BLASTX nr result

ID: Ophiopogon21_contig00006308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00006308
         (1281 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009417258.1| PREDICTED: pentatricopeptide repeat-containi...   620   e-175
ref|XP_010928656.1| PREDICTED: pentatricopeptide repeat-containi...   620   e-174
ref|XP_008789774.1| PREDICTED: pentatricopeptide repeat-containi...   613   e-173
ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [S...   551   e-154
ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays] gi|32...   546   e-152
ref|XP_004957955.1| PREDICTED: pentatricopeptide repeat-containi...   544   e-152
tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]               544   e-152
tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]               544   e-152
ref|XP_010266137.1| PREDICTED: pentatricopeptide repeat-containi...   542   e-151
ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containi...   540   e-150
ref|XP_010266140.1| PREDICTED: pentatricopeptide repeat-containi...   539   e-150
dbj|BAT02026.1| Os07g0548300 [Oryza sativa Japonica Group]            537   e-150
ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group] g...   537   e-150
ref|XP_006658672.1| PREDICTED: pentatricopeptide repeat-containi...   537   e-150
dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]    534   e-149
gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japo...   533   e-148
ref|XP_008347337.1| PREDICTED: pentatricopeptide repeat-containi...   530   e-148
ref|XP_008377072.1| PREDICTED: pentatricopeptide repeat-containi...   530   e-148
ref|XP_011459077.1| PREDICTED: pentatricopeptide repeat-containi...   530   e-147
ref|XP_008221147.1| PREDICTED: pentatricopeptide repeat-containi...   524   e-146

>ref|XP_009417258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Musa acuminata subsp. malaccensis]
          Length = 688

 Score =  620 bits (1600), Expect = e-175
 Identities = 303/408 (74%), Positives = 351/408 (86%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +PSPLT NALISASAL+GRP  AL +L L+R +   LSDH NYTLI+QSL+R PDPPDP 
Sbjct: 173  APSPLTLNALISASALNGRPGLALQLLTLLR-RHGFLSDHPNYTLILQSLVRSPDPPDPN 231

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
            LL ++L DL S S+E DARLLSD + AF+ + +PDRAL L++ AQAQGLTPKS AVVAL+
Sbjct: 232  LLETLLFDLLSTSLEPDARLLSDFVAAFAHAGDPDRALSLVSAAQAQGLTPKSSAVVALL 291

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            SALG+ GRV EAEAVF E    GLQPR RAYNALLKGYVK+G+L+DAE +F +MERCGVS
Sbjct: 292  SALGAAGRVPEAEAVFLEFHSSGLQPRTRAYNALLKGYVKIGALKDAELIFEDMERCGVS 351

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLLIDAYTNAGRWES RILIKEMEA +V PNSYVF RILAS RD+GDWQK+FA+
Sbjct: 352  PDEGTYSLLIDAYTNAGRWESARILIKEMEANDVQPNSYVFSRILASLRDKGDWQKSFAI 411

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREMRS GV+PDRHFYNV+ID FGKYNCL HAMD FD+MR DGI PD +TWNTLID+HCK
Sbjct: 412  LREMRSNGVQPDRHFYNVMIDTFGKYNCLHHAMDVFDRMRLDGITPDEITWNTLIDAHCK 471

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
            AGRHDR M+LF+ M+++GC PC TTYNI+INSLGEQE+WEEL+++  +M  QGL+PNVVT
Sbjct: 472  AGRHDRAMELFKQMQQSGCIPCATTYNIMINSLGEQEKWEELKEMFEKMKGQGLLPNVVT 531

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYGKSGRFK+A+EFLE MKA GMKPSPTMY+ALVNAYAQRG+
Sbjct: 532  YTTLVDVYGKSGRFKEAIEFLEAMKASGMKPSPTMYHALVNAYAQRGL 579



 Score =  159 bits (401), Expect = 6e-36
 Identities = 103/391 (26%), Positives = 187/391 (47%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P      AL+SA   +GR   A ++  L      L      Y  +++  ++     D  
Sbjct: 281  TPKSSAVVALLSALGAAGRVPEAEAVF-LEFHSSGLQPRTRAYNALLKGYVKIGALKDAE 339

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
            L   +  D+    +  D    S LI A++ +   + A  L+   +A  + P S     ++
Sbjct: 340  L---IFEDMERCGVSPDEGTYSLLIDAYTNAGRWESARILIKEMEANDVQPNSYVFSRIL 396

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ++L  +G  +++ A+  E+R  G+QP    YN ++  + K   L  A  VF  M   G++
Sbjct: 397  ASLRDKGDWQKSFAILREMRSNGVQPDRHFYNVMIDTFGKYNCLHHAMDVFDRMRLDGIT 456

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE T++ LIDA+  AGR +    L K+M+     P +  +  ++ S  ++  W++   +
Sbjct: 457  PDEITWNTLIDAHCKAGRHDRAMELFKQMQQSGCIPCATTYNIMINSLGEQEKWEELKEM 516

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
              +M+  G+ P+   Y  L+D +GK    + A++  + M+A G++P    ++ L++++ +
Sbjct: 517  FEKMKGQGLLPNVVTYTTLVDVYGKSGRFKEAIEFLEAMKASGMKPSPTMYHALVNAYAQ 576

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  ++ +  F  M+ +G KP     N +IN+ GE  R  E   VL  M E  L P+VVT
Sbjct: 577  RGLSEQAINAFRVMRADGIKPTVLVLNSLINAFGEDRRDNEAFSVLQYMKENDLKPDVVT 636

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F+      E M + G  P
Sbjct: 637  YTTLMKALVRVEKFEKVPAVYEEMISSGCTP 667



 Score =  135 bits (341), Expect = 6e-29
 Identities = 80/356 (22%), Positives = 174/356 (48%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G    A  I + M ++  +  D   Y+L++ +           +
Sbjct: 317  PRTRAYNALLKGYVKIGALKDAELIFEDM-ERCGVSPDEGTYSLLIDAYTNAGRWESARI 375

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L+    ++ +  ++ ++ + S ++ +     +  ++  +L   ++ G+ P       +I 
Sbjct: 376  LIK---EMEANDVQPNSYVFSRILASLRDKGDWQKSFAILREMRSNGVQPDRHFYNVMID 432

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A  VF+ +R +G+ P    +N L+  + K G    A ++F +M++ G  P
Sbjct: 433  TFGKYNCLHHAMDVFDRMRLDGITPDEITWNTLIDAHCKAGRHDRAMELFKQMQQSGCIP 492

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I++     +WE  + + ++M+ + + PN   +  ++  +   G +++A   L
Sbjct: 493  CATTYNIMINSLGEQEKWEELKEMFEKMKGQGLLPNVVTYTTLVDVYGKSGRFKEAIEFL 552

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M+++G++P    Y+ L++A+ +    + A++AF  MRADGI+P V+  N+LI++  + 
Sbjct: 553  EAMKASGMKPSPTMYHALVNAYAQRGLSEQAINAFRVMRADGIKPTVLVLNSLINAFGED 612

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R +    + + MKEN  KP   TY  ++ +L   E++E++  V   M   G  P+
Sbjct: 613  RRDNEAFSVLQYMKENDLKPDVVTYTTLMKALVRVEKFEKVPAVYEEMISSGCTPD 668



 Score =  119 bits (297), Expect = 7e-24
 Identities = 79/323 (24%), Positives = 160/323 (49%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            SP   T++ LI A   +GR + A  +++ M    D+  +   ++ I+ SL    D  D  
Sbjct: 351  SPDEGTYSLLIDAYTNAGRWESARILIKEMEAN-DVQPNSYVFSRILASLR---DKGDWQ 406

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
               ++L ++ S  ++ D    + +I  F   +    A+++    +  G+TP       LI
Sbjct: 407  KSFAILREMRSNGVQPDRHFYNVMIDTFGKYNCLHHAMDVFDRMRLDGITPDEITWNTLI 466

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
             A    GR + A  +F++++  G  P    YN ++    +     + +++F +M+  G+ 
Sbjct: 467  DAHCKAGRHDRAMELFKQMQQSGCIPCATTYNIMINSLGEQEKWEELKEMFEKMKGQGLL 526

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            P+  TY+ L+D Y  +GR++     ++ M+A  + P+  ++  ++ ++  RG  ++A   
Sbjct: 527  PNVVTYTTLVDVYGKSGRFKEAIEFLEAMKASGMKPSPTMYHALVNAYAQRGLSEQAINA 586

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
             R MR+ G++P     N LI+AFG+      A      M+ + ++PDVVT+ TL+ +  +
Sbjct: 587  FRVMRADGIKPTVLVLNSLINAFGEDRRDNEAFSVLQYMKENDLKPDVVTYTTLMKALVR 646

Query: 379  AGRHDRGMKLFEDMKENGCKPCR 311
              + ++   ++E+M  +GC P R
Sbjct: 647  VEKFEKVPAVYEEMISSGCTPDR 669


>ref|XP_010928656.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Elaeis guineensis]
            gi|743758770|ref|XP_010928664.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Elaeis guineensis]
          Length = 679

 Score =  620 bits (1598), Expect = e-174
 Identities = 306/408 (75%), Positives = 352/408 (86%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PS LTFNALISASA++GRP  AL +L LMR +   LSDH NYTL++QSLLR PDPPDP+L
Sbjct: 164  PSALTFNALISASAINGRPGQALHLLSLMR-RHGFLSDHPNYTLVLQSLLRSPDPPDPSL 222

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL +LSDL SQ +E DARL+SD ++AFS +  PDRA  LLA AQAQGLTPK+ AVVAL+S
Sbjct: 223  LLRLLSDLLSQRLEPDARLISDFVVAFSRAGEPDRAFSLLAAAQAQGLTPKTSAVVALLS 282

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ALG+ GRV EAEA+F E      LQPR RAYNALLKGYVK+G+L+DAE VF EMERC VS
Sbjct: 283  ALGAAGRVAEAEALFLEFHAGAELQPRTRAYNALLKGYVKIGALKDAELVFEEMERCSVS 342

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLLIDAYTNAGRWES RILIKEME   V PNSYVF RILASFRD+G+WQK+FAV
Sbjct: 343  PDEGTYSLLIDAYTNAGRWESARILIKEMEMNGVQPNSYVFSRILASFRDKGEWQKSFAV 402

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREMR+ GVRPDRHFYNV+IDAFGKYNCL HAMDAF++MR+DGIEPD +TWNTLI+SHCK
Sbjct: 403  LREMRNNGVRPDRHFYNVMIDAFGKYNCLHHAMDAFERMRSDGIEPDAITWNTLINSHCK 462

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
            AGRHD+ M LF++M+E+GC PC TTYNI+INSLG+QERWEEL+++L R+  QGL+PNVVT
Sbjct: 463  AGRHDKAMDLFQEMQESGCMPCTTTYNIMINSLGQQERWEELKEMLERVKGQGLLPNVVT 522

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYGKSGRFKDA+E LE MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 523  YTTLVDVYGKSGRFKDAIECLEAMKAGGLKPSPTMYHALVNAYAQRGL 570



 Score =  151 bits (381), Expect = 1e-33
 Identities = 98/391 (25%), Positives = 183/391 (46%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P      AL+SA   +GR   A ++        +L      Y  +++  ++     D  
Sbjct: 271  TPKTSAVVALLSALGAAGRVAEAEALFLEFHAGAELQPRTRAYNALLKGYVKIGALKDAE 330

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
            L   V  ++   S+  D    S LI A++ +   + A  L+   +  G+ P S     ++
Sbjct: 331  L---VFEEMERCSVSPDEGTYSLLIDAYTNAGRWESARILIKEMEMNGVQPNSYVFSRIL 387

