
W ++K P + SSW A + A SP S G
Sbjct: 1381 WGNKKVTDGENSKPPTTRTSVW--SSWDASD-------------VQERSPASSPKSQLGH 1425
Query: 2337 KRSEENESSWIAKKSGGNTSGQCENVEK-DAWSAKSLESGWNQKAENQENLTW----IAK 2501
S W G +S + ++ D S S + GWN E+ W K
Sbjct: 1426 VASSSKSGIW-----GSQSSSKVADLRSVDTTSNSSTQDGWNHVKESPAKPVWDTNVTRK 1480
Query: 2502 KPEVDSLPGGNE-SEGQAWTPRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXX 2678
D+ + S+ W ++ + + GW+ G W +
Sbjct: 1481 SHGADNTWNTSAFSKSNVWDSQSFDKVHNEGWD---GGKW--------NENQVPDHKNQS 1529
Query: 2679 XXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGW----------RRAEAFTTEEEKIL 2828
DRR +N S + ++G +DR GW RR ++FT EEE+IL
Sbjct: 1530 WKSRSWNSSNATDRRTQRNLSNK--SAGTSDDRKGWNSNSMMTSTRRRLDSFTVEEERIL 1587
Query: 2829 VDVEPIMNSIRKILRESSDGSRVSPEDQKFITENVFEFHPDKQSKVSDQIDYIMVDK 2999
V++EP M +IR+ILRESSDG R+S +DQKFI E VF+ HPDKQ+KV+DQID+IMVDK
Sbjct: 1588 VEIEPTMQTIRRILRESSDGDRLSADDQKFIIEKVFQHHPDKQAKVADQIDHIMVDK 1644
>gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria italica]
Length = 2050
Score = 624 bits (1609), Expect = e-175
Identities = 385/1033 (37%), Positives = 565/1033 (54%), Gaps = 35/1033 (3%)
Frame = +3
Query: 6 KANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIE------ 167
K Y+ND+ DR+V+L+LN+C C KKFC+E AAL VQ+CLR V L CA D+SIE
Sbjct: 873 KVGYKNDMKDRKVILFLNDCSCPKKFCKERAALTVQSCLRRVTLADCATDISIEGERQKY 932
Query: 168 ------YQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKG 329
+QKQI L +S A LVGHIHLD +L+ +N +T IL KC+E++ + +KKG
Sbjct: 933 VVCIFRHQKQINLDETSEAAPTLVGHIHLDKAQLERINISTQDILQKCEEISGRYGKKKG 992
Query: 330 HLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAG--AVDETLEHGMHIMINTIC 503
HL ++F++ S+ +C +Q DG L PC+QFS+ + E++E ++++ +++C
Sbjct: 993 HLCHLFKKITFSTCDCSFAQNTIDGYLHVAPCVQFSFSDDNTILSESVERAVNVIADSVC 1052
Query: 504 PILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWR 683
+LLDTI+KGDPR+ + IIW +ATSWV + TLKGE LE++V+K A + G AWR
Sbjct: 1053 SVLLDTIIKGDPRIQSAKIIWVESEATSWVKNTQNTLKGEPTLEIIVEKDEAVRNGYAWR 1112
Query: 684 IVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLV 863
V+DAC+PV++LIDT RSIPYGIQQ+KEL GISCAFDQ VQRLS ++MV+KGV+K+HL+
Sbjct: 1113 TVMDACIPVLNLIDTRRSIPYGIQQVKELLGISCAFDQVVQRLSTTVKMVAKGVLKDHLI 1172
Query: 864 LVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSV 1043
LV N+MTCTGNLIGFNTSG+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG V
Sbjct: 1173 LVANSMTCTGNLIGFNTSGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGCV 1232
Query: 1044 VSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGS 1223
VSS SWGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK G
Sbjct: 1233 VSSCSWGKHAAIGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--AGYAFLD 1289
Query: 1224 DIEDFLDDFQNDEMPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNGN--KSNWENVS 1397
D++ +++ D++ LSPEP H KPTFE D+ E G + +N S+WE +
Sbjct: 1290 DVDYLVEENAVDDVCLSPEPDGTHGKPTFE--DNVEEQGIQNGSSWENDTTMNSSWEQNA 1347
Query: 1398 PTVVESDNWQAW--GSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKS 1571
+S +W W G+ T + + S W+ + S DW WG++ + + + +
Sbjct: 1348 SAGNDSGDWGGWSNGAAAATKPLDQDNSCWDAHATVENNSTDWGGWGTEKQTNGEQAEIN 1407
Query: 1572 SWEKASPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSE 1751
+W ++ G + DN WE S +S + N D G+
Sbjct: 1408 TW---------ADKGAGMESSAGDDN-----WEMKSSAPEKS-----KKNLDHDTWGNMP 1448
Query: 1752 MPTTRSAVWSSWDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGW 1931
P + SA ++W K + + + + G DV + K P SS+ W
Sbjct: 1449 APASASASENTWGEQKGDGGDGAWEKQ---TGSCKEQGMDVDQDSWGKKTMPP--SSNMW 1503
Query: 1932 NEPVTRVNEPVSDWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTG 2111
++ + + +W+E+ SSW + V+ S W D EK + + DS W E
Sbjct: 1504 DK--KKSDGVHGNWEEQ---PSSWNEQMLNVDQDS-WGDAREKN--NSHAGDSRWPEQA- 1554
Query: 2112 NKSSWTARKSDVESPSGWQGNL---EQKAWSAKLPGIKECQGNK--SSWTARKPXXXXXX 2276
S++ ++++ ++ S W AW A + + SSW +
Sbjct: 1555 --STYKRKRTNADAGS-WDNMAMAPSNNAWDAGEGFGRSITKSDAGSSWGNKDKMETDEH 1611
Query: 2277 XXXXXXXNKAWSAKSPDSGWKRSEENESSWIAKKSGGNTSGQCENVEKDAW------SAK 2438
+ + KS +S W++++ + SW GN++ N ++ +W
Sbjct: 1612 SKIPKEFDPWNTGKSNESSWEKTDALQDSW------GNSAADNNNTQEGSWDKIAVKDTN 1665
Query: 2439 SLESGWNQKA---ENQENLTWIAKKPEVDSLPGGNESEGQAWTPRA-TEAKSSPGWNESG 2606
S + W A +N +N +W +V + + A TP ++AK S W+ G
Sbjct: 1666 SQQDSWGNVAVQNKNTQNGSWDNGAEKVPTSDAQDSWGNLAATPAGNSDAKQSDSWD--G 1723
Query: 2607 GNPWVAKTPEIGSPTXXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGW 2786
N A+ + G + G +NNS RPP P++RG
Sbjct: 1724 WNAAPAENSQ-GKCNETTDSGDNKGWKSEGWGGKSGNWSGQRNNSGRPPRG--PDERGPP 1780
Query: 2787 RRAEAF--TTEEEKILVDVEPIMNSIRKILRESSDGSRVSPEDQKFITENVFEFHPDKQS 2960
+ F T EE+ IL+++EPIM +R+I RE+ +G R+ PED+KFI E V E HP+KQS
Sbjct: 1781 PPRQRFELTAEEKNILLEIEPIMMRVRRIFREACNGVRLQPEDEKFILEKVLENHPEKQS 1840
Query: 2961 KVSDQIDYIMVDK 2999
KVS IDYI VDK
Sbjct: 1841 KVSSAIDYITVDK 1853
>ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Oryza
brachyantha]
Length = 1993
Score = 609 bits (1571), Expect = e-171
Identities = 395/1074 (36%), Positives = 559/1074 (52%), Gaps = 79/1074 (7%)
Frame = +3
Query: 15 YQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPN 194
Y+ND DR+++L+LN+C C KKFC+E AA+AVQ CLR + L+ CA D+ IEYQKQI L
Sbjct: 875 YKNDTKDRKIILFLNDCSCAKKFCKEKAAIAVQGCLRRITLEDCATDICIEYQKQISLDG 934
Query: 195 SSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSE 374
+S + LVGHIH D L+ +N + + I KCQEV+ + +KKGHLS++F+ S +
Sbjct: 935 TSEASPALVGHIHFDRAHLERINVSIEDIFQKCQEVSGKYGKKKGHLSHLFKNITFSICD 994
Query: 375 CCGSQQPNDGNLSEFPCLQFSYFAG--AVDETLEHGMHIMINTICPILLDTIVKGDPRVD 548
C +Q+ DG L++ PCLQF + + E++E ++++ +++C +LL+TI+KGDPR+
Sbjct: 995 CSFTQKLIDGKLAKVPCLQFFFPESNTMLSESVEGAVNLLADSVCGVLLNTIIKGDPRIQ 1054
Query: 549 AVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDT 728
I+W G DATSWV + + KGE A+E++V++ A GD+WRI +DAC+PV+ LIDT
Sbjct: 1055 EAKIVWVGSDATSWVKNTKKESKGEPAVEIIVEEQEALHTGDSWRITMDACIPVLDLIDT 1114
Query: 729 TRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGF 908
RSIPYGIQQ++EL GISCAFDQ VQRLS +RMV+K V+K+HLVLV N+MT TGNL GF
Sbjct: 1115 RRSIPYGIQQLRELLGISCAFDQVVQRLSTTVRMVAKDVLKDHLVLVANSMTFTGNLNGF 1174
Query: 909 NTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTG 1088
NT+G+K FRSLKVQVPFTE+TL+TPMKCFE+AAEKCH+D+LG VVSS SWGK+ A GTG
Sbjct: 1175 NTAGYKTTFRSLKVQVPFTESTLITPMKCFEKAAEKCHSDSLGCVVSSCSWGKYAASGTG 1234
Query: 1089 THFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDEMP 1268
+ F+++W + Q+ N++ G +YD LA VR +EK D D+L + ++
Sbjct: 1235 SSFQILWNE-SQLKSNKEYGDGLYDYLALVRTDEEK---ARYTFFDDVDYLAEENETDVC 1290
Query: 1269 LSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNGNKSN--WENVSPTVVESDNWQAWGS- 1439
LSPE +PTF+ D+ E ++ +NG +N WE +SD W W +
Sbjct: 1291 LSPELEGTIGQPTFD--DNLEEQDFQKNNSWENGTAANGSWEQNGSAGDDSDKWGGWNAA 1348
Query: 1440 -----KDKTSADNGNKSRWEKVSPTAVESDDWQPWGSK-------------------AKP 1547
T + KS W+ + S DW WG++ AK
Sbjct: 1349 AVGADTAVTKQADQEKSCWDVPAAVEKSSSDWGGWGTEKRKVKENLPEEPAEHDAWLAKR 1408
Query: 1548 SADSGN------------------------------KSSWEKASPAVIESNSQWGRKEKP 1637
S D G+ +W+K P ++ W ++
Sbjct: 1409 SMDGGDINWGKQPSISDEFKKNVDQGSWGNMSLSAENRAWDKKKPD--GGDATWNKQSST 1466
Query: 1638 STDNGN-----KSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSWDTAKV 1802
D G+ S W++ + SW+ + N + + G+ E + +W V
Sbjct: 1467 QNDGGDTWEKQPSAWKENKGRGSNGGSWE-KSNSQKGSWGNDEAHNNANMKQDTW--GSV 1523
Query: 1803 RHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWN-EPVTRVNE------P 1961
N TQ+ K + + N +KS W N S + WN PV++ NE P
Sbjct: 1524 TAHNNDTQN-KSWGTVDAKANTSTEKS--W-GNVIASPSDNAWNAAPVSQGNENSDAKQP 1579
Query: 1962 VS--DWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTAR 2135
S W + +DSS K+P ++ + N+ A ++ +S + +G+ W +
Sbjct: 1580 GSWEGWNSARADDSSTKDKEPWGNVAASPSFNAWNAAPVSQGDESSDAKQSGSWEGWNSA 1639
Query: 2136 KSD---VESPSGWQ---GNLEQKAWSAKLPGIKECQGNKSSWTARKPXXXXXXXXXXXXX 2297
++D + W + AW+A C GN+SS
Sbjct: 1640 RADNSTTKDKEPWDNVVASSSDNAWNA----APVCHGNESS---------------DAKQ 1680
Query: 2298 NKAWSAKSPDSGWKRSEENESSWIAKKSGGNTSGQCENVEKDAWSAKSLESGWNQKAENQ 2477
+ +W GW S + S +S GN ++ +S WN +Q
Sbjct: 1681 SGSW------EGWNSSRAEDLSRKDNESWGNV------------ASSPSDSAWNAAPVSQ 1722
