BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00006300
         (976 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ...   340   1e-90
ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub...   336   1e-89
ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V sub...   333   9e-89
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub...   333   1e-88
gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]      333   1e-88
gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria ital...   331   5e-88
ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V sub...   331   5e-88
ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase V sub...   331   5e-88
ref|XP_008812396.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   330   1e-87
ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub...   324   7e-86
gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Ae...   321   6e-85
ref|XP_011469364.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   320   8e-85
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              320   8e-85
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub...   320   8e-85
ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V sub...   317   7e-84
ref|XP_008679943.1| PREDICTED: DNA-directed RNA polymerase V sub...   317   9e-84
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...   316   2e-83
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   316   2e-83
ref|XP_010238829.1| PREDICTED: DNA-directed RNA polymerase V sub...   315   3e-83
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   313   1e-82

>gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
          Length = 1673

 Score =  340 bits (872), Expect = 1e-90
 Identities = 177/323 (54%), Positives = 233/323 (72%), Gaps = 1/323 (0%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            DATSWV +  +TLKGE+A+EVVV+K A ++NGDAWR V+DACLPV+HLI+T RSIPYGIQ
Sbjct: 1066 DATSWVRNSCKTLKGEVAIEVVVEKDAVRRNGDAWRTVMDACLPVMHLINTRRSIPYGIQ 1125

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLGISCAFDQ+VQRLS  I  V+KGV+K+HL+LV N+MTCTGNLIGFNT+G+KALF
Sbjct: 1126 QLQELLGISCAFDQTVQRLSASITKVAKGVLKDHLILVANSMTCTGNLIGFNTAGYKALF 1185

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSLKVQVPFTEATL+TPMKCFERAAEKCHTD+L SVVSS  WGKHVA+GTG+ F++LW  
Sbjct: 1186 RSLKVQVPFTEATLITPMKCFERAAEKCHTDSLASVVSSCLWGKHVAIGTGSPFQILW-N 1244

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
            KQQ+A ++++GK  YD L  VR   + +    C   D++D ++  +N+++ LSPE    +
Sbjct: 1245 KQQMAENQNIGKGFYDFLELVRTSSQREAGDGC-SLDVDD-LEANENNEVCLSPE--IGF 1300

Query: 254  EKPIFDDYTETECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVAKSDNWQAWGSKEKI 75
            E+  FDD  + +   + D     G+         KSSWE +S +VA SD WQ W ++ + 
Sbjct: 1301 EELTFDDGFDVDYNLKKDVSMENGKV-------GKSSWEKISDSVAGSDRWQGWENRNQP 1353

Query: 74   CAE-NGNKSSWENVSQTVAKSDN 9
              + + +   W+N  Q      N
Sbjct: 1354 EMDVSSDWQGWDNGKQPFTDRSN 1376


>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis] gi|743822629|ref|XP_010932323.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis] gi|743822631|ref|XP_010932324.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
          Length = 1708

 Score =  336 bits (862), Expect = 1e-89
 Identities = 177/323 (54%), Positives = 230/323 (71%), Gaps = 1/323 (0%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            DATSWV +  +TLKGE+A+EVVV+K A ++NGDAWR V+DACLPVIHLI+T RSIPYGIQ
Sbjct: 1066 DATSWVRNSCKTLKGEVAIEVVVEKDAVRRNGDAWRTVIDACLPVIHLINTRRSIPYGIQ 1125

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLGISCAFDQ+VQRLS  I  V+KGV+K HL+LV N+MTCTGNLIGFNT+G+KALF
Sbjct: 1126 QLQELLGISCAFDQTVQRLSASITKVAKGVLKGHLILVANSMTCTGNLIGFNTAGYKALF 1185

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSLKVQVPFTEATL+TPMKCFERAAEKCHTD+L SVVSS  WGKHVA+GTG+ F++LW  
Sbjct: 1186 RSLKVQVPFTEATLITPMKCFERAAEKCHTDSLVSVVSSCLWGKHVAIGTGSPFQILW-N 1244

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
            KQQ+A ++++GK  YD L  VR   + +    C   D++D ++  +N+++ LSPE    +
Sbjct: 1245 KQQMAENQNIGKGFYDFLELVRTSSQREAGDGC-SLDVDD-LEVNENNEVCLSPE--IGF 1300

Query: 254  EKPIFDDYTETECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVAKSDNWQAWGSKEKI 75
            E+  FDD  + +   + D     G+          SSWE +S +VA SD WQ W ++ + 
Sbjct: 1301 EELTFDDGFDIDYNCKKDVSMENGKV-------GNSSWEKISDSVAGSDRWQGWENRNQP 1353

Query: 74   CAE-NGNKSSWENVSQTVAKSDN 9
              + +     W+N  Q      N
Sbjct: 1354 EMDMSSGWQGWDNGKQPFTDQSN 1376


>ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
            gi|659072503|ref|XP_008465867.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis melo]
            gi|659072505|ref|XP_008465874.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis melo]
          Length = 1964

