BLASTX nr result
ID: Ophiopogon21_contig00005941
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00005941
(1519 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 393 e-106
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 392 e-106
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 389 e-105
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 387 e-104
gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japo... 386 e-104
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su... 386 e-104
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su... 383 e-103
ref|XP_007046588.1| DNA-directed RNA polymerase II subunit RPB1 ... 382 e-103
ref|XP_007046587.1| DNA-directed RNA polymerase II subunit RPB1 ... 382 e-103
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 382 e-103
ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II su... 382 e-103
ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su... 380 e-102
gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium r... 380 e-102
gb|KJB43257.1| hypothetical protein B456_007G190500 [Gossypium r... 380 e-102
ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II su... 380 e-102
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 380 e-102
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 380 e-102
ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S... 380 e-102
ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phas... 379 e-102
ref|XP_012469269.1| PREDICTED: DNA-directed RNA polymerase II su... 379 e-102
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 393 bits (1010), Expect = e-106
Identities = 191/198 (96%), Positives = 197/198 (99%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD TRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1339 CHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTY 1398
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVY+EADHLRGVTENIMLGQLAPIG
Sbjct: 1399 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYSEADHLRGVTENIMLGQLAPIG 1458
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTP+RSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1459 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGTPYHEGMMSPSYLLSPNVR 1518
Query: 977 SSPITDAQFSPYVGGMAF 924
SSPITDAQFSPYVGGMAF
Sbjct: 1519 SSPITDAQFSPYVGGMAF 1536
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 392 bits (1006), Expect = e-106
Identities = 191/198 (96%), Positives = 196/198 (98%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD TRTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1339 CHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1398
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D+LRGVTENIMLGQLAPIG
Sbjct: 1399 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIG 1458
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTP+RSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1459 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGTPYHEGMMSPSYLLSPNVR 1518
Query: 977 SSPITDAQFSPYVGGMAF 924
SSPITDAQFSPYVGGMAF
Sbjct: 1519 SSPITDAQFSPYVGGMAF 1536
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 389 bits (1000), Expect = e-105
Identities = 189/198 (95%), Positives = 195/198 (98%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD TRTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1339 CHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1398
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE DHLRGVTENIMLGQLAPIG
Sbjct: 1399 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDHLRGVTENIMLGQLAPIG 1458
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLNDQMLQQAIELQLPSYMEGL+FGMTP+RSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1459 TGDCALYLNDQMLQQAIELQLPSYMEGLEFGMTPSRSPISGTPYHEGMMSPSYLLSPNVR 1518
Query: 977 SSPITDAQFSPYVGGMAF 924
SSPITDAQFSPYVGGM F
Sbjct: 1519 SSPITDAQFSPYVGGMTF 1536
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 387 bits (993), Expect = e-104
Identities = 188/198 (94%), Positives = 193/198 (97%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD TRTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1339 CHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1398
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVD LLDAAV+AE DHLRGVTENIMLGQLAPIG
Sbjct: 1399 RGHLMAITRHGINRNDTGPMMRCSFEETVDXLLDAAVFAETDHLRGVTENIMLGQLAPIG 1458
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLNDQMLQ AIELQLPSYMEGLDFGMTP+RSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1459 TGDCALYLNDQMLQXAIELQLPSYMEGLDFGMTPSRSPISGTPYHEGMMSPSYLLSPNVR 1518
Query: 977 SSPITDAQFSPYVGGMAF 924