Query: 2478 ENLTWIAKKPEVDSLPGGNESEGQAWTPRATEAKSSPGWNESGGNPWVAKTPEIGSPTXX 2657
EN K+P S G N S QA P + KS GW GGN W + G P
Sbjct: 1723 ENKNSDTKQP--GSWDGWNSS--QADEPSNKDWKSD-GWGARGGN-WRGQRSNPGRPPRK 1776
Query: 2658 XXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGWRRAEAFTTEEEKILVDV 2837
+D RGP PR RP+DRG RR T EEEKIL ++
Sbjct: 1777 ------------------SDGRGP----PR-----RPDDRGPPRRHFDLTPEEEKILGEI 1809
Query: 2838 EPIMNSIRKILRESSDGSRVSPEDQKFITENVFEFHPDKQSKVSDQIDYIMVDK 2999
EPI+ SIRKI RES DG R+S ED+KFI ENV E HP+KQSKVS +ID+IMVDK
Sbjct: 1810 EPIVLSIRKIFRESIDGIRLSLEDEKFIKENVLEHHPEKQSKVSGEIDHIMVDK 1863
>ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
gi|720093477|ref|XP_010246064.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Nelumbo nucifera]
gi|720093480|ref|XP_010246066.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Nelumbo nucifera]
Length = 1908
Score = 607 bits (1565), Expect = e-170
Identities = 397/1055 (37%), Positives = 560/1055 (53%), Gaps = 56/1055 (5%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
C+A+++NDLIDRRV+LYLN+C CG +C+E AA VQN L+ V L A+D SI+YQKQ
Sbjct: 873 CRASFKNDLIDRRVILYLNDCGCGGYYCKEKAAYIVQNHLKRVSLMDIAVDFSIKYQKQC 932
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
P +S T +GLVGHIHLD M LK LN++ IL CQE +KK L +I RR L
Sbjct: 933 IFPGNSVTNAGLVGHIHLDKMSLKALNRSMADILKDCQETLNSFRKKKDQLGHILRRVLL 992
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDPR 542
SECC + P D SEFPCLQF + + D +++ IM N +CPILL T +KGDP+
Sbjct: 993 LVSECCSVRLP-DKERSEFPCLQFLWEDTSSD-SIQRISKIMANKVCPILLGTNIKGDPQ 1050
Query: 543 VDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLI 722
V + NI+WT PD SWV +P + GEL LEVVV K A ++ GDAWR+VL++CLPV+HL+
Sbjct: 1051 VLSANIMWTSPDVCSWVRNPCKIQNGELVLEVVVDKAAVKRTGDAWRVVLNSCLPVIHLV 1110
Query: 723 DTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLI 902
DT RSIPYGI+QI+EL GISCAFDQ+VQRLS +RMV+KGV+KEHL+L N+MTCTGN+I
Sbjct: 1111 DTRRSIPYGIKQIQELLGISCAFDQAVQRLSSSVRMVTKGVLKEHLILAANSMTCTGNMI 1170
Query: 903 GFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALG 1082
GFN+ G+KAL RSL V VPFTEATL TP KCFE+AA+KCH D+L S+V+S SWGKHV +G
Sbjct: 1171 GFNSGGYKALLRSLNVHVPFTEATLFTPRKCFEKAAQKCHMDSLSSIVASCSWGKHVTVG 1230
Query: 1083 TGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDE 1262
TG FE++W K+ + N+D DVYD L VR E D CLG +I+D + + E
Sbjct: 1231 TGAQFEILWNNKE-MGVNQDGEIDVYDFLQLVRGSNEGDSFTTCLGQEIDDLELENEERE 1289
Query: 1263 MPLSPEPSSAHEKPTFEDYDSC---EAWGWKGKPCADNGNKSNWENVSPTVVESDNWQ-- 1427
+ LSP ++ KP F+D + C ++WG + + NG W+ W+
Sbjct: 1290 LSLSPNVNTCFNKPVFDD-NGCLGEDSWGKQAEKEGING----WDKNEKQPEGGQQWELH 1344
Query: 1428 AWGS--KDKTSADNGNKSRWEKVSPTAVESDDW------QPWGSKAKPSADSGNKSSWEK 1583
+W + + K ++ W P DW Q W K S +W+
Sbjct: 1345 SWDTNMEQKQASQPKGSLGWGSXEPV-----DWTGKEVTQGWQLKQS----SVKLQTWKG 1395
Query: 1584 ASPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTT 1763
V +S+ + ++ T G +S W+ ++ E Q +GN+ L
Sbjct: 1396 KVEEVGKSSWEINEQQSSLTQQGERSNWD----IIVE----QKQGNQCSL---------- 1437
Query: 1764 RSAVWSSWDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPV 1943
WD+ K S+ +T+S + G+ S + KS W+ + E V+ S WN+
Sbjct: 1438 ------DWDSLK---SSNTTKSETKTQGWQS--KEPPVKSLTWE-GQAEGVNRSDWND-- 1483
Query: 1944 TRVNEPVSDWKERKGNDSSWT--AKKPEVESSSGWAD--NSEKKAWPAKSPDSGWKENTG 2111
N+ DW + + + + T A+K + GW +S + ++ D KE+
Sbjct: 1484 ---NKQECDWGQLRVSTTCDTNVAQKQGTQPCLGWGSPKSSGRTKNELRTEDWQLKESPI 1540
Query: 2112 NKSSWTARKSDVESPSGWQGNLEQKAWSAKLPGIKECQGNKSSWT---ARKPXXXXXXXX 2282
+W + + SGW GN +Q + LP Q S+W A+K
Sbjct: 1541 KSXTWKEWTKETDG-SGWCGNDQQ----SDLPQ----QMESSTWVTSIAQKGSQPSHGWG 1591
Query: 2283 XXXXXNKAWSAKSPDSGWKRSEE--NESSWIAKKSGGNTSG------QCENVEKDAWSAK 2438
NK + GWK E + +W + G + SG Q ++V+ + +
Sbjct: 1592 SSTSSNKT-KREMKTEGWKLKESVVKQQTWKDQVLGTDRSGWDRNEQQLDSVDWEQGKST 1650
Query: 2439 SLESGWNQKAENQENLTWIAKKPEVDSLPGGNESEGQAWTPRAT-------EAKSSPG-- 2591
+ +S K ++Q +L W + K S G NE++ + W + E S G
Sbjct: 1651 TWDSNLTPKQQSQPSLGWNSPK---SSDGGRNENKTKGWELKEPMKSQNWEEQTSQQGSE 1707
Query: 2592 ----WNESGGNP-----W---VAKTPEIGSPTXXXXXXXXXXXXXXXXXXXFNDRRGPKN 2735
W +S G+P W V K P + PT D + KN
Sbjct: 1708 AHLQWGQSSGSPIKSHGWGTNVMKKP-LKQPTSSRTWGS-------------GDWKNKKN 1753
Query: 2736 NSPRPPASGRPEDRGGW-----RRAEAFTTEEEKILVDVEPIMNSIRKILRES--SDGSR 2894
+P SG + G +R + FT+EE+ IL +EPIM SI++I+ +S +DG R
Sbjct: 1754 RTPGKLDSGNDCNSSGIFTVNRQRFDVFTSEEQNILSKIEPIMQSIKRIMHQSRYNDGDR 1813
Query: 2895 VSPEDQKFITENVFEFHPDKQSKVSDQIDYIMVDK 2999
+S EDQ F+ ENVF +HPDK K+ D IDY+MVDK
Sbjct: 1814 LSIEDQSFVLENVFNYHPDKAIKMGDGIDYVMVDK 1848
>ref|XP_010238829.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Brachypodium
distachyon] gi|944057016|gb|KQJ92654.1| hypothetical
protein BRADI_4g45065 [Brachypodium distachyon]
Length = 1954
Score = 603 bits (1554), Expect = e-169
Identities = 367/1044 (35%), Positives = 542/1044 (51%), Gaps = 46/1044 (4%)
Frame = +3
Query: 6 KANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIG 185
K +Y+ND DR+V+L+LN+C C KKFC+E AA+AVQN L+ V L+ CA D+ IEY KQI
Sbjct: 872 KVSYKNDTNDRKVILFLNDCSCPKKFCKEKAAIAVQNRLKRVTLEDCATDICIEYHKQI- 930
Query: 186 LPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLS 365
L SS LVGHIHL+ RL ++N +T+ IL KCQEV+ H +KKGHL ++F++ S
Sbjct: 931 LDGSSEATPALVGHIHLEKARLDMINVSTEDILQKCQEVSLKHGKKKGHLGHLFKKITFS 990
Query: 366 SSECCGSQQPN-DGNLSEFPCLQFSYFAGA--VDETLEHGMHIMINTICPILLDTIVKGD 536
+ +C +Q+P DG L + PCLQFS+ + E++E + ++ N++C +LLDTI+KGD
Sbjct: 991 TCDCSFTQKPMIDGKLPKVPCLQFSFSEDIPMLSESVERAVSVLANSLCDVLLDTIIKGD 1050
Query: 537 PRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMH 716
PR+ I+W G DA SWV + + KGE +E+VV+K A K+GDAWRI +DAC+PV+
Sbjct: 1051 PRIQEAKIMWVGSDAQSWVKNTRKVSKGEPTVEIVVEKNEASKQGDAWRIAMDACIPVID 1110
Query: 717 LIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGN 896
LIDT RSIPYGIQQ++EL GISC+FDQ VQRLS ++ V+KG++K+HL+LV N+MTCTGN
Sbjct: 1111 LIDTRRSIPYGIQQVRELLGISCSFDQIVQRLSTTMKTVAKGILKDHLILVANSMTCTGN 1170
Query: 897 LIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVA 1076
L GFNT G++A FR+LKVQVPFTE+TL TPMKCFE+AAEKCH+DALG VVSS SWGKH A
Sbjct: 1171 LYGFNTGGYRATFRALKVQVPFTESTLFTPMKCFEKAAEKCHSDALGCVVSSCSWGKHAA 1230
Query: 1077 LGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQN 1256
LGTG+ F+++W + Q+ N++ G +YD LA VR QEK D++ ++D
Sbjct: 1231 LGTGSSFQILWNE-NQLKSNKEYGDGLYDFLAMVRTDQEK--ARYTFLDDVDYLVEDNAM 1287
Query: 1257 DEMPLSPEPSSAHEKPTFED----YDSCEAWGWKGKPCADNGNKSN--WENVSPTVVESD 1418
D++ LSPE + H PTFED D+ W +NG K+N WE + +SD
Sbjct: 1288 DDICLSPELNGTHGVPTFEDNFEHQDTQNGNSW------ENGTKANASWEQNASAGNDSD 1341
Query: 1419 NWQAWGSKDKTS-------ADNGNKSRWEKVSPTAVESDDWQPWGS-KAKP----SADSG 1562
NW W + + AD GN S W+ + +S DW WG+ KAK S +
Sbjct: 1342 NWGGWSNAAAAADTGAAKPADQGNSS-WDVPATAENDSTDWGGWGNEKAKDNRTVSTEPA 1400
Query: 1563 NKSSWEK--ASPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLA 1736
+W A WG++ D+G E +SW R + L+
Sbjct: 1401 ELDTWSDRGAKKGTDGGGGSWGKQTNTCEDSGTN----------LERNSWAKRPSSPSLS 1450
Query: 1737 PGSSEMPTTRSAVWSSWDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVV 1916
+ + W + ++ Q + WK N P
Sbjct: 1451 TWAKKNSDGGDGTWDKQANSCKKNVEQDS----------------------WK-NMPVSP 1487
Query: 1917 SSSGWNEPVTRVNEPVSDWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGW 2096
+ + WN+ KE D++W + +E EKK ++S + W
Sbjct: 1488 ARNAWNK------------KESSRGDATWEMRASTLE---------EKKT--SESNEGSW 1524
Query: 2097 KENTGNKSSW-TARKSDVESPSGWQGNLEQKAWSAKLPGIKECQGNKSSWTARKPXXXXX 2273
+++ K SW + + + +++Q W + W +
Sbjct: 1525 EKSNAQKDSWGNTQHGSSDKMAVKDNDMQQDPWGH--IATQNINAQDDLWGSVAAKAQTS 1582
Query: 2274 XXXXXXXXNKAWSAKSPDSGWKRSEE---------NESSWIAKKSGGNTSGQCENVEKDA 2426
+ +W A + + ++E ++++W A ++ + + D+
Sbjct: 1583 TAENTDAQDDSWGAVAAKAQTSTAQESWGNVAASPSDNAWKAPPISQTSAAEHTDAHNDS 1642
Query: 2427 W--------SAKSLESGWNQKAENQENLTWIAKKPEVDS-LPGGNESEGQAWTPRATEAK 2579
W ++ + + W + + W A ++D+ PG + A + +A
Sbjct: 1643 WGIVAAKAQTSTAQQESWGNATASPSDNAWNAAPMDLDAKQPGSWDGWSSALAEDSNKAD 1702
Query: 2580 SS----PGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPR 2747
S GW G W AK +RR ++N