 Score =  333 bits (855), Expect = 9e-89
 Identities = 170/339 (50%), Positives = 223/339 (65%), Gaps = 17/339 (5%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            D+TSW  +P R   GELAL+V ++K A ++NGDAWR VLD CLPV+HLIDT RS+PY I+
Sbjct: 1056 DSTSWQKNPSRWQDGELALDVCLEKSALKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIK 1115

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLGISCAFDQ +QRLSK + MVSKGV+ +HL+L+ N+MTCTGN+IGFN+ G+KAL 
Sbjct: 1116 QVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALS 1175

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            R+L +QVPFTEATL TP KCFE+AAEKCH D+L S+V+S SWGKHVAVGTG+ F++LW Q
Sbjct: 1176 RALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQ 1235

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
            K ++ C +D   DVY+ L  VR  +  +   ACLG ++ED M + +  ++ LSPEP S  
Sbjct: 1236 K-ELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEVEDIMVEDEYGELTLSPEPFSTS 1294

Query: 254  EKPIFDDYTETE-CRDQADSWEAWGRKDK-PCADNDKSSWE---NVSQTVAKSDN-WQAW 93
            EKP+F+D  E E C D       W +             WE   N   T +  DN W  W
Sbjct: 1295 EKPVFEDSAEFEHCLDNDPGESKWEKAPSLGAVSTGGGQWESNGNGKATKSSDDNDWSGW 1354

Query: 92   GSKEK------ICAENGNKSSWENVSQ-----TVAKSDN 9
            G K +         EN + S+W+  S      T+  +DN
Sbjct: 1355 GRKAEPDVTVTNAQENTSNSAWDTTSSWGNKATITSNDN 1393


>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha curcas]
          Length = 1980

 Score =  333 bits (854), Expect = 1e-88
 Identities = 168/323 (52%), Positives = 220/323 (68%), Gaps = 1/323 (0%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            D T+W+ +P RT KGELAL+VV++K A +++GDAWRIVLD+CLPV+HLIDTTRSIPY I+
Sbjct: 1062 DTTTWIRNPSRTQKGELALDVVIEKSAVKQSGDAWRIVLDSCLPVLHLIDTTRSIPYAIK 1121

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            QI+ LLG+SCAFDQ+VQRLS  + +V+KGV+KEHL+L+ N+MTC GNL+GFN+ G+K+L 
Sbjct: 1122 QIQELLGVSCAFDQAVQRLSTSVTIVAKGVLKEHLILLANSMTCAGNLVGFNSGGYKSLS 1181

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSL VQVPFT+ATL TP KCFERAAEKCH D L S+V+S SWGK+VAVGTG+ F+VLW +
Sbjct: 1182 RSLDVQVPFTDATLFTPRKCFERAAEKCHVDTLSSIVASCSWGKNVAVGTGSRFDVLWDK 1241

Query: 434  KQQVACSEDVGK-DVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSA 258
            K+  AC +  G  DVY+ L  VR     +   ACLG+D++D M D   DD  LSPE N  
Sbjct: 1242 KE--ACLDQEGSIDVYEFLNMVRCSANGEESTACLGADVDDLMLDDGMDDWNLSPEHNFG 1299

Query: 257  YEKPIFDDYTETECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVAKSDNWQAWGSKEK 78
             +KP F+D  E +                 C DN  + WE  S  V  S +   WG  + 
Sbjct: 1300 SDKPTFEDRAEFQ----------------NCLDNQPADWEKASYAVNGSSSGGNWGGDKN 1343

Query: 77   ICAENGNKSSWENVSQTVAKSDN 9
            +  E   ++SW    +  A++ N
Sbjct: 1344 M--ETDKENSWSGWGRNAAETQN 1364


>gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]
          Length = 1821

 Score =  333 bits (854), Expect = 1e-88
 Identities = 168/323 (52%), Positives = 220/323 (68%), Gaps = 1/323 (0%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            D T+W+ +P RT KGELAL+VV++K A +++GDAWRIVLD+CLPV+HLIDTTRSIPY I+
Sbjct: 903  DTTTWIRNPSRTQKGELALDVVIEKSAVKQSGDAWRIVLDSCLPVLHLIDTTRSIPYAIK 962

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            QI+ LLG+SCAFDQ+VQRLS  + +V+KGV+KEHL+L+ N+MTC GNL+GFN+ G+K+L 
Sbjct: 963  QIQELLGVSCAFDQAVQRLSTSVTIVAKGVLKEHLILLANSMTCAGNLVGFNSGGYKSLS 1022

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSL VQVPFT+ATL TP KCFERAAEKCH D L S+V+S SWGK+VAVGTG+ F+VLW +
Sbjct: 1023 RSLDVQVPFTDATLFTPRKCFERAAEKCHVDTLSSIVASCSWGKNVAVGTGSRFDVLWDK 1082

