BLASTX nr result

ID: Ophiopogon21_contig00006743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00006743
         (374 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010927319.1| PREDICTED: pentatricopeptide repeat-containi...    63   1e-07

>ref|XP_010927319.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Elaeis guineensis]
           gi|743804971|ref|XP_010927320.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Elaeis guineensis]
           gi|743804975|ref|XP_010927321.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Elaeis guineensis]
          Length = 727

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 36/82 (43%), Positives = 46/82 (56%)
 Frame = -1

Query: 248 NSHPDTHPLIQTFTQLCLRGPLDAAMAALCSLQSHNLPISVVDPAAFXXXXXXXXXXXSP 69
           N  P  HPLI++F+ LCL GPL AAMAA+ SLQ+H L     DP ++           S 
Sbjct: 118 NPTPPHHPLIESFSYLCLHGPLPAAMAAMASLQAHGLR---ADPISYSQLIKLCLNRGSI 174

Query: 68  ESGRRVHRHLLSYTHRAPTMFL 3
           + GR +H HL S  H  P +FL
Sbjct: 175 DDGRLIHHHLSSDGH-CPKLFL 195


Top