Sbjct: 1703 DSSNKNKGWKSDG---WGAK----------------------------GNRRDQRDNPSM 1731
Query: 2748 PPASGRPEDRGGWRRAEAFTTEEEKILVDVEPIMNSIRKILRESSDGSRVSPEDQKFITE 2927
PP RP++R R E E +KIL ++EPI++ +RKI RES DG R+ ED+KFI E
Sbjct: 1732 PPM--RPDERPPRPRFEV-PAEAKKILREIEPIVSMVRKIFRESCDGVRLPLEDEKFIKE 1788
Query: 2928 NVFEFHPDKQSKVSDQIDYIMVDK 2999
++ E HP+K+ KV +ID+IMV+K
Sbjct: 1789 SILEHHPEKERKVPGEIDHIMVNK 1812
>ref|XP_008679943.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Zea mays]
Length = 1932
Score = 600 bits (1546), Expect = e-168
Identities = 381/1029 (37%), Positives = 540/1029 (52%), Gaps = 31/1029 (3%)
Frame = +3
Query: 6 KANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIG 185
+ +Y+ND+ DR+VVL+LN+C C KKFC+E AALAVQ+CL+ V L CA D+ IE+QKQI
Sbjct: 873 RTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALAVQSCLKRVTLGDCATDICIEHQKQIN 932
Query: 186 LPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLS 365
L +S A LVGHIHLD L+ +N +T IL KCQEV+ +KKGHL +IF++ +
Sbjct: 933 LDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKKKGHLCHIFKKITFA 992
Query: 366 SSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTICPILLDTIVKGDPR 542
+ +C +Q P DG L + PC+QF++ V E++E ++++ +++C +LLDTI+KGDPR
Sbjct: 993 TCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSVCSVLLDTIIKGDPR 1052
Query: 543 VDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLI 722
+ A +IW DA SWV + KGE ALE++V+K A GDAWR +DACLPV++LI
Sbjct: 1053 IQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLI 1112
Query: 723 DTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLI 902
DT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLI
Sbjct: 1113 DTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLI 1172
Query: 903 GFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALG 1082
GFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH A+G
Sbjct: 1173 GFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVG 1232
Query: 1083 TGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDE 1262
TG+ F+++W + Q+ N++ G +YD LA VR QEK D++ +++ D+
Sbjct: 1233 TGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADD 1289
Query: 1263 MPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNGNKSNWENVSPTVVESDNWQAWGSK 1442
M LSPEP KPTFED N+E + + +W+ +
Sbjct: 1290 MCLSPEPDGTLGKPTFED---------------------NFE--EQNIQKGSSWEIGIT- 1325
Query: 1443 DKTSADNGNKSRWEKVSPTAVESDDWQPW----GSKAKPSADSGNKSSWEKASPAVIESN 1610
S WE+ + A +S DW W G+ AKP AD N SWE + S
Sbjct: 1326 --------TNSSWEQNASVANDSGDWGGWSSGGGAAAKP-ADQDN--SWEVHAKVQDNST 1374
Query: 1611 SQWG--RKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSS 1784
+ WG EKP +G +S AE+D+W +G + + G W
Sbjct: 1375 TDWGGWSVEKP-------TGEATVSGEPAETDTWADKGAKMESDAGDGN--------WEK 1419
Query: 1785 WDTAKVRHSNQSTQS----RKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTRV 1952
T + N S+++ RK G ++ N W+ S WN V
Sbjct: 1420 SSTPEASKKNDSSENTWDKRKGDGGDGAWGNRSDDGHGNWE-------HPSNWNGQSLDV 1472
Query: 1953 NEPVSDW------KERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGN 2114
++ W K+ GN W + + AD+ S + W N G+
Sbjct: 1473 DQ--DTWGNARGKKKADGNYCQWEEQPSNYKQKKTNADHDSSYNNVMPSSEIAW--NAGD 1528
Query: 2115 KSSWTARKSDVESPSGWQGNLEQKAWSAKLPGIKECQGNKSSWTARKPXXXXXXXXXXXX 2294
+ KS+ ES G + +E K+P KE +W
Sbjct: 1529 GTGRPNAKSNAESSWGEEDKMESDD-HPKVP--KE----SDTWN---------------- 1565
Query: 2295 XNKAWSAKSPDSGWKRSEENESSWIAKKSGGNTSGQCENVEKDAW-------SAKSLESG 2453
+ +S +S W ++ + SW+ + N N + +W SL+
Sbjct: 1566 -----TGRSNESPWDNTDALQDSWVKSAARNN------NTQDGSWDKVVSMKDLDSLQDS 1614
Query: 2454 WNQ---KAENQENLTW--IAKKPEVDSLPGGNESEGQAWTPRATEAKSSPGWNESGGNPW 2618
W++ + + +N +W +AK ++ E A TP T + W G W
Sbjct: 1615 WSKATIQTNDAQNDSWDNVAK----NAPDSAAEDSWGAATPAETTDSGNKEWKSDG---W 1667
Query: 2619 VAKTPEIGSPTXXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGWRRAE 2798
AK+ S +NN RPP RP++RG +
Sbjct: 1668 GAKSGNWSS---------------------------QRNNPGRPPR--RPDERGPPPPRQ 1698
Query: 2799 AF--TTEEEKILVDVEPIMNSIRKILRESSDGSRVSPEDQKFITENVFEFHPDKQSKVSD 2972
F T E+ IL++VEPI +R I RE+ DG R++PED+KFI E V E HP+KQSKVS
Sbjct: 1699 RFELTVAEKNILLEVEPIKLRVRSIFREACDGVRLNPEDEKFILEKVLEHHPEKQSKVSG 1758
Query: 2973 QIDYIMVDK 2999
+IDY+ V+K
Sbjct: 1759 EIDYLTVNK 1767
>ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Musa acuminata
subsp. malaccensis] gi|695009141|ref|XP_009391190.1|
PREDICTED: DNA-directed RNA polymerase V subunit 1 [Musa
acuminata subsp. malaccensis]
gi|695009143|ref|XP_009391191.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Musa acuminata subsp.
malaccensis]
Length = 1738
Score = 593 bits (1530), Expect = e-166
Identities = 350/761 (45%), Positives = 453/761 (59%), Gaps = 25/761 (3%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
CK +Y+ND+ DRRV+LYLN+CCC K+FC+ENAA V NCL+ V LK CA + IEYQKQI
Sbjct: 871 CKVSYKNDVSDRRVILYLNDCCCQKRFCKENAAFTVLNCLKRVTLKDCAHEFLIEYQKQI 930
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
G+ +SS T SGLVGHIHLD M+LK+LN D ILHKCQ V + +KKG LS+ FRR FL
Sbjct: 931 GVCDSSVTTSGLVGHIHLDKMQLKLLNINPDDILHKCQAVIFSYGKKKGQLSHFFRRIFL 990
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDE---TLEHGMHIMINTICPILLDTIVKG 533
S+ +CC +QP+DGNL PCLQFSY + +LE +H+M TICPILLDTIVKG
Sbjct: 991 STCKCCSIKQPSDGNLCHLPCLQFSYADANASQNNISLERAIHVMSETICPILLDTIVKG 1050
Query: 534 DPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVM 713
DPRV V I+W GPDATSWV S +TLKG+L LEVV+ + A R+ GDAWR VLDACLPVM
Sbjct: 1051 DPRVHEVKIVWIGPDATSWVGSSCKTLKGDLGLEVVLGQDAVRQSGDAWRTVLDACLPVM 1110
Query: 714 HLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTG 893
HLIDT RSIPYGIQQI+E+ GISCAFDQ+VQRLSK I+MVSKGV+KEHL+LV N+MTCTG
Sbjct: 1111 HLIDTGRSIPYGIQQIQEVLGISCAFDQAVQRLSKSIKMVSKGVMKEHLLLVANSMTCTG 1170
Query: 894 NLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHV 1073
LIGFNT G+KALFRS KV+VPFT ATL TPMKCFERAAEKC D+L SVVSS SWGK+V
Sbjct: 1171 KLIGFNTGGYKALFRSFKVEVPFTAATLFTPMKCFERAAEKCQVDSLASVVSSCSWGKNV 1230
Query: 1074 ALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQ 1253
A+GTG F+++W K+Q+ N+D+GK VYD L +RE + G L +D+++ ++
Sbjct: 1231 AIGTGAPFQILW-DKKQMAMNKDIGKGVYDFLELLRETSSGEATGRYL-ADVDELAEE-- 1286
Query: 1254 NDEMPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNG--NKSNWENVSPTVVESDNWQ 1427
+ + LSP+ TF+D D E + ++ + NG +S+WE V P V+S NW+
Sbjct: 1287 -NGICLSPDLDGC---MTFDDSDDVE-YNFQKRIGVVNGKSGESSWE-VDPVSVKSGNWE 1340
Query: 1428 AWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGS-----KAKPSAD------SGNKSS 1574
WG K+ T DN A + + W W S K S + G
Sbjct: 1341 GWGDKESTHVDN--------CESPATKHNVWSSWDSIQVKQKTVESENLAGDTVPGEDMD 1392
Query: 1575 WEKASPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSW-QGRGNRDQLAPGSSE 1751
+K S ES + WG+ + +GN + +KLS + W + + L GS
Sbjct: 1393 AQKHSGTADESVA-WGKWKA----DGNSTARDKLS----HRNCWNEASKTKVDLKEGSPV 1443
Query: 1752 MPTTRSAVWSSWDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGW 1931
T S+ S + + S T S + DN + N ++ GW
Sbjct: 1444 WNRTASSPKSKHNQDSL-FSTPGTWSSQSSGKPWGQDNAN---------NTKRNIAQDGW 1493
Query: 1932 ---NEPVTRVNEPVSDWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKE 2102
PVT + + S + +DS W+ P W N K DS W
Sbjct: 1494 RCAESPVTNIWDSTST-RNANVSDSQWSG-NPSKNLDIQWDGNDSN-----KDLDSQWCG 1546
Query: 2103 NTGNKSSWTARKSDVESPSGW-----QGNLEQKAWSAKLPG 2210
N + S+ + ++ + GW G QK +SA+ PG
Sbjct: 1547 NVTSTSNTSEGRNQSWNSRGWGSANPPGRKNQKTFSARFPG 1587
Score = 140 bits (352), Expect = 9e-30
Identities = 128/463 (27%), Positives = 191/463 (41%), Gaps = 15/463 (3%)
Frame = +3
Query: 1656 KSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSWDTAKVRHSNQSTQSRK 1835
+S WE + P+ +S +W+G G+++ + E P T+ VWSSWD+ +V+ Q T +
Sbjct: 1324 ESSWE-VDPVSVKSGNWEGWGDKESTHVDNCESPATKHNVWSSWDSIQVK---QKTVESE 1379
Query: 1836 EFNGFSSFDND-DVQKSPIWKPNKPEVVSSSGWNEPVTRVNEPVSDWKERKGNDSSWTAK 2012
G + D D QK + S W + WK D + TA+
Sbjct: 1380 NLAGDTVPGEDMDAQK------HSGTADESVAWGK-----------WKA----DGNSTAR 1418
Query: 2013 KPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTARKSDVESPSGWQGNLEQKAW 2192
++ + W + S+ K K W + S + S +P W K W
Sbjct: 1419 D-KLSHRNCWNEASKTKV-DLKEGSPVWNRTASSPKSKHNQDSLFSTPGTWSSQSSGKPW 1476