SSPITDAQFSPYVGGM F
Sbjct: 1519 SSPITDAQFSPYVGGMTF 1536
>gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japonica Group]
Length = 1526
Score = 386 bits (991), Expect = e-104
Identities = 188/198 (94%), Positives = 196/198 (98%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD TRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1009 CHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTY 1068
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQLAPIG
Sbjct: 1069 RGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIG 1128
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TG CALYLNDQMLQQAIELQLPSY+EGLDFGMTPARSP+SGTPYHEGMMSPSYLLSPNIR
Sbjct: 1129 TGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPISGTPYHEGMMSPSYLLSPNIR 1188
Query: 977 SSPITDAQFSPYVGGMAF 924
+SPITDAQFSPYVGGMAF
Sbjct: 1189 ASPITDAQFSPYVGGMAF 1206
>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
brachyantha]
Length = 1855
Score = 386 bits (991), Expect = e-104
Identities = 188/198 (94%), Positives = 196/198 (98%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD TRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1338 CHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTY 1397
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQLAPIG
Sbjct: 1398 RGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIG 1457
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TG CALYLNDQMLQQAIELQLPSY+EGLDFGMTPARSP+SGTPYHEGMMSPSYLLSPNIR
Sbjct: 1458 TGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPISGTPYHEGMMSPSYLLSPNIR 1517
Query: 977 SSPITDAQFSPYVGGMAF 924
+SPITDAQFSPYVGGMAF
Sbjct: 1518 ASPITDAQFSPYVGGMAF 1535
>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 383 bits (984), Expect = e-103
Identities = 189/205 (92%), Positives = 195/205 (95%), Gaps = 7/205 (3%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHED+D TRTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1339 CHEDIDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1398
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE DHLRGVTENIMLGQLAPIG
Sbjct: 1399 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEGDHLRGVTENIMLGQLAPIG 1458
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYME-------GLDFGMTPARSPMSGTPYHEGMMSPSY 999
TGDCALYLNDQMLQQAIELQLPSYM+ G DFGMTP+RSP+SGTPYHEGMMSPSY
Sbjct: 1459 TGDCALYLNDQMLQQAIELQLPSYMDGGFGGPGGFDFGMTPSRSPISGTPYHEGMMSPSY 1518
Query: 998 LLSPNIRSSPITDAQFSPYVGGMAF 924
LLSPNIR+SPITDAQFSPYVGGMAF
Sbjct: 1519 LLSPNIRASPITDAQFSPYVGGMAF 1543
>ref|XP_007046588.1| DNA-directed RNA polymerase II subunit RPB1 isoform 5 [Theobroma
cacao] gi|508698849|gb|EOX90745.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 5 [Theobroma cacao]
Length = 1512
Score = 382 bits (981), Expect = e-103
Identities = 186/198 (93%), Positives = 194/198 (97%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 989 CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1048
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQLAPIG
Sbjct: 1049 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIG 1108
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLND+ML+ AIELQLPSYMEGL+FGMTPARSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1109 TGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLR 1168
Query: 977 SSPITDAQFSPYVGGMAF 924
SPITDAQFSPYVGGMAF
Sbjct: 1169 LSPITDAQFSPYVGGMAF 1186
>ref|XP_007046587.1| DNA-directed RNA polymerase II subunit RPB1 isoform 4 [Theobroma
cacao] gi|508698848|gb|EOX90744.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 4 [Theobroma cacao]
Length = 1511
Score = 382 bits (981), Expect = e-103
Identities = 186/198 (93%), Positives = 194/198 (97%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 989 CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1048
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQLAPIG
Sbjct: 1049 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIG 1108
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLND+ML+ AIELQLPSYMEGL+FGMTPARSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1109 TGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLR 1168
Query: 977 SSPITDAQFSPYVGGMAF 924
SPITDAQFSPYVGGMAF
Sbjct: 1169 LSPITDAQFSPYVGGMAF 1186
>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|590702285|ref|XP_007046586.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 382 bits (981), Expect = e-103
Identities = 186/198 (93%), Positives = 194/198 (97%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1339 CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1398
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQLAPIG
Sbjct: 1399 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIG 1458
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLND+ML+ AIELQLPSYMEGL+FGMTPARSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1459 TGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLR 1518
Query: 977 SSPITDAQFSPYVGGMAF 924
SPITDAQFSPYVGGMAF
Sbjct: 1519 LSPITDAQFSPYVGGMAF 1536
>ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Amborella
trichopoda] gi|548833823|gb|ERM96260.1| hypothetical
protein AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 382 bits (980), Expect = e-103
Identities = 187/198 (94%), Positives = 196/198 (98%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
C+E+VD TRTTSNHLIEVI+VLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1341 CNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTY 1400
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG
Sbjct: 1401 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1460
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLNDQMLQQAIELQLPSYMEG+DFGMTP+RSPM+GTPYHEGMMSP YLLSPN+R
Sbjct: 1461 TGDCALYLNDQMLQQAIELQLPSYMEGMDFGMTPSRSPMTGTPYHEGMMSP-YLLSPNMR 1519
Query: 977 SSPITDAQFSPYVGGMAF 924
SSPITDAQFSPYVGGMAF
Sbjct: 1520 SSPITDAQFSPYVGGMAF 1537
>ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 380 bits (977), Expect = e-102
Identities = 185/198 (93%), Positives = 194/198 (97%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1339 CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1398
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQLAPIG
Sbjct: 1399 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIG 1458
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLND+ML+ AIELQLPSYMEGL+FGMTPARSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1459 TGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLR 1518
Query: 977 SSPITDAQFSPYVGGMAF 924
SPI+DAQFSPYVGGMAF
Sbjct: 1519 LSPISDAQFSPYVGGMAF 1536
>gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1809
Score = 380 bits (977), Expect = e-102
Identities = 185/198 (93%), Positives = 194/198 (97%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1339 CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1398
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQLAPIG
Sbjct: 1399 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIG 1458
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLND+ML+ AIELQLPSYMEGL+FGMTPARSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1459 TGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLR 1518
Query: 977 SSPITDAQFSPYVGGMAF 924
SPI+DAQFSPYVGGMAF
Sbjct: 1519 LSPISDAQFSPYVGGMAF 1536
>gb|KJB43257.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1664
Score = 380 bits (977), Expect = e-102
Identities = 185/198 (93%), Positives = 194/198 (97%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1157 CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1216
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQLAPIG
Sbjct: 1217 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIG 1276
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLND+ML+ AIELQLPSYMEGL+FGMTPARSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1277 TGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLR 1336
Query: 977 SSPITDAQFSPYVGGMAF 924
SPI+DAQFSPYVGGMAF
Sbjct: 1337 LSPISDAQFSPYVGGMAF 1354
>ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|823191464|ref|XP_012491468.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1
isoform X1 [Gossypium raimondii]
gi|823191467|ref|XP_012491470.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 isoform X1 [Gossypium
raimondii] gi|823191470|ref|XP_012491471.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|763776132|gb|KJB43255.1|
hypothetical protein B456_007G190500 [Gossypium
raimondii] gi|763776133|gb|KJB43256.1| hypothetical
protein B456_007G190500 [Gossypium raimondii]
gi|763776135|gb|KJB43258.1| hypothetical protein
B456_007G190500 [Gossypium raimondii]
Length = 1846
Score = 380 bits (977), Expect = e-102
Identities = 185/198 (93%), Positives = 194/198 (97%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1339 CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1398
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQLAPIG
Sbjct: 1399 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIG 1458
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLND+ML+ AIELQLPSYMEGL+FGMTPARSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1459 TGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLR 1518
Query: 977 SSPITDAQFSPYVGGMAF 924