Query: 434  KQQVACSEDVGK-DVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSA 258
            K+  AC +  G  DVY+ L  VR     +   ACLG+D++D M D   DD  LSPE N  
Sbjct: 1083 KE--ACLDQEGSIDVYEFLNMVRCSANGEESTACLGADVDDLMLDDGMDDWNLSPEHNFG 1140

Query: 257  YEKPIFDDYTETECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVAKSDNWQAWGSKEK 78
             +KP F+D  E +                 C DN  + WE  S  V  S +   WG  + 
Sbjct: 1141 SDKPTFEDRAEFQ----------------NCLDNQPADWEKASYAVNGSSSGGNWGGDKN 1184

Query: 77   ICAENGNKSSWENVSQTVAKSDN 9
            +  E   ++SW    +  A++ N
Sbjct: 1185 M--ETDKENSWSGWGRNAAETQN 1205


>gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria italica]
          Length = 2050

 Score =  331 bits (849), Expect = 5e-88
 Identities = 171/353 (48%), Positives = 227/353 (64%), Gaps = 29/353 (8%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            +ATSWV +   TLKGE  LE++V+K  A +NG AWR V+DAC+PV++LIDT RSIPYGIQ
Sbjct: 1077 EATSWVKNTQNTLKGEPTLEIIVEKDEAVRNGYAWRTVMDACIPVLNLIDTRRSIPYGIQ 1136

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q+K LLGISCAFDQ VQRLS  ++MV+KGV+K+HL+LV N+MTCTGNLIGFNTSG+KA F
Sbjct: 1137 QVKELLGISCAFDQVVQRLSTTVKMVAKGVLKDHLILVANSMTCTGNLIGFNTSGYKATF 1196

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG VVSS SWGKH A+GTG+ F++LW +
Sbjct: 1197 RSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSCSWGKHAAIGTGSSFQILWNE 1256

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
              Q+  +++ G  +YD LA VR  QE    G     D++  +++   DD+ LSPEP+  +
Sbjct: 1257 -NQLKSNKEYGDGLYDFLALVRTDQEK--AGYAFLDDVDYLVEENAVDDVCLSPEPDGTH 1313

Query: 254  EKPIFDDYTETECRDQADSWE--------------------AWGRKDKPCA------DND 153
             KP F+D  E +      SWE                     WG      A      D D
Sbjct: 1314 GKPTFEDNVEEQGIQNGSSWENDTTMNSSWEQNASAGNDSGDWGGWSNGAAAATKPLDQD 1373

Query: 152  KSSWENVSQTVAKSDNWQAWGSKEKICAENGNKSSWENVS---QTVAKSDNWQ 3
             S W+  +     S +W  WG++++   E    ++W +     ++ A  DNW+
Sbjct: 1374 NSCWDAHATVENNSTDWGGWGTEKQTNGEQAEINTWADKGAGMESSAGDDNWE 1426


>ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
            gi|778702723|ref|XP_011655251.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis sativus]
            gi|700195913|gb|KGN51090.1| hypothetical protein
            Csa_5G435050 [Cucumis sativus]
          Length = 1963

 Score =  331 bits (849), Expect = 5e-88
 Identities = 167/334 (50%), Positives = 221/334 (66%), Gaps = 12/334 (3%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            D+TSW  +P R   GELAL+V ++K A ++NGDAWR VLD CLPV+HLIDT RS+PY I+
Sbjct: 1056 DSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIK 1115

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLGISCAFDQ +QRLSK + MVSKGV+ +HL+L+ N+MTCTGN+IGFN+ G+KAL 
Sbjct: 1116 QVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALS 1175

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            R+L +QVPFTEATL TP KCFE+AAEKCH D+L S+V+S SWGKHVAVGTG+ F++LW Q
Sbjct: 1176 RALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQ 1235

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
            K ++ C +D   DVY+ L  VR  +  +   ACLG +IED M + +  ++ LSPEP S  
Sbjct: 1236 K-ELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEIEDIMVEDEYGELTLSPEPFSTS 1294

Query: 254  EKPIFDDYTETE-CRDQADSWEAWGRKDK-PCADNDKSSWENVSQTVAKS----DNWQAW 93
            EKP+F+D  E E C D       W +             WE+     A +    ++W  W
Sbjct: 1295 EKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWESNENGKATNSSDGNDWSGW 1354

Query: 92   GSKEK------ICAENGNKSSWENVSQTVAKSDN 9
            G K +         EN + S+W+  S    K+ N
Sbjct: 1355 GRKAEPDVTVTNAQENTSNSAWDTTSSWGNKATN 1388


>ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Setaria italica]
          Length = 2038

 Score =  331 bits (849), Expect = 5e-88
 Identities = 171/353 (48%), Positives = 227/353 (64%), Gaps = 29/353 (8%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            +ATSWV +   TLKGE  LE++V+K  A +NG AWR V+DAC+PV++LIDT RSIPYGIQ
Sbjct: 1065 EATSWVKNTQNTLKGEPTLEIIVEKDEAVRNGYAWRTVMDACIPVLNLIDTRRSIPYGIQ 1124