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ++   +G  +++ AV  E+R  G++P    YN ++  + K   L  A   F  M   G+ 
Sbjct: 388  ASFRDKGEWQKSFAVLREMRNNGVRPDRHFYNVMIDAFGKYNCLHHAMDAFERMRSDGIE 447

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LI+++  AGR +    L +EM+     P +  +  ++ S   +  W++   +
Sbjct: 448  PDAITWNTLINSHCKAGRHDKAMDLFQEMQESGCMPCTTTYNIMINSLGQQERWEELKEM 507

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            L  ++  G+ P+   Y  L+D +GK    + A++  + M+A G++P    ++ L++++ +
Sbjct: 508  LERVKGQGLLPNVVTYTTLVDVYGKSGRFKDAIECLEAMKAGGLKPSPTMYHALVNAYAQ 567

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  ++ +  F  M+ +G KP     N +IN+ GE +R  E   VL  M E  L P+VVT
Sbjct: 568  RGLSEQAINAFRVMRADGIKPSIIVLNSLINAFGEDQRDTEAFSVLQFMKENDLKPDVVT 627

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F+      E M   G  P
Sbjct: 628  YTTLMKTLIRVEKFEKVPAVYEEMILSGCTP 658



 Score =  137 bits (345), Expect = 2e-29
 Identities = 81/356 (22%), Positives = 168/356 (47%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G    A  + + M ++  +  D   Y+L++ +           +
Sbjct: 308  PRTRAYNALLKGYVKIGALKDAELVFEEM-ERCSVSPDEGTYSLLIDAYTNAGRWESARI 366

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L+    ++    ++ ++ + S ++ +F       ++  +L   +  G+ P       +I 
Sbjct: 367  LIK---EMEMNGVQPNSYVFSRILASFRDKGEWQKSFAVLREMRNNGVRPDRHFYNVMID 423

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
            A G    +  A   FE +R +G++P    +N L+  + K G    A  +F EM+  G  P
Sbjct: 424  AFGKYNCLHHAMDAFERMRSDGIEPDAITWNTLINSHCKAGRHDKAMDLFQEMQESGCMP 483

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I++     RWE  + +++ ++ + + PN   +  ++  +   G ++ A   L
Sbjct: 484  CTTTYNIMINSLGQQERWEELKEMLERVKGQGLLPNVVTYTTLVDVYGKSGRFKDAIECL 543

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +    + A++AF  MRADGI+P ++  N+LI++  + 
Sbjct: 544  EAMKAGGLKPSPTMYHALVNAYAQRGLSEQAINAFRVMRADGIKPSIIVLNSLINAFGED 603

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKEN  KP   TY  ++ +L   E++E++  V   M   G  P+
Sbjct: 604  QRDTEAFSVLQFMKENDLKPDVVTYTTLMKTLIRVEKFEKVPAVYEEMILSGCTPD 659


>ref|XP_008789774.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Phoenix dactylifera]
          Length = 685

 Score =  613 bits (1581), Expect = e-173
 Identities = 304/408 (74%), Positives = 348/408 (85%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PS LTFNALISASAL+GRP  A  +L LMR +   LSDH NYTL++QSLLR PDPPDP+L
Sbjct: 170  PSALTFNALISASALNGRPGQAFHLLSLMR-RHGFLSDHPNYTLVLQSLLRSPDPPDPSL 228

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL +LSDL SQ +E DARL+SD ++AFS + +PDRAL LLA AQAQGLTPK+ AVVAL+S
Sbjct: 229  LLRLLSDLLSQRLEPDARLISDFVVAFSRAGDPDRALSLLAAAQAQGLTPKTSAVVALLS 288

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ALG+ GRV EAEAVF E      LQPR RAYNALLKGYVK+G+L+DAE VF EMERC VS
Sbjct: 289  ALGAAGRVAEAEAVFLEFHAAAELQPRTRAYNALLKGYVKIGALKDAELVFEEMERCSVS 348

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLLIDAYTNAGRWES RILIKEME   V PNSYVF RILASFRD+G+WQK+F V
Sbjct: 349  PDEGTYSLLIDAYTNAGRWESARILIKEMEMNGVQPNSYVFSRILASFRDKGEWQKSFVV 408

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREMR+ GV+PDRHFYNV+IDAFGKYNCL HAMDAF++MR+DGIEPD +TWNTLIDSHCK
Sbjct: 409  LREMRNNGVQPDRHFYNVMIDAFGKYNCLHHAMDAFERMRSDGIEPDAITWNTLIDSHCK 468

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
            AGRHD+ M+LF++M+E GC PC TTYNI+INSLG+Q RWEEL+++L RM  QGL+ NVVT
Sbjct: 469  AGRHDKAMELFQEMQEGGCMPCTTTYNIMINSLGQQGRWEELKEMLERMKGQGLLLNVVT 528

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYGKSGRF DA+E LE MK  G+KPSPTMY+ALVNAYAQRG+
Sbjct: 529  YTTLVDVYGKSGRFNDAIECLEAMKTGGLKPSPTMYHALVNAYAQRGL 576



 Score =  152 bits (385), Expect = 5e-34
 Identities = 99/391 (25%), Positives = 181/391 (46%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P      AL+SA   +GR   A ++        +L      Y  +++  ++     D  
Sbjct: 277  TPKTSAVVALLSALGAAGRVAEAEAVFLEFHAAAELQPRTRAYNALLKGYVKIGALKDAE 336

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
            L   V  ++   S+  D    S LI A++ +   + A  L+   +  G+ P S     ++
Sbjct: 337  L---VFEEMERCSVSPDEGTYSLLIDAYTNAGRWESARILIKEMEMNGVQPNSYVFSRIL 393

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ++   +G  +++  V  E+R  G+QP    YN ++  + K   L  A   F  M   G+ 
Sbjct: 394  ASFRDKGEWQKSFVVLREMRNNGVQPDRHFYNVMIDAFGKYNCLHHAMDAFERMRSDGIE 453

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LID++  AGR +    L +EM+     P +  +  ++ S   +G W++   +
Sbjct: 454  PDAITWNTLIDSHCKAGRHDKAMELFQEMQEGGCMPCTTTYNIMINSLGQQGRWEELKEM 513

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            L  M+  G+  +   Y  L+D +GK      A++  + M+  G++P    ++ L++++ +
Sbjct: 514  LERMKGQGLLLNVVTYTTLVDVYGKSGRFNDAIECLEAMKTGGLKPSPTMYHALVNAYAQ 573

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  ++ +  F  M+ +G KP     N +IN+ GE +R  E   VL  M E  L P+VVT
Sbjct: 574  RGLSEQAINAFRVMRADGIKPSIIVLNSLINAFGEDQRDTEAFSVLQFMKENDLKPDVVT 633

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F+      E M + G  P
Sbjct: 634  YTTLMKALIRVEKFEKVPAVYEEMISSGCTP 664



 Score =  138 bits (347), Expect = 1e-29
 Identities = 82/356 (23%), Positives = 168/356 (47%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G    A  + + M ++  +  D   Y+L++ +           +
Sbjct: 314  PRTRAYNALLKGYVKIGALKDAELVFEEM-ERCSVSPDEGTYSLLIDAYTNAGRWESARI 372

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L+    ++    ++ ++ + S ++ +F       ++  +L   +  G+ P       +I 
Sbjct: 373  LIK---EMEMNGVQPNSYVFSRILASFRDKGEWQKSFVVLREMRNNGVQPDRHFYNVMID 429

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
            A G    +  A   FE +R +G++P    +N L+  + K G    A ++F EM+  G  P
Sbjct: 430  AFGKYNCLHHAMDAFERMRSDGIEPDAITWNTLIDSHCKAGRHDKAMELFQEMQEGGCMP 489

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I++    GRWE  + +++ M+ + +  N   +  ++  +   G +  A   L
Sbjct: 490  CTTTYNIMINSLGQQGRWEELKEMLERMKGQGLLLNVVTYTTLVDVYGKSGRFNDAIECL 549

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +    + A++AF  MRADGI+P ++  N+LI++  + 
Sbjct: 550  EAMKTGGLKPSPTMYHALVNAYAQRGLSEQAINAFRVMRADGIKPSIIVLNSLINAFGED 609

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKEN  KP   TY  ++ +L   E++E++  V   M   G  P+
Sbjct: 610  QRDTEAFSVLQFMKENDLKPDVVTYTTLMKALIRVEKFEKVPAVYEEMISSGCTPD 665



 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 44/191 (23%), Positives = 88/191 (46%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P   T+N +I++    GR +    +L+ M+ +  LL +   YT +V    +     D   
Sbjct: 489  PCTTTYNIMINSLGQQGRWEELKEMLERMKGQ-GLLLNVVTYTTLVDVYGKSGRFNDA-- 545

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
             +  L  + +  ++    +   L+ A++     ++A+    V +A G+ P    + +LI+
Sbjct: 546  -IECLEAMKTGGLKPSPTMYHALVNAYAQRGLSEQAINAFRVMRADGIKPSIIVLNSLIN 604

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
            A G + R  EA +V + ++   L+P +  Y  L+K  ++V        V+ EM   G +P
Sbjct: 605  AFGEDQRDTEAFSVLQFMKENDLKPDVVTYTTLMKALIRVEKFEKVPAVYEEMISSGCTP 664

Query: 736  DERTYSLLIDA 704
            D +  ++L  A
Sbjct: 665  DRKARAMLRSA 675


>ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
            gi|241926361|gb|EER99505.1| hypothetical protein
            SORBIDRAFT_02g035800 [Sorghum bicolor]
          Length = 668

 Score =  551 bits (1419), Expect = e-154
 Identities = 275/408 (67%), Positives = 330/408 (80%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+  D L D A+Y+ ++ SLL   DPPD  L
Sbjct: 153  PSPLLLNSLLAASAAASRPAVALRLLSLLREH-DFLPDLASYSHLLASLLNTRDPPDAAL 211

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L SDLI AF+ ++ PD ALELLA AQA GLTP+S AV ALIS
Sbjct: 212  LERLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALIS 271

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ALGS GRV EAEA+F E    G ++PR RAYNALLKGYV++GSL++AEQV  EM +CGV+
Sbjct: 272  ALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVA 331

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRGDWQKAFAV
Sbjct: 332  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 391

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM+++GVRPDRHFYNV+ID FGKYNCL HAMDAFD+MR + IEPDVVTWNTLID+HCK
Sbjct: 392  LREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCK 451

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHDR M+LFE+M+E+ C P  TTYNI+IN LGEQERWE +  +L  M EQGL+PN++T
Sbjct: 452  GGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIIT 511

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGR+K+A++ +E MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 512  YTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559



 Score =  153 bits (387), Expect = 3e-34
 Identities = 101/391 (25%), Positives = 180/391 (46%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P      ALISA   +GR   A ++        ++      Y  +++  +R     +  
Sbjct: 260  TPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAE 319

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
                VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     ++
Sbjct: 320  ---QVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRIL 376

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +     G  ++A AV  E++  G++P    YN ++  + K   L  A   F  M    + 
Sbjct: 377  AGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIE 436

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LIDA+   GR +    L +EM     PP +  +  ++    ++  W+   A+
Sbjct: 437  PDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAM 496

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            L EM+  G+ P+   Y  L+D +G+    + A+D  + M+ADG++P    ++ L++++ +
Sbjct: 497  LSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  D  + + + MK +G +      N +IN+ GE  R  E   VL  M E GL P+V+T
Sbjct: 557  RGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVIT 616

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F       E M   G  P
Sbjct: 617  YTTLMKALIRVEQFDKVPVIYEEMITSGCAP 647



 Score =  134 bits (336), Expect = 2e-28
 Identities = 82/356 (23%), Positives = 166/356 (46%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G   +A  +L  M  +  +  D A Y+L+V +  R        +
Sbjct: 297  PRTRAYNALLKGYVRIGSLKNAEQVLDEM-SQCGVAPDEATYSLLVDAYTRAGRWESARI 355

