BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00006063
         (1775 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   176   e-112
emb|CDP17738.1| unnamed protein product [Coffea canephora]            180   5e-85
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   139   5e-84
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   139   6e-84
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           140   1e-83
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   138   2e-83
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     155   1e-75
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     154   3e-74
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   129   3e-73
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   148   5e-72
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     148   5e-72
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892...   153   2e-70
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        144   6e-70
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]           151   7e-70
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   147   1e-66
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   162   3e-63
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   156   3e-62
emb|CDP17739.1| unnamed protein product [Coffea canephora]            168   2e-61
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     126   4e-61
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   156   5e-60

>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  176 bits (445), Expect(4) = e-112
 Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            TL+EKV CM S + L + FWAEA+TYA HLVNRLPSSAIDGKTP+E+WSGK A DYD L 
Sbjct: 526  TLVEKVCCMLSNAELGREFWAEAVTYAQHLVNRLPSSAIDGKTPLEVWSGKPATDYDSLH 585

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKP 1205
            +FG  AYYHV + KL+PRA+KA+F+GF  GVKG++LW  E KK ++SRDVTFDE  M+K 
Sbjct: 586  VFGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYRLWCLEKKKTIISRDVTFDESVMLKK 645

Query: 1206 QSSKQVEDS--QSKEISQKVEFDVPPQSLENSVSVEIPT-EVTLDIDQAEDQSVGQTDES 1376
             + +  + +  Q + + ++VEF+          +V IPT   T D   AE++S    DE 
Sbjct: 646  VNPEGTDSTPQQVECVRKQVEFE---------PTVVIPTRNTTSDSPMAEEES----DEE 692

Query: 1377 E 1379
            E
Sbjct: 693  E 693



 Score =  111 bits (277), Expect(4) = e-112
 Identities = 61/121 (50%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
 Frame = +2

Query: 1388 EDTEIPEGPDQGQGHVQDSIAAHKPKRHTRRPAKYDDMILAYALPVEVIEDSIPSTYREA 1567
            E+++  E P Q        IA  + +R  ++PA++ DM+ AYALPV    D IPSTY   
Sbjct: 687  EESDEEEVPTQESQQQSAPIAVRRQRRDIQKPARFMDMV-AYALPVV---DDIPSTYPGV 742

Query: 1568 ELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYVKEGSLS--EGVRFKA 1741
             LSSES  W  AMEEEM+SL+KN TW+L +LP GKKA+GCKWV+ K+   S  E VR+KA
Sbjct: 743  ILSSESGNWAGAMEEEMQSLKKNKTWKLTQLPKGKKAIGCKWVFAKKEKFSNKEDVRYKA 802

Query: 1742 R 1744
            R
Sbjct: 803  R 803



 Score =  102 bits (255), Expect(4) = e-112
 Identities = 51/108 (47%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQL-K 299
           Y +CP R+    F+++D GVV M ND+ C   GIG+++++  DG  R + DVRYVP+L K
Sbjct: 232 YHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKK 291

Query: 300 NLLSLGDLESQEHKITMESGVLRVIKGLLVVMKGIRDMNLYFLRGSTV 443
           NL+SLG LES+   +TM  G+L+   G LV++KG+   NLY+ +GSTV
Sbjct: 292 NLISLGALESKGLVVTMRDGILKATLGALVMLKGVMKNNLYYYQGSTV 339



 Score = 87.8 bits (216), Expect(4) = e-112
 Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 16/150 (10%)
 Frame = +2

Query: 443 LLKQGVLSGA*TCK--------------VKFSTDIHRTEGLLNYVHTDVWVLPRIHHLVG 580
           L KQG+L G   CK              VKF T IH T+G+L+YVH+DVW   +   + G
Sbjct: 375 LTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGG 434

Query: 581 PTTLSXXXXXXPGAIRC-TP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDNGDEHNSDS 757
                         +   T  + + +  ++L  K +VE  T R+IK L++DNG E+ SD 
Sbjct: 435 RHYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKWKAEVENHTGRKIKVLQTDNGGEYKSDP 494

Query: 758 FLQLC*DEGIERHFTVRET-QQNRVVERLN 844
           FL +C D GI RHFTVR+T QQN V ER+N
Sbjct: 495 FLNVCQDCGIVRHFTVRKTPQQNGVSERMN 524


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  180 bits (456), Expect(3) = 5e-85
 Identities = 96/179 (53%), Positives = 124/179 (69%), Gaps = 1/179 (0%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            TL+EKVRCM S +GL + FWAEA+TYA HLVNRLPSSAI GKTP+E+WSGK+A DYD LR
Sbjct: 612  TLVEKVRCMLSNAGLGRKFWAEAVTYAQHLVNRLPSSAIGGKTPLEVWSGKLATDYDSLR 671

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKP 1205
            IF   AYYHV++ KL+PRA+KA+F+GF +GVKG++LW  E+KK ++SRDVTFDE  M+  
Sbjct: 672  IFDSTAYYHVNESKLDPRAKKALFMGFSAGVKGYRLWYLEAKKTIISRDVTFDESVML-- 729

Query: 1206 QSSKQVEDSQSKEISQKVEFDVPPQSLENSVSVEIPTEVTL-DIDQAEDQSVGQTDESE 1379
              +K  +D  S    Q    +  P+ +E    V  P   T+ D   AE++S    DE E
Sbjct: 730  --NKITQDGTSGTPQQ---VECTPKQVEFEQIVVSPANSTISDSPMAEEES----DEEE 779



 Score = 99.8 bits (247), Expect(3) = 5e-85
 Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQLK- 299
           Y + P RE    FE++D G V M ND+ C   GIG+++++  DG  R + DVRYVP LK 
Sbjct: 317 YHMTPMREWFFEFEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKR 376

Query: 300 NLLSLGDLESQEHKITMESGVLRVIKGLLVVMKGIRDMNLYFLRGSTV 443
           +L+SLG LES+  ++ M  G+L+V  G L+++KG+R  NLY+ +GSTV
Sbjct: 377 SLISLGLLESKGLEVRMRDGILKVTSGALLMLKGVRKNNLYYYQGSTV 424



 Score = 86.7 bits (213), Expect(3) = 5e-85
 Identities = 60/153 (39%), Positives = 80/153 (52%), Gaps = 16/153 (10%)
 Frame = +2

Query: 434 IHSLLKQGVLSGA*TCK--------------VKFSTDIHRTEGLLNYVHTDVWVLPRIHH 571
           + +L KQG+L G   CK              VKF T IH T+G+L+YVH+DVW   +   
Sbjct: 458 LQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPS 517

Query: 572 LVGPTTLSXXXXXXPGAIRC-TP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDNGDEHN 748
           L G              +   T  S   M  ++L  K +VE QT R+IK LR+DNG E+ 
Sbjct: 518 LGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKARVENQTGRKIKILRTDNGGEYK 577

Query: 749 SDSFLQLC*DEGIERHFTVRE-TQQNRVVERLN 844
           SD F ++C + GI RHF VR+  QQN V E +N
Sbjct: 578 SDPFQKICQECGIVRHFIVRKIPQQNGVSEHMN 610


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  139 bits (351), Expect(4) = 5e-84
 Identities = 76/181 (41%), Positives = 111/181 (61%), Gaps = 1/181 (0%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            T++ + RCM S + + K FWAEA + A +L+NR PS  ++ KTP+E+WSG  AD Y +L+
Sbjct: 594  TIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGTPAD-YSQLK 652

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKP 1205
            +FGC AY HV +GKL PRA K +FLG+ SGVKG+KLW+PE+ K  MSR V F+E  M   
Sbjct: 653  VFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMF-- 710

Query: 1206 QSSKQVEDSQSKEISQKVEFDVPPQSLENSVSVE-IPTEVTLDIDQAEDQSVGQTDESEP 1382
             +S   E    KE+ Q++   V     +  V VE +  +   + D A+D +     ++ P
Sbjct: 711  TNSLPSEHVPEKEL-QRMHMQVEHVDDDTGVQVEPVHEQDDHNNDVADDDAHDDVQQTPP 769

Query: 1383 V 1385
            +
Sbjct: 770  I 770



 Score = 90.9 bits (224), Expect(4) = 5e-84
 Identities = 53/117 (45%), Positives = 75/117 (64%), Gaps = 8/117 (6%)
 Frame = +2