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q+K LLGISCAFDQ VQRLS  ++MV+KGV+K+HL+LV N+MTCTGNLIGFNTSG+KA F
Sbjct: 1125 QVKELLGISCAFDQVVQRLSTTVKMVAKGVLKDHLILVANSMTCTGNLIGFNTSGYKATF 1184

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG VVSS SWGKH A+GTG+ F++LW +
Sbjct: 1185 RSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSCSWGKHAAIGTGSSFQILWNE 1244

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
              Q+  +++ G  +YD LA VR  QE    G     D++  +++   DD+ LSPEP+  +
Sbjct: 1245 -NQLKSNKEYGDGLYDFLALVRTDQEK--AGYAFLDDVDYLVEENAVDDVCLSPEPDGTH 1301

Query: 254  EKPIFDDYTETECRDQADSWE--------------------AWGRKDKPCA------DND 153
             KP F+D  E +      SWE                     WG      A      D D
Sbjct: 1302 GKPTFEDNVEEQGIQNGSSWENDTTMNSSWEQNASAGNDSGDWGGWSNGAAAATKPLDQD 1361

Query: 152  KSSWENVSQTVAKSDNWQAWGSKEKICAENGNKSSWENVS---QTVAKSDNWQ 3
             S W+  +     S +W  WG++++   E    ++W +     ++ A  DNW+
Sbjct: 1362 NSCWDAHATVENNSTDWGGWGTEKQTNGEQAEINTWADKGAGMESSAGDDNWE 1414


>ref|XP_008812396.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1-like [Phoenix dactylifera]
          Length = 1656

 Score =  330 bits (845), Expect = 1e-87
 Identities = 177/326 (54%), Positives = 234/326 (71%), Gaps = 3/326 (0%)
 Frame = -3

Query: 971  ATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQQ 792
            ATSWV +  +TLKGE+A+EVVV+K A++++GDAWR V+DACLPV+HLI+T RSIPYGIQQ
Sbjct: 1025 ATSWVRNSCKTLKGEVAVEVVVEKDASRRHGDAWRTVIDACLPVMHLINTRRSIPYGIQQ 1084

Query: 791  IKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFR 612
            ++ LLGISCAFDQ+VQRLS  I MV+KGV+K+HL+LV N+M+CTGNLIGFNT+G+K  FR
Sbjct: 1085 LQELLGISCAFDQAVQRLSASITMVAKGVLKDHLILVANSMSCTGNLIGFNTAGYKXTFR 1144

Query: 611  SLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQK 432
            SLKVQVPFTEATL+TPMKCFERAAEKCHTD+L SVVSS  WGKHVA+GTG+ F++LW  K
Sbjct: 1145 SLKVQVPFTEATLITPMKCFERAAEKCHTDSLTSVVSSCLWGKHVAIGTGSPFQILW-NK 1203

Query: 431  QQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAYE 252
            +Q+A ++++GK  YD L  VR   + +    C   D++D +   +ND++ LSPE    +E
Sbjct: 1204 RQMAENQNIGKGFYDFLELVRTSSQGEAGNGC-SVDVDD-LGVNENDEVCLSPE--IGFE 1259

Query: 251  KPIFDDYTETECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVAKSDNWQAW--GSKEK 78
            K  FDD  E +   + D     G+          SSWE +S +V  SD WQ W  G++ +
Sbjct: 1260 KLTFDDGFEVDYNLKKDISMENGKV-------GNSSWEKLSDSVVGSDRWQGWENGNQPE 1312

Query: 77   ICAENGNKSSWENVSQT-VAKSDNWQ 3
            +   +G    W+N  Q  + +SD  Q
Sbjct: 1313 MDTSSG-WQGWDNGKQPFIDRSDRSQ 1337


>ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Musa acuminata
            subsp. malaccensis] gi|695009141|ref|XP_009391190.1|
            PREDICTED: DNA-directed RNA polymerase V subunit 1 [Musa
            acuminata subsp. malaccensis]
            gi|695009143|ref|XP_009391191.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Musa acuminata subsp.
            malaccensis]
          Length = 1738

 Score =  324 bits (830), Expect = 7e-86
 Identities = 178/332 (53%), Positives = 227/332 (68%), Gaps = 10/332 (3%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            DATSWV S  +TLKG+L LEVV+ + A +++GDAWR VLDACLPV+HLIDT RSIPYGIQ
Sbjct: 1065 DATSWVGSSCKTLKGDLGLEVVLGQDAVRQSGDAWRTVLDACLPVMHLIDTGRSIPYGIQ 1124

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            QI+ +LGISCAFDQ+VQRLSK I+MVSKGV+KEHL+LV N+MTCTG LIGFNT G+KALF
Sbjct: 1125 QIQEVLGISCAFDQAVQRLSKSIKMVSKGVMKEHLLLVANSMTCTGKLIGFNTGGYKALF 1184