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL    ++ +  ++  + + S ++  F    +  +A  +L   QA G+ P       +I 
Sbjct: 356  LLK---EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMID 412

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A   F+ +R E ++P +  +N L+  + K G    A ++F EM      P
Sbjct: 413  TFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPP 472

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+      RWE    ++ EM+ + + PN   +  ++  +   G +++A   +
Sbjct: 473  GTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCI 532

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +     HA++    M+ADG+E  ++  N+LI++  + 
Sbjct: 533  EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGED 592

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKENG +P   TY  ++ +L   E+++++  +   M   G  P+
Sbjct: 593  RRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPD 648



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDK------------FDLLSDHANYTLIVQS 1133
            P  +T+N LI A    GR D A+ + + MR+              +LL +   +  +   
Sbjct: 437  PDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAM 496

Query: 1132 LLRC------PDPPDPTLLLSV-------------LSDLNSQSIESDARLLSDLILAFSV 1010
            L         P+    T L+ V             +  + +  ++    +   L+ A++ 
Sbjct: 497  LSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556

Query: 1009 SSNPDRALELLAVAQAQGLTPKSPAVVALISALGSEGRVEEAEAVFEEIRCEGLQPRIRA 830
                D AL ++   +A GL      + +LI+A G + RV EA +V + ++  GL+P +  
Sbjct: 557  RGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVIT 616

Query: 829  YNALLKGYVKVGSLRDAEQVFGEMERCGVSPDERTYSLLIDA 704
            Y  L+K  ++V        ++ EM   G +PD +  ++L  A
Sbjct: 617  YTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSA 658


>ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays] gi|3289002|gb|AAC25599.1| CRP1
            [Zea mays]
          Length = 668

 Score =  546 bits (1408), Expect = e-152
 Identities = 272/408 (66%), Positives = 329/408 (80%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+  D L D A+Y+ ++ SLL   DPPD  L
Sbjct: 153  PSPLLLNSLLAASAAASRPAVALRLLSLLREH-DFLPDLASYSHLLASLLNTRDPPDAAL 211

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L SDLI AF+ ++ PD ALELLA AQA GLTP+S AV ALIS
Sbjct: 212  LERLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALIS 271

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ALG+ GRV EAEA+F E    G ++PR RAYNALLKGYV++GSL++AEQV  EM +CGV+
Sbjct: 272  ALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVA 331

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRGDWQKAFAV
Sbjct: 332  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 391

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM+++GVRPDRHFYNV+ID FGKYNCL HAMDAF++MR +GIEPDVVTWNTLID+HCK
Sbjct: 392  LREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCK 451

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHDR  +LFE+M+E+ C P  TTYNI+IN LGEQE WE +  +L  M EQGL+PN++T
Sbjct: 452  GGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIIT 511

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGR+K+A++ +E MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 512  YTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559



 Score =  158 bits (399), Expect = 1e-35
 Identities = 102/391 (26%), Positives = 182/391 (46%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P      ALISA   +GR   A ++        ++      Y  +++  +R     +  
Sbjct: 260  TPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAE 319

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
                VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     ++
Sbjct: 320  ---QVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRIL 376

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +     G  ++A AV  E++  G++P    YN ++  + K   L  A   F +M   G+ 
Sbjct: 377  AGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIE 436

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LIDA+   GR +    L +EM     PP +  +  ++    ++  W+   A+
Sbjct: 437  PDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAM 496

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            L EM+  G+ P+   Y  L+D +G+    + A+D  + M+ADG++P    ++ L++++ +
Sbjct: 497  LSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  D  + + + MK +G +      N +IN+ GE  R  E   VL  M E GL P+V+T
Sbjct: 557  RGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVIT 616

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F       E M   G  P
Sbjct: 617  YTTLMKALIRVEQFDKVPVIYEEMITSGCAP 647



 Score =  134 bits (336), Expect = 2e-28
 Identities = 81/356 (22%), Positives = 166/356 (46%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G   +A  +L  M  +  +  D A Y+L+V +  R        +
Sbjct: 297  PRTRAYNALLKGYVRIGSLKNAEQVLDEM-SQCGVAPDEATYSLLVDAYTRAGRWESARI 355

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL    ++ +  ++  + + S ++  F    +  +A  +L   QA G+ P       +I 
Sbjct: 356  LLK---EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMID 412

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A   F ++R EG++P +  +N L+  + K G    A ++F EM      P
Sbjct: 413  TFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPP 472

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+       WE    ++ EM+ + + PN   +  ++  +   G +++A   +
Sbjct: 473  GTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCI 532

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +     HA++    M+ADG+E  ++  N+LI++  + 
Sbjct: 533  EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGED 592

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + M+ENG +P   TY  ++ +L   E+++++  +   M   G  P+
Sbjct: 593  RRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPD 648


>ref|XP_004957955.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Setaria italica]
            gi|514734626|ref|XP_004957956.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Setaria italica]
            gi|944261903|gb|KQL26160.1| hypothetical protein
            SETIT_029147mg [Setaria italica]
          Length = 667

 Score =  544 bits (1402), Expect = e-152
 Identities = 272/408 (66%), Positives = 327/408 (80%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+  D L D A+Y+ ++ SLL   DPPD  L
Sbjct: 152  PSPLLLNSLLAASAAASRPAVALRLLGLLREH-DFLPDLASYSHLLASLLNTKDPPDAAL 210

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L SDLI AF+ ++ PD ALELLA AQA GLTP+S A  ALIS
Sbjct: 211  LERLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAATALIS 270

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ALG+ GRV EAEA+F E    G ++PR RAYNALLKGYV++GSL++AEQV  EM +CGV+
Sbjct: 271  ALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVA 330

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRGDWQKAFAV
Sbjct: 331  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 390

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM ++GVRPDRHFYNV+ID FGKYNCL HAMDAFD+MR +GIEPDVVTWNTL+D+H K
Sbjct: 391  LREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLVDAHRK 450

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHDR M+LFE M+E+ C P  TTYNI+IN LGEQERWE +  +L  M EQGL+PN++T
Sbjct: 451  GGRHDRAMELFEQMRESNCPPGTTTYNIMINLLGEQERWEGVEVMLSEMKEQGLVPNIIT 510

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGR+K+A++ +E MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 511  YTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 558



 Score =  153 bits (386), Expect = 3e-34
 Identities = 99/391 (25%), Positives = 179/391 (45%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P      ALISA   +GR   A ++        ++      Y  +++  +R     +  
Sbjct: 259  TPRSNAATALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAE 318

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
                VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     ++
Sbjct: 319  ---QVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRIL 375

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +     G  ++A AV  E+   G++P    YN ++  + K   L  A   F  M   G+ 
Sbjct: 376  AGFRDRGDWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIE 435

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ L+DA+   GR +    L ++M     PP +  +  ++    ++  W+    +
Sbjct: 436  PDVVTWNTLVDAHRKGGRHDRAMELFEQMRESNCPPGTTTYNIMINLLGEQERWEGVEVM 495

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            L EM+  G+ P+   Y  L+D +G+    + A+D  + M+ADG++P    ++ L++++ +
Sbjct: 496  LSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 555

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  D  + + + MK +G +      N +IN+ GE  R  E   VL  M E GL P+V+T
Sbjct: 556  RGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVIT 615

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F       E M   G  P
Sbjct: 616  YTTLMKALIRVEQFDKVPVIYEEMITSGCAP 646



 Score =  134 bits (337), Expect = 2e-28
 Identities = 81/356 (22%), Positives = 167/356 (46%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G   +A  +L  M  +  +  D A Y+L+V +  R        +
Sbjct: 296  PRTRAYNALLKGYVRIGSLKNAEQVLDEM-SQCGVAPDEATYSLLVDAYTRAGRWESARI 354

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL    ++ +  ++  + + S ++  F    +  +A  +L    A G+ P       +I 
Sbjct: 355  LLK---EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVRPDRHFYNVMID 411

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A   F+ +R EG++P +  +N L+  + K G    A ++F +M      P
Sbjct: 412  TFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLVDAHRKGGRHDRAMELFEQMRESNCPP 471

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+      RWE   +++ EM+ + + PN   +  ++  +   G +++A   +
Sbjct: 472  GTTTYNIMINLLGEQERWEGVEVMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCI 531

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +     HA++    M+ADG+E  ++  N+LI++  + 
Sbjct: 532  EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGED 591

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKENG +P   TY  ++ +L   E+++++  +   M   G  P+
Sbjct: 592  RRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPD 647


>tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 668

 Score =  544 bits (1402), Expect = e-152
 Identities = 271/408 (66%), Positives = 328/408 (80%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+  D L D A+Y+ ++ SLL   DPPD  L
Sbjct: 153  PSPLLLNSLLAASAAASRPAVALRLLSLLREH-DFLPDLASYSHLLASLLNTRDPPDAAL 211

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L SDLI AF+ ++ PD ALELLA AQA GLTP+S AV ALIS
Sbjct: 212  LERLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALIS 271

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ALG+ GRV EAEA+F E    G ++PR RAYNALLKGYV++ SL++AEQV  EM +CGV+
Sbjct: 272  ALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVA 331

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRGDWQKAFAV
Sbjct: 332  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 391

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM+++GVRPDRHFYNV+ID FGKYNCL HAMDAF++MR +GIEPDVVTWNTLID+HCK
Sbjct: 392  LREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCK 451

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHDR  +LFE+M+E+ C P  TTYNI+IN LGEQE WE +  +L  M EQGL+PN++T
Sbjct: 452  GGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIIT 511

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGR+K+A++ +E MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 512  YTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559



 Score =  158 bits (400), Expect = 8e-36
 Identities = 102/391 (26%), Positives = 182/391 (46%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P      ALISA   +GR   A ++        ++      Y  +++  +R     +  
Sbjct: 260  TPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAE 319

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
                VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     ++
Sbjct: 320  ---QVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRIL 376

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +     G  ++A AV  E++  G++P    YN ++  + K   L  A   F +M   G+ 
Sbjct: 377  AGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIE 436

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LIDA+   GR +    L +EM     PP +  +  ++    ++  W+   A+
Sbjct: 437  PDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAM 496

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            L EM+  G+ P+   Y  L+D +G+    + A+D  + M+ADG++P    ++ L++++ +
Sbjct: 497  LSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  D  + + + MK +G +      N +IN+ GE  R  E   VL  M E GL P+V+T
Sbjct: 557  RGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVIT 616

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F       E M   G  P
Sbjct: 617  YTTLMKALIRVEQFDKVPVIYEEMITSGCAP 647



 Score =  131 bits (330), Expect = 1e-27
 Identities = 80/356 (22%), Positives = 165/356 (46%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+          +A  +L  M  +  +  D A Y+L+V +  R        +
Sbjct: 297  PRTRAYNALLKGYVRIASLKNAEQVLDEM-SQCGVAPDEATYSLLVDAYTRAGRWESARI 355

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL    ++ +  ++  + + S ++  F    +  +A  +L   QA G+ P       +I 
Sbjct: 356  LLK---EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMID 412

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A   F ++R EG++P +  +N L+  + K G    A ++F EM      P
Sbjct: 413  TFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPP 472

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+       WE    ++ EM+ + + PN   +  ++  +   G +++A   +
Sbjct: 473  GTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCI 532

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +     HA++    M+ADG+E  ++  N+LI++  + 
Sbjct: 533  EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGED 592

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + M+ENG +P   TY  ++ +L   E+++++  +   M   G  P+
Sbjct: 593  RRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPD 648


>tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 617

 Score =  544 bits (1402), Expect = e-152
 Identities = 271/408 (66%), Positives = 328/408 (80%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+  D L D A+Y+ ++ SLL   DPPD  L
Sbjct: 153  PSPLLLNSLLAASAAASRPAVALRLLSLLREH-DFLPDLASYSHLLASLLNTRDPPDAAL 211

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L SDLI AF+ ++ PD ALELLA AQA GLTP+S AV ALIS
Sbjct: 212  LERLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALIS 271

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ALG+ GRV EAEA+F E    G ++PR RAYNALLKGYV++ SL++AEQV  EM +CGV+
Sbjct: 272  ALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVA 331

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRGDWQKAFAV
Sbjct: 332  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 391

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM+++GVRPDRHFYNV+ID FGKYNCL HAMDAF++MR +GIEPDVVTWNTLID+HCK
Sbjct: 392  LREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCK 451

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHDR  +LFE+M+E+ C P  TTYNI+IN LGEQE WE +  +L  M EQGL+PN++T
Sbjct: 452  GGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIIT 511

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGR+K+A++ +E MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 512  YTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559



 Score =  123 bits (308), Expect = 4e-25
 Identities = 83/342 (24%), Positives = 155/342 (45%), Gaps = 19/342 (5%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P      ALISA   +GR   A ++        ++      Y  +++  +R     +  
Sbjct: 260  TPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAE 319

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
                VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     ++
Sbjct: 320  ---QVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRIL 376

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +     G  ++A AV  E++  G++P    YN ++  + K   L  A   F +M   G+ 
Sbjct: 377  AGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIE 436

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LIDA+   GR +    L +EM     PP +  +  ++    ++  W+   A+
Sbjct: 437  PDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAM 496

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEP-------------- 422
            L EM+  G+ P+   Y  L+D +G+    + A+D  + M+ADG++P              
Sbjct: 497  LSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556

Query: 421  -----DVVTWNTLIDSHCKAGRHDRGMKLFEDMKENGCKPCR 311
                 DV+T+ TL+ +  +  + D+   ++E+M  +GC P R
Sbjct: 557  RGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 598


>ref|XP_010266137.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Nelumbo nucifera]
            gi|720032527|ref|XP_010266139.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Nelumbo nucifera]
          Length = 691

 Score =  542 bits (1397), Expect = e-151
 Identities = 261/406 (64%), Positives = 332/406 (81%)
 Frame = -3

Query: 1273 SPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTLL 1094
            +PLT+NALI A A +   + AL+++  MR +    SD  NY+LI+QSL R  +  D ++L
Sbjct: 179  TPLTYNALIGACARNDDLEKALNLMSRMR-RDGYQSDFVNYSLIIQSLTRT-NKVDSSVL 236

Query: 1093 LSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALISA 914
              +  ++ +  IE D +LL+DLI+AF+ + +PDRA+  LA+ Q QGL+PK+  +VA+I+A
Sbjct: 237  QKLYGEMETDKIELDGQLLNDLIVAFAKAGDPDRAMFFLAMVQGQGLSPKTATLVAVIAA 296

Query: 913  LGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSPD 734
            LG+ GR EEAEA+FEE++  GL+PR RAYNALLKGYVK GSLRDAE +  EMER G+SPD
Sbjct: 297  LGNLGRTEEAEAIFEEMKEGGLKPRTRAYNALLKGYVKTGSLRDAESIVSEMERGGLSPD 356

Query: 733  ERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVLR 554
            E TYSLLIDAY NAGRWES RI++KEMEA  V PNSYVF RILAS+RDRG+WQK+F+VL+
Sbjct: 357  EHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSYVFSRILASYRDRGEWQKSFSVLK 416

Query: 553  EMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAG 374
            EMRS+GVRPDRHFYNV+ID FGKYNCL+H M  F++M+ DGI+PD VTWNTLID HCK+G
Sbjct: 417  EMRSSGVRPDRHFYNVMIDTFGKYNCLEHTMATFERMQLDGIQPDTVTWNTLIDCHCKSG 476

Query: 373  RHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYT 194
            RHDR  +LF+ M+E+GC PC TTYNI+INSLGEQE+WEE++ +LG+M  QGL+PNVVTYT
Sbjct: 477  RHDRAEELFQAMQESGCLPCTTTYNIMINSLGEQEKWEEVKSLLGKMQSQGLLPNVVTYT 536

Query: 193  TLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            TL+D+YG+SGRFKDA+E LE MK+ G+KPSPTMY+ALVNAYAQRG+
Sbjct: 537  TLIDIYGQSGRFKDAIECLEAMKSAGLKPSPTMYHALVNAYAQRGL 582



 Score =  151 bits (381), Expect = 1e-33
 Identities = 98/391 (25%), Positives = 189/391 (48%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            SP   T  A+I+A    GR + A +I + M++   L      Y  +++  ++     D  
Sbjct: 284  SPKTATLVAVIAALGNLGRTEEAEAIFEEMKEG-GLKPRTRAYNALLKGYVKTGSLRDAE 342

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
               S++S++    +  D    S LI A++ +   + A  +L   +A  + P S     ++
Sbjct: 343  ---SIVSEMERGGLSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSYVFSRIL 399

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ++    G  +++ +V +E+R  G++P    YN ++  + K   L      F  M+  G+ 
Sbjct: 400  ASYRDRGEWQKSFSVLKEMRSSGVRPDRHFYNVMIDTFGKYNCLEHTMATFERMQLDGIQ 459

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LID +  +GR +    L + M+     P +  +  ++ S  ++  W++  ++
Sbjct: 460  PDTVTWNTLIDCHCKSGRHDRAEELFQAMQESGCLPCTTTYNIMINSLGEQEKWEEVKSL 519

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            L +M+S G+ P+   Y  LID +G+    + A++  + M++ G++P    ++ L++++ +
Sbjct: 520  LGKMQSQGLLPNVVTYTTLIDIYGQSGRFKDAIECLEAMKSAGLKPSPTMYHALVNAYAQ 579

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  ++ +  F  M+ +G KP     N +IN+ GE  R  E   VL  M E  L P+VVT
Sbjct: 580  RGLSEQAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDTEAFAVLQYMKENDLQPDVVT 639

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F+      E M   G  P
Sbjct: 640  YTTLMKALIRVEKFEKVPAIYEDMILSGCTP 670



 Score =  142 bits (357), Expect = 8e-31
 Identities = 85/356 (23%), Positives = 176/356 (49%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+     +G    A SI+  M ++  L  D   Y+L++ +           +
Sbjct: 320  PRTRAYNALLKGYVKTGSLRDAESIVSEM-ERGGLSPDEHTYSLLIDAYANAGRWESARI 378

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
               VL ++ + +++ ++ + S ++ ++       ++  +L   ++ G+ P       +I 
Sbjct: 379  ---VLKEMEANNVQPNSYVFSRILASYRDRGEWQKSFSVLKEMRSSGVRPDRHFYNVMID 435

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +E   A FE ++ +G+QP    +N L+  + K G    AE++F  M+  G  P
Sbjct: 436  TFGKYNCLEHTMATFERMQLDGIQPDTVTWNTLIDCHCKSGRHDRAEELFQAMQESGCLP 495

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I++     +WE  + L+ +M+++ + PN   +  ++  +   G ++ A   L
Sbjct: 496  CTTTYNIMINSLGEQEKWEEVKSLLGKMQSQGLLPNVVTYTTLIDIYGQSGRFKDAIECL 555

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M+SAG++P    Y+ L++A+ +    + A++AF  MRADG++P V+  N+LI++  + 
Sbjct: 556  EAMKSAGLKPSPTMYHALVNAYAQRGLSEQAVNAFRVMRADGLKPSVLVLNSLINAFGED 615

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKEN  +P   TY  ++ +L   E++E++  +   M   G  P+
Sbjct: 616  RRDTEAFAVLQYMKENDLQPDVVTYTTLMKALIRVEKFEKVPAIYEDMILSGCTPD 671



 Score = 72.0 bits (175), Expect = 1e-09
 Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
 Frame = -3

Query: 514 YNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRHDRGM--KLFED 341
           YN LI A  + + L+ A++   +MR DG + D V ++ +I S  +  + D  +  KL+ +
Sbjct: 183 YNALIGACARNDDLEKALNLMSRMRRDGYQSDFVNYSLIIQSLTRTNKVDSSVLQKLYGE 242

Query: 340 MKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYTTLVDVYGKSGR 161
           M+ +  +      N +I +  +    +     L  +  QGL P   T   ++   G  GR
Sbjct: 243 METDKIELDGQLLNDLIVAFAKAGDPDRAMFFLAMVQGQGLSPKTATLVAVIAALGNLGR 302

Query: 160 FKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGIVREHDFV 35
            ++A    E MK  G+KP    YNAL+  Y + G +R+ + +
Sbjct: 303 TEEAEAIFEEMKEGGLKPRTRAYNALLKGYVKTGSLRDAESI 344



 Score = 62.4 bits (150), Expect = 8e-07
 Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 32/223 (14%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLR--------- 1124
            P  +T+N LI     SGR D A  + Q M++    L     Y +++ SL           
Sbjct: 460  PDTVTWNTLIDCHCKSGRHDRAEELFQAMQES-GCLPCTTTYNIMINSLGEQEKWEEVKS 518

Query: 1123 ----------CPDPPDPTLLLSV-------------LSDLNSQSIESDARLLSDLILAFS 1013
                       P+    T L+ +             L  + S  ++    +   L+ A++
Sbjct: 519  LLGKMQSQGLLPNVVTYTTLIDIYGQSGRFKDAIECLEAMKSAGLKPSPTMYHALVNAYA 578

Query: 1012 VSSNPDRALELLAVAQAQGLTPKSPAVVALISALGSEGRVEEAEAVFEEIRCEGLQPRIR 833
                 ++A+    V +A GL P    + +LI+A G + R  EA AV + ++   LQP + 
Sbjct: 579  QRGLSEQAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDTEAFAVLQYMKENDLQPDVV 638

Query: 832  AYNALLKGYVKVGSLRDAEQVFGEMERCGVSPDERTYSLLIDA 704
             Y  L+K  ++V        ++ +M   G +PD +  ++L  A
Sbjct: 639  TYTTLMKALIRVEKFEKVPAIYEDMILSGCTPDRKARAMLRSA 681


>ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Brachypodium distachyon]
            gi|944081110|gb|KQK16462.1| hypothetical protein
            BRADI_1g28870 [Brachypodium distachyon]
            gi|944081111|gb|KQK16463.1| hypothetical protein
            BRADI_1g28870 [Brachypodium distachyon]
            gi|944081112|gb|KQK16464.1| hypothetical protein
            BRADI_1g28870 [Brachypodium distachyon]
          Length = 675

 Score =  540 bits (1390), Expect = e-150
 Identities = 272/408 (66%), Positives = 326/408 (79%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+    L D A+Y+ ++ SLL   DPPD  +
Sbjct: 160  PSPLLLNSLLAASAAASRPAIALRLLALIREH-GFLPDLASYSHLLASLLNTRDPPDAAI 218

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L SDLI AF+ ++ PD AL+LLA AQA GLTP+S AV ALIS
Sbjct: 219  LERLLGDLRESRLEPDAPLFSDLISAFARAALPDAALDLLASAQAIGLTPRSNAVTALIS 278

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ALG  GRV EAEA+F E    G ++PR RAYNALLKGYVK+GSL++AEQV  EM  CGV+
Sbjct: 279  ALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVA 338

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRGDWQKAFAV
Sbjct: 339  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 398

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM ++GV+PDRHFYNV+ID FGKYNCL HAMDAF++MR +GIEPDVVTWNTLID+H K
Sbjct: 399  LREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRK 458

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHDR M+LFE+M+E+ C P  TTYNI+IN LGEQERW  +  +L  M EQGL+PN++T
Sbjct: 459  GGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIIT 518