Query: 1445 IAAHKPKRHTRRPAKY-DDMILAY-----ALPVEVIEDSIPSTYREAELSSESDRWRVAM 1606
            IA  K KR T+ P +  ++  L+Y     A  VE + +  P+TY+EA    +S+ W  AM
Sbjct: 779  IAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHE--PATYKEAVRCGDSENWISAM 836

Query: 1607 EEEMRSLQKNDTWELAKLPSGKKAVGCKWVYV-KEG-SLSEGVRFKARLVAKGYAQL 1771
             EEM+SL+KN TWE+  LP  KK + CKW++  KEG S SE  ++KARLVA+GY+Q+
Sbjct: 837  HEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQI 893



 Score = 83.2 bits (204), Expect(4) = 5e-84
 Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSG-VVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQL- 296
           + +C +R   S ++ +  G VV M +D+ C + GIG+V+IK  DG+ R + +VRY+P + 
Sbjct: 298 FHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMS 357

Query: 297 KNLLSLGDLESQEHKITMESGVLRVIKGLLVVMKG-IRDMNLYFLRGSTV 443
           +NL+SL  L+++ +K +   GVL+V KG LV +KG +    LY LRG T+
Sbjct: 358 RNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDVNSAKLYVLRGCTL 407



 Score = 70.5 bits (171), Expect(4) = 5e-84
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
 Frame = +2

Query: 431 GIHSLLKQGVLSGA*TCKVKF--------------STDIHRTEGLLNYVHTDVWVLPRIH 568
           G+  L+K+ +L G  + K+KF              +T +H T+G L+YVH D+W   +  
Sbjct: 439 GMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKP 498

Query: 569 HLVGPTTL-----SXXXXXXPGAIRCTP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDN 733
            L G   +            P  ++    + +       W K  +E QT+R++K LR+DN
Sbjct: 499 SLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFK---NW-KVMIERQTERKVKLLRTDN 554

Query: 734 GDEHNSDSFLQLC*DEGIERHFTVRET-QQNRVVERLN 844
           G E  S +F   C  EGI RH T+  T QQN V ER+N
Sbjct: 555 GGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMN 592


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  139 bits (351), Expect(4) = 6e-84
 Identities = 76/181 (41%), Positives = 111/181 (61%), Gaps = 1/181 (0%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            T++ + RCM S + + K FWAEA + A +L+NR PS  ++ KTP+E+WSG  AD Y +L+
Sbjct: 594  TIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGMPAD-YSQLK 652

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKP 1205
            +FGC AY HV +GKL PRA K +FLG+ SGVKG+KLW+PE+ K  MSR V F+E  M   
Sbjct: 653  VFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMF-- 710

Query: 1206 QSSKQVEDSQSKEISQKVEFDVPPQSLENSVSVE-IPTEVTLDIDQAEDQSVGQTDESEP 1382
             +S   E    KE+ Q++   V     +  V VE +  +   + D A+D +     ++ P
Sbjct: 711  TNSLPSEHVPEKEL-QRMHMQVEHVDDDTGVQVEPVHEQDDHNNDVADDDAHDDVQQTPP 769

Query: 1383 V 1385
            +
Sbjct: 770  I 770



 Score = 90.9 bits (224), Expect(4) = 6e-84
 Identities = 53/117 (45%), Positives = 75/117 (64%), Gaps = 8/117 (6%)
 Frame = +2

Query: 1445 IAAHKPKRHTRRPAKY-DDMILAY-----ALPVEVIEDSIPSTYREAELSSESDRWRVAM 1606
            IA  K KR T+ P +  ++  L+Y     A  VE + +  P+TY+EA    +S+ W  AM
Sbjct: 779  IAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHE--PATYKEAVRCGDSENWISAM 836

Query: 1607 EEEMRSLQKNDTWELAKLPSGKKAVGCKWVYV-KEG-SLSEGVRFKARLVAKGYAQL 1771
             EEM+SL+KN TWE+  LP  KK + CKW++  KEG S SE  ++KARLVA+GY+Q+
Sbjct: 837  HEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQI 893



 Score = 82.8 bits (203), Expect(4) = 6e-84
 Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSG-VVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQL- 296
           + +C +R   S ++ +  G VV M +D+ C + GIG+V+IK  DG+ R + +VRY+P + 
Sbjct: 298 FHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMS 357

Query: 297 KNLLSLGDLESQEHKITMESGVLRVIKGLLVVMKG-IRDMNLYFLRGSTV 443
           +NL+SL  L+++ +K +   GVL+V KG LV +KG +    LY LRG T+
Sbjct: 358 RNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTL 407



 Score = 70.5 bits (171), Expect(4) = 6e-84
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
 Frame = +2

Query: 431 GIHSLLKQGVLSGA*TCKVKF--------------STDIHRTEGLLNYVHTDVWVLPRIH 568
           G+  L+K+ +L G  + K+KF              +T +H T+G L+YVH D+W   +  
Sbjct: 439 GMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKP 498

Query: 569 HLVGPTTL-----SXXXXXXPGAIRCTP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDN 733
            L G   +            P  ++    + +       W K  +E QT+R++K LR+DN
Sbjct: 499 SLGGARYMLTVIDDYSRKVWPYFLKHKDDTFTAFK---NW-KVMIERQTERKVKLLRTDN 554

Query: 734 GDEHNSDSFLQLC*DEGIERHFTVRET-QQNRVVERLN 844
           G E  S +F   C  EGI RH T+  T QQN V ER+N
Sbjct: 555 GGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMN 592


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  140 bits (352), Expect(4) = 1e-83
 Identities = 76/181 (41%), Positives = 111/181 (61%), Gaps = 1/181 (0%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            T++ + RCM S + + K FWAEA + A +L+NR PS  ++ KTP+E+WSG  AD Y +L+
Sbjct: 596  TIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGTPAD-YSQLK 654

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKP 1205
            +FGC AY HV +GKL PRA K +FLG+ SGVKG+KLW+PE+ K  MSR V F+E  M   
Sbjct: 655  VFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMF-- 712

Query: 1206 QSSKQVEDSQSKEISQKVEFDVPPQSLENSVSVE-IPTEVTLDIDQAEDQSVGQTDESEP 1382
             +S   E    KE+ Q++   V     +  V VE +  +   + D A+D +     ++ P
Sbjct: 713  TNSLPSEHVPEKEL-QRMHMQVEHVDDDTGVQVEPVDEQDDHNNDVADDDAHDDVQQTPP 771

Query: 1383 V 1385
            +
Sbjct: 772  I 772



 Score = 93.2 bits (230), Expect(4) = 1e-83
 Identities = 52/118 (44%), Positives = 76/118 (64%), Gaps = 8/118 (6%)
 Frame = +2

Query: 1442 SIAAHKPKRHTRRPAKY-DDMILAY-----ALPVEVIEDSIPSTYREAELSSESDRWRVA 1603
            SIA  K KR T+ P +  ++  L+Y     A  VE + +  P+TY+EA    +S+ W  A
Sbjct: 780  SIAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHE--PATYKEAVRCGDSENWISA 837

Query: 1604 MEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYVKEG--SLSEGVRFKARLVAKGYAQL 1771
            M EEM+SL+KN TWE+  LP  KK + CKW++ ++   SLSE  ++KARLVA+GY+Q+
Sbjct: 838  MHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEALSLSEPPKYKARLVARGYSQI 895



 Score = 82.8 bits (203), Expect(4) = 1e-83
 Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSG-VVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQL- 296
           + +C +R   S ++ +  G VV M +D+ C + GIG+V+IK  DG+ R + +VRY+P + 
Sbjct: 300 FHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMS 359

Query: 297 KNLLSLGDLESQEHKITMESGVLRVIKGLLVVMKG-IRDMNLYFLRGSTV 443
           +NL+SL  L+++ +K +   GVL+V KG LV +KG +    LY LRG T+
Sbjct: 360 RNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTL 409



 Score = 66.6 bits (161), Expect(4) = 1e-83
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
 Frame = +2

Query: 431 GIHSLLKQGVLSGA*TCKVKF--------------STDIHRTEGLLNYVHTDVWVLPRIH 568
           G+  L+K+ +L G  + K+KF              +T +H T+G L+YVH D+W   +  
Sbjct: 441 GMTELMKRNLLKGYTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKP 500