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RS KV+VPFT ATL TPMKCFERAAEKC  D+L SVVSS SWGK+VA+GTG  F++LW  
Sbjct: 1185 RSFKVEVPFTAATLFTPMKCFERAAEKCQVDSLASVVSSCSWGKNVAIGTGAPFQILW-D 1243

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
            K+Q+A ++D+GK VYD L  +RE    +  G  L +D+++  ++   + + LSP+ +   
Sbjct: 1244 KKQMAMNKDIGKGVYDFLELLRETSSGEATGRYL-ADVDELAEE---NGICLSPDLDGCM 1299

Query: 254  EKPIFDDYTETECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVAKSDNWQAWGSKEKI 75
                FDD  + E   Q       G+       + +SSWE V     KS NW+ WG KE  
Sbjct: 1300 ---TFDDSDDVEYNFQKRIGVVNGK-------SGESSWE-VDPVSVKSGNWEGWGDKEST 1348

Query: 74   CAENGNK--------SSWEN--VSQTVAKSDN 9
              +N           SSW++  V Q   +S+N
Sbjct: 1349 HVDNCESPATKHNVWSSWDSIQVKQKTVESEN 1380


>gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Aegilops tauschii]
          Length = 2017

 Score =  321 bits (822), Expect = 6e-85
 Identities = 166/330 (50%), Positives = 220/330 (66%), Gaps = 7/330 (2%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            DATSWV    +  KGE A+E++V+K  A +NGDAWRI +DAC+PV++LIDT RSIPYGIQ
Sbjct: 1158 DATSWVKHTKKISKGEPAVEIIVEKKEAMQNGDAWRIAMDACIPVMNLIDTQRSIPYGIQ 1217

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLGISC+FDQ VQRLSK ++ V+KG++K+HLVLV N+MTCTGNL GF+  G++A F
Sbjct: 1218 QVRELLGISCSFDQVVQRLSKTMKTVAKGILKDHLVLVANSMTCTGNLNGFHNGGYRATF 1277

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSLKVQVPFTEATLLTPMKCFE+AAEKCH+D+LGSVVSS SWGKH A+GTG+ F++LW +
Sbjct: 1278 RSLKVQVPFTEATLLTPMKCFEKAAEKCHSDSLGSVVSSCSWGKHAALGTGSSFQILWNE 1337

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
              Q+  +++ G  +YD LA VR  QE          D++  ++D   DD+ LSPE +  +
Sbjct: 1338 -NQLKSNKEYGDGLYDFLALVRTDQEK--AAYTFLDDVDYLVEDNAMDDICLSPEMDGTH 1394

Query: 254  EKPIFDDYTETECRDQADSWE-------AWGRKDKPCADNDKSSWENVSQTVAKSDNWQA 96
              P F+D  E +  ++  SWE       +W R     A ND  +W   S     S +W  
Sbjct: 1395 GMPTFEDDPEQQNTEKDSSWENGTTAGASWERNAN--AGNDSGNWGGGSTVENDSTDWAG 1452

Query: 95   WGSKEKICAENGNKSSWENVSQTVAKSDNW 6
            WG+        G  +  + VS   A+ D W
Sbjct: 1453 WGT--------GPANDKKIVSGEPAEPDTW 1474


>ref|XP_011469364.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1 [Fragaria vesca subsp. vesca]
          Length = 2012

 Score =  320 bits (821), Expect = 8e-85
 Identities = 162/334 (48%), Positives = 216/334 (64%), Gaps = 37/334 (11%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            ++T+W+ SP ++LKGELAL+VV++K   +++GDAWRI LD CLPV+HLIDT RSIPY I+
Sbjct: 1064 ESTTWIRSPNKSLKGELALDVVLEKSVVKQSGDAWRIALDCCLPVLHLIDTRRSIPYAIK 1123

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLG+SCAFDQ+VQRL+K + MV+KGV+KEHL+L+ N+MTC GN +GFN  G+KAL 
Sbjct: 1124 QVQELLGVSCAFDQAVQRLAKAVAMVAKGVLKEHLILLANSMTCAGNFVGFNPGGYKALS 1183

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            R+L +QVPFTEATL TP KCFERAAEKCH D+L S+V+S SWGKHVAVGTG+ FE+LW  
Sbjct: 1184 RALNIQVPFTEATLFTPKKCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFEILWDT 1243

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
            K+    +E  G DV++ L  V      ++  A LG++I+D + D++N D+ LSPE NS+ 
Sbjct: 1244 KEG-GLNEVGGVDVFNFLHMVNAANGEELTTAALGTEIDDLVPDYENGDVSLSPEHNSSS 1302