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGRFK+A+E +EVMKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 519  YTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGL 566



 Score =  149 bits (377), Expect = 4e-33
 Identities = 87/327 (26%), Positives = 155/327 (47%)
 Frame = -3

Query: 1087 VLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALISALG 908
            VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     +++   
Sbjct: 328  VLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR 387

Query: 907  SEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSPDER 728
              G  ++A AV  E+   G+QP    YN ++  + K   L  A   F  M   G+ PD  
Sbjct: 388  DRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVV 447

Query: 727  TYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVLREM 548
            T++ LIDA+   GR +    L +EM     PP +  +  ++    ++  W     +L EM
Sbjct: 448  TWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEM 507

Query: 547  RSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRH 368
            +  G+ P+   Y  L+D +G+    + A++  + M+ADG++P    ++ L++++ + G  
Sbjct: 508  KEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLA 567

Query: 367  DRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYTTL 188
            D  + + + M+ +G +      N ++N+ GE  R  E   VL  M E  L P+V+TYTTL
Sbjct: 568  DHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTL 627

Query: 187  VDVYGKSGRFKDAVEFLEVMKARGMKP 107
            +    +  +F       E M   G  P
Sbjct: 628  MKALIRIEQFDKVPVIYEEMITSGCAP 654



 Score =  129 bits (324), Expect = 5e-27
 Identities = 82/356 (23%), Positives = 162/356 (45%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G   +A  +L  M D   +  D A Y+L+V +  R        +
Sbjct: 304  PRTRAYNALLKGYVKIGSLKNAEQVLDEMSD-CGVAPDEATYSLLVDAYTRAGRWESARI 362

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL    ++ +  ++  + + S ++  F    +  +A  +L    A G+ P       +I 
Sbjct: 363  LLK---EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMID 419

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A   F  +R EG++P +  +N L+  + K G    A ++F EM      P
Sbjct: 420  TFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPP 479

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+      RW     ++ EM+ + + PN   +  ++  +   G +++A   +
Sbjct: 480  GTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECI 539

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +     HA++    MRADG+E   V  N+L+++  + 
Sbjct: 540  EVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGED 599

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKEN  +P   TY  ++ +L   E+++++  +   M   G  P+
Sbjct: 600  RRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPD 655


>ref|XP_010266140.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X2 [Nelumbo nucifera]
          Length = 616

 Score =  539 bits (1389), Expect = e-150
 Identities = 260/404 (64%), Positives = 330/404 (81%)
 Frame = -3

Query: 1273 SPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTLL 1094
            +PLT+NALI A A +   + AL+++  MR +    SD  NY+LI+QSL R  +  D ++L
Sbjct: 179  TPLTYNALIGACARNDDLEKALNLMSRMR-RDGYQSDFVNYSLIIQSLTRT-NKVDSSVL 236

Query: 1093 LSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALISA 914
              +  ++ +  IE D +LL+DLI+AF+ + +PDRA+  LA+ Q QGL+PK+  +VA+I+A
Sbjct: 237  QKLYGEMETDKIELDGQLLNDLIVAFAKAGDPDRAMFFLAMVQGQGLSPKTATLVAVIAA 296

Query: 913  LGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSPD 734
            LG+ GR EEAEA+FEE++  GL+PR RAYNALLKGYVK GSLRDAE +  EMER G+SPD
Sbjct: 297  LGNLGRTEEAEAIFEEMKEGGLKPRTRAYNALLKGYVKTGSLRDAESIVSEMERGGLSPD 356

Query: 733  ERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVLR 554
            E TYSLLIDAY NAGRWES RI++KEMEA  V PNSYVF RILAS+RDRG+WQK+F+VL+
Sbjct: 357  EHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSYVFSRILASYRDRGEWQKSFSVLK 416

Query: 553  EMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAG 374
            EMRS+GVRPDRHFYNV+ID FGKYNCL+H M  F++M+ DGI+PD VTWNTLID HCK+G
Sbjct: 417  EMRSSGVRPDRHFYNVMIDTFGKYNCLEHTMATFERMQLDGIQPDTVTWNTLIDCHCKSG 476

Query: 373  RHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYT 194
            RHDR  +LF+ M+E+GC PC TTYNI+INSLGEQE+WEE++ +LG+M  QGL+PNVVTYT
Sbjct: 477  RHDRAEELFQAMQESGCLPCTTTYNIMINSLGEQEKWEEVKSLLGKMQSQGLLPNVVTYT 536

Query: 193  TLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQR 62
            TL+D+YG+SGRFKDA+E LE MK+ G+KPSPTMY+ALVNAYAQR
Sbjct: 537  TLIDIYGQSGRFKDAIECLEAMKSAGLKPSPTMYHALVNAYAQR 580



 Score = 72.0 bits (175), Expect = 1e-09
 Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
 Frame = -3

Query: 514 YNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRHDRGM--KLFED 341
           YN LI A  + + L+ A++   +MR DG + D V ++ +I S  +  + D  +  KL+ +
Sbjct: 183 YNALIGACARNDDLEKALNLMSRMRRDGYQSDFVNYSLIIQSLTRTNKVDSSVLQKLYGE 242

Query: 340 MKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYTTLVDVYGKSGR 161
           M+ +  +      N +I +  +    +     L  +  QGL P   T   ++   G  GR
Sbjct: 243 METDKIELDGQLLNDLIVAFAKAGDPDRAMFFLAMVQGQGLSPKTATLVAVIAALGNLGR 302

Query: 160 FKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGIVREHDFV 35
            ++A    E MK  G+KP    YNAL+  Y + G +R+ + +
Sbjct: 303 TEEAEAIFEEMKEGGLKPRTRAYNALLKGYVKTGSLRDAESI 344


>dbj|BAT02026.1| Os07g0548300 [Oryza sativa Japonica Group]
          Length = 645

 Score =  537 bits (1384), Expect = e-150
 Identities = 270/408 (66%), Positives = 326/408 (79%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+    L D A+Y+ ++ SLL   DPPD  L
Sbjct: 146  PSPLLLNSLLAASAAASRPAVALRLLGLLREH-SFLPDLASYSHLLASLLNTRDPPDAAL 204

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L SDLI AF+ +  PD ALELLA AQA GLTP+S AV ALIS
Sbjct: 205  LDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALIS 264

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +LGS  RV EAEA+F E    G ++PR RAYNALLKGYVK+GSL++AEQV  EM +CGV+
Sbjct: 265  SLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVA 324

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRG+WQKAFAV
Sbjct: 325  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAV 384

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM ++GVRPDRHFYNV+ID FGKYNCL HAMDAFD+MR +GIEPDVVTWNTLID+HCK
Sbjct: 385  LREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCK 444

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHDR ++LF++M+E+ C    TTYNI+IN LGE++RWE +  +L  M EQGL+PN++T
Sbjct: 445  GGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIIT 504

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGRFK+AV+ +E MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 505  YTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGL 552



 Score =  129 bits (325), Expect = 4e-27
 Identities = 75/287 (26%), Positives = 136/287 (47%)
 Frame = -3

Query: 1087 VLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALISALG 908
            VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     +++   
Sbjct: 314  VLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR 373

Query: 907  SEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSPDER 728
              G  ++A AV  E+   G++P    YN ++  + K   L  A   F  M   G+ PD  
Sbjct: 374  DRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVV 433

Query: 727  TYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVLREM 548
            T++ LIDA+   GR +    L  EM     P  +  +  ++    +   W+   A+L EM
Sbjct: 434  TWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEM 493

Query: 547  RSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRH 368
            +  G+ P+   Y  L+D +G+    + A+D  + M+ADG++P    ++ L++++ + G  
Sbjct: 494  KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553

Query: 367  DRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTE 227
            D  + + + M+ +G +      N +IN+ GE  R  E   VL  M E
Sbjct: 554  DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 600



 Score =  115 bits (289), Expect = 6e-23
 Identities = 74/316 (23%), Positives = 143/316 (45%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G   +A  +L  M  +  +  D A Y+L+V +  R        +
Sbjct: 290  PRTRAYNALLKGYVKIGSLKNAEQVLDEM-SQCGVAPDEATYSLLVDAYTRAGRWESARI 348

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL    ++ +  ++  + + S ++  F       +A  +L    A G+ P       +I 
Sbjct: 349  LLK---EMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMID 405

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A   F+ +R EG++P +  +N L+  + K G    A ++F EM       
Sbjct: 406  TFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPL 465

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+      RWE    ++ EM+ + + PN   +  ++  +   G +++A   +
Sbjct: 466  GTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCI 525

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +     HA++    MRADG+E   V  N+LI++  + 
Sbjct: 526  EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGED 585

Query: 376  GRHDRGMKLFEDMKEN 329
             R      + + MKEN
Sbjct: 586  RRIAEAFSVLQFMKEN 601


>ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
            gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza
            sativa Japonica Group] gi|113611463|dbj|BAF21841.1|
            Os07g0548300 [Oryza sativa Japonica Group]
          Length = 661

 Score =  537 bits (1384), Expect = e-150
 Identities = 270/408 (66%), Positives = 326/408 (79%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+    L D A+Y+ ++ SLL   DPPD  L
Sbjct: 146  PSPLLLNSLLAASAAASRPAVALRLLGLLREH-SFLPDLASYSHLLASLLNTRDPPDAAL 204

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L SDLI AF+ +  PD ALELLA AQA GLTP+S AV ALIS
Sbjct: 205  LDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALIS 264

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +LGS  RV EAEA+F E    G ++PR RAYNALLKGYVK+GSL++AEQV  EM +CGV+
Sbjct: 265  SLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVA 324

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRG+WQKAFAV
Sbjct: 325  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAV 384

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM ++GVRPDRHFYNV+ID FGKYNCL HAMDAFD+MR +GIEPDVVTWNTLID+HCK
Sbjct: 385  LREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCK 444

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHDR ++LF++M+E+ C    TTYNI+IN LGE++RWE +  +L  M EQGL+PN++T
Sbjct: 445  GGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIIT 504

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGRFK+AV+ +E MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 505  YTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGL 552



 Score =  152 bits (385), Expect = 5e-34
 Identities = 89/327 (27%), Positives = 156/327 (47%)
 Frame = -3

Query: 1087 VLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALISALG 908
            VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     +++   
Sbjct: 314  VLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR 373

Query: 907  SEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSPDER 728
              G  ++A AV  E+   G++P    YN ++  + K   L  A   F  M   G+ PD  
Sbjct: 374  DRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVV 433

Query: 727  TYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVLREM 548
            T++ LIDA+   GR +    L  EM     P  +  +  ++    +   W+   A+L EM
Sbjct: 434  TWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEM 493

Query: 547  RSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRH 368
            +  G+ P+   Y  L+D +G+    + A+D  + M+ADG++P    ++ L++++ + G  
Sbjct: 494  KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553

Query: 367  DRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYTTL 188
            D  + + + M+ +G +      N +IN+ GE  R  E   VL  M E GL P+V+TYTTL
Sbjct: 554  DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 613

Query: 187  VDVYGKSGRFKDAVEFLEVMKARGMKP 107
            +    +  +F+      E M   G  P
Sbjct: 614  MKALIRVEQFEKVPVIYEEMITSGCAP 640



 Score =  132 bits (333), Expect = 5e-28
 Identities = 84/356 (23%), Positives = 163/356 (45%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G   +A  +L  M  +  +  D A Y+L+V +  R        +
Sbjct: 290  PRTRAYNALLKGYVKIGSLKNAEQVLDEM-SQCGVAPDEATYSLLVDAYTRAGRWESARI 348

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL    ++ +  ++  + + S ++  F       +A  +L    A G+ P       +I 
Sbjct: 349  LLK---EMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMID 405

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A   F+ +R EG++P +  +N L+  + K G    A ++F EM       
Sbjct: 406  TFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPL 465