Query: 569 HLVGPTTL-----SXXXXXXPGAIRCTP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDN 733
            L G   +            P  ++    + +       W K  +E QT+R++K L +DN
Sbjct: 501 SLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFK---NW-KVMIERQTERKVKLLCTDN 556

Query: 734 GDEHNSDSFLQLC*DEGIERHFTVRET-QQNRVVERLN 844
           G E  S +F   C  EGI RH T+  T QQN V ER+N
Sbjct: 557 GGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMN 594


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  138 bits (347), Expect(4) = 2e-83
 Identities = 76/181 (41%), Positives = 110/181 (60%), Gaps = 1/181 (0%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            T++ + RCM S + + K FWAEA + A +L+NR PS  ++ KTP+E+WSG  AD Y +L+
Sbjct: 594  TIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGTPAD-YSQLK 652

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKP 1205
            +FGC AY HV +GKL PRA K +FLG+ SGVKG+KLW+PE+ K  MSR V F+E  M   
Sbjct: 653  VFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMF-- 710

Query: 1206 QSSKQVEDSQSKEISQKVEFDVPPQSLENSVSVE-IPTEVTLDIDQAEDQSVGQTDESEP 1382
             +S   E    KE+ Q++   V        V VE +  +   + D A+D +     ++ P
Sbjct: 711  TNSLPSEHVPEKEL-QRMHMQVEHVDDYTGVQVEPVHEQDDHNNDVADDDAHDDVQQTPP 769

Query: 1383 V 1385
            +
Sbjct: 770  I 770



 Score = 90.9 bits (224), Expect(4) = 2e-83
 Identities = 53/117 (45%), Positives = 75/117 (64%), Gaps = 8/117 (6%)
 Frame = +2

Query: 1445 IAAHKPKRHTRRPAKY-DDMILAY-----ALPVEVIEDSIPSTYREAELSSESDRWRVAM 1606
            IA  K KR T+ P +  ++  L+Y     A  VE + +  P+TY+EA    +S+ W  AM
Sbjct: 779  IAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHE--PATYKEAVRCGDSENWISAM 836

Query: 1607 EEEMRSLQKNDTWELAKLPSGKKAVGCKWVYV-KEG-SLSEGVRFKARLVAKGYAQL 1771
             EEM+SL+KN TWE+  LP  KK + CKW++  KEG S SE  ++KARLVA+GY+Q+
Sbjct: 837  HEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQI 893



 Score = 82.8 bits (203), Expect(4) = 2e-83
 Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSG-VVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQL- 296
           + +C +R   S ++ +  G VV M +D+ C + GIG+V+IK  DG+ R + +VRY+P + 
Sbjct: 298 FHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMS 357

Query: 297 KNLLSLGDLESQEHKITMESGVLRVIKGLLVVMKG-IRDMNLYFLRGSTV 443
           +NL+SL  L+++ +K +   GVL+V KG LV +KG +    LY LRG T+
Sbjct: 358 RNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTL 407



 Score = 70.5 bits (171), Expect(4) = 2e-83
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
 Frame = +2

Query: 431 GIHSLLKQGVLSGA*TCKVKF--------------STDIHRTEGLLNYVHTDVWVLPRIH 568
           G+  L+K+ +L G  + K+KF              +T +H T+G L+YVH D+W   +  
Sbjct: 439 GMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKP 498

Query: 569 HLVGPTTL-----SXXXXXXPGAIRCTP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDN 733
            L G   +            P  ++    + +       W K  +E QT+R++K LR+DN
Sbjct: 499 SLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFK---NW-KVMIERQTERKVKLLRTDN 554

Query: 734 GDEHNSDSFLQLC*DEGIERHFTVRET-QQNRVVERLN 844
           G E  S +F   C  EGI RH T+  T QQN V ER+N
Sbjct: 555 GGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMN 592


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  155 bits (392), Expect(3) = 1e-75
 Identities = 74/139 (53%), Positives = 99/139 (71%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            T++ K RCM S + LPK FWAEA++ A +L+NR PS AID KTP+E+WSG  A+ Y  LR
Sbjct: 511  TIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPAN-YSDLR 569

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKP 1205
            +FGC AY HV +GKL PR  K +FLG+ SGVKG+KLW PE+KK+V+SR+V F E  M+  
Sbjct: 570  VFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIMLHD 629

Query: 1206 QSSKQVEDSQSKEISQKVE 1262
            + S  V     +++S +VE
Sbjct: 630  KPSTNVPVESQEKVSVQVE 648



 Score =  108 bits (271), Expect(3) = 1e-75
 Identities = 64/139 (46%), Positives = 90/139 (64%), Gaps = 8/139 (5%)
 Frame = +2

Query: 1379 ASGEDTEIPEGPDQG--QGHVQDSIAAHKPKRHTRRPAKY--DDMILAYALPV--EVIED 1540
            A  +D  + E  D    Q   + SIA  +PKR+T+ P +Y  +  I+AYAL V  E+  +
Sbjct: 663  AINQDAPVIEDSDSSIVQQSPKRSIAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGN 722

Query: 1541 SIPSTYREAELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYV-KEG-S 1714
            + PSTY +A +S + +RW  AM +EM SL+KN +WEL KLP  KK + CKW++  KEG S
Sbjct: 723  AEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMS 782

Query: 1715 LSEGVRFKARLVAKGYAQL 1771
             S+  R+KARLVAKGY+Q+
Sbjct: 783  PSDEARYKARLVAKGYSQI 801



 Score = 70.9 bits (172), Expect(3) = 1e-75
 Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
 Frame = +2

Query: 482 KVKFSTDIHRTEGLLNYVHTDVWVLPRIHHLVGPTTLSXXXXXXPGAI--RCTP*SISMM 655
           +VKF+T  H TEG+L+YVH+D+W   R     G   +          +            
Sbjct: 387 RVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAF 446

Query: 656 S*MYLWNKKKVELQTDRRIKKLRSDNGDEHNSDSFLQLC*DEGIERHFTVRET-QQNRVV 832
                W K  VE QT+R++K LR+DNG E  S  F   C  EGI RH+TV  T QQN V 
Sbjct: 447 DVFKEW-KTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVA 505

Query: 833 ERLN 844
           ER+N
Sbjct: 506 ERMN 509



 Score = 97.8 bits (242), Expect = 3e-17
 Identities = 52/112 (46%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQLK- 299
           Y +CP R+  + +E +  G V+M +D  C V GIGTV+IKM DG +R + DVR++P LK 
Sbjct: 217 YHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKR 276

Query: 300 NLLSLGDLESQEHKITMESGVLRVIKGLLVVMKG-IRDMNLYFLRGSTVC*N 452
           +L+SL  L+ + +K +   G+L+V KG LVVMK  I+  NLY LRG+T+  N
Sbjct: 277 SLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGN 328


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  154 bits (388), Expect(3) = 3e-74
 Identities = 73/139 (52%), Positives = 98/139 (70%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            T++ K RCM S +GLPK FWAEA++ A +L+NR P  AID KTP+E+WSG    +Y  LR
Sbjct: 574  TIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIEVWSGS-PTNYSDLR 632

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKP 1205
            +FGC AY HV +GKL PRA K +FLG+ SGVKG+KLW PE+KK+V+SR+V F E  ++  
Sbjct: 633  VFGCTAYAHVDNGKLEPRAIKCIFLGYASGVKGYKLWCPETKKVVISRNVVFHESVILHD 692

Query: 1206 QSSKQVEDSQSKEISQKVE 1262
            + S  V     ++ S +VE
Sbjct: 693  KPSTNVPVESQEKASVQVE 711



 Score =  110 bits (275), Expect(3) = 3e-74
 Identities = 68/139 (48%), Positives = 88/139 (63%), Gaps = 8/139 (5%)
 Frame = +2

Query: 1379 ASGEDTEIPEGPDQGQGHVQD--SIAAHKPKRHTRRPAKY--DDMILAYALPV-EVIEDS 1543
            A  +D  + E  D    H     SIA  KPKR+ + P +Y  +  I+AYAL V E IE +
Sbjct: 726  AINQDAPVIEDSDSSIVHQSPKRSIAKDKPKRNIKPPRRYIEEAKIVAYALSVAEKIEGN 785