Query: 254  EKPIFDDYTE-------------------------------------TECRDQADSWEAW 186
            +KP+F+D  E                                          QADS  AW
Sbjct: 1303 DKPVFEDIVEFPDNFENVPGKSSWDSIYTASTGGKDWGAVKIGTQDGISAETQADSTSAW 1362

Query: 185  GRKDKPCADNDKSSWENVSQTVAKSDNWQAWGSK 84
            G K     ++D S W       A  D   AWG+K
Sbjct: 1363 GIKTP--REDDTSPWGTAK--TATEDAPSAWGTK 1392


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  320 bits (821), Expect = 8e-85
 Identities = 158/299 (52%), Positives = 218/299 (72%), Gaps = 3/299 (1%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            D T+W+ +P ++ KGELAL++V++K A ++ GDAWRIVLDACLPV+HLIDT RSIPY I+
Sbjct: 1117 DTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIK 1176

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLGISCAFDQ+VQRLSK + MV+KGV+KEHL+L+ N+MTC GNLIGFN+ G+KAL 
Sbjct: 1177 QVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALS 1236

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            R+L +QVPFTEATL TP KCFE+A+EKCHTD+L S+V+S SWGKHV VGTG+ F+VLW  
Sbjct: 1237 RALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDT 1296

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPG-ACLGSDIEDFMDDFQNDDMPLSPEPNSA 258
            K ++  ++D G D+Y  L  VR       P  ACLG+++ED + + +N ++ +SPE +S 
Sbjct: 1297 K-EIGPAQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSN 1355

Query: 257  YEKPIFDDYTETECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVA--KSDNWQAWGS 87
            +EKP+F+D  E +     ++WE       P +  D +  +N   T +  K   W +WG+
Sbjct: 1356 FEKPVFEDSAEFQ-----NTWE----NHVPGSGGDWAVNQNKETTASTLKPSAWSSWGT 1405


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
            gi|731435545|ref|XP_010645605.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  320 bits (821), Expect = 8e-85
 Identities = 158/299 (52%), Positives = 218/299 (72%), Gaps = 3/299 (1%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            D T+W+ +P ++ KGELAL++V++K A ++ GDAWRIVLDACLPV+HLIDT RSIPY I+
Sbjct: 1057 DTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIK 1116

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLGISCAFDQ+VQRLSK + MV+KGV+KEHL+L+ N+MTC GNLIGFN+ G+KAL 
Sbjct: 1117 QVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALS 1176

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            R+L +QVPFTEATL TP KCFE+A+EKCHTD+L S+V+S SWGKHV VGTG+ F+VLW  
Sbjct: 1177 RALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDT 1236

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPG-ACLGSDIEDFMDDFQNDDMPLSPEPNSA 258
            K ++  ++D G D+Y  L  VR       P  ACLG+++ED + + +N ++ +SPE +S 
Sbjct: 1237 K-EIGPAQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSN 1295

Query: 257  YEKPIFDDYTETECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVA--KSDNWQAWGS 87
            +EKP+F+D  E +     ++WE       P +  D +  +N   T +  K   W +WG+
Sbjct: 1296 FEKPVFEDSAEFQ-----NTWE----NHVPGSGGDWAVNQNKETTASTLKPSAWSSWGT 1345


>ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
            gi|720093477|ref|XP_010246064.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Nelumbo nucifera]
            gi|720093480|ref|XP_010246066.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Nelumbo nucifera]
          Length = 1908

 Score =  317 bits (813), Expect = 7e-84
 Identities = 166/338 (49%), Positives = 215/338 (63%), Gaps = 14/338 (4%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            D  SWV +P +   GEL LEVVV K A ++ GDAWR+VL++CLPVIHL+DT RSIPYGI+
Sbjct: 1062 DVCSWVRNPCKIQNGELVLEVVVDKAAVKRTGDAWRVVLNSCLPVIHLVDTRRSIPYGIK 1121

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            QI+ LLGISCAFDQ+VQRLS  +RMV+KGV+KEHL+L  N+MTCTGN+IGFN+ G+KAL 
Sbjct: 1122 QIQELLGISCAFDQAVQRLSSSVRMVTKGVLKEHLILAANSMTCTGNMIGFNSGGYKALL 1181

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSL V VPFTEATL TP KCFE+AA+KCH D+L S+V+S SWGKHV VGTG  FE+LW  
Sbjct: 1182 RSLNVHVPFTEATLFTPRKCFEKAAQKCHMDSLSSIVASCSWGKHVTVGTGAQFEILWNN 1241

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
            K ++  ++D   DVYD L  VR   E D    CLG +I+D   + +  ++ LSP  N+ +
Sbjct: 1242 K-EMGVNQDGEIDVYDFLQLVRGSNEGDSFTTCLGQEIDDLELENEERELSLSPNVNTCF 1300

Query: 254  EKPIFDDYTETECRDQADSW---------EAWGRKDKPCADNDK---SSWE-NVSQTVAK 114
             KP+FDD     C  + DSW           W + +K      +    SW+ N+ Q  A 
Sbjct: 1301 NKPVFDD---NGCLGE-DSWGKQAEKEGINGWDKNEKQPEGGQQWELHSWDTNMEQKQAS 1356