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+      RWE    ++ EM+ + + PN   +  ++  +   G +++A   +
Sbjct: 466  GTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCI 525

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +     HA++    MRADG+E   V  N+LI++  + 
Sbjct: 526  EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGED 585

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKENG +P   TY  ++ +L   E++E++  +   M   G  P+
Sbjct: 586  RRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPD 641


>ref|XP_006658672.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like, partial [Oryza brachyantha]
          Length = 654

 Score =  537 bits (1383), Expect = e-150
 Identities = 269/408 (65%), Positives = 326/408 (79%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+  + L D A+Y+ ++ SLL   DPPD  L
Sbjct: 139  PSPLLLNSLLAASAAASRPAVALRLLGLLREH-NFLPDLASYSHLLASLLNTRDPPDAAL 197

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L  DLI AF+ ++ PD ALELLA AQA GLTP+S AV ALIS
Sbjct: 198  LERLLGDLRESRLEPDAPLFPDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALIS 257

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +LG   RV EAEA+F E    G ++PR RAYNALLKGYVK+GSL++AEQV  EM RCGV+
Sbjct: 258  SLGLARRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSRCGVA 317

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRG+WQKAFAV
Sbjct: 318  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAV 377

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM ++GVRPDRHFYNV+ID FGKYNCL HAMDAFD+MR +GI+PDVVTWNTLID+HCK
Sbjct: 378  LREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIDPDVVTWNTLIDAHCK 437

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHDR ++LF++M+E+ C P  TTYNI+IN LGE+ERWE +  +   M EQGL+PN++T
Sbjct: 438  GGRHDRAIELFDEMRESKCPPGTTTYNIMINLLGEEERWEGVEAMQAEMKEQGLVPNIIT 497

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGRFK+AV+ +E MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 498  YTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGL 545



 Score =  154 bits (388), Expect = 2e-34
 Identities = 89/327 (27%), Positives = 157/327 (48%)
 Frame = -3

Query: 1087 VLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALISALG 908
            VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     +++   
Sbjct: 307  VLDEMSRCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR 366

Query: 907  SEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSPDER 728
              G  ++A AV  E+   G++P    YN ++  + K   L  A   F  M   G+ PD  
Sbjct: 367  DRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIDPDVV 426

Query: 727  TYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVLREM 548
            T++ LIDA+   GR +    L  EM   + PP +  +  ++    +   W+   A+  EM
Sbjct: 427  TWNTLIDAHCKGGRHDRAIELFDEMRESKCPPGTTTYNIMINLLGEEERWEGVEAMQAEM 486

Query: 547  RSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRH 368
            +  G+ P+   Y  L+D +G+    + A+D  + M+ADG++P    ++ L++++ + G  
Sbjct: 487  KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 546

Query: 367  DRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYTTL 188
            D  + + + M+ +G +      N +IN+ GE  R  E   VL  M E GL P+V+TYTTL
Sbjct: 547  DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 606

Query: 187  VDVYGKSGRFKDAVEFLEVMKARGMKP 107
            +    +  +F+      E M   G  P
Sbjct: 607  MKALIRVEQFEKVPVVYEEMITSGCAP 633



 Score =  134 bits (336), Expect = 2e-28
 Identities = 86/356 (24%), Positives = 162/356 (45%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G   +A  +L  M  +  +  D A Y+L+V +  R        +
Sbjct: 283  PRTRAYNALLKGYVKIGSLKNAEQVLDEM-SRCGVAPDEATYSLLVDAYTRAGRWESARI 341

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL    ++ +  ++  + + S ++  F       +A  +L    A G+ P       +I 
Sbjct: 342  LLK---EMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMID 398

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A   F+ +R EG+ P +  +N L+  + K G    A ++F EM      P
Sbjct: 399  TFGKYNCLGHAMDAFDRMREEGIDPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESKCPP 458

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+      RWE    +  EM+ + + PN   +  ++  +   G +++A   +
Sbjct: 459  GTTTYNIMINLLGEEERWEGVEAMQAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCI 518

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +     HA++    MRADG+E   V  N+LI++  + 
Sbjct: 519  EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGED 578

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKENG +P   TY  ++ +L   E++E++  V   M   G  P+
Sbjct: 579  RRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVVYEEMITSGCAPD 634


>dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  534 bits (1375), Expect = e-149
 Identities = 266/408 (65%), Positives = 324/408 (79%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+  + L D A+Y+ ++ SLL   DPPD  +
Sbjct: 158  PSPLLLNSLLAASAAASRPAIALRLLALIREH-NFLPDLASYSHLLASLLNTRDPPDAAI 216

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L SDLI AF+ ++ PD ALELLA AQA GLTP+S AV ALIS
Sbjct: 217  LERLLGDLRDSRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALIS 276

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ALG  GRV EAEA+F E    G ++PR RAYNALLKGYVK+GSL++AE V  EM  CGV+
Sbjct: 277  ALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVA 336

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRGDWQKAFAV
Sbjct: 337  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 396

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM ++GV+PDRHFYNV+ID FGKYNCL HAMD F++MR +GIEPDVVTWNTLID+HCK
Sbjct: 397  LREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCK 456

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHD  M+LF++M+E+ C P  TTYNI+IN LGEQERW  +  ++  M EQGL+PN++T
Sbjct: 457  GGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIIT 516

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGR+K+A++ +E MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 517  YTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 564



 Score =  153 bits (386), Expect = 3e-34
 Identities = 99/391 (25%), Positives = 178/391 (45%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P      ALISA  ++GR   A ++        ++      Y  +++  ++     +  
Sbjct: 265  TPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAE 324

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
                VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     ++
Sbjct: 325  ---HVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRIL 381

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +     G  ++A AV  E+   G+QP    YN ++  + K   L  A  VF  M   G+ 
Sbjct: 382  AGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIE 441

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LIDA+   GR +    L KEM     PP +  +  ++    ++  W     +
Sbjct: 442  PDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETM 501

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            + EM+  G+ P+   Y  L+D +G+    + A+D  + M+ADG++P    ++ L++++ +
Sbjct: 502  MSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 561

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  D  + + + M+ +G +      N +IN+ GE  R  E   VL  M E    P+V+T
Sbjct: 562  RGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVIT 621

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F       E M   G  P
Sbjct: 622  YTTLMKALIRVEQFDKVPVIYEEMITSGCAP 652



 Score =  130 bits (328), Expect = 2e-27
 Identities = 83/356 (23%), Positives = 163/356 (45%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G   +A  +L  M +   +  D A Y+L+V +  R        +
Sbjct: 302  PRTRAYNALLKGYVKIGSLKNAEHVLDEMSE-CGVAPDEATYSLLVDAYTRAGRWESARI 360

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL    ++ +  ++  + + S ++  F    +  +A  +L    A G+ P       +I 
Sbjct: 361  LLK---EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMID 417

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A  VF  +R EG++P +  +N L+  + K G    A ++F EM      P
Sbjct: 418  TFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPP 477

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+      RW     ++ EM+ + + PN   +  ++  +   G +++A   +
Sbjct: 478  GTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCI 537

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +     HA++    MRADG+E   V  N+LI++  + 
Sbjct: 538  EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGED 597

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKEN  +P   TY  ++ +L   E+++++  +   M   G  P+
Sbjct: 598  RRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPD 653


>gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
          Length = 661

 Score =  533 bits (1374), Expect = e-148
 Identities = 268/408 (65%), Positives = 325/408 (79%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            PSPL  N+L++ASA + RP  AL +L L+R+    L D A+Y+ ++  LL   DPP+  L
Sbjct: 146  PSPLLLNSLLAASAAASRPAVALRLLGLLREH-SFLPDLASYSHLLALLLNTRDPPEAAL 204

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            L  +L DL    +E DA L SDLI AF+ +  PD ALELLA AQA GLTP+S AV ALIS
Sbjct: 205  LDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALIS 264

Query: 916  ALGSEGRVEEAEAVFEEIRCEG-LQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +LGS  RV EAEA+F E    G ++PR RAYNALLKGYVK+GSL++AEQV  EM +CGV+
Sbjct: 265  SLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVA 324

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLL+DAYT AGRWES RIL+KEMEA  V P+SYVF RILA FRDRG+WQKAFAV
Sbjct: 325  PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAV 384

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM ++GVRPDRHFYNV+ID FGKYNCL HAMDAFD+MR +GIEPDVVTWNTLID+HCK
Sbjct: 385  LREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCK 444

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             GRHDR ++LF++M+E+ C    TTYNI+IN LGE++RWE +  +L  M EQGL+PN++T
Sbjct: 445  GGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIIT 504

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVDVYG+SGRFK+AV+ +E MKA G+KPSPTMY+ALVNAYAQRG+
Sbjct: 505  YTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGL 552



 Score =  152 bits (385), Expect = 5e-34
 Identities = 89/327 (27%), Positives = 156/327 (47%)
 Frame = -3

Query: 1087 VLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALISALG 908
            VL +++   +  D    S L+ A++ +   + A  LL   +A G+ P S     +++   
Sbjct: 314  VLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR 373

Query: 907  SEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSPDER 728
              G  ++A AV  E+   G++P    YN ++  + K   L  A   F  M   G+ PD  
Sbjct: 374  DRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVV 433

Query: 727  TYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVLREM 548
            T++ LIDA+   GR +    L  EM     P  +  +  ++    +   W+   A+L EM
Sbjct: 434  TWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEM 493

Query: 547  RSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRH 368
            +  G+ P+   Y  L+D +G+    + A+D  + M+ADG++P    ++ L++++ + G  
Sbjct: 494  KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553

Query: 367  DRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYTTL 188
            D  + + + M+ +G +      N +IN+ GE  R  E   VL  M E GL P+V+TYTTL
Sbjct: 554  DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 613

Query: 187  VDVYGKSGRFKDAVEFLEVMKARGMKP 107
            +    +  +F+      E M   G  P
Sbjct: 614  MKALIRVEQFEKVPVIYEEMITSGCAP 640



 Score =  132 bits (333), Expect = 5e-28
 Identities = 84/356 (23%), Positives = 163/356 (45%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+      G   +A  +L  M  +  +  D A Y+L+V +  R        +
Sbjct: 290  PRTRAYNALLKGYVKIGSLKNAEQVLDEM-SQCGVAPDEATYSLLVDAYTRAGRWESARI 348

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
            LL    ++ +  ++  + + S ++  F       +A  +L    A G+ P       +I 
Sbjct: 349  LLK---EMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMID 405

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    +  A   F+ +R EG++P +  +N L+  + K G    A ++F EM       
Sbjct: 406  TFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPL 465

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+      RWE    ++ EM+ + + PN   +  ++  +   G +++A   +
Sbjct: 466  GTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCI 525

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M++ G++P    Y+ L++A+ +     HA++    MRADG+E   V  N+LI++  + 
Sbjct: 526  EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGED 585

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKENG +P   TY  ++ +L   E++E++  +   M   G  P+
Sbjct: 586  RRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPD 641


>ref|XP_008347337.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like, partial [Malus domestica]
          Length = 597

 Score =  530 bits (1366), Expect = e-148
 Identities = 256/408 (62%), Positives = 323/408 (79%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            S +PLT+NALI A A +G  + AL ++  MR      SD  NY+LI+QSL R  +  D  
Sbjct: 83   SLTPLTYNALIGACARNGDLEKALHLMSRMRQD-GYRSDFVNYSLIIQSLTRS-NKIDSP 140

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
            ++  +  ++ S+SIE D +L +D+I  F+ +  P +A+ LLA+ QA GL+PK+  +VA+I
Sbjct: 141  IMFKLYREIESESIEIDGQLFNDIIAGFAKAGEPSQAVHLLAMVQATGLSPKTATLVAVI 200