Query: 1544 I-PSTYREAELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYV-KEG-S 1714
              PSTY EA +S + +RW  AM +EM SL+KN TWEL KLP  KK + CKW++  KEG S
Sbjct: 786  AEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMS 845

Query: 1715 LSEGVRFKARLVAKGYAQL 1771
             S+  R+KARLVAKGY+Q+
Sbjct: 846  PSDEARYKARLVAKGYSQI 864



 Score = 65.9 bits (159), Expect(3) = 3e-74
 Identities = 48/138 (34%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
 Frame = +2

Query: 482 KVKFSTDIHRTEGLLNYVHTDVW----------------VLPRIHHLVGPTTLSXXXXXX 613
           +VKF+T  H TEG+L+YVH+D+W                ++      V P  L       
Sbjct: 450 RVKFNTSTHTTEGILDYVHSDLWGPAHKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAF 509

Query: 614 PGAIRCTP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDNGDEHNSDSFLQLC*DEGIER 793
            G                 W K  VE QT+R++K LR+DNG E  S  F   C  EGI  
Sbjct: 510 DGFKE--------------W-KTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVC 554

Query: 794 HFTVRET-QQNRVVERLN 844
           H+T   T QQN V ER+N
Sbjct: 555 HYTAPHTPQQNDVAERMN 572



 Score = 77.0 bits (188), Expect = 5e-11
 Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
 Frame = +3

Query: 159 FEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQLK-NLLSLGDLESQE 335
           +E +  G V+M +D  C V GIGTV+IKM DG +R + DV+++P LK +L+SL       
Sbjct: 305 YEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVQHIPNLKRSLISL------- 357

Query: 336 HKITMESGVLRVIKGLLVVMK-GIRDMNLYFLRGSTVC*N 452
                  G+L+V KG LVVMK  I+  NLY LRG+T+  N
Sbjct: 358 ------YGILKVTKGSLVVMKVDIKSANLYHLRGTTILGN 391


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  129 bits (323), Expect(4) = 3e-73
 Identities = 66/138 (47%), Positives = 88/138 (63%), Gaps = 2/138 (1%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            T++ KVRCM S+SGL K FWAEA + A  L+N+ PSS+I+   P E W+G    DY  L+
Sbjct: 595  TIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEEKWTGH-PPDYKILK 653

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMK- 1202
             FG  AY H   GKLNPRA+K +FLG+  GVK FK+W  E +K V+SRD+ F E+ M K 
Sbjct: 654  KFGSVAYIHSDQGKLNPRAKKGIFLGYPDGVKRFKVWLLEDRKCVVSRDIVFQENQMYKE 713

Query: 1203 -PQSSKQVEDSQSKEISQ 1253
              ++    ED Q  E+ +
Sbjct: 714  LQKNDMSEEDKQLTEVER 731



 Score = 94.4 bits (233), Expect(4) = 3e-73
 Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 9/165 (5%)
 Frame = +2

Query: 1307 DSYRGNTGHRSSRGPVSRTNR*VRASGEDTEIPEGPDQGQGHVQDSIAAHKPKRHTRRPA 1486
            D  +   G  S++   S T    R++ +D ++ E            +A  + +R  R P 
Sbjct: 743  DENQSEGGDNSNQEQASTT----RSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQ 798

Query: 1487 KY---DDMILAYALPV----EVIEDSIPSTYREAELSSESDRWRVAMEEEMRSLQKNDTW 1645
            ++   DD ++ +AL +    EV E   P TY EA  S E ++W+ A  EEM S++KNDTW
Sbjct: 799  RFVEEDDSLVGFALTMTEDGEVYE---PETYEEAMRSPECEKWKQATIEEMDSMKKNDTW 855

Query: 1646 ELAKLPSGKKAVGCKWVYVKEGSLS--EGVRFKARLVAKGYAQLE 1774
            ++   P GK+ +GCKW++ ++  +   E  R+KARLVAKG++Q E
Sbjct: 856  DVIDKPEGKRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQRE 900



 Score = 76.3 bits (186), Expect(4) = 3e-73
 Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = +3

Query: 138 RRE*LSCFEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQL-KNLLSL 314
           R++ +  F++  SG V M ND    V+GIG VRIK  DG    + DVRY+P++ KNL+SL
Sbjct: 325 RKDWIIDFKETASGKVRMGNDTYSEVKGIGDVRIKNEDGSTILLTDVRYIPEMSKNLISL 384

Query: 315 GDLESQEHKITMESGVLRVIKGLLVVMKGIRDMNLYFLRGSTV 443
           G LE +      + G+L + K  L V+ G ++  LYFL+G+T+
Sbjct: 385 GTLEDKGCWFESKKGILTIFKNDLTVLTGKKESTLYFLQGTTL 427



 Score = 48.5 bits (114), Expect(4) = 3e-73
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
 Frame = +2

Query: 431 GIHSLLKQGVLSGA*TCKVKFSTDIHRTEGLLNYVHTDVWVLPRIHHLVGPTTL------ 592
           G+  L+ +G L       + F    H T+  L+YVH+D+W    +   +G          
Sbjct: 455 GLQVLVSKGHLDK--NIMISFGAAKHVTKDKLDYVHSDLWGSTNVPFSIGKCQYFITFID 512

Query: 593 SXXXXXXPGAIRCTP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDNGDEHNSDSFLQLC 772
                     IR    + S     ++  K ++E Q D+++K L +DNG E  +  F   C
Sbjct: 513 DFTRRTWIYFIRTKDEAFSK----FVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFC 568

Query: 773 *DEGIERHFTVRET-QQNRVVERLN 844
             EG+ RH T   T QQN V ER+N
Sbjct: 569 RKEGVIRHRTCAYTPQQNGVAERMN 593


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  148 bits (373), Expect(3) = 5e-72
 Identities = 71/138 (51%), Positives = 96/138 (69%)
 Frame = +3

Query: 849  LLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLRI 1028
            ++ K RCM S + LPK FWAEA++   +L+NR PS A D KTP+E+WSG  A+ Y  LR+
Sbjct: 638  IISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPAN-YSDLRV 696

Query: 1029 FGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKPQ 1208
            FGC AY HV +GKL PRA K +FLG+ SGVKG+KLW PE+KK+V+SR+V F E  ++  +
Sbjct: 697  FGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDK 756

Query: 1209 SSKQVEDSQSKEISQKVE 1262
             S  V     ++ S +VE
Sbjct: 757  PSTNVPVESQEKASVQVE 774



 Score =  108 bits (271), Expect(3) = 5e-72
 Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 8/139 (5%)
 Frame = +2

Query: 1379 ASGEDTEIPEGPDQG--QGHVQDSIAAHKPKRHTRRPAKY--DDMILAYALPV--EVIED 1540
            A  +D  + E  D    Q   + SIA  KPKR+ + P +Y  +  I+AYAL V  E+  +
Sbjct: 789  AINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGN 848

Query: 1541 SIPSTYREAELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYV-KEG-S 1714
            + PSTY EA +S + +RW  AM +EM SL+KN TWE  KLP  KK + CKW++  KEG S
Sbjct: 849  AEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMS 908

Query: 1715 LSEGVRFKARLVAKGYAQL 1771
             S+  R+KARLVAKGY+Q+
Sbjct: 909  PSDEARYKARLVAKGYSQI 927



 Score = 65.9 bits (159), Expect(3) = 5e-72
 Identities = 49/138 (35%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
 Frame = +2

Query: 482 KVKFSTDIHRTEGLLNYVHTDVWVLPRIHHLVGPTTLSXXXXXXPGAIRCTP*SISMMS* 661
           +VKF+T  H TEG+L+YVH+D+W         GP   +       G  R     +   S 
Sbjct: 513 RVKFNTSTHTTEGILDYVHSDLW---------GPACKTSF-----GGARYMMTIVDDYS- 557

Query: 662 MYLWN----------------KKKVELQTDRRIKKLRSDNGDEHNSDSFLQLC*DEGIER 793
             +W                 K  VE QT++++K LR+DNG E  S  F   C  EGI  
Sbjct: 558 RKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVH 617

