BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00005036
         (418 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009420922.1| PREDICTED: pentatricopeptide repeat-containi...   105   1e-20
ref|XP_010660210.1| PREDICTED: pentatricopeptide repeat-containi...    94   3e-17
ref|XP_002266822.2| PREDICTED: pentatricopeptide repeat-containi...    94   3e-17
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]    94   3e-17
ref|XP_008218329.1| PREDICTED: pentatricopeptide repeat-containi...    90   8e-16
ref|XP_007205118.1| hypothetical protein PRUPE_ppa004835mg [Prun...    90   8e-16
ref|XP_010265021.1| PREDICTED: pentatricopeptide repeat-containi...    88   2e-15
ref|XP_009343763.1| PREDICTED: pentatricopeptide repeat-containi...    87   5e-15
ref|XP_009124196.1| PREDICTED: pentatricopeptide repeat-containi...    87   5e-15
emb|CDY50755.1| BnaAnng10620D [Brassica napus]                         87   5e-15
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,...    87   5e-15
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi...    87   5e-15
ref|XP_009333596.1| PREDICTED: uncharacterized protein LOC103926...    87   6e-15
ref|XP_008370748.1| PREDICTED: pentatricopeptide repeat-containi...    87   6e-15
ref|XP_008443759.1| PREDICTED: pentatricopeptide repeat-containi...    86   8e-15
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]            86   1e-14
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar...    86   1e-14
ref|XP_013750772.1| PREDICTED: pentatricopeptide repeat-containi...    85   2e-14
gb|KDO44558.1| hypothetical protein CISIN_1g047017mg, partial [C...    84   3e-14
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14

>ref|XP_009420922.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
            chloroplastic-like [Musa acuminata subsp. malaccensis]
          Length = 1025

 Score =  105 bits (262), Expect = 1e-20
 Identities = 49/72 (68%), Positives = 63/72 (87%)
 Frame = -2

Query: 417  ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
            IL EM+ KGCR NETTYI+LVEGIAYAGH+AEAMELA++L  ++VF E S++RLN+ FP+
Sbjct: 954  ILAEMMDKGCRTNETTYIILVEGIAYAGHKAEAMELAKDLAMRNVFSEDSLKRLNQNFPI 1013

Query: 237  LNLYKEMPQPDD 202
            L+L+KE+PQP D
Sbjct: 1014 LDLFKEIPQPVD 1025


>ref|XP_010660210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic isoform X2 [Vitis vinifera]
          Length = 582

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = -2

Query: 408 EMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPMLNL 229
           EM+ KGCRPNETTYILL+EGI +AG R EAMELA  L  +DV  + S +RLNKTFPML++
Sbjct: 512 EMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTFPMLDV 571

Query: 228 YKEM 217
           YKE+
Sbjct: 572 YKEL 575


>ref|XP_002266822.2| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic isoform X1 [Vitis vinifera]
          Length = 592

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = -2

Query: 408 EMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPMLNL 229
           EM+ KGCRPNETTYILL+EGI +AG R EAMELA  L  +DV  + S +RLNKTFPML++
Sbjct: 522 EMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTFPMLDV 581

Query: 228 YKEM 217
           YKE+
Sbjct: 582 YKEL 585


>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = -2

Query: 408 EMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPMLNL 229
           EM+ KGCRPNETTYILL+EGI +AG R EAMELA  L  +DV  + S +RLNKTFPML++
Sbjct: 522 EMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTFPMLDV 581

Query: 228 YKEM 217
           YKE+
Sbjct: 582 YKEL 585


>ref|XP_008218329.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Prunus mume]
          Length = 592

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 42/67 (62%), Positives = 52/67 (77%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L EMV KGCRPNETTYILL+EGI +AG RAEAMELA  +       E S +RLN+TFPM
Sbjct: 519 VLTEMVEKGCRPNETTYILLIEGIGFAGWRAEAMELANSVFSLRAISEDSFKRLNRTFPM 578

Query: 237 LNLYKEM 217
           L+++KE+
Sbjct: 579 LDVFKEL 585


>ref|XP_007205118.1| hypothetical protein PRUPE_ppa004835mg [Prunus persica]
           gi|462400760|gb|EMJ06317.1| hypothetical protein
           PRUPE_ppa004835mg [Prunus persica]
          Length = 489

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 42/67 (62%), Positives = 52/67 (77%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L EMV KGCRPNETTYILL+EGI +AG RAEAMELA  +       E S +RLN+TFPM
Sbjct: 416 VLTEMVEKGCRPNETTYILLIEGIGFAGWRAEAMELANSVFSLRAISEDSFKRLNRTFPM 475

Query: 237 LNLYKEM 217
           L+++KE+
Sbjct: 476 LDVFKEL 482


>ref|XP_010265021.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Nelumbo nucifera]
          Length = 582

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 42/69 (60%), Positives = 53/69 (76%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L  MV KGCRPNETT ILL+EGIAYAG R EAMELA  L  ++V    +++RLN+ FPM
Sbjct: 509 LLVVMVKKGCRPNETTCILLIEGIAYAGWRGEAMELANALFSREVISIDAVKRLNRIFPM 568

Query: 237 LNLYKEMPQ 211
           LN+YK++ Q
Sbjct: 569 LNVYKDLTQ 577


>ref|XP_009343763.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 633

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L  MV KGCRPNETTY LL+EGI +AG RAEAM+LA  +       E S RRLN+TFPM
Sbjct: 560 VLAAMVEKGCRPNETTYTLLIEGIGFAGWRAEAMQLAHSVFSLRAISEDSFRRLNRTFPM 619