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            SALG+ GRV EAEA+FEE+R  GLQPR RAYNALLKGYVK G L+DAE +  +ME+ G+S
Sbjct: 201  SALGNSGRVVEAEAIFEEMREGGLQPRTRAYNALLKGYVKAGQLKDAESIVSQMEKSGIS 260

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLLIDAY NAGRWES RI++KEMEA  V PNSYVF RILAS+RDRG+WQK+F V
Sbjct: 261  PDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQV 320

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM+S+GVRPDRHFYNV+ID FGK NCL HAM  F++M ++GI PD VTWNTLID HCK
Sbjct: 321  LREMKSSGVRPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIHPDTVTWNTLIDCHCK 380

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
            +G H R  +LFE+M+++GC PC TTYNI+INS GEQ+RW+E++ +LG+M  QGL+PN+VT
Sbjct: 381  SGHHVRAEELFEEMQQSGCAPCATTYNIMINSFGEQQRWDEVKGLLGKMQSQGLLPNIVT 440

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVD+YGKSGRF DA+E LEVMK+ GMKPSPTMYNAL+NAYAQRG+
Sbjct: 441  YTTLVDIYGKSGRFTDAIECLEVMKSAGMKPSPTMYNALINAYAQRGL 488



 Score =  153 bits (386), Expect = 3e-34
 Identities = 105/391 (26%), Positives = 182/391 (46%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            SP   T  A+ISA   SGR   A +I + MR+   L      Y  +++  ++     D  
Sbjct: 190  SPKTATLVAVISALGNSGRVVEAEAIFEEMREG-GLQPRTRAYNALLKGYVKAGQLKDAE 248

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
               S++S +    I  D    S LI A++ +   + A  +L   +A  + P S     ++
Sbjct: 249  ---SIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRIL 305

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ++    G  +++  V  E++  G++P    YN ++  + K   L  A   F  M   G+ 
Sbjct: 306  ASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIH 365

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LID +  +G       L +EM+     P +  +  ++ SF ++  W +   +
Sbjct: 366  PDTVTWNTLIDCHCKSGHHVRAEELFEEMQQSGCAPCATTYNIMINSFGEQQRWDEVKGL 425

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            L +M+S G+ P+   Y  L+D +GK      A++  + M++ G++P    +N LI+++ +
Sbjct: 426  LGKMQSQGLLPNIVTYTTLVDIYGKSGRFTDAIECLEVMKSAGMKPSPTMYNALINAYAQ 485

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  ++ +  F  M+ +G KP     N +IN+ GE  R  E   VL  M E  L P+VVT
Sbjct: 486  RGLSEQALNAFRVMRADGLKPSPLALNSLINAFGEDRRDTEAFSVLQYMKENDLKPDVVT 545

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F       E M   G  P
Sbjct: 546  YTTLMKTLIRVDKFCKVPAVYEEMIMSGCTP 576



 Score =  145 bits (367), Expect = 6e-32
 Identities = 87/356 (24%), Positives = 178/356 (50%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+     +G+   A SI+  M +K  +  D   Y+L++ +           +
Sbjct: 226  PRTRAYNALLKGYVKAGQLKDAESIVSQM-EKSGISPDEHTYSLLIDAYANAGRWESARI 284

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
               VL ++ + +++ ++ + S ++ ++       ++ ++L   ++ G+ P       +I 
Sbjct: 285  ---VLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMID 341

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    ++ A A FE +  EG+ P    +N L+  + K G    AE++F EM++ G +P
Sbjct: 342  TFGKSNCLDHAMATFERMLSEGIHPDTVTWNTLIDCHCKSGHHVRAEELFEEMQQSGCAP 401

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+++    RW+  + L+ +M+++ + PN   +  ++  +   G +  A   L
Sbjct: 402  CATTYNIMINSFGEQQRWDEVKGLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFTDAIECL 461

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M+SAG++P    YN LI+A+ +    + A++AF  MRADG++P  +  N+LI++  + 
Sbjct: 462  EVMKSAGMKPSPTMYNALINAYAQRGLSEQALNAFRVMRADGLKPSPLALNSLINAFGED 521

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKEN  KP   TY  ++ +L   +++ ++  V   M   G  P+
Sbjct: 522  RRDTEAFSVLQYMKENDLKPDVVTYTTLMKTLIRVDKFCKVPAVYEEMIMSGCTPD 577



 Score = 69.7 bits (169), Expect = 5e-09
 Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
 Frame = -3

Query: 514 YNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRHDRGM--KLFED 341
           YN LI A  +   L+ A+    +MR DG   D V ++ +I S  ++ + D  +  KL+ +
Sbjct: 89  YNALIGACARNGDLEKALHLMSRMRQDGYRSDFVNYSLIIQSLTRSNKIDSPIMFKLYRE 148

Query: 340 MKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYTTLVDVYGKSGR 161
           ++    +     +N +I    +     +   +L  +   GL P   T   ++   G SGR
Sbjct: 149 IESESIEIDGQLFNDIIAGFAKAGEPSQAVHLLAMVQATGLSPKTATLVAVISALGNSGR 208

Query: 160 FKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGIVREHDFV 35
             +A    E M+  G++P    YNAL+  Y + G +++ + +
Sbjct: 209 VVEAEAIFEEMREGGLQPRTRAYNALLKGYVKAGQLKDAESI 250



 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 50/192 (26%), Positives = 89/192 (46%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P   T+N +I++     R D    +L  M+ +  LL +   YT +V    +     D  
Sbjct: 400  APCATTYNIMINSFGEQQRWDEVKGLLGKMQSQ-GLLPNIVTYTTLVDIYGKSGRFTDAI 458

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
              L V+    S  ++    + + LI A++     ++AL    V +A GL P   A+ +LI
Sbjct: 459  ECLEVMK---SAGMKPSPTMYNALINAYAQRGLSEQALNAFRVMRADGLKPSPLALNSLI 515

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +A G + R  EA +V + ++   L+P +  Y  L+K  ++V        V+ EM   G +
Sbjct: 516  NAFGEDRRDTEAFSVLQYMKENDLKPDVVTYTTLMKTLIRVDKFCKVPAVYEEMIMSGCT 575

Query: 739  PDERTYSLLIDA 704
            PD +  ++L  A
Sbjct: 576  PDRKARAMLRSA 587


>ref|XP_008377072.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Malus domestica]
          Length = 721

 Score =  530 bits (1366), Expect = e-148
 Identities = 256/408 (62%), Positives = 323/408 (79%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            S +PLT+NALI A A +G  + AL ++  MR      SD  NY+LI+QSL R  +  D  
Sbjct: 207  SLTPLTYNALIGACARNGDLEKALHLMSRMRQD-GYRSDFVNYSLIIQSLTRS-NKIDSP 264

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
            ++  +  ++ S+SIE D +L +D+I  F+ +  P +A+ LLA+ QA GL+PK+  +VA+I
Sbjct: 265  IMFKLYREIESESIEIDGQLFNDIIAGFAKAGEPSQAVHLLAMVQATGLSPKTATLVAVI 324

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            SALG+ GRV EAEA+FEE+R  GLQPR RAYNALLKGYVK G L+DAE +  +ME+ G+S
Sbjct: 325  SALGNSGRVVEAEAIFEEMREGGLQPRTRAYNALLKGYVKAGQLKDAESIVSQMEKSGIS 384

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLLIDAY NAGRWES RI++KEMEA  V PNSYVF RILAS+RDRG+WQK+F V
Sbjct: 385  PDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQV 444

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM+S+GVRPDRHFYNV+ID FGK NCL HAM  F++M ++GI PD VTWNTLID HCK
Sbjct: 445  LREMKSSGVRPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIHPDTVTWNTLIDCHCK 504

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
            +G H R  +LFE+M+++GC PC TTYNI+INS GEQ+RW+E++ +LG+M  QGL+PN+VT
Sbjct: 505  SGHHVRAEELFEEMQQSGCAPCATTYNIMINSFGEQQRWDEVKGLLGKMQSQGLLPNIVT 564

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVD+YGKSGRF DA+E LEVMK+ GMKPSPTMYNAL+NAYAQRG+
Sbjct: 565  YTTLVDIYGKSGRFTDAIECLEVMKSAGMKPSPTMYNALINAYAQRGL 612



 Score =  153 bits (386), Expect = 3e-34
 Identities = 105/391 (26%), Positives = 182/391 (46%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            SP   T  A+ISA   SGR   A +I + MR+   L      Y  +++  ++     D  
Sbjct: 314  SPKTATLVAVISALGNSGRVVEAEAIFEEMREG-GLQPRTRAYNALLKGYVKAGQLKDAE 372

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
               S++S +    I  D    S LI A++ +   + A  +L   +A  + P S     ++
Sbjct: 373  ---SIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRIL 429

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ++    G  +++  V  E++  G++P    YN ++  + K   L  A   F  M   G+ 
Sbjct: 430  ASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIH 489

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LID +  +G       L +EM+     P +  +  ++ SF ++  W +   +
Sbjct: 490  PDTVTWNTLIDCHCKSGHHVRAEELFEEMQQSGCAPCATTYNIMINSFGEQQRWDEVKGL 549

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            L +M+S G+ P+   Y  L+D +GK      A++  + M++ G++P    +N LI+++ +
Sbjct: 550  LGKMQSQGLLPNIVTYTTLVDIYGKSGRFTDAIECLEVMKSAGMKPSPTMYNALINAYAQ 609

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  ++ +  F  M+ +G KP     N +IN+ GE  R  E   VL  M E  L P+VVT
Sbjct: 610  RGLSEQALNAFRVMRADGLKPSPLALNSLINAFGEDRRDTEAFSVLQYMKENDLKPDVVT 669

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKP 107
            YTTL+    +  +F       E M   G  P
Sbjct: 670  YTTLMKTLIRVDKFCKVPAVYEEMIMSGCTP 700



 Score =  145 bits (367), Expect = 6e-32
 Identities = 87/356 (24%), Positives = 178/356 (50%)
 Frame = -3

Query: 1276 PSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTL 1097
            P    +NAL+     +G+   A SI+  M +K  +  D   Y+L++ +           +
Sbjct: 350  PRTRAYNALLKGYVKAGQLKDAESIVSQM-EKSGISPDEHTYSLLIDAYANAGRWESARI 408

Query: 1096 LLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALIS 917
               VL ++ + +++ ++ + S ++ ++       ++ ++L   ++ G+ P       +I 
Sbjct: 409  ---VLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMID 465

Query: 916  ALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSP 737
              G    ++ A A FE +  EG+ P    +N L+  + K G    AE++F EM++ G +P
Sbjct: 466  TFGKSNCLDHAMATFERMLSEGIHPDTVTWNTLIDCHCKSGHHVRAEELFEEMQQSGCAP 525

Query: 736  DERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVL 557
               TY+++I+++    RW+  + L+ +M+++ + PN   +  ++  +   G +  A   L
Sbjct: 526  CATTYNIMINSFGEQQRWDEVKGLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFTDAIECL 585

Query: 556  REMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKA 377
              M+SAG++P    YN LI+A+ +    + A++AF  MRADG++P  +  N+LI++  + 
Sbjct: 586  EVMKSAGMKPSPTMYNALINAYAQRGLSEQALNAFRVMRADGLKPSPLALNSLINAFGED 645

Query: 376  GRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPN 209
             R      + + MKEN  KP   TY  ++ +L   +++ ++  V   M   G  P+
Sbjct: 646  RRDTEAFSVLQYMKENDLKPDVVTYTTLMKTLIRVDKFCKVPAVYEEMIMSGCTPD 701



 Score = 69.7 bits (169), Expect = 5e-09
 Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
 Frame = -3