Query: 794 HFTVRET-QQNRVVERLN 844
           H+TV  T QQN V ER+N
Sbjct: 618 HYTVPHTPQQNGVAERMN 635



 Score =  100 bits (248), Expect = 6e-18
 Identities = 52/112 (46%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQLK- 299
           Y +CP R+  + +E +  G V+M +D  C V GIGTV+IKM DG +R + DVR++P LK 
Sbjct: 343 YHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKR 402

Query: 300 NLLSLGDLESQEHKITMESGVLRVIKGLLVVMKG-IRDMNLYFLRGSTVC*N 452
           +L+SL  L+ + +K +   G+L+V KG LVVMK  I+  NLY LRG+T+  N
Sbjct: 403 SLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 454


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  148 bits (373), Expect(3) = 5e-72
 Identities = 71/138 (51%), Positives = 96/138 (69%)
 Frame = +3

Query: 849  LLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLRI 1028
            ++ K RCM S + LPK FWAEA++   +L+NR PS A D KTP+E+WSG  A+ Y  LR+
Sbjct: 638  IISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPAN-YSDLRV 696

Query: 1029 FGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKPQ 1208
            FGC AY HV +GKL PRA K +FLG+ SGVKG+KLW PE+KK+V+SR+V F E  ++  +
Sbjct: 697  FGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDK 756

Query: 1209 SSKQVEDSQSKEISQKVE 1262
             S  V     ++ S +VE
Sbjct: 757  PSTNVPVESQEKASVQVE 774



 Score =  108 bits (271), Expect(3) = 5e-72
 Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 8/139 (5%)
 Frame = +2

Query: 1379 ASGEDTEIPEGPDQG--QGHVQDSIAAHKPKRHTRRPAKY--DDMILAYALPV--EVIED 1540
            A  +D  + E  D    Q   + SIA  KPKR+ + P +Y  +  I+AYAL V  E+  +
Sbjct: 789  AINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGN 848

Query: 1541 SIPSTYREAELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYV-KEG-S 1714
            + PSTY EA +S + +RW  AM +EM SL+KN TWE  KLP  KK + CKW++  KEG S
Sbjct: 849  AEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMS 908

Query: 1715 LSEGVRFKARLVAKGYAQL 1771
             S+  R+KARLVAKGY+Q+
Sbjct: 909  PSDEARYKARLVAKGYSQI 927



 Score = 65.9 bits (159), Expect(3) = 5e-72
 Identities = 49/138 (35%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
 Frame = +2

Query: 482 KVKFSTDIHRTEGLLNYVHTDVWVLPRIHHLVGPTTLSXXXXXXPGAIRCTP*SISMMS* 661
           +VKF+T  H TEG+L+YVH+D+W         GP   +       G  R     +   S 
Sbjct: 513 RVKFNTSTHTTEGILDYVHSDLW---------GPACKTSF-----GGARYMMTIVDDYS- 557

Query: 662 MYLWN----------------KKKVELQTDRRIKKLRSDNGDEHNSDSFLQLC*DEGIER 793
             +W                 K  VE QT++++K LR+DNG E  S  F   C  EGI  
Sbjct: 558 RKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVH 617

Query: 794 HFTVRET-QQNRVVERLN 844
           H+TV  T QQN V ER+N
Sbjct: 618 HYTVPHTPQQNGVAERMN 635



 Score =  100 bits (248), Expect = 6e-18
 Identities = 52/112 (46%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQLK- 299
           Y +CP R+  + +E +  G V+M +D  C V GIGTV+IKM DG +R + DVR++P LK 
Sbjct: 343 YHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKR 402

Query: 300 NLLSLGDLESQEHKITMESGVLRVIKGLLVVMKG-IRDMNLYFLRGSTVC*N 452
           +L+SL  L+ + +K +   G+L+V KG LVVMK  I+  NLY LRG+T+  N
Sbjct: 403 SLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 454


>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
            vulgaris]
          Length = 1947

 Score =  153 bits (386), Expect(3) = 2e-70
 Identities = 78/183 (42%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            TLLE+VRCM S +GL + +W+EA+  A +L+NR P + ID K P E+WSG+ A+ Y  LR
Sbjct: 669  TLLERVRCMLSNAGLTRKYWSEAVKTACYLINRGPHTGIDCKVPYEVWSGRSAE-YSGLR 727

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMM-- 1199
            +FGC  YYHV++GKL PRA+K  FLG+  GVKG+++W P   ++++SRDVTFDE++M   
Sbjct: 728  VFGCMVYYHVNEGKLEPRAKKGCFLGYGDGVKGYRIWSPSEGRVILSRDVTFDENTMFVS 787

Query: 1200 KPQSSKQVEDSQSKEISQKVEFDVPPQSLENSVSVEIPTEVTLDIDQAEDQSVGQTDESE 1379
              + +   ++S  +   Q V  D  PQ        E P  V+  I +   + V   DE+ 
Sbjct: 788  ANKPAGDTDESTDEGSEQVVAPDPTPQVRTQGKDNEAP--VSSPIVETSQRDVAVVDETA 845

Query: 1380 PVE 1388
             VE
Sbjct: 846  DVE 848



 Score =  104 bits (260), Expect(3) = 2e-70
 Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 3/134 (2%)
 Frame = +2

Query: 1382 SGEDTEIPEGPDQGQGHVQDSIAAHKPKRHTRRPAKYDDMILAYALPV-EVIEDSIPSTY 1558
            S  +  + EG  + +   Q  I   + +    R    ++MI  YAL V E IE   P +Y
Sbjct: 849  SDHEETVVEGQKRPRKKTQRLIEQIEGRNVPGRNCCVEEMI-GYALHVAEDIESPEPMSY 907

Query: 1559 REAELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYVKEGSLSEG--VR 1732
            +EA  S+ES +W VAM EEM SL KN TWEL ++P G+K VGCKWV+ ++   SEG  VR
Sbjct: 908  KEAVSSNESAKWLVAMSEEMESLHKNQTWELVRIPQGRKVVGCKWVFKRKEGTSEGESVR 967

Query: 1733 FKARLVAKGYAQLE 1774
            +KARLVAKG++Q E
Sbjct: 968  YKARLVAKGFSQRE 981



 Score = 59.7 bits (143), Expect(3) = 2e-70
 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = +2

Query: 677 KKKVELQTDRRIKKLRSDNGDEHNSDSFLQLC*DEGIERHFTVRET-QQNRVVERLN 844
           K  VE QT +++K+LR+DNG E  +D F +LC D GI RH TVR+T QQN V ER+N
Sbjct: 611 KVLVENQTGKKVKRLRTDNGLEFVNDEFNELCRDAGIVRHRTVRKTPQQNGVAERMN 667


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  144 bits (364), Expect(3) = 6e-70
 Identities = 76/177 (42%), Positives = 115/177 (64%), Gaps = 4/177 (2%)
 Frame = +3

Query: 849  LLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLRI 1028
            ++ K RCM S +GLPK FWAEA++ A +L+NR PS A + KTP+E+WSG  A+ Y  L++
Sbjct: 603  IISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYA-NKKTPIEVWSGSPAN-YSDLKV 660

Query: 1029 FGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMM--K 1202
            FGC AY HV +GKL PRA K +FLG+ S VKG+KLW PE+KK+V+SR+V F E  M+  K
Sbjct: 661  FGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLWCPETKKVVISRNVVFHESIMLHDK 720

Query: 1203 PQSSKQVEDSQ--SKEISQKVEFDVPPQSLENSVSVEIPTEVTLDIDQAEDQSVGQT 1367
            P ++  VE  +  S ++   +     P+  + +++ + P      I+ ++  +V Q+
Sbjct: 721  PSTNVPVESQEKASVQVEHLINSGHAPEKEDVAINQDAPV-----IEDSDSSTVQQS 772



 Score = 98.6 bits (244), Expect(3) = 6e-70
 Identities = 51/112 (45%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQLK- 299
           Y +CP R+  + +E +  G V+M +D  C V GIGTV+IKM DG +R + DVR++P LK 
Sbjct: 308 YHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKR 367

Query: 300 NLLSLGDLESQEHKITMESGVLRVIKGLLVVMK-GIRDMNLYFLRGSTVC*N 452
           +L+SL  L+ + +K +   G+L+V KG LVVMK  I+  NLY L+G+T+  N
Sbjct: 368 SLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGN 419