Query: 113  SDNWQ-AWGSKEKICAENGNKSSWENVSQTVAKSDNWQ 3
                   WGS E +       +    + Q+  K   W+
Sbjct: 1357 QPKGSLGWGSXEPVDWTGKEVTQGWQLKQSSVKLQTWK 1394


>ref|XP_008679943.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1932

 Score =  317 bits (812), Expect = 9e-84
 Identities = 162/312 (51%), Positives = 210/312 (67%), Gaps = 1/312 (0%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            DA SWV    +  KGE ALE++V+K  A  NGDAWR  +DACLPV++LIDT RSIPYGIQ
Sbjct: 1064 DAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQ 1123

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ L+GISCAFDQ VQRLS  ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA F
Sbjct: 1124 QVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATF 1183

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH AVGTG+ F++LW +
Sbjct: 1184 RSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE 1243

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
              Q+  +++ G  +YD LA VR  QE          D++  +++   DDM LSPEP+   
Sbjct: 1244 -NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTL 1300

Query: 254  EKPIFDDYTETECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVAKSDNWQAWGSKEKI 75
             KP F+D  E +   +  SWE              SSWE  +     S +W  W S    
Sbjct: 1301 GKPTFEDNFEEQNIQKGSSWE--------IGITTNSSWEQNASVANDSGDWGGWSSGGGA 1352

Query: 74   CAENGNK-SSWE 42
             A+  ++ +SWE
Sbjct: 1353 AAKPADQDNSWE 1364


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score =  316 bits (809), Expect = 2e-83
 Identities = 165/357 (46%), Positives = 225/357 (63%), Gaps = 34/357 (9%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            D T+W+ SP +T KGELAL+VV++K A ++NGDAWR V+D CLPVI+LIDT RSIPY I+
Sbjct: 1053 DTTTWIRSPSKTQKGELALDVVLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIK 1112

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLGISCAF+Q+VQRLS  + MV++GV+KEHL+L+ N+MTC GNLIGFN+ G+KAL 
Sbjct: 1113 QVQELLGISCAFEQAVQRLSTSVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALS 1172

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSL +QVPF+EATL TP KCFERAAEKCH D+L S+V+S SWGKHVAVGTG+ F+VLW +
Sbjct: 1173 RSLNIQVPFSEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDR 1232

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
            K +V   +  G DVY+ L  +           CLG +++D MD     +  LSPE ++  
Sbjct: 1233 K-EVGFDQKSGIDVYNFLHMLSSASGPSSTTTCLGEEVDDLMDVDNMAEWSLSPEHSNGL 1291

Query: 254  EKPIFDDYTETE----CRDQADSWEAWGRKDKPCADNDKSSWENVSQ----------TVA 117
            +KP+F+D  + E     +    SWE     DK  + N  S+W   ++          +  
Sbjct: 1292 DKPVFEDAADFENDLDFQPAESSWEKGVSLDKVSSWNVSSAWNKKAEDGDKFAAALTSTT 1351

Query: 116  KSDNWQAWGS-----------------KEKICAENGNKSSWENVSQTV---AKSDNW 6
            K  +W  WG+                 K + C    +KS  + V+ TV   A+ + W
Sbjct: 1352 KQSDWCDWGTSKSKTQDAAAAATSTTKKTEWCDWGTSKSKTQEVAATVTGTAEQNEW 1408


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  316 bits (809), Expect = 2e-83
 Identities = 165/357 (46%), Positives = 225/357 (63%), Gaps = 34/357 (9%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            D T+W+ SP +T KGELAL+VV++K A ++NGDAWR V+D CLPVI+LIDT RSIPY I+
Sbjct: 1053 DTTTWIRSPSKTQKGELALDVVLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIK 1112

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLGISCAF+Q+VQRLS  + MV++GV+KEHL+L+ N+MTC GNLIGFN+ G+KAL 
Sbjct: 1113 QVQELLGISCAFEQAVQRLSTSVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALS 1172

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSL +QVPF+EATL TP KCFERAAEKCH D+L S+V+S SWGKHVAVGTG+ F+VLW +
Sbjct: 1173 RSLNIQVPFSEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDR 1232

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
            K +V   +  G DVY+ L  +           CLG +++D MD     +  LSPE ++  
Sbjct: 1233 K-EVGFDQKSGIDVYNFLHMLSSASGPSSTTTCLGEEVDDLMDVDNMAEWSLSPEHSNGL 1291

Query: 254  EKPIFDDYTETE----CRDQADSWEAWGRKDKPCADNDKSSWENVSQ----------TVA 117
            +KP+F+D  + E     +    SWE     DK  + N  S+W   ++          +  
Sbjct: 1292 DKPVFEDAADFENDLDFQPAESSWEKGVSLDKVSSWNVSSAWNKKAEDGDKFAAALTSTT 1351