Query: 514 YNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRHDRGM--KLFED 341
           YN LI A  +   L+ A+    +MR DG   D V ++ +I S  ++ + D  +  KL+ +
Sbjct: 213 YNALIGACARNGDLEKALHLMSRMRQDGYRSDFVNYSLIIQSLTRSNKIDSPIMFKLYRE 272

Query: 340 MKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYTTLVDVYGKSGR 161
           ++    +     +N +I    +     +   +L  +   GL P   T   ++   G SGR
Sbjct: 273 IESESIEIDGQLFNDIIAGFAKAGEPSQAVHLLAMVQATGLSPKTATLVAVISALGNSGR 332

Query: 160 FKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGIVREHDFV 35
             +A    E M+  G++P    YNAL+  Y + G +++ + +
Sbjct: 333 VVEAEAIFEEMREGGLQPRTRAYNALLKGYVKAGQLKDAESI 374



 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 50/192 (26%), Positives = 89/192 (46%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            +P   T+N +I++     R D    +L  M+ +  LL +   YT +V    +     D  
Sbjct: 524  APCATTYNIMINSFGEQQRWDEVKGLLGKMQSQ-GLLPNIVTYTTLVDIYGKSGRFTDAI 582

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
              L V+    S  ++    + + LI A++     ++AL    V +A GL P   A+ +LI
Sbjct: 583  ECLEVMK---SAGMKPSPTMYNALINAYAQRGLSEQALNAFRVMRADGLKPSPLALNSLI 639

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            +A G + R  EA +V + ++   L+P +  Y  L+K  ++V        V+ EM   G +
Sbjct: 640  NAFGEDRRDTEAFSVLQYMKENDLKPDVVTYTTLMKTLIRVDKFCKVPAVYEEMIMSGCT 699

Query: 739  PDERTYSLLIDA 704
            PD +  ++L  A
Sbjct: 700  PDRKARAMLRSA 711


>ref|XP_011459077.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Fragaria vesca subsp. vesca]
          Length = 698

 Score =  530 bits (1364), Expect = e-147
 Identities = 252/406 (62%), Positives = 325/406 (80%)
 Frame = -3

Query: 1273 SPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPTLL 1094
            +PLT+NALI A A +G  + AL+++  MR      SD  NY+L++QSL R  +  D  ++
Sbjct: 185  TPLTYNALIGACARNGDLEKALNLMSRMRQD-GYRSDFVNYSLVIQSLNRS-NKVDSPIM 242

Query: 1093 LSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALISA 914
            L +  ++ S+++E D +LL+DLI+ F+ +  P +A+  LA+ QA GL+PK+  +V++ISA
Sbjct: 243  LKLYKEIESENVEIDGQLLNDLIVGFAKAGEPSQAMHFLAMVQASGLSPKTATLVSVISA 302

Query: 913  LGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVSPD 734
            LG+ GRV EAEA+FEE++  GLQPR RAYNALLKGYVK  SL DAE +  +MER G+SPD
Sbjct: 303  LGNAGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAASLEDAESIVSQMERSGISPD 362

Query: 733  ERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAVLR 554
            E TYSLLIDAY NAGRWES RI++KEMEA  V PNSYVF RILAS+RDRG+WQK+F VLR
Sbjct: 363  EHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLR 422

Query: 553  EMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAG 374
            EMRS+GV PDRHFYNV+ID FGK NCL HAM  F++M ++GI+PD VTWNTLID HCK+G
Sbjct: 423  EMRSSGVMPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIQPDTVTWNTLIDIHCKSG 482

Query: 373  RHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYT 194
             H R  +LFE+M+E+GC PC TT+NI+INSLGEQERW+E++ ++G+M  QGL+PN+VTYT
Sbjct: 483  HHARAEELFEEMQESGCAPCATTFNIMINSLGEQERWDEVKGLMGKMQSQGLLPNIVTYT 542

Query: 193  TLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            TLVD+YGKSGRF DA+E LE+MK+ G+KPSPTMYNAL+NAYAQRG+
Sbjct: 543  TLVDIYGKSGRFNDAIECLEIMKSAGLKPSPTMYNALINAYAQRGL 588



 Score =  147 bits (371), Expect = 2e-32
 Identities = 105/405 (25%), Positives = 184/405 (45%), Gaps = 9/405 (2%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            SP   T  ++ISA   +GR   A +I + M++   L      Y  +++  ++     D  
Sbjct: 290  SPKTATLVSVISALGNAGRVVEAEAIFEEMKEG-GLQPRTRAYNALLKGYVKAASLEDAE 348

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
               S++S +    I  D    S LI A++ +   + A  +L   +A  + P S     ++
Sbjct: 349  ---SIVSQMERSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRIL 405

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ++    G  +++  V  E+R  G+ P    YN ++  + K   L  A   F  M   G+ 
Sbjct: 406  ASYRDRGEWQKSFQVLREMRSSGVMPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIQ 465

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LID +  +G       L +EM+     P +  F  ++ S  ++  W +   +
Sbjct: 466  PDTVTWNTLIDIHCKSGHHARAEELFEEMQESGCAPCATTFNIMINSLGEQERWDEVKGL 525

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            + +M+S G+ P+   Y  L+D +GK      A++  + M++ G++P    +N LI+++ +
Sbjct: 526  MGKMQSQGLLPNIVTYTTLVDIYGKSGRFNDAIECLEIMKSAGLKPSPTMYNALINAYAQ 585

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  +  +  F  M+ +G KP     N +IN+ GE  R  E   VL  M E  + P+VVT
Sbjct: 586  RGLSELALNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDVKPDVVT 645

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVM---------KARGMKPSPTMY 92
            YTTL+    +  +F    +  E M         KAR M  S   Y
Sbjct: 646  YTTLMKALIRVDKFYKVPDVYEEMIHSRVTPDRKARAMLRSALKY 690



 Score = 65.5 bits (158), Expect = 1e-07
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
 Frame = -3

Query: 514 YNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRHDRG--MKLFED 341
           YN LI A  +   L+ A++   +MR DG   D V ++ +I S  ++ + D    +KL+++
Sbjct: 189 YNALIGACARNGDLEKALNLMSRMRQDGYRSDFVNYSLVIQSLNRSNKVDSPIMLKLYKE 248

Query: 340 MKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYTTLVDVYGKSGR 161
           ++    +      N +I    +     +    L  +   GL P   T  +++   G +GR
Sbjct: 249 IESENVEIDGQLLNDLIVGFAKAGEPSQAMHFLAMVQASGLSPKTATLVSVISALGNAGR 308

Query: 160 FKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGIVREHDFV 35
             +A    E MK  G++P    YNAL+  Y +   + + + +
Sbjct: 309 VVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAASLEDAESI 350


>ref|XP_008221147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Prunus mume]
          Length = 702

 Score =  524 bits (1349), Expect = e-146
 Identities = 254/408 (62%), Positives = 322/408 (78%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            S +PLT+NALI A A +G  + AL ++  MR +    SD  NY+LI+QSL R  +  D  
Sbjct: 189  SLTPLTYNALIGACARNGDLEKALHLMSRMR-RDGYRSDFVNYSLIIQSLSRS-NKIDSP 246

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
            ++L +  ++ S+SIE D +L +D+I  F+ +  P +A+ LLA+ QA GL+PK+  +VALI
Sbjct: 247  IMLKLYREIESESIEIDGQLYNDIIAGFAKAGEPTQAMHLLAMVQATGLSPKTATLVALI 306

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            SALG+ GRV EAEA+FEE++  GLQPR RAYNALLKGYVK   L+DAE +  +ME+ G+S
Sbjct: 307  SALGNCGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAAQLKDAESIVSQMEKSGIS 366

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PDE TYSLLIDAY NAGRWES RI++KEMEA  V PNSYVF RILAS+RDRG+WQK+F V
Sbjct: 367  PDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQV 426

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            LREM+S+GVRPDRHFYNV+ID FGK NCL H M  F++M ++GI+PD VTWNTLID HCK
Sbjct: 427  LREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERMLSEGIQPDTVTWNTLIDCHCK 486

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
            +G H R  +LFE+M ++GC PC TTYNI+INS GEQ+RW E++ +LG+M  QGL+PN+VT
Sbjct: 487  SGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVEVKGLLGKMQAQGLLPNIVT 546

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGI 56
            YTTLVD+YGKSGRF DA+E LEVMK+ G+KPSPTMYNAL+NAYAQRG+
Sbjct: 547  YTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALINAYAQRGL 594



 Score =  149 bits (375), Expect = 7e-33
 Identities = 106/405 (26%), Positives = 184/405 (45%), Gaps = 9/405 (2%)
 Frame = -3

Query: 1279 SPSPLTFNALISASALSGRPDHALSILQLMRDKFDLLSDHANYTLIVQSLLRCPDPPDPT 1100
            SP   T  ALISA    GR   A +I + M++   L      Y  +++  ++     D  
Sbjct: 296  SPKTATLVALISALGNCGRVVEAEAIFEEMKEG-GLQPRTRAYNALLKGYVKAAQLKDAE 354

Query: 1099 LLLSVLSDLNSQSIESDARLLSDLILAFSVSSNPDRALELLAVAQAQGLTPKSPAVVALI 920
               S++S +    I  D    S LI A++ +   + A  +L   +A  + P S     ++
Sbjct: 355  ---SIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRIL 411

Query: 919  SALGSEGRVEEAEAVFEEIRCEGLQPRIRAYNALLKGYVKVGSLRDAEQVFGEMERCGVS 740
            ++    G  +++  V  E++  G++P    YN ++  + K   L      F  M   G+ 
Sbjct: 412  ASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERMLSEGIQ 471

Query: 739  PDERTYSLLIDAYTNAGRWESTRILIKEMEAKEVPPNSYVFGRILASFRDRGDWQKAFAV 560
            PD  T++ LID +  +G  +    L +EM      P +  +  ++ SF ++  W +   +
Sbjct: 472  PDTVTWNTLIDCHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVEVKGL 531

Query: 559  LREMRSAGVRPDRHFYNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCK 380
            L +M++ G+ P+   Y  L+D +GK      A++  + M++ G++P    +N LI+++ +
Sbjct: 532  LGKMQAQGLLPNIVTYTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALINAYAQ 591

Query: 379  AGRHDRGMKLFEDMKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVT 200
             G  ++ +  F  M+ +G KP     N +IN+ GE  R  E   VL  M E  L P+VVT
Sbjct: 592  RGLSEQALNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVT 651

Query: 199  YTTLVDVYGKSGRFKDAVEFLEVM---------KARGMKPSPTMY 92
            YTTL+    +  +F       E M         KAR M  S   Y
Sbjct: 652  YTTLMKTLIRVDKFYKVPAVYEEMILSRCTPDRKARAMLRSALKY 696



 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
 Frame = -3

Query: 514 YNVLIDAFGKYNCLQHAMDAFDQMRADGIEPDVVTWNTLIDSHCKAGRHDRG--MKLFED 341
           YN LI A  +   L+ A+    +MR DG   D V ++ +I S  ++ + D    +KL+ +
Sbjct: 195 YNALIGACARNGDLEKALHLMSRMRRDGYRSDFVNYSLIIQSLSRSNKIDSPIMLKLYRE 254

Query: 340 MKENGCKPCRTTYNIVINSLGEQERWEELRKVLGRMTEQGLMPNVVTYTTLVDVYGKSGR 161
           ++    +     YN +I    +     +   +L  +   GL P   T   L+   G  GR
Sbjct: 255 IESESIEIDGQLYNDIIAGFAKAGEPTQAMHLLAMVQATGLSPKTATLVALISALGNCGR 314

Query: 160 FKDAVEFLEVMKARGMKPSPTMYNALVNAYAQRGIVREHDFV 35
             +A    E MK  G++P    YNAL+  Y +   +++ + +
Sbjct: 315 VVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAAQLKDAESI 356


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