 Score = 72.8 bits (177), Expect(3) = 6e-70
 Identities = 55/155 (35%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
 Frame = +2

Query: 431 GIHSLLKQGVLSGA*TCK--------------VKFSTDIHRTEGLLNYVHTDVWVLPRIH 568
           G+  L K+G+L G    K              VKF+T  H TEG+L+YVH+D+W   R  
Sbjct: 447 GLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 506

Query: 569 HLVGPTTLSXXXXXXPGAI--RCTP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDNGDE 742
              G   +          +            +    W K  VE QT+R++K LR+DNG E
Sbjct: 507 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFNVFKEW-KTMVERQTERKVKILRTDNGME 565

Query: 743 HNSDSFLQLC*DEGIERHFTVRET-QQNRVVERLN 844
             S  F   C  EGI RH+TV  T QQN V ER+N
Sbjct: 566 FCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMN 600


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
          Length = 1009

 Score =  151 bits (381), Expect(3) = 7e-70
 Identities = 73/139 (52%), Positives = 97/139 (69%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            T++ K RCM S +GLPK FWAEA++ A +L+NR PS AID KTP+E+WS   A  Y  LR
Sbjct: 423  TIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSSSPAK-YSDLR 481

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKP 1205
            +F C AY HV +GKL PRA K +FLG+ SGVKG+KLW PE+KK+V++R+V F E  M+  
Sbjct: 482  VFSCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVINRNVVFHESVMLHD 541

Query: 1206 QSSKQVEDSQSKEISQKVE 1262
            + S  V     ++ S +VE
Sbjct: 542  KPSTNVPVESQEKASVQVE 560



 Score = 94.0 bits (232), Expect(3) = 7e-70
 Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
 Frame = +2

Query: 1379 ASGEDTEIPEGPDQG--QGHVQDSIAAHKPKRHTRRPAKY--DDMILAYALPV--EVIED 1540
            A  +D  + E  D    Q   + SIA  +PKR+T+ P KY  +  I+ YAL V  E+  +
Sbjct: 575  AINQDAPVIEDSDSSIVQQSPKRSIAKDRPKRNTKPPRKYIEEANIVTYALSVAEEIEGN 634

Query: 1541 SIPSTYREAELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYV-KEG-S 1714
            + PSTY +A +S + +RW  AM +EM SL+KN TWEL KLP  KK + CKW++  KEG S
Sbjct: 635  TEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMS 694

Query: 1715 LSEGVRFKA 1741
             S+  R+KA
Sbjct: 695  PSDEARYKA 703



 Score = 70.5 bits (171), Expect(3) = 7e-70
 Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
 Frame = +2

Query: 482 KVKFSTDIHRTEGLLNYVHTDVWVLPRIHHLVGPTTLSXXXXXXPGAIRCTP*SISMMS* 661
           +VKF+T  H TEG+L+YVH+D+W         GPT  +       G  R     I   S 
Sbjct: 299 RVKFNTSTHTTEGILDYVHSDLW---------GPTCKTSF-----GGARYMMTIIDDYS- 343

Query: 662 MYLWN----------------KKKVELQTDRRIKKLRSDNGDEHNSDSFLQLC*DEGIER 793
             +W                 K  VE QT+R++K LR DNG E  S  F   C  EGI R
Sbjct: 344 RKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRPDNGMEFCSKIFKSYCKSEGIVR 403

Query: 794 HFTVRET-QQNRVVERLN 844
           H+TV  T QQN V ER+N
Sbjct: 404 HYTVPHTPQQNGVAERMN 421


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  147 bits (372), Expect(3) = 1e-66
 Identities = 78/152 (51%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            T+LE+VRCM S SGL K FWAEA   A HL+NR PSSA+  KTP E W+GK A DY  L+
Sbjct: 560  TILERVRCMLSSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWTGKAA-DYQHLK 618

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLW-DPESK-KIVMSRDVTFDEDSMM 1199
            +FGC AY H    KL PRA K +FLG+  GVKG+KLW + + K K ++SRDVTF+E  M 
Sbjct: 619  VFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISRDVTFNEQDMS 678

Query: 1200 KPQSSKQVEDSQSKEISQKVEFDVPPQSLENS 1295
            K   +K VE     +   + E   P +S E S
Sbjct: 679  KQTPAKDVEGLDQLQFEVEHETLQPEKSKETS 710



 Score = 84.7 bits (208), Expect(3) = 1e-66
 Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
 Frame = +3

Query: 150 LSCFEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQLK-NLLSLGDLE 326
           L  F++ D G V++ N+  C + G GTVRIK  DG+ R ++DVRY+P+LK NL+SLG L+
Sbjct: 278 LKTFKEADGGYVLLGNNKHCKILGTGTVRIKHYDGIERVLEDVRYIPELKRNLISLGMLD 337

Query: 327 SQEHKITMESGVLRVIKGLLVVMKGIRDMNLYFLRGSTV 443
              +    E   LRV +G L VMKG     LY L G TV
Sbjct: 338 KSGYTFKSEPNSLRVARGSLTVMKGTIKNGLYTLIGQTV 376



 Score = 72.4 bits (176), Expect(3) = 1e-66
 Identities = 55/156 (35%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
 Frame = +2

Query: 431 GIHSLLKQGVLSG--------------A*TCKVKFSTDIHRTEGLLNYVHTDVWVLPRIH 568
           G+  L KQGVL                    +VKF+  IH T+  L+Y+H+D+W   R+ 
Sbjct: 405 GLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVP 464

Query: 569 HLVGPTTLSXXXXXXPGAIRCTP*SISMMS*MYLWNKK---KVELQTDRRIKKLRSDNGD 739
            + G              +      +   S  +L  K+    VE QT R++KKLR+DNG 
Sbjct: 465 SIGGARYFLTLIDDYSRKVWIY--FLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGL 522

Query: 740 EHNSDSFLQLC*DEGIERHFTVRET-QQNRVVERLN 844
           E  S+ F  LC  EGI RH TVR T QQN + ER+N
Sbjct: 523 EFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMN 558



 Score = 96.3 bits (238), Expect = 8e-17
 Identities = 56/121 (46%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
 Frame = +2

Query: 1424 QGHVQDSIAAHKPKRHTRRPAKYDDM-ILAYALPV-EVIEDSIPSTYREAELSSESDRWR 1597
            QG    ++   + KR  + P +Y    + A+AL V E I D  P TY+EA  S+E+D+W 
Sbjct: 728  QGLESYNLVRDRQKRQVKPPKRYGQAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWV 787

Query: 1598 VAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYV-KEGSL-SEGVRFKARLVAKGYAQL 1771
             A++EEM SL+KN+TWEL   P  +K VG KWV+  K+G+L +E  R+KARLVAKG++Q 
Sbjct: 788  KAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQK 847

Query: 1772 E 1774
            E
Sbjct: 848  E 848


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  162 bits (411), Expect(2) = 3e-63
 Identities = 83/179 (46%), Positives = 116/179 (64%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            TLLE+ RCM S +GL + FWAEA++ A +L+NR P + I  KTPMEMWSGK AD Y  L+
Sbjct: 580  TLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAAD-YSNLK 638

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMKP 1205
             FGC AYYHVS+GKL PRA+K VF+G+  GVKGF++W P  K+++MSR+V FDE  +++ 
Sbjct: 639  AFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLR- 697

Query: 1206 QSSKQVEDSQSKEISQKVEFDVPPQSLENSVSVEIPTEVTLDIDQAEDQSVGQTDESEP 1382
               K    S++  + ++VEF V    ++N   ++ P E     +  E Q+     ES P
Sbjct: 698  TIVKPTTTSETGSLDKQVEFQV----IQNESDLKEPEE-----EDQEPQTETDIPESMP 747



 Score =  109 bits (273), Expect(2) = 3e-63
 Identities = 63/134 (47%), Positives = 89/134 (66%), Gaps = 6/134 (4%)
 Frame = +2