Query: 2193 SAKLPGIKECQGNKSSWTARKPXXXXXXXXXXXXXNKAWSAKSPDSGWKRSEENESS-WI 2369
Q N ++ T R GW+ +E ++ W
Sbjct: 1477 G---------QDNANN-TKRN---------------------IAQDGWRCAESPVTNIW- 1504
Query: 2370 AKKSGGNTSGQCENVEKDAWS---AKSLESGWNQKAENQE-NLTWIAKKPEVDSLPGGNE 2537
+TS + NV WS +K+L+ W+ N++ + W V S +E
Sbjct: 1505 -----DSTSTRNANVSDSQWSGNPSKNLDIQWDGNDSNKDLDSQWCGN---VTSTSNTSE 1556
Query: 2538 SEGQAWTPRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXXXXXXXXXFND 2717
Q+W R + + PG
Sbjct: 1557 GRNQSWNSRGWGSANPPG------------------------------------------ 1574
Query: 2718 RRGPKNNSPRPPASGRPEDRGGW---------RRAEAFTTEEEKILVDVEPIMNSIRKIL 2870
R+ K S R P G+ + GW RR E+ T EEEKIL +VEP+M +I++IL
Sbjct: 1575 RKNQKTFSARFP--GKSASQKGWNSNRALASGRRLESLTAEEEKILAEVEPVMLTIKRIL 1632
Query: 2871 RESSDGSRVSPEDQKFITENVFEFHPDKQSKVSDQIDYIMVDK 2999
+SSDG+R+S +DQKFI ENVF++HPDKQSKVSDQ+DYIMVDK
Sbjct: 1633 HDSSDGNRLSADDQKFILENVFKYHPDKQSKVSDQVDYIMVDK 1675
>ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
gi|778702723|ref|XP_011655251.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Cucumis sativus]
gi|700195913|gb|KGN51090.1| hypothetical protein
Csa_5G435050 [Cucumis sativus]
Length = 1963
Score = 585 bits (1508), Expect = e-164
Identities = 378/1085 (34%), Positives = 533/1085 (49%), Gaps = 86/1085 (7%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
CK +++N+ IDRRV+LYLNNC CG+K+C ENAA V++ L+ V LK A+D IEY +Q
Sbjct: 873 CKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDAAMDFMIEYNRQ- 931
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
P SG GLVGH+HL+ M LK LN +L +CQE +KK +++ R
Sbjct: 932 --PTPSGLGPGLVGHVHLNRMLLKELNIDMTEVLRRCQETMSSFKKKKKKIAHALR---F 986
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDPR 542
S SE C Q N + PCL F + D LE HI+ + + P+L +TI+KGDPR
Sbjct: 987 SISEHCAFHQWNGEESIDMPCLIFWHQTR--DVHLERTAHILADIVFPLLSETIIKGDPR 1044
Query: 543 VDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLI 722
+ + ++IW PD+TSW +P R GELAL+V ++K A ++ GDAWR VLD CLPV+HLI
Sbjct: 1045 IKSASVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLI 1104
Query: 723 DTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLI 902
DT RS+PY I+Q++EL GISCAFDQ +QRLSK + MVSKGV+ +HL+L+ N+MTCTGN+I
Sbjct: 1105 DTRRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMI 1164
Query: 903 GFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALG 1082
GFN+ G+KAL R+L +QVPFTEATL TP KCFE+AAEKCH D+L S+V+S SWGKHVA+G
Sbjct: 1165 GFNSGGYKALSRALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVG 1224
Query: 1083 TGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDE 1262
TG+ F+++W QK ++ C +D DVY+ L VR + ++ ACLG +IED + + + E
Sbjct: 1225 TGSRFDILWDQK-ELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEIEDIMVEDEYGE 1283
Query: 1263 MPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADN-GNKSNWENVSPTVVESDNWQAWGS 1439
+ LSPEP S EKP FED E C DN +S WE S W S
Sbjct: 1284 LTLSPEPFSTSEKPVFEDSAEFE-------HCLDNYPGESKWEKAPSLGAVSTGGGQWES 1336
Query: 1440 KDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIESNSQW 1619
+ A N + + +DW WG KA+P N + E S + ++ S W
Sbjct: 1337 NENGKATNSS------------DGNDWSGWGRKAEPDVTVTN--AQENTSNSAWDTTSSW 1382
Query: 1620 GRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVW---SSWD 1790
G K +T++ N + W S E DS+ +S T +S W S+W
Sbjct: 1383 GNK---ATNSSNDNDWSNCSTKEVERDSF------------TSMEKTPKSGGWDSASTWG 1427
Query: 1791 TAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNE----------- 1937
T S + + K+ + +S D + + S GW +
Sbjct: 1428 TKTKDDSFKRETAPKKSSQWSGLQKDKAETQDAFHKKAEMASKSGGWEDKAWSRGTSKTE 1487
Query: 1938 ----------------PVTRVNEPVSDWKERKGNDSSWTAKK-PEVESSSGWAD-----N 2051
V V+ + W G+ WT + +S +GW D +
Sbjct: 1488 DNWSSQVKDKAESFQVQVQEVSSKTNGW----GSTGGWTKNSGGDHQSEAGWNDGQASMD 1543
Query: 2052 SEKKA--WPAKSPD-------SGWKENTGNKS------------------SWTARKSDVE 2150
EK + W K+ S W T S SW +KS E
Sbjct: 1544 REKVSDRWDRKATQKLESHQTSSWGSPTVGDSKDSFPSKAVDHSDSVVNHSWDRQKSP-E 1602
Query: 2151 SPSGWQGNL--EQKAWSAKLPGIKECQGNKSSWTARKPXXXXXXXXXXXXXNKAWSAKSP 2324
+ G+ + +QK+ P + + N S W ++ N+ S S
Sbjct: 1603 ASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSDHGFDQVTNEQKS--SD 1660
Query: 2325 DSGWKRSEENESSWIAKKS-GGNTSGQCENVEKDAWSAKSLESGWNQKAENQENLTWIAK 2501
GW E+ + W +KS + S +N +W S + ++ T ++
Sbjct: 1661 TRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSSTQFSQ 1720
Query: 2502 -KPEVDSLPGGNE-----SEGQAWTPRATEAKSSPGWNE--SGGNPWVAKTPEIGSPTXX 2657
KP SL + S G ++E SS GW++ G W E
Sbjct: 1721 LKPPETSLGWEQQKSPEVSHGWGSNKESSEQTSSHGWDKKNQGSKGWGGNAGEW------ 1774
Query: 2658 XXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPAS-GRPEDRGGWR--------RAEAFTT 2810
KN RPP S G D R R + FT+
Sbjct: 1775 ------------------------KNRKNRPPKSPGMSNDDANLRALYTASGQRLDMFTS 1810
Query: 2811 EEEKILVDVEPIMNSIRKILRES--SDGSRVSPEDQKFITENVFEFHPDKQSKVSDQIDY 2984
EE+ IL D+EPIM SIRK++ +S +DG +S EDQ F+ ++VF FHPDK +K+ ID+
Sbjct: 1811 EEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDH 1870
Query: 2985 IMVDK 2999
MV +
Sbjct: 1871 FMVSR 1875
>ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
gi|659072503|ref|XP_008465867.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Cucumis melo]
gi|659072505|ref|XP_008465874.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Cucumis melo]
Length = 1964
Score = 584 bits (1505), Expect = e-163
Identities = 378/1086 (34%), Positives = 533/1086 (49%), Gaps = 87/1086 (8%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
CK +++N+ IDRRV+LYLNNC CG+K+C ENAA V++ L+ V LK A+D IEY +Q
Sbjct: 873 CKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDVAVDFMIEYNRQ- 931
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
P SG GLVGH+HL+ M LK LN +L +CQE +KK +++ R
Sbjct: 932 --PTPSGLGPGLVGHVHLNRMLLKELNINMTEVLRRCQETMSSFKKKKKKVAHALR---F 986
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDPR 542
+ SE C Q N + PCL F + D LE HI+ + + P+L +TI+KGDPR
Sbjct: 987 AISEHCAFHQWNGVESIDMPCLIFWHETR--DVHLERTAHILADIVFPLLSETIIKGDPR 1044
Query: 543 VDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLI 722
+ + ++IW PD+TSW +P R GELAL+V ++K A ++ GDAWR VLD CLPV+HLI
Sbjct: 1045 IKSASVIWISPDSTSWQKNPSRWQDGELALDVCLEKSALKQNGDAWRNVLDCCLPVLHLI 1104
Query: 723 DTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLI 902
DT RS+PY I+Q++EL GISCAFDQ +QRLSK + MVSKGV+ +HL+L+ N+MTCTGN+I
Sbjct: 1105 DTRRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMI 1164
Query: 903 GFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALG 1082
GFN+ G+KAL R+L +QVPFTEATL TP KCFE+AAEKCH D+L S+V+S SWGKHVA+G
Sbjct: 1165 GFNSGGYKALSRALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVG 1224
Query: 1083 TGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDE 1262
TG+ F+++W QK ++ C +D DVY+ L VR + ++ ACLG ++ED + + + E
Sbjct: 1225 TGSRFDILWDQK-ELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEVEDIMVEDEYGE 1283
Query: 1263 MPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNG-NKSNWENVSPTVVESDNWQAWGS 1439
+ LSPEP S EKP FED E C DN +S WE S W S
Sbjct: 1284 LTLSPEPFSTSEKPVFEDSAEFE-------HCLDNDPGESKWEKAPSLGAVSTGGGQWES 1336
Query: 1440 KDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIESNSQW 1619
NGN + + + +DW WG KA+P N + E S + ++ S W
Sbjct: 1337 -------NGNGK-----ATKSSDDNDWSGWGRKAEPDVTVTN--AQENTSNSAWDTTSSW 1382
Query: 1620 GRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVW---SSWD 1790
G K +T N + W S E DS+ +S T +S W S+W
Sbjct: 1383 GNK---ATITSNDNDWSNCSTKEVERDSF------------TSMEKTPKSGGWDTASTWG 1427
Query: 1791 TAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNE----------- 1937
T S + ++ N +SS D + + SSGW +
Sbjct: 1428 TKTKDDSFNGETAPEKSNQWSSLQKDKAETQDAFHKKAEMASKSSGWEDKAWSRGTSKTE 1487
Query: 1938 ----------------PVTRVNEPVSDW--------------------------KERKGN 1991
PV +V+ + W +R+
Sbjct: 1488 DNWSGQVKDKAESFQVPVQKVSSKTNGWGSTGGWTKNSGGDHQAEAGWNDGQASMDREEA 1547
Query: 1992 DSSWTAK---KPEVESSSGWADNS---EKKAWPAKSPDSGWKENTGNKSSWTARKSDVES 2153
W K K E +S W + K ++P+K+ D G ++ SW +KS S
Sbjct: 1548 SDRWDRKATQKLESHQTSSWGSPTVCDSKDSFPSKAVDHG---DSVVNHSWDRQKSPEAS 1604
Query: 2154 P----SGWQGNLEQKAWSAKLPGIKECQGNKSSWTARKPXXXXXXXXXXXXXNKAWSAKS 2321