Query: 116  KSDNWQAWGS-----------------KEKICAENGNKSSWENVSQTV---AKSDNW 6
            K  +W  WG+                 K + C    +KS  + V+ TV   A+ + W
Sbjct: 1352 KQSDWCDWGTSKSKTQDAAAAATSTTKKTEWCDWGTSKSKTQEVAATVTGTAEQNEW 1408


>ref|XP_010238829.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Brachypodium
            distachyon] gi|944057016|gb|KQJ92654.1| hypothetical
            protein BRADI_4g45065 [Brachypodium distachyon]
          Length = 1954

 Score =  315 bits (807), Expect = 3e-83
 Identities = 163/330 (49%), Positives = 215/330 (65%), Gaps = 7/330 (2%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            DA SWV +  +  KGE  +E+VV+K  A K GDAWRI +DAC+PVI LIDT RSIPYGIQ
Sbjct: 1064 DAQSWVKNTRKVSKGEPTVEIVVEKNEASKQGDAWRIAMDACIPVIDLIDTRRSIPYGIQ 1123

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLGISC+FDQ VQRLS  ++ V+KG++K+HL+LV N+MTCTGNL GFNT G++A F
Sbjct: 1124 QVRELLGISCSFDQIVQRLSTTMKTVAKGILKDHLILVANSMTCTGNLYGFNTGGYRATF 1183

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            R+LKVQVPFTE+TL TPMKCFE+AAEKCH+DALG VVSS SWGKH A+GTG+ F++LW +
Sbjct: 1184 RALKVQVPFTESTLFTPMKCFEKAAEKCHSDALGCVVSSCSWGKHAALGTGSSFQILWNE 1243

Query: 434  KQQVACSEDVGKDVYDLLAWVREPQEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPNSAY 255
              Q+  +++ G  +YD LA VR  QE          D++  ++D   DD+ LSPE N  +
Sbjct: 1244 -NQLKSNKEYGDGLYDFLAMVRTDQEK--ARYTFLDDVDYLVEDNAMDDICLSPELNGTH 1300

Query: 254  EKPIFDDYTETECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVAKSDNWQAWGSKEKI 75
              P F+D  E +     +SWE   + +        +SWE  +     SDNW  W +    
Sbjct: 1301 GVPTFEDNFEHQDTQNGNSWENGTKAN--------ASWEQNASAGNDSDNWGGWSNAAAA 1352

Query: 74   C-------AENGNKSSWENVSQTVAKSDNW 6
                    A+ GN SSW+  +     S +W
Sbjct: 1353 ADTGAAKPADQGN-SSWDVPATAENDSTDW 1381


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  313 bits (802), Expect = 1e-82
 Identities = 165/350 (47%), Positives = 222/350 (63%), Gaps = 30/350 (8%)
 Frame = -3

Query: 974  DATSWVSSPGRTLKGELALEVVVQKVAAQKNGDAWRIVLDACLPVIHLIDTTRSIPYGIQ 795
            D T+W+ +P +  KGELAL+VV++K   +++GDAWR VLD+CLPV HLIDT RS+PY I+
Sbjct: 1055 DTTAWIRNPSKNRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIK 1114

Query: 794  QIKGLLGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALF 615
            Q++ LLG+SCAF+Q+VQRLS  + MV+KGV+KEHL+L+ N+MTC G+L+GFN+ G+KAL 
Sbjct: 1115 QVQELLGVSCAFEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALS 1174

Query: 614  RSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAVGTGTHFEVLWGQ 435
            RSL VQVPFTEATL TP KCFE+AAEKCHTD L SVV++ SWGKHVAVGTG+ F++LW Q
Sbjct: 1175 RSLNVQVPFTEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLW-Q 1233

Query: 434  KQQVACSEDVGKDVYDLLAWVREP---QEMDIPGACLGSDIEDFMDDFQNDDMPLSPEPN 264
             +    ++D G DVYD L  VR     +E D    CLG +++   D+F   D  LSPE N
Sbjct: 1234 TENEEFNQDDGVDVYDFLHMVRSSTGIEESDT--GCLGEEVDGLEDEF---DWSLSPEHN 1288

Query: 263  SAYEKPIFDDYTE----TECRDQADSWEAWGRKDKPCADNDKSSWENVSQTVAK-SDNWQ 99
               +KP+F+D  E     E + +  +W++    +  C  + +  WE +  ++ K S  W+
Sbjct: 1289 LCSDKPVFEDLVEDQSWLENKQENANWDS----EADCRKSSEDKWEKLGTSLEKPSSGWR 1344

Query: 98   ---AWGSKEKICAENGNKSS-------------------WENVSQTVAKS 15
               AWG       E     S                   WENV    AKS
Sbjct: 1345 TEGAWGKSSDDKLEKAGSPSRKPSGWGTEASWGESSCDKWENVGSPAAKS 1394