Query: 1391 DTEIPEGPDQGQGHVQDSIAAHKPKR-HTRRPAKY--DDMILAYALPV-EVIEDSIPSTY 1558
            +T+IPE        +  SIA  +P+R   R P +Y  +DM+  YAL V E ++ S PSTY
Sbjct: 739  ETDIPESMPSD---IHQSIAQDRPRRVGVRPPTRYGFEDMV-GYALQVAEEVDTSEPSTY 794

Query: 1559 REAELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYVKEGSLS--EGVR 1732
            +EA LSS+S++W  AM +EM SL KN TW+L   PSG+K + CKWV+ K+  +S  EGV+
Sbjct: 795  KEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVK 854

Query: 1733 FKARLVAKGYAQLE 1774
            +KAR+VA+G+ Q E
Sbjct: 855  YKARVVARGFNQRE 868



 Score = 90.5 bits (223), Expect = 4e-15
 Identities = 46/108 (42%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQL-K 299
           Y +CPRRE  + +E++D G + M N   C V G G+++I+  DG    +++VR+VP + K
Sbjct: 287 YHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTK 346

Query: 300 NLLSLGDLESQEHKITMESGVLRVIKGLLVVMKGIRDMNLYFLRGSTV 443
           NL+SL  L+S+    + + GVLRV KG  +++KG+    LYFL+GSTV
Sbjct: 347 NLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTV 394



 Score = 72.8 bits (177), Expect = 9e-10
 Identities = 53/144 (36%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
 Frame = +2

Query: 488 KFSTDIHRTEGLLNYVHTDVWVLPRIHHLVGPTTLSXXXXXXPGAIRCTP*SISMMS*MY 667
           KF   IHRT+G L+Y+H+D W   R+  L G                      S M+ +Y
Sbjct: 458 KFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIID-----------DYSRMTWVY 506

Query: 668 LWNKKK------------VELQTDRRIKKLRSDNGDEHNSDSFLQLC*DEGIERHFTVRE 811
           +   K             +E QT ++IK+LR+DNG E     F Q C DEGI RH TVR 
Sbjct: 507 MMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRN 566

Query: 812 T-QQNRVVERLNYLTGEGAMYVLT 880
           T QQN V ER+N    E A  +L+
Sbjct: 567 TPQQNGVAERMNQTLLERARCMLS 590


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  156 bits (395), Expect(3) = 3e-62
 Identities = 88/178 (49%), Positives = 115/178 (64%), Gaps = 7/178 (3%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            TL+++ RCM   +GL K FWAEA+  A++LVNR PS+AID KTP E+WSGK   +Y  L+
Sbjct: 914  TLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGK-PSNYSGLK 972

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESK--KIVMSRDVTFDEDSMM 1199
            IFGCPAY HVSDGKL PRA K +FLG+ +GVKG++LW  E +  K ++SRDVTFDE +M 
Sbjct: 973  IFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMF 1032

Query: 1200 KPQSSKQVEDSQSKE---ISQKVEF--DVPPQSLENSVSVEIPTEVTLDIDQAEDQSV 1358
              +         SK     +QKVEF  D P ++  +  S E P      IDQ + QS+
Sbjct: 1033 GQRKEFGDLAGTSKTDLGANQKVEFEVDAPMENGVDDTSEEQPV-----IDQNDSQSI 1085



 Score = 67.8 bits (164), Expect(3) = 3e-62
 Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = +3

Query: 174 SGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQL-KNLLSLGDLESQEHKITM 350
           +G V + +D    V+G G+V+IKM DG+VR ++   YVP L KNL+S+G L+   +  + 
Sbjct: 644 NGSVKLGDDGELGVKGSGSVQIKMYDGLVRTLN-AWYVPGLRKNLISVGTLDKNGYTFSG 702

Query: 351 ESGVLRVIKGLLVVMKGIRDMNLYFLRGSTV 443
             GVLRV KG LVVMKG     +Y L GS+V
Sbjct: 703 SGGVLRVSKGALVVMKGRLQHGIYTLMGSSV 733



 Score = 65.5 bits (158), Expect(3) = 3e-62
 Identities = 54/155 (34%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
 Frame = +2

Query: 431  GIHSLLKQGVLSGA*TCK--------------VKFSTDIHRTEGLLNYVHTDVWVLPRIH 568
            G+  L KQG+LSGA T K              VKFS   H T G+L Y+H+D+W    + 
Sbjct: 759  GLSILSKQGLLSGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGVLEYIHSDLWGPSPVE 818

Query: 569  HLVGPTTLSXXXXXXPGAIRC--TP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDNGDE 742
               G              +          +      W K  VE +T + +K LR+DNG E
Sbjct: 819  SHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEW-KTMVEKRTGKVVKTLRTDNGLE 877

Query: 743  HNSDSFLQLC*DEGIERHFTVRET-QQNRVVERLN 844
              +  F + C  EGI RH TVR T QQN V ER+N
Sbjct: 878  FCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMN 912



 Score = 94.4 bits (233), Expect = 3e-16
 Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 10/138 (7%)
 Frame = +2

Query: 1382 SGEDTEIPEGPDQGQGHVQDSIAAHKPKRHTRRPAKYDDMI-------LAYALPV-EVIE 1537
            +G D    E P   Q   Q SIAA +P+R  RRP +Y D +       +A+AL V E I 
Sbjct: 1065 NGVDDTSEEQPVIDQNDSQ-SIAAXRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIG 1123

Query: 1538 DSIPSTYREAELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVY-VKEG- 1711
               P +Y+EA  S +S +W  +M++EM SL+KN TWEL  LP G K V CKW++ +K+G 
Sbjct: 1124 REEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGI 1183

Query: 1712 SLSEGVRFKARLVAKGYA 1765
            S  E  ++K+RLVAK ++
Sbjct: 1184 SEDEPPKYKSRLVAKVFS 1201


>emb|CDP17739.1| unnamed protein product [Coffea canephora]
          Length = 435

 Score =  168 bits (426), Expect(3) = 2e-61
 Identities = 91/190 (47%), Positives = 122/190 (64%), Gaps = 14/190 (7%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            TL+EKV CM S + L + FWAE +TYA HLVNRLPSSAI GKTP+E+WSGK   DYD LR
Sbjct: 220  TLVEKVHCMLSNARLGRKFWAETVTYAQHLVNRLPSSAIGGKTPLEVWSGKPTTDYDSLR 279

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDEDSMMK- 1202
            IF   AYYHV++ KL+PRA+KA+F+G  +GVKG++LW  E+KK ++SRDVTF+E +M+  
Sbjct: 280  IFYSTAYYHVNESKLDPRAKKAIFMGLNAGVKGYRLWCLEAKKTIISRDVTFNESAMLNK 339

Query: 1203 ---------PQ----SSKQVEDSQSKEISQKVEFDVPPQSLENSVSVEIPTEVTLDIDQA 1343
                     PQ    + KQVE  Q             P + E S   EI T+  L+  ++
Sbjct: 340  VTQNGTSGTPQQVECTPKQVEFEQIVVSPANSTISDSPMAEEESDEEEISTQ-DLNSSKS 398

Query: 1344 EDQSVGQTDE 1373
            +  S+GQ ++
Sbjct: 399  QLPSIGQNEK 408



 Score = 83.6 bits (205), Expect(3) = 2e-61
 Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 16/153 (10%)
 Frame = +2

Query: 434 IHSLLKQGVLSGA*TCK--------------VKFSTDIHRTEGLLNYVHTDVWVLPRIHH 571
           + +L KQG+L G   CK              VKF T IH T+G+L+YVH++VW   +   
Sbjct: 66  LQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSNVWGPAKTPS 125

Query: 572 LVGPTTLSXXXXXXPGAIRC-TP*SISMMS*MYLWNKKKVELQTDRRIKKLRSDNGDEHN 748
           L G              +   T  S   +  ++L  K +VE QT R+IK LR+DNG E+ 
Sbjct: 126 LGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKARVENQTGRKIKILRTDNGGEYK 185

Query: 749 SDSFLQLC*DEGIERHFTVRET-QQNRVVERLN 844
           SD F ++  + GI +HFTVR+T QQN V ER+N
Sbjct: 186 SDPFQKIGQECGIVQHFTVRKTPQQNGVSERMN 218