WQ +QK+ P + N+S W ++ ++ S S
Sbjct: 1605 QGFGNDAWQ---QQKSQDVIKPSHANNESNRSGWGSQIESNEGSDHGFDQVTSEQKS--S 1659
Query: 2322 PDSGWKRSEENESSWIAKKS-GGNTSGQCENVEKDAWSAKSLESGWNQKAENQENLTWIA 2498
GW E+ + W +KS + S +N +W S + ++ T +
Sbjct: 1660 DTRGWDSQEKMDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEEFSRGSQDDSSTQFS 1719
Query: 2499 K-KPEVDSLPGGNE-----SEGQAWTPRATEAKSSPGWNE--SGGNPWVAKTPEIGSPTX 2654
+ KP SL + S G ++E SS GW++ G W E
Sbjct: 1720 QLKPPETSLGWEQQKSPEVSHGWGSHKESSEQTSSHGWDKKNQGSKGWGGNAGEW----- 1774
Query: 2655 XXXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPAS-GRPEDRGGWR--------RAEAFT 2807
KN RPP S G D R R + FT
Sbjct: 1775 -------------------------KNRKNRPPKSPGMSSDDANLRALYTASGQRLDMFT 1809
Query: 2808 TEEEKILVDVEPIMNSIRKILRES--SDGSRVSPEDQKFITENVFEFHPDKQSKVSDQID 2981
TEE+ IL D+EPIM SIRK++ +S +DG +S EDQ F+ ++VF FHPDK +K+ ID
Sbjct: 1810 TEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGID 1869
Query: 2982 YIMVDK 2999
+ MV +
Sbjct: 1870 HFMVSR 1875
>gb|KMT17107.1| hypothetical protein BVRB_2g041610 [Beta vulgaris subsp. vulgaris]
Length = 1973
Score = 583 bits (1504), Expect = e-163
Identities = 409/1163 (35%), Positives = 538/1163 (46%), Gaps = 164/1163 (14%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
C+AN++ND+ DRRV+LYLN+CCCG+K+C+ENA+ V+N L+ + L+ A++LSIEY++
Sbjct: 753 CRANFKNDMNDRRVILYLNDCCCGRKYCQENASCLVKNHLKKICLRDAAIELSIEYKRPK 812
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
P S +GLVGHIHL+ + LK IL KC+E RK+ F+R L
Sbjct: 813 LEPESVDIDTGLVGHIHLNAVLLKESGICMLDILQKCEEQVN-LLRKRKKYGYHFKRILL 871
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDPR 542
S SECC + N +E PCL+F ++ D LE HIM + ICPILLDTI+KGDPR
Sbjct: 872 SVSECCYFKYSNC-KWTEMPCLKF-FWQDLADSDLERTKHIMADVICPILLDTIIKGDPR 929
Query: 543 VDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLI 722
+ VNIIW P T+WV SP KGELA+EV ++K A R+ GDAWRIVLD CLPV HLI
Sbjct: 930 ISTVNIIWINPGTTTWVQSPCSNRKGELAVEVTLEKEAVRQSGDAWRIVLDCCLPVFHLI 989
Query: 723 DTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLI 902
D+ RSIPY I+QI++LFGISCAFDQ+VQRLS + MV+KGV+KEHL+L+ ++MTC GNLI
Sbjct: 990 DSQRSIPYAIKQIQDLFGISCAFDQAVQRLSTSVTMVTKGVLKEHLLLLASSMTCAGNLI 1049
Query: 903 GFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALG 1082
GFN SG KAL R+L VQVPFTEATL TP KCF+RA+EKCH D LGS+V S SWGK VA+G
Sbjct: 1050 GFNISGIKALCRALNVQVPFTEATLYTPRKCFQRASEKCHVDTLGSIVGSCSWGKRVAIG 1109
Query: 1083 TGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDE 1262
TGT F+++W K D G DVY+ L + E+ + CLG DIE+F D E
Sbjct: 1110 TGTKFDILWETK--AVGESDKGTDVYNFLHLLGGSNEEGIDTGCLGEDIENF--DEVYTE 1165
Query: 1263 MPLSPEPSSAHEKPTFEDYDSCEAWGWKGKP---CADNGNKSNWEN----VSPTVVESDN 1421
PLSPE +K FE++ + W G P A+ G S+WE+ S E
Sbjct: 1166 PPLSPE---QEDKAVFEEHLETDESSWDGLPTSGSAEGGGWSSWESKKDLPSSGSAEGGG 1222
Query: 1422 WQAWGSKDKT----SADNGNKSRWEKVSPTAVESDDWQPWG-------SKAKPS---ADS 1559
W +W SK + SA+ G S W D + WG S A+ S D+
Sbjct: 1223 WSSWESKKELPSSGSAEGGGWSSWGSKKDLPQPEDSSKSWGGAKLKEPSSARESDKETDN 1282
Query: 1560 GNKSSW-----EKASPAVIESNSQWG----------RKEKPSTDN---GNKSGWEKLSPM 1685
G W +K P +S+ WG R+ TDN G S W +
Sbjct: 1283 GGGGGWSSWGSKKDLPQTEDSSKSWGGAKLKEPSSARESDKETDNDSGGGWSSWGSKKDL 1342
Query: 1686 VAESDSWQGRGNRDQLAPGSSEMPTTRS----------------------AVWSSWDTAK 1799
DS + G P S+ P + WSSW K
Sbjct: 1343 PQPEDSSKSWGAAKLKEPSSAHEPDKETNNDIGWIKKGSKQDLTSGLVDGGGWSSWGVKK 1402
Query: 1800 VRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTRVNEPVSDWKE 1979
TQ NG+ D K KPN + VS NE S W
Sbjct: 1403 -----DLTQPESMANGW------DASKKNDEKPNGDKQVSWGKSNE---------STWGT 1442
Query: 1980 RKGNDSSW--TAKKPEVESSSGWADNSEKKA---WPAKSPDSGWK----ENTGNKS---- 2120
N +W T + ++ E KA W K DS WK EN G +S
Sbjct: 1443 SLKNAGNWNSTGVNQHADYQRSVSEKEESKAPSSW-GKPRDSSWKKNNNENEGGRSSSVL 1501
Query: 2121 -------SWTARKSDVESPSGWQGNLEQKAWSAKLPGIKEC-QGNKSSWTARKPXXXXXX 2276
SW + K D S W+ N E K C + + SW +K
Sbjct: 1502 NQEGGFRSWNSTKKDTNST--WKSN-EAMIVGGSSSEFKVCGEDSTQSWDTKK------- 1551
Query: 2277 XXXXXXXNKAWSAKSPDS----GW-----------------KRSEENESSWIAKKSGGNT 2393
+W S S GW K S E W +K G
Sbjct: 1552 --HDNRTKSSWGQSSNGSKNADGWSTGKASGDGVSSTWEQLKNSSEGAEGW-SKPGGEGG 1608
Query: 2394 SGQC-----ENVEKDAW----SAKSLESGWNQKAENQEN--LTWIAKKPEVDSLPG---- 2528
SG EN K W + K WN ++E W++KKPE S P
Sbjct: 1609 SGSWDSQKEENKTKSCWGKPKNNKDSAGHWNMNKASEEGDVSGWVSKKPEGKSQPSWGQS 1668
Query: 2529 ------------GNESEG--QAWTPRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXX 2666
G SEG W + E KS P W +S A G
Sbjct: 1669 NDGSKDAGGWSTGKASEGDVSGWVSKKPEGKSQPSWGQSNNGSKDAGGWSTGKAFGDGVS 1728
Query: 2667 XXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGR-----------------PEDRGG---- 2783
N G + P GR P+ GG
Sbjct: 1729 SSGGDKCQSSWGQSDNSSEGAGGWKKKQPEGGRGWGSSNSGEWRSRMNRPPKQHGGPNDD 1788
Query: 2784 ---------WRRAEAFTTEEEKILVDVEPIMNSIRKILRES--SDGSRVSPEDQKFITEN 2930
+R + F++EE+ +L +VE IM SIR+I+ +S +DG + +DQ ++ +N
Sbjct: 1789 STGVAFTATRKRMDLFSSEEQGVLSEVESIMQSIRRIMHQSGCNDGEPLPSDDQTYVIDN 1848
Query: 2931 VFEFHPDKQSKVSDQIDYIMVDK 2999
+ +HPDK++K+ +D+I V K
Sbjct: 1849 ILNYHPDKEAKIGAGVDFITVKK 1871
>ref|XP_010670484.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Beta vulgaris
subsp. vulgaris]
Length = 2089
Score = 583 bits (1504), Expect = e-163
Identities = 409/1163 (35%), Positives = 538/1163 (46%), Gaps = 164/1163 (14%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
C+AN++ND+ DRRV+LYLN+CCCG+K+C+ENA+ V+N L+ + L+ A++LSIEY++
Sbjct: 869 CRANFKNDMNDRRVILYLNDCCCGRKYCQENASCLVKNHLKKICLRDAAIELSIEYKRPK 928
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
P S +GLVGHIHL+ + LK IL KC+E RK+ F+R L
Sbjct: 929 LEPESVDIDTGLVGHIHLNAVLLKESGICMLDILQKCEEQVN-LLRKRKKYGYHFKRILL 987
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDPR 542
S SECC + N +E PCL+F ++ D LE HIM + ICPILLDTI+KGDPR
Sbjct: 988 SVSECCYFKYSNC-KWTEMPCLKF-FWQDLADSDLERTKHIMADVICPILLDTIIKGDPR 1045
Query: 543 VDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLI 722
+ VNIIW P T+WV SP KGELA+EV ++K A R+ GDAWRIVLD CLPV HLI
Sbjct: 1046 ISTVNIIWINPGTTTWVQSPCSNRKGELAVEVTLEKEAVRQSGDAWRIVLDCCLPVFHLI 1105
Query: 723 DTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLI 902
D+ RSIPY I+QI++LFGISCAFDQ+VQRLS + MV+KGV+KEHL+L+ ++MTC GNLI
Sbjct: 1106 DSQRSIPYAIKQIQDLFGISCAFDQAVQRLSTSVTMVTKGVLKEHLLLLASSMTCAGNLI 1165
Query: 903 GFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALG 1082
GFN SG KAL R+L VQVPFTEATL TP KCF+RA+EKCH D LGS+V S SWGK VA+G
Sbjct: 1166 GFNISGIKALCRALNVQVPFTEATLYTPRKCFQRASEKCHVDTLGSIVGSCSWGKRVAIG 1225
Query: 1083 TGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDE 1262
TGT F+++W K D G DVY+ L + E+ + CLG DIE+F D E
Sbjct: 1226 TGTKFDILWETK--AVGESDKGTDVYNFLHLLGGSNEEGIDTGCLGEDIENF--DEVYTE 1281
Query: 1263 MPLSPEPSSAHEKPTFEDYDSCEAWGWKGKP---CADNGNKSNWEN----VSPTVVESDN 1421
PLSPE +K FE++ + W G P A+ G S+WE+ S E
Sbjct: 1282 PPLSPE---QEDKAVFEEHLETDESSWDGLPTSGSAEGGGWSSWESKKDLPSSGSAEGGG 1338
Query: 1422 WQAWGSKDKT----SADNGNKSRWEKVSPTAVESDDWQPWG-------SKAKPS---ADS 1559
W +W SK + SA+ G S W D + WG S A+ S D+
Sbjct: 1339 WSSWESKKELPSSGSAEGGGWSSWGSKKDLPQPEDSSKSWGGAKLKEPSSARESDKETDN 1398
Query: 1560 GNKSSW-----EKASPAVIESNSQWG----------RKEKPSTDN---GNKSGWEKLSPM 1685
G W +K P +S+ WG R+ TDN G S W +
Sbjct: 1399 GGGGGWSSWGSKKDLPQTEDSSKSWGGAKLKEPSSARESDKETDNDSGGGWSSWGSKKDL 1458
Query: 1686 VAESDSWQGRGNRDQLAPGSSEMPTTRS----------------------AVWSSWDTAK 1799
DS + G P S+ P + WSSW K
Sbjct: 1459 PQPEDSSKSWGAAKLKEPSSAHEPDKETNNDIGWIKKGSKQDLTSGLVDGGGWSSWGVKK 1518
Query: 1800 VRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTRVNEPVSDWKE 1979
TQ NG+ D K KPN + VS NE S W
Sbjct: 1519 -----DLTQPESMANGW------DASKKNDEKPNGDKQVSWGKSNE---------STWGT 1558
Query: 1980 RKGNDSSW--TAKKPEVESSSGWADNSEKKA---WPAKSPDSGWK----ENTGNKS---- 2120
N +W T + ++ E KA W K DS WK EN G +S
Sbjct: 1559 SLKNAGNWNSTGVNQHADYQRSVSEKEESKAPSSW-GKPRDSSWKKNNNENEGGRSSSVL 1617
Query: 2121 -------SWTARKSDVESPSGWQGNLEQKAWSAKLPGIKEC-QGNKSSWTARKPXXXXXX 2276
SW + K D S W+ N E K C + + SW +K
Sbjct: 1618 NQEGGFRSWNSTKKDTNST--WKSN-EAMIVGGSSSEFKVCGEDSTQSWDTKK------- 1667