SPI+DAQFSPYVGGMAF
Sbjct: 1519 LSPISDAQFSPYVGGMAF 1536
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 380 bits (976), Expect = e-102
Identities = 187/198 (94%), Positives = 192/198 (96%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD TRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1338 CHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTY 1397
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D LRGVTENIMLGQLAPIG
Sbjct: 1398 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDCLRGVTENIMLGQLAPIG 1457
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTP+RSP+ GTPY+EGMMSPSYLLSPN R
Sbjct: 1458 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPIMGTPYNEGMMSPSYLLSPNAR 1517
Query: 977 SSPITDAQFSPYVGGMAF 924
SPITDAQFSPYVGGMAF
Sbjct: 1518 LSPITDAQFSPYVGGMAF 1535
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 380 bits (976), Expect = e-102
Identities = 185/198 (93%), Positives = 192/198 (96%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1338 CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1397
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D LRGVTENIMLGQLAPIG
Sbjct: 1398 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQLAPIG 1457
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TGDCALYLNDQMLQ AIELQLPSYMEGLDFGMTP+RSP++GTPYH+GMMSP+YLLSPN+R
Sbjct: 1458 TGDCALYLNDQMLQHAIELQLPSYMEGLDFGMTPSRSPITGTPYHDGMMSPNYLLSPNLR 1517
Query: 977 SSPITDAQFSPYVGGMAF 924
SPITDAQFSPYVGGMAF
Sbjct: 1518 LSPITDAQFSPYVGGMAF 1535
>ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor]
gi|241940227|gb|EES13372.1| hypothetical protein
SORBIDRAFT_07g003680 [Sorghum bicolor]
Length = 1857
Score = 380 bits (975), Expect = e-102
Identities = 188/199 (94%), Positives = 194/199 (97%), Gaps = 1/199 (0%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD TRTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1337 CHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1396
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+DHLRGVTENIMLGQLAPIG
Sbjct: 1397 RGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDHLRGVTENIMLGQLAPIG 1456
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TG CALYLNDQMLQQAIELQLPSY+EGLDFGMTPARSP+SGTPYHEGMMSPSYLLSPNIR
Sbjct: 1457 TGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPISGTPYHEGMMSPSYLLSPNIR 1516
Query: 977 SSPI-TDAQFSPYVGGMAF 924
+SPI TDA FSPYVG MAF
Sbjct: 1517 ASPINTDASFSPYVGHMAF 1535
>ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris]
gi|561031277|gb|ESW29856.1| hypothetical protein
PHAVU_002G104500g [Phaseolus vulgaris]
Length = 1834
Score = 379 bits (974), Expect = e-102
Identities = 183/198 (92%), Positives = 193/198 (97%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD TRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1338 CHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTY 1397
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE DHLRGVTENIMLGQLAPIG
Sbjct: 1398 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIG 1457
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TG+CALYLND+ML+ AIELQLPSYM+GLDFGMTPARSP+SGTPYHEG+MSPSYLLSPN+R
Sbjct: 1458 TGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLR 1517
Query: 977 SSPITDAQFSPYVGGMAF 924
SP +DAQFSPYVGGMAF
Sbjct: 1518 LSPTSDAQFSPYVGGMAF 1535
>ref|XP_012469269.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Gossypium
raimondii] gi|763750176|gb|KJB17564.1| hypothetical
protein B456_003G005700 [Gossypium raimondii]
gi|763750177|gb|KJB17565.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
gi|763750178|gb|KJB17566.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
gi|763750179|gb|KJB17567.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
Length = 1847
Score = 379 bits (973), Expect = e-102
Identities = 184/198 (92%), Positives = 194/198 (97%)
Frame = -3
Query: 1517 CHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1338
CHEDVD RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCDTMTY
Sbjct: 1339 CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTY 1398
Query: 1337 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIG 1158
RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQLAPIG
Sbjct: 1399 RGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIG 1458
Query: 1157 TGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPMSGTPYHEGMMSPSYLLSPNIR 978
TG+CALYLND+ML+ AIELQLPSYMEGL+FGMTPARSP+SGTPYHEGMMSPSYLLSPN+R
Sbjct: 1459 TGECALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLR 1518
Query: 977 SSPITDAQFSPYVGGMAF 924
SPI+DAQFSPYVGGMAF
Sbjct: 1519 LSPISDAQFSPYVGGMAF 1536