 Score = 35.0 bits (79), Expect(3) = 2e-61
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 348 MESGVLRVIKGLLVVMKGIRDMNLYFLRGSTV 443
           M  G+L+V  G LV++KG+R   LY+ +GS V
Sbjct: 1   MRDGILKVTSGALVMLKGVRKNILYYYQGSIV 32


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  126 bits (317), Expect(3) = 4e-61
 Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 9/164 (5%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            TL+EK R M   +GLP+ FWAEA  +A +L+NR PS AI+ K   E+WSGK   DY  LR
Sbjct: 563  TLMEKERSMRFHAGLPEEFWAEAANHACYLINRSPSRAINFKCAEEVWSGKPV-DYSNLR 621

Query: 1026 IFGCPAYYHVSDG---KLNPRARKAVFLGFRSGVKGFKLWDPESKKIVMSRDVTFDED-- 1190
            +FGC AY H+      KL P++ + +F+GF  GVKG+KLWD  ++K V+SRDV FDE   
Sbjct: 622  VFGCSAYAHIPKDERTKLEPKSLECLFIGFEKGVKGYKLWDIVNEKKVISRDVVFDEREA 681

Query: 1191 ---SMMKPQ-SSKQVEDSQSKEISQKVEFDVPPQSLENSVSVEI 1310
               S+ KP  +  + +  Q+++ + +V  + P    + +V  ++
Sbjct: 682  ISISLAKPSVADSEAQVEQNEQGNDEVAIEEPEHQQQPTVMAQV 725



 Score = 89.7 bits (221), Expect(3) = 4e-61
 Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
 Frame = +2

Query: 1385 GEDTEIPEGPDQGQGHVQDSIAAHKPKRHTRRPAKY-----DDMILAYALPVEVIEDSIP 1549
            G+++ IP+ P+      + SIA  KPKR+ +   ++     +D+  A +     I    P
Sbjct: 732  GQNSPIPQAPES----FKRSIALDKPKRNRKPIQRFGFEPEEDVSRALS-----ISQGDP 782

Query: 1550 STYREAELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVYVKEGSLSE-- 1723
            +TY +A  S ES  W  AM EEM SL KN  WEL   P  +K VGCKWV+ K+  + E  
Sbjct: 783  TTYEDAIESVESAGWIGAMTEEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDD 842

Query: 1724 GVRFKARLVAKGYAQLE 1774
             + +KARLVAKGY+Q E
Sbjct: 843  AITYKARLVAKGYSQKE 859



 Score = 70.1 bits (170), Expect(3) = 4e-61
 Identities = 53/135 (39%), Positives = 71/135 (52%), Gaps = 18/135 (13%)
 Frame = +2

Query: 494 STDIHRTEGLLNYVHTDVWVLPRIHHLVGPT-TLSXXXXXXPGAIRCTP*SISMMS*MYL 670
           S+  ++++G+L+Y+HTDVW         GP+ T+S       G  R     I   S   +
Sbjct: 443 SSSENKSKGVLDYIHTDVW---------GPSATISK------GGARYFVSFIDDFS-RKV 486

Query: 671 WN----------------KKKVELQTDRRIKKLRSDNGDEHNSDSFLQLC*DEGIERHFT 802
           W                 K +V  QT R+IK LRSDNG E+    FLQLC DEGI RHFT
Sbjct: 487 WIFFMKTKNEVFTKFKEWKAEVGNQTGRKIKCLRSDNGGEYRDKKFLQLCKDEGITRHFT 546

Query: 803 VRET-QQNRVVERLN 844
           V+++ QQN V ER+N
Sbjct: 547 VKKSPQQNGVAERMN 561



 Score = 72.0 bits (175), Expect = 2e-09
 Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
 Frame = +3

Query: 123 YQVCPRRE*LSCFEKIDSGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQL-K 299
           +  C  R+    +++ ++  V+M ND    + GIG V+I+M DG+VR + +VR+ P L +
Sbjct: 271 FHTCAHRDWFDTYKEGNTRSVLMGNDSPSRIMGIGMVKIRMHDGIVRALGNVRHTPGLNR 330

Query: 300 NLLSLGDLESQEHKITMESGVLRVIKGLLVVMKG-IRDMNLYFLRGSTV 443
           NL+SL  ++        ++GVL+V KG +V MKG I+  N+Y L GSTV
Sbjct: 331 NLISLSTMDRVGFWHKGQNGVLKVGKGQMVYMKGAIQPDNMYKLTGSTV 379


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  156 bits (395), Expect(3) = 5e-60
 Identities = 88/178 (49%), Positives = 115/178 (64%), Gaps = 7/178 (3%)
 Frame = +3

Query: 846  TLLEKVRCMFSQSGLPKSFWAEALTYASHLVNRLPSSAIDGKTPMEMWSGKIADDYDRLR 1025
            TL+++ RCM   +GL K FWAEA+  A++LVNR PS+AID KTP E+WSGK   +Y  L+
Sbjct: 701  TLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGK-PSNYSGLK 759

Query: 1026 IFGCPAYYHVSDGKLNPRARKAVFLGFRSGVKGFKLWDPESK--KIVMSRDVTFDEDSMM 1199
            IFGCPAY HVSDGKL PRA K +FLG+ +GVKG++LW  E +  K ++SRDVTFDE +M 
Sbjct: 760  IFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMF 819

Query: 1200 KPQSSKQVEDSQSKE---ISQKVEF--DVPPQSLENSVSVEIPTEVTLDIDQAEDQSV 1358
              +         SK     +QKVEF  D P ++  +  S E P      IDQ + QS+
Sbjct: 820  GQRKEFGDLAGTSKTDLGANQKVEFEVDAPMENGVDDTSEEQPV-----IDQNDSQSI 872



 Score = 67.8 bits (164), Expect(3) = 5e-60
 Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = +3

Query: 174 SGVVIMRNDHSCHVEGIGTVRIKMGDGVVREIDDVRYVPQL-KNLLSLGDLESQEHKITM 350
           +G V + +D    V+G G+V+IKM DG+VR ++   YVP L KNL+S+G L+   +  + 
Sbjct: 447 NGSVKLGDDGELGVKGSGSVQIKMYDGLVRTLN-AWYVPGLRKNLISVGTLDKNGYTFSG 505

Query: 351 ESGVLRVIKGLLVVMKGIRDMNLYFLRGSTV 443
             GVLRV KG LVVMKG     +Y L GS+V
Sbjct: 506 SGGVLRVSKGALVVMKGRLQHGIYTLMGSSV 536



 Score = 58.2 bits (139), Expect(3) = 5e-60
 Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
 Frame = +2

Query: 482 KVKFSTDIHRTEGLLNYVHTDVWVLPRIHHLVGPTTLSXXXXXXPGAIRC--TP*SISMM 655
           +VKFS   H T G+L Y+H+D+W    +    G              +          + 
Sbjct: 577 EVKFSMGSHTTNGVLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVF 636

Query: 656 S*MYLWNKKKVELQTDRRIKKLRSDNGDEHNSDSFLQLC*DEGIERHFTVRET-QQNRVV 832
                W K  VE +T + +K LR+DNG E  +  F + C  EGI RH TVR T QQN V 
Sbjct: 637 GKFKEW-KTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVA 695

Query: 833 ERLN 844
           ER+N
Sbjct: 696 ERMN 699



 Score =  105 bits (261), Expect = 2e-19
 Identities = 63/141 (44%), Positives = 87/141 (61%), Gaps = 10/141 (7%)
 Frame = +2

Query: 1382 SGEDTEIPEGPDQGQGHVQDSIAAHKPKRHTRRPAKYDDMI-------LAYALPV-EVIE 1537
            +G D    E P   Q   Q SIAAH+P+R  RRP +Y D +       +A+AL V E I 
Sbjct: 852  NGVDDTSEEQPVIDQNDSQ-SIAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIG 910

Query: 1538 DSIPSTYREAELSSESDRWRVAMEEEMRSLQKNDTWELAKLPSGKKAVGCKWVY-VKEG- 1711
               P +Y+EA  S +S +W  +M++EM SL+KN TWEL  LP G K V CKW++ +K+G 
Sbjct: 911  REEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGI 970

Query: 1712 SLSEGVRFKARLVAKGYAQLE 1774
            S  E  ++K+RLVAKG++Q E
Sbjct: 971  SXDEPPKYKSRLVAKGFSQKE 991