Query: 2277 XXXXXXXNKAWSAKSPDS----GW-----------------KRSEENESSWIAKKSGGNT 2393
+W S S GW K S E W +K G
Sbjct: 1668 --HDNRTKSSWGQSSNGSKNADGWSTGKASGDGVSSTWEQLKNSSEGAEGW-SKPGGEGG 1724
Query: 2394 SGQC-----ENVEKDAW----SAKSLESGWNQKAENQEN--LTWIAKKPEVDSLPG---- 2528
SG EN K W + K WN ++E W++KKPE S P
Sbjct: 1725 SGSWDSQKEENKTKSCWGKPKNNKDSAGHWNMNKASEEGDVSGWVSKKPEGKSQPSWGQS 1784
Query: 2529 ------------GNESEG--QAWTPRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXX 2666
G SEG W + E KS P W +S A G
Sbjct: 1785 NDGSKDAGGWSTGKASEGDVSGWVSKKPEGKSQPSWGQSNNGSKDAGGWSTGKAFGDGVS 1844
Query: 2667 XXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGR-----------------PEDRGG---- 2783
N G + P GR P+ GG
Sbjct: 1845 SSGGDKCQSSWGQSDNSSEGAGGWKKKQPEGGRGWGSSNSGEWRSRMNRPPKQHGGPNDD 1904
Query: 2784 ---------WRRAEAFTTEEEKILVDVEPIMNSIRKILRES--SDGSRVSPEDQKFITEN 2930
+R + F++EE+ +L +VE IM SIR+I+ +S +DG + +DQ ++ +N
Sbjct: 1905 STGVAFTATRKRMDLFSSEEQGVLSEVESIMQSIRRIMHQSGCNDGEPLPSDDQTYVIDN 1964
Query: 2931 VFEFHPDKQSKVSDQIDYIMVDK 2999
+ +HPDK++K+ +D+I V K
Sbjct: 1965 ILNYHPDKEAKIGAGVDFITVKK 1987
>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
Length = 2017
Score = 583 bits (1504), Expect = e-163
Identities = 392/1111 (35%), Positives = 545/1111 (49%), Gaps = 114/1111 (10%)
Frame = +3
Query: 9 ANYQNDLIDRRVVLYLNNCCCGKKFCRENAA---------LAVQNCLRSVMLK------- 140
+ Y+ND+ DR+V+L+LN+C C KKFC+E AA + +++C + ++
Sbjct: 873 SRYKNDMKDRKVILFLNDCSCAKKFCKEKAAIAVQGCLRRITLEDCATDICIEDGNWAAP 932
Query: 141 --------------------------------------HCALDLSI-EYQKQIGLPNSSG 203
H ++ + YQKQIGL +S
Sbjct: 933 AGFQHPVPPPQCKILPVPIPIPAHGSVKFPPVPIPAPEHLKYNIHVVRYQKQIGLDGTSE 992
Query: 204 TASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCG 383
A LVGHIHLD L+ +N +T+ IL KCQEV+ + +KKGHLSN+F+ S+ +C
Sbjct: 993 AAPALVGHIHLDRAHLERINISTEDILQKCQEVSGKYGKKKGHLSNLFKNITFSTCDCLF 1052
Query: 384 SQQPNDGNLSEFPCLQFSYFAGA-VDETLEHGMHIMINTICPILLDTIVKGDPRVDAVNI 560
+Q+ DG L + PCLQF V E++E + ++ +++C +LL+TI+KGDPR+ I
Sbjct: 1053 TQKLVDGKLPKLPCLQFFVSDNMIVSESVERAVSVLADSLCGVLLNTIIKGDPRIQEAKI 1112
Query: 561 IWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSI 740
+W G DATSWV + + KGE A+E++V++ A GDAWR +DAC+PV++LID RSI
Sbjct: 1113 VWVGSDATSWVKNTQKASKGEPAVEIIVEEEEALHIGDAWRTTMDACIPVLNLIDIRRSI 1172
Query: 741 PYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSG 920
PYGIQQ++EL GISCAFDQ VQRLS +RMV+K V+K+HLVLV N+MT TGNL GFN +G
Sbjct: 1173 PYGIQQVRELLGISCAFDQVVQRLSTTVRMVAKDVLKDHLVLVANSMTFTGNLNGFNNAG 1232
Query: 921 FKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFE 1100
+KA FRSLKVQVPFTE+TL+TPMKCFE+AAEKCH+D+LG VVSS SWGKH A GTG+ F+
Sbjct: 1233 YKATFRSLKVQVPFTESTLITPMKCFEKAAEKCHSDSLGCVVSSCSWGKHAASGTGSSFQ 1292
Query: 1101 VIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDEMPLSPE 1280
++W + Q+ N++ G +YD LA VR +EK D D+L + ++ LSPE
Sbjct: 1293 ILWNE-SQLKSNKEYGDGLYDYLALVRTDEEK---ARYTFFDDVDYLAEENEADVCLSPE 1348
Query: 1281 PSSAHEKPTFEDYDSCEAWGWKGKPCADNGNKSN--WENVSPTVVESDNWQAW------G 1436
+P F+ D+ E + DNG +N WE +SD W W
Sbjct: 1349 LDGTIGQPIFD--DNLEEQDVQNNSSWDNGTTTNASWEQNGSAGNDSDKWGGWNDAAAGA 1406
Query: 1437 SKDKTSADNGNKSRWEKVSPTAVESDDWQPWGS-----KAKPSADSGNKSSWEKASP-AV 1598
T N S W+ + S DW WG+ K K S + +W P
Sbjct: 1407 DTGVTKPANQGNSCWDVPATVEKSSSDWGGWGTEKAKEKEKISEEPAQHDAWSVQGPKRA 1466
Query: 1599 IESNSQWGRKEKPSTD----------NGNKSGWEKLSPMVAESDSWQGRGNRDQL----- 1733
+ + W ++ D N WEK + A+ SW GRGN +
Sbjct: 1467 TDGGASWKKQSSTQNDGNSWKENKGRGSNGGSWEKDN---AQKGSW-GRGNDEAENNNDV 1522
Query: 1734 -----------APGSSEMP---TTRSAVWSSWDTAKVRHSNQSTQSRK--EFNGFSSFDN 1865
A S+E T S ++W A V N S+ +++ ++G+ S
Sbjct: 1523 QNKSWETVAADAHASTEKSWGNVTASPSDNAWSAAPVSQGNGSSDTKQSDSWDGWKSAGV 1582
Query: 1866 DD-VQKSPIWKPNKPEVVSSSGWN-EPVTRVNEPVSDWKERKGNDSSWTAKKPEVESSSG 2039
D + K N P S S WN PV++ NE SD K+ SW K +
Sbjct: 1583 DKAINKDKESLGNVPASPSFSAWNASPVSQGNER-SDAKQ----SDSWDGWKSAGVDKAI 1637
Query: 2040 WADNSEKKAWPAKSPDSGWKENTGNKSSWTARKSDVESPSGWQGNLEQKAWSAKLPGIKE 2219
D PA S W ++ + + D + W G W K G+ +
Sbjct: 1638 NKDKESLGNVPASPSFSAWNAAPVSQGN---ERLDAKQSDSWDG------W--KSAGVDD 1686
Query: 2220 CQGNKSSWTARKPXXXXXXXXXXXXXNKAWSAKSPDSGWKRSEENES-SWIAKKSGGNTS 2396
+K SW + AW+A G + S+ +S SW KS G +
Sbjct: 1687 SVKDKESW----------GNVPASPSDSAWNAAPVSQGNESSDAKQSDSWDGWKSAGVDA 1736
Query: 2397 GQCENVEKDAWS---AKSLESGWNQKAENQENLTWIAKKPEVDSLPGGNESEGQAWTPRA 2567
N +K++W A +S WN +Q + W + + NES + W
Sbjct: 1737 S--TNKDKESWGNVPASPSDSAWNAAPVSQGDDVWNSAE--------ANESRNKDW---- 1782
Query: 2568 TEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPR 2747
S GW GGN W RG +NN R
Sbjct: 1783 ----KSDGWGARGGN-W----------------------------------RGQRNNPGR 1803
Query: 2748 PPAS-------GRPEDRGGWRRAEAFTTEEEKILVDVEPIMNSIRKILRESSDGSRVSPE 2906
PP RP++RG RR T EEEKIL ++EP + SIRKI RES D ++SPE
Sbjct: 1804 PPRKPDGRGLPRRPDERGPPRRHFDLTAEEEKILGEIEPTVLSIRKIFRESIDSIKLSPE 1863
Query: 2907 DQKFITENVFEFHPDKQSKVSDQIDYIMVDK 2999
D+KFI ENV E HP+KQSKVS +ID+IMVDK
Sbjct: 1864 DEKFIKENVLEHHPEKQSKVSGEIDHIMVDK 1894
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 583 bits (1503), Expect = e-163
Identities = 376/1048 (35%), Positives = 530/1048 (50%), Gaps = 49/1048 (4%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
C+ ++ ND IDRRV+LYLN+C CG+K+C+E AA V+N L+ V LK A++ IEY+K
Sbjct: 867 CRVSFNNDPIDRRVILYLNDCGCGRKYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKK-- 924
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKG--HLSNIFRRT 356
P GLVGHIHL+ + L+ L + IL KCQE + +KK + F+ T
Sbjct: 925 --PEIISDDEGLVGHIHLNKILLEDLRISMHDILPKCQETLKSFCKKKKMKKVVQFFKNT 982
Query: 357 FLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGD 536
LS SECC QQ S PCL F GA D L+ ++ N I P+LL+TI+KGD
Sbjct: 983 SLSVSECCSFQQSCADKRSNMPCLMF-VLRGASDSYLDKLSGVLANMIYPVLLETIIKGD 1041
Query: 537 PRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMH 716
PR+ + NIIW PD T+W+ +P + KGELAL+VV++K ++ GDAWR VLD+CLPV H
Sbjct: 1042 PRIYSANIIWISPDTTAWIRNPSKNRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFH 1101
Query: 717 LIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGN 896
LIDT RS+PY I+Q++EL G+SCAF+Q+VQRLS + MV+KGV+KEHL+L+ N+MTC G+
Sbjct: 1102 LIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGD 1161
Query: 897 LIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVA 1076
L+GFN+ G+KAL RSL VQVPFTEATL TP KCFE+AAEKCHTD L SVV++ SWGKHVA
Sbjct: 1162 LVGFNSGGYKALSRSLNVQVPFTEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVA 1221
Query: 1077 LGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREP---QEKDLPGACLGSDIEDFLDD 1247
+GTG+ F+++W Q + N+D G DVYD L VR +E D CLG +++ D+
Sbjct: 1222 VGTGSRFDLLW-QTENEEFNQDDGVDVYDFLHMVRSSTGIEESDT--GCLGEEVDGLEDE 1278
Query: 1248 FQNDEMPLSPEPSSAHEKPTFEDYDSCEAW--------GWKGKPCADNGNKSNWENVSPT 1403
F + LSPE + +KP FED ++W W + ++ WE + +
Sbjct: 1279 F---DWSLSPEHNLCSDKPVFEDLVEDQSWLENKQENANWDSEADCRKSSEDKWEKLGTS 1335
Query: 1404 VVE-SDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWE 1580
+ + S W+ G+ K+S D K+ P+ WG++A S +K WE
Sbjct: 1336 LEKPSSGWRTEGAWGKSSDDKLEKAGSPSRKPSG--------WGTEASWGESSCDK--WE 1385
Query: 1581 KASPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSW-------QGRGNRDQLAP 1739
+S S+WG + G+K E +SP S W + G+R +
Sbjct: 1386 NVGSPAAKSFSEWGTEASWGKSFGDKP--ENVSPAAKTSSGWGSEASWGKSSGDRQENVG 1443
Query: 1740 GSSEMPTTRSAVWSSWDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVS 1919
GS+ P + +SW G SS D + ++ + KP
Sbjct: 1444 GSASKPLSGWGAKASW-------------------GKSSEDKLEEVETTVAKP------- 1477
Query: 1920 SSGWNEPVTRVNEPVSDWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGW- 2096
SS W G ++SW K EV EK A PA++P SGW
Sbjct: 1478 SSAW------------------GTEASWD-KSSEV--------TLEKVAAPAENPLSGWG 1510
Query: 2097 --KENTGNKSSWTARKSDVESPSGW--QGNLEQKAWSAKLPGIKECQGNKSSWTARKPXX 2264
+++G S W+ K + + W G+ E W K +SW +
Sbjct: 1511 TEAQDSGKSSDWSEWKDHANATASWGRNGSEENSGWDTK-----------ASWKTKALDK 1559
Query: 2265 XXXXXXXXXXXNKAWSAKSPDS--GWKRSEE---NESSWIAKKSGGN------TSGQCEN 2411
+ W A+ S GW+ S + NE S + + G N T C
Sbjct: 1560 LDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVPDAKGTDDSCWG 1619
Query: 2412 VEKDAWSAKSLE-SGWNQK--AENQENLTWIAKKPEVDSLPGGNESEGQAWTPRATEA-K 2579
+K +AK + S W ++ EN+ + ++ GG+E+E Q W E K
Sbjct: 1620 KQKLTENAKGTDDSSWGKQKHTENESPQPASSNAWDLPDATGGSETEMQVWGQSRKEPFK 1679
Query: 2580 SSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPAS 2759
+ GW S G W +G KN PR P
Sbjct: 1680 KNRGWASSSGE-W----------------------------------KGKKNRPPRSPGV 1704
Query: 2760 GRPEDRGGW------RRAEAFTTEEEKILVDVEPIMNSIRKILRES--SDGSRVSPEDQK 2915
+ +R + FT+EE+ IL VEPIM SIR+I+ +S +DG R+S +D+
Sbjct: 1705 VNDDSTVNAMYTVTRQRLDMFTSEEQDILSHVEPIMRSIRRIMHQSGYNDGDRLSADDKS 1764
Query: 2916 FITENVFEFHPDKQSKVSDQIDYIMVDK 2999
FI +NVF +HPDK K+ ID+ VDK
Sbjct: 1765 FIFDNVFNYHPDKAMKMGAGIDHFKVDK 1792
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 582 bits (1499), Expect = e-163
Identities = 381/1022 (37%), Positives = 537/1022 (52%), Gaps = 23/1022 (2%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
C+ N++NDLIDRRV+LYLN+C CG+K+CRENAA V+N L+ LK A++ IEY KQ
Sbjct: 928 CQVNFKNDLIDRRVILYLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQH 987
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
+ SS +GLVGHIHL+ + L+ LN + + KC+E RKK ++ F++ L
Sbjct: 988 AVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSF-RKKKNVGPFFKKIIL 1046
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDPR 542
S ECC Q S+ PCL F ++ G D+ LE +HI+ + ICP+LL TI+KGD R
Sbjct: 1047 SFRECCTFQHSCQSKGSDMPCLLF-FWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSR 1105
Query: 543 VDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLI 722
V VNIIW PD T+W+ +P ++ KGELAL++V++K A +++GDAWRIVLDACLPV+HLI
Sbjct: 1106 VCTVNIIWISPDTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLI 1165
Query: 723 DTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLI 902
DT RSIPY I+Q++EL GISCAFDQ+VQRLSK + MV+KGV+KEHL+L+ N+MTC GNLI
Sbjct: 1166 DTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLI 1225
Query: 903 GFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALG 1082
GFN+ G+KAL R+L +QVPFTEATL TP KCFE+A+EKCHTD+L S+V+S SWGKHV +G
Sbjct: 1226 GFNSGGYKALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVG 1285
Query: 1083 TGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE-PQEKDLPGACLGSDIEDFLDDFQND 1259
TG+ F+V+W K+ P +D G D+Y L VR K+ ACLG+++ED + + +N
Sbjct: 1286 TGSRFDVLWDTKEIGPA-QDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENL 1344
Query: 1260 EMPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNGNKSNWENVSPT--VVESDNWQAW 1433
E+ +SPE SS EKP FED + W+ G+ + +N T ++ W +W
Sbjct: 1345 ELGMSPEHSSNFEKPVFEDSAEFQN-TWENHVPGSGGDWAVNQNKETTASTLKPSAWSSW 1403
Query: 1434 GSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGS-KAKPSA----------DSGNKSSWE 1580
G+ DK + + +R S + DD WG+ KA+ +A SG ++
Sbjct: 1404 GT-DKVTMKDTFSTREPDESSRSAGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFR 1462
Query: 1581 KASPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPT 1760
P ++S WG+K D +K+GW K G +M
Sbjct: 1463 DGRPQF--ASSAWGKK----IDEADKTGWNK--------------------NDGKPQMDK 1496
Query: 1761 TRSAVWSSWDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEP 1940
R + WD KV Q ++ + G SS D WK N+ ++ E
Sbjct: 1497 LRESY--DWD-CKVA---QEKTTQSTYGGISSTTGD-------WKKNELQM-------EV 1536
Query: 1941 VTRVNEPVSDWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKS 2120
V PV N+ SW A PE + + GW +TG
Sbjct: 1537 VQHDESPV--------NEHSWDANLPEDPLAQA-------------TTSVGWDSSTG--K 1573
Query: 2121 SWTARKSDVESPSGWQGNLEQKAWSAKLPGIKECQGNKSSWTARKPXXXXXXXXXXXXXN 2300
WT RK ++SPS Q + K+WS+ +KE Q N+ + T
Sbjct: 1574 DWTKRK--LQSPSEQQRDPAIKSWSSSHNVMKE-QSNQPAST------------------ 1612
Query: 2301 KAWSAKSPDSGWKRSEENESSWIAKKSGGNTSGQCENVEKDAWSAKSLESGWNQKAENQE 2480
W + GW EE +S W + S V+ D GW N++
Sbjct: 1613 HGWDSPGA-KGWNDVEE-QSQWNQRGSA---------VKND---QSESSHGWG--PSNEQ 1656
Query: 2481 NLTWIAKKPEVDSLPGGNESEGQAWTPRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXX 2660
N ++ + G+ESE Q+ + + KS P G W + E +
Sbjct: 1657 NQLPSSQGWGSPNAGAGHESETQSQWGQPSGKKSRP----EGSRGWGSNNTEWKN----- 1707
Query: 2661 XXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPED--RGG-----WRRAEAFTTEEE 2819
K N P P +D GG +R + FT+EE+
Sbjct: 1708 -----------------------KKNRPNKPQGPLNDDYSAGGIFTATRQRVDIFTSEEQ 1744
Query: 2820 KILVDVEPIMNSIRKILRES--SDGSRVSPEDQKFITENVFEFHPDKQSKVSDQIDYIMV 2993
IL+DVEPIM SIR+I+ ++ +DG +S +DQ +I + VF HPDK K+ IDY+MV
Sbjct: 1745 DILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMV 1804
Query: 2994 DK 2999
+
Sbjct: 1805 SR 1806
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
gi|731435545|ref|XP_010645605.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Vitis vinifera]
Length = 1830
Score = 582 bits (1499), Expect = e-163
Identities = 381/1022 (37%), Positives = 537/1022 (52%), Gaps = 23/1022 (2%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
C+ N++NDLIDRRV+LYLN+C CG+K+CRENAA V+N L+ LK A++ IEY KQ
Sbjct: 868 CQVNFKNDLIDRRVILYLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQH 927
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFL 362
+ SS +GLVGHIHL+ + L+ LN + + KC+E RKK ++ F++ L
Sbjct: 928 AVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSF-RKKKNVGPFFKKIIL 986
Query: 363 SSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDPR 542
S ECC Q S+ PCL F ++ G D+ LE +HI+ + ICP+LL TI+KGD R
Sbjct: 987 SFRECCTFQHSCQSKGSDMPCLLF-FWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSR 1045
Query: 543 VDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLI 722
V VNIIW PD T+W+ +P ++ KGELAL++V++K A +++GDAWRIVLDACLPV+HLI
Sbjct: 1046 VCTVNIIWISPDTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLI 1105
Query: 723 DTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLI 902
DT RSIPY I+Q++EL GISCAFDQ+VQRLSK + MV+KGV+KEHL+L+ N+MTC GNLI
Sbjct: 1106 DTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLI 1165
Query: 903 GFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALG 1082
GFN+ G+KAL R+L +QVPFTEATL TP KCFE+A+EKCHTD+L S+V+S SWGKHV +G
Sbjct: 1166 GFNSGGYKALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVG 1225
Query: 1083 TGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE-PQEKDLPGACLGSDIEDFLDDFQND 1259
TG+ F+V+W K+ P +D G D+Y L VR K+ ACLG+++ED + + +N
Sbjct: 1226 TGSRFDVLWDTKEIGPA-QDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENL 1284
Query: 1260 EMPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNGNKSNWENVSPT--VVESDNWQAW 1433
E+ +SPE SS EKP FED + W+ G+ + +N T ++ W +W
Sbjct: 1285 ELGMSPEHSSNFEKPVFEDSAEFQN-TWENHVPGSGGDWAVNQNKETTASTLKPSAWSSW 1343
Query: 1434 GSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGS-KAKPSA----------DSGNKSSWE 1580
G+ DK + + +R S + DD WG+ KA+ +A SG ++
Sbjct: 1344 GT-DKVTMKDTFSTREPDESSRSAGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFR 1402
Query: 1581 KASPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPT 1760
P ++S WG+K D +K+GW K G +M
Sbjct: 1403 DGRPQF--ASSAWGKK----IDEADKTGWNK--------------------NDGKPQMDK 1436
Query: 1761 TRSAVWSSWDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEP 1940
R + WD KV Q ++ + G SS D WK N+ ++ E
Sbjct: 1437 LRESY--DWD-CKVA---QEKTTQSTYGGISSTTGD-------WKKNELQM-------EV 1476
Query: 1941 VTRVNEPVSDWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKS 2120
V PV N+ SW A PE + + GW +TG
Sbjct: 1477 VQHDESPV--------NEHSWDANLPEDPLAQA-------------TTSVGWDSSTG--K 1513
Query: 2121 SWTARKSDVESPSGWQGNLEQKAWSAKLPGIKECQGNKSSWTARKPXXXXXXXXXXXXXN 2300
WT RK ++SPS Q + K+WS+ +KE Q N+ + T
Sbjct: 1514 DWTKRK--LQSPSEQQRDPAIKSWSSSHNVMKE-QSNQPAST------------------ 1552
Query: 2301 KAWSAKSPDSGWKRSEENESSWIAKKSGGNTSGQCENVEKDAWSAKSLESGWNQKAENQE 2480
W + GW EE +S W + S V+ D GW N++
Sbjct: 1553 HGWDSPGA-KGWNDVEE-QSQWNQRGSA---------VKND---QSESSHGWG--PSNEQ 1596
Query: 2481 NLTWIAKKPEVDSLPGGNESEGQAWTPRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXX 2660
N ++ + G+ESE Q+ + + KS P G W + E +
Sbjct: 1597 NQLPSSQGWGSPNAGAGHESETQSQWGQPSGKKSRP----EGSRGWGSNNTEWKN----- 1647
Query: 2661 XXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPED--RGG-----WRRAEAFTTEEE 2819
K N P P +D GG +R + FT+EE+
Sbjct: 1648 -----------------------KKNRPNKPQGPLNDDYSAGGIFTATRQRVDIFTSEEQ 1684
Query: 2820 KILVDVEPIMNSIRKILRES--SDGSRVSPEDQKFITENVFEFHPDKQSKVSDQIDYIMV 2993
IL+DVEPIM SIR+I+ ++ +DG +S +DQ +I + VF HPDK K+ IDY+MV
Sbjct: 1685 DILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMV 1744
Query: 2994 DK 2999
+
Sbjct: 1745 SR 1746
>ref|XP_011469364.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1 [Fragaria vesca subsp. vesca]
Length = 2012
Score = 580 bits (1496), Expect = e-162
Identities = 385/1100 (35%), Positives = 554/1100 (50%), Gaps = 101/1100 (9%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
CK N++N+LIDRRVVLYLN+C CG+K+CRE+AA V+N L+ V LK A++ IEYQK+
Sbjct: 871 CKVNFKNELIDRRVVLYLNDCGCGRKYCREHAAYLVKNRLKKVSLKDTAVEFMIEYQKER 930
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKG----HLSNIFR 350
S SGLVGH+HL+ M L+ LN IL KC+E RKK ++ IF+
Sbjct: 931 AA-GSMEIDSGLVGHVHLNEMLLRELNLGMSEILQKCEETINSFRRKKVGKKMNIGEIFK 989
Query: 351 RTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVK 530
RT LS SECC Q + N S PCL F ++ + LE ++ + ICP+LL T++K
Sbjct: 990 RTILSYSECCSFHQSSADNRSGSPCLMF-FYQDFNNSELEAISQMLADFICPVLLKTVIK 1048
Query: 531 GDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPV 710
GDPR+ + NIIW ++T+W+ SP ++LKGELAL+VV++K ++ GDAWRI LD CLPV
Sbjct: 1049 GDPRISSANIIWINSESTTWIRSPNKSLKGELALDVVLEKSVVKQSGDAWRIALDCCLPV 1108
Query: 711 MHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCT 890
+HLIDT RSIPY I+Q++EL G+SCAFDQ+VQRL+K + MV+KGV+KEHL+L+ N+MTC
Sbjct: 1109 LHLIDTRRSIPYAIKQVQELLGVSCAFDQAVQRLAKAVAMVAKGVLKEHLILLANSMTCA 1168
Query: 891 GNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKH 1070
GN +GFN G+KAL R+L +QVPFTEATL TP KCFERAAEKCH D+L S+V+S SWGKH
Sbjct: 1169 GNFVGFNPGGYKALSRALNIQVPFTEATLFTPKKCFERAAEKCHMDSLSSIVASCSWGKH 1228
Query: 1071 VALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDF 1250
VA+GTG+ FE++W K+ NE G DV++ L V ++L A LG++I+D + D+
Sbjct: 1229 VAVGTGSRFEILWDTKEG-GLNEVGGVDVFNFLHMVNAANGEELTTAALGTEIDDLVPDY 1287
Query: 1251 QNDEMPLSPEPSSAHEKPTFEDYDSCEAWGWKGKPCADNGNKSNWENVSPTVVESDNWQA 1430
+N ++ LSPE +S+ +KP FED ++ P KS+W+++ +W A
Sbjct: 1288 ENGDVSLSPEHNSSSDKPVFEDIVEFPD-NFENVP-----GKSSWDSIYTASTGGKDWGA 1341
Query: 1431 --WGSKDKTSADN--GNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASPAV 1598
G++D SA+ + S W +P DD PWG+ + D+ S+W
Sbjct: 1342 VKIGTQDGISAETQADSTSAWGIKTP---REDDTSPWGTAKTATEDA--PSAW-GTKTVK 1395
Query: 1599 IESNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVW 1778
++ S WG K + +S W ++ S G + AP + + T R
Sbjct: 1396 EDAPSAWGIK---TAREDARSPWGTAKTATEDASSAVGTKTVKEDAPSAWGIKTAREDAP 1452
Query: 1779 SSWDTAKVRH----SNQSTQSRKEFNGFSSFDNDDVQK---SP-------------IWKP 1898
S W TAK S T++ KE + S++ V++ SP W
Sbjct: 1453 SPWGTAKTATGDALSAWGTKTLKE-DAPSAWGTKTVREDAPSPWGTAKRATEDAPAAWGA 1511
Query: 1899 NKPEVVSSSGWNEPVTRVNEPVSDW---KERKGNDSSWTAKKPEVESSSGWADNSEKK-- 2063
+ W T + S W +K S W K ++++ W N+EKK
Sbjct: 1512 KSATEDAPPPWGTAKTAAEDAPSAWGVKAVKKDASSPWETKTATEDATTAWGRNNEKKHV 1571
Query: 2064 --------AWPAKSPDSGW-KENTGN-KSSWTARKSDVESPSGWQGNLEQKAWSAKLPGI 2213
+ + SGW EN N +S+W ++ ES +GW G K S +
Sbjct: 1572 LTAEVLEDSKAREDATSGWGTENAENAQSTW---RTSTESENGWSGRGGSKVESTDVQSQ 1628
Query: 2214 KECQGNKSSWT-----ARKPXXXXXXXXXXXXXNKAWSAKSPDSGWKRSEENESSWIAKK 2378
K + N W RKP S K D ++ E SW K
Sbjct: 1629 KAVE-NPKGWNDFSAGVRKP----QTENAGSGWGMKGSEKKGDIELEQDESTRHSWKQKS 1683
Query: 2379 SGGNTSGQCE-----NVEKDAW----SAKSLESGW-NQKAENQENLTWIAKKP------- 2507
+ ++ G E + K W SA+ W QK+ + W +KP
Sbjct: 1684 ADASSQGAWERQKSPDTSKGTWEQPKSAEMSHGAWGQQKSPDVSQGVWGLEKPASTNSQG 1743
Query: 2508 -----EVDSLPGGNESEGQA-------WTPRATEAKSSPGWNESGGNPWVAKTPEIGSPT 2651
+ +P GN + + W + + S W + P P +
Sbjct: 1744 SWGQQKSPEIPQGNWGQQTSPDISQGTWGQQKSPEMSQGSWGQQ--KPSDTSQPATVNQW 1801
Query: 2652 XXXXXXXXXXXXXXXXXXXFNDRR--------GP-----KNNSPRPPAS-GRPEDRGG-- 2783
N R+ GP K + RP S G D
Sbjct: 1802 DSQSEAAVERHQQWGHNGDSNKRKRFEGGRSWGPNAGEWKGKNSRPAKSPGMVNDDSSVA 1861
Query: 2784 ------WRRAEAFTTEEEKILVDVEPIMNSIRKILRES--SDGSRVSPEDQKFITENVFE 2939
+R + FT+EE+ +L +EP M SIR+I+ +S +DG ++S ED FI + VF
Sbjct: 1862 AIYTATRQRLDIFTSEEQDVLSHIEPTMLSIRRIMHQSGYNDGDQLSAEDHSFILDKVFN 1921
Query: 2940 FHPDKQSKVSDQIDYIMVDK 2999
FHP+K++K+ IDY VD+
Sbjct: 1922 FHPEKEAKMGSGIDYFTVDR 1941
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 575 bits (1481), Expect = e-160
Identities = 372/1042 (35%), Positives = 526/1042 (50%), Gaps = 43/1042 (4%)
Frame = +3
Query: 3 CKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQI 182
C+ ++ ND IDRRV+LYLN+C CG+K+C+E AA V+N L+ V LK A++ IEY+K
Sbjct: 868 CRVSFNNDPIDRRVILYLNDCGCGRKYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKK-- 925
Query: 183 GLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKG--HLSNIFRRT 356
P GLVGHIHL+ + L+ L + IL KCQE + +KK + F+ T
Sbjct: 926 --PEIISDDEGLVGHIHLNKILLEDLRISMHDILPKCQETLKSFCKKKKMKKVVQFFKNT 983
Query: 357 FLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGD 536
LS SECC QQ S PCL F GA D L+ ++ N I P+LL+TI+KGD
Sbjct: 984 SLSISECCSFQQSCADKRSNMPCLMF-VLRGASDSYLDKLSGVLANMIYPVLLETIIKGD 1042
Query: 537 PRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMH 716
PR+ + NIIW PD T+W+ +P + KGELAL+VV++K ++ GDAWR VLD+CLPV H
Sbjct: 1043 PRICSANIIWISPDTTAWIRNPSKNRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFH 1102
Query: 717 LIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGN 896
LIDT RS+PY I+Q++EL G+SCAF+Q+VQRLS + MV+KGV+KEHL+L+ N+MTC G+
Sbjct: 1103 LIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGD 1162
Query: 897 LIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVA 1076
L+GFN+ G+KAL RSL VQVPFTEATL P KCFE+AAEK HTD L SVV++ SWGKHVA
Sbjct: 1163 LVGFNSGGYKALSRSLNVQVPFTEATLFMPRKCFEKAAEKRHTDNLSSVVAACSWGKHVA 1222
Query: 1077 LGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQE-KDLPGACLGSDIEDFLDDFQ 1253
+GTG+ F+++W Q + N+D G DVYD L VR ++L CLG +++ D+F
Sbjct: 1223 VGTGSRFDLLW-QTENEEFNQDDGVDVYDFLHMVRSSTGIEELDTGCLGEEVDGLEDEF- 1280
Query: 1254 NDEMPLSPEPSSAHEKPTFEDYDSCEAW--------GWKGKPCADNGNKSNWENVSPTVV 1409
+ LSPE + +KP FED ++W W + ++ WE + ++
Sbjct: 1281 --DWSLSPEHNLCSDKPIFEDLVEDQSWLENKQENENWDSEADCRKSSEDKWEKLGTSLE 1338
Query: 1410 E-SDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKA 1586
+ S W+ G+ K+S D K+ P+ WG++A S +K WE
Sbjct: 1339 KPSSGWRTEGAWGKSSDDKLEKAGSPSRKPSG--------WGTEASWGESSSDK--WENV 1388
Query: 1587 SPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTR 1766
+S S+WG + G+K SP S W + + +PG + R
Sbjct: 1389 GSPAAKSFSEWGTEASWGKSFGDKPE-NVRSPAAKTSSGWGSEASWGK-SPGDRQENVGR 1446
Query: 1767 SA--VWSSWDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEP 1940
SA S W K G SS D + ++ + KP SS W
Sbjct: 1447 SASKPLSGW-------------GAKASWGKSSEDKLEEVETTVAKP-------SSAW--- 1483
Query: 1941 VTRVNEPVSDWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGW---KENTG 2111
G ++SW K EV EK A PA++P SGW +++G
Sbjct: 1484 ---------------GTEASWD-KSSEV--------TLEKVAAPAENPLSGWGTEAQDSG 1519
Query: 2112 NKSSWTARKSDVESPSGW--QGNLEQKAWSAKLPGIKECQGNKSSWTARKPXXXXXXXXX 2285
S W+ K + + W G+ E W K+SW +
Sbjct: 1520 KSSDWSEWKDHANATASWGRNGSEENSGWD-----------TKASWNTKALDKLDDVGSA 1568
Query: 2286 XXXXNKAWSAKSPDS--GWKRSEE---NESSWIAKKSGGNTSGQCENVEKDAWSAKSL-- 2444
+ W A+ S GW+ S + NE S I + GG + + +W + L
Sbjct: 1569 VENSSSVWGAREDFSTKGWEDSSKPSANEKS-IVHQIGGWNVPDAKGTDDSSWGKQKLTE 1627
Query: 2445 ------ESGWNQK--AENQENLTWIAKKPEVDSLPGGNESEGQAW-TPRATEAKSSPGWN 2597
+S W ++ EN+ + + ++ GG+E+E Q W R K + GW
Sbjct: 1628 NAKGTDDSSWGKQKHTENESSQPASSNAWDLPDATGGSETEMQVWGQSRKEPFKKNRGWA 1687
Query: 2598 ESGGNPWVAKTPEIGSPTXXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDR 2777
S G W +G KN PR P +
Sbjct: 1688 SSSGE-W----------------------------------KGKKNRPPRSPGVVNDDST 1712
Query: 2778 GG------WRRAEAFTTEEEKILVDVEPIMNSIRKILRES--SDGSRVSPEDQKFITENV 2933
+R + FT+EE+ IL DVEPIM SIR+I+ +S +DG R+S +D+ FI +NV
Sbjct: 1713 VNAMYTVTRQRLDMFTSEEQDILSDVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNV 1772
Query: 2934 FEFHPDKQSKVSDQIDYIMVDK 2999
F +HPDK K+ ID+ VDK
Sbjct: 1773 FNYHPDKAMKMGAGIDHFKVDK 1794