Query: 237 LNLYKEM 217
           L++YKE+
Sbjct: 620 LDVYKEL 626


>ref|XP_009124196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Brassica rapa]
          Length = 572

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 40/73 (54%), Positives = 54/73 (73%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L+ MV  GC+PNETTY +L+EGI +AG+RAEAMELA +LV  D   E S +RL++TFP+
Sbjct: 500 VLDTMVENGCKPNETTYTMLIEGIGFAGYRAEAMELANDLVRIDAISEFSFKRLHRTFPL 559

Query: 237 LNLYKEMPQPDDH 199
           LN+ +   QP  H
Sbjct: 560 LNVLQRSSQPFVH 572


>emb|CDY50755.1| BnaAnng10620D [Brassica napus]
          Length = 572

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 40/73 (54%), Positives = 54/73 (73%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L+ MV  GC+PNETTY +L+EGI +AG+RAEAMELA +LV  D   E S +RL++TFP+
Sbjct: 500 VLDTMVENGCKPNETTYTMLIEGIGFAGYRAEAMELANDLVRIDAISEFSFKRLHRTFPL 559

Query: 237 LNLYKEMPQPDDH 199
           LN+ +   QP  H
Sbjct: 560 LNVLQRSSQPFVH 572


>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 41/71 (57%), Positives = 52/71 (73%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L  M  KGC+PNETTYILL+EGI ++G RAEAMELA  L G +   E S  RLNKTFP+
Sbjct: 510 VLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDSFNRLNKTFPL 569

Query: 237 LNLYKEMPQPD 205
           L++YK++   D
Sbjct: 570 LDVYKDLTFSD 580


>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Fragaria vesca subsp. vesca]
          Length = 586

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +   MV KGCRPNETTYILL+EGI +AG RAEAMELA+ +       E S +RL++TFPM
Sbjct: 513 VFTAMVEKGCRPNETTYILLIEGIGFAGWRAEAMELAKSVYSLSAICEDSFKRLSRTFPM 572

Query: 237 LNLYKEM 217
           L++YKE+
Sbjct: 573 LDVYKEL 579


>ref|XP_009333596.1| PREDICTED: uncharacterized protein LOC103926525 [Pyrus x
            bretschneideri]
          Length = 926

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 42/66 (63%), Positives = 48/66 (72%)
 Frame = -2

Query: 414  LEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPML 235
            L  MV KGCRPNETTY LL+EGI +AG RAEAMELA  +       E S RRLN+TFPML
Sbjct: 854  LAAMVEKGCRPNETTYTLLIEGIGFAGWRAEAMELANSVFSLRAISEDSFRRLNRTFPML 913

Query: 234  NLYKEM 217
            + YKE+
Sbjct: 914  DFYKEL 919


>ref|XP_008370748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Malus domestica]
           gi|658040468|ref|XP_008355828.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Malus domestica]
          Length = 633

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L  MV KGCRPNETTY LL+EGI +AG RAEAM+LA  +       E S RRLN+TFPM
Sbjct: 560 VLAAMVEKGCRPNETTYTLLIEGIGFAGWRAEAMQLAHSVFSIRAISEDSFRRLNRTFPM 619

Query: 237 LNLYKEM 217
           L++YKE+
Sbjct: 620 LDVYKEL 626


>ref|XP_008443759.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Cucumis melo]
          Length = 581

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 43/65 (66%), Positives = 50/65 (76%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L  MV KGC PNET+Y+LL+EGIAYAG RAEAMELA  L    V  E S +RLNKTFPM
Sbjct: 503 LLITMVEKGCPPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISEDSSKRLNKTFPM 562

Query: 237 LNLYK 223
           L++YK
Sbjct: 563 LDVYK 567


>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 40/69 (57%), Positives = 52/69 (75%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +LE MV  GCRPNETTY +L+EGI +AG+RAEAMELA +LV  D   E S +RL++TFP+
Sbjct: 530 VLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589

Query: 237 LNLYKEMPQ 211
           LN+ +   Q
Sbjct: 590 LNVLQRSSQ 598


>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
           gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical
           protein [Arabidopsis thaliana]
           gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis
           thaliana] gi|22136960|gb|AAM91709.1| unknown protein
           [Arabidopsis thaliana] gi|332640611|gb|AEE74132.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 602

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 40/69 (57%), Positives = 52/69 (75%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +LE MV  GCRPNETTY +L+EGI +AG+RAEAMELA +LV  D   E S +RL++TFP+
Sbjct: 530 VLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589

Query: 237 LNLYKEMPQ 211
           LN+ +   Q
Sbjct: 590 LNVLQRSSQ 598


>ref|XP_013750772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Brassica napus]
          Length = 572

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 39/73 (53%), Positives = 53/73 (72%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L+ MV  GC+PNETTY +L+EGI +AG+RAEAMELA +LV  D   E S +RL++TFP+
Sbjct: 500 VLDTMVENGCKPNETTYTMLIEGIGFAGYRAEAMELANDLVRIDAISEFSFKRLHRTFPL 559

Query: 237 LNLYKEMPQPDDH 199
           LN+ +   Q   H
Sbjct: 560 LNVLQRSSQTFGH 572


>gb|KDO44558.1| hypothetical protein CISIN_1g047017mg, partial [Citrus sinensis]
          Length = 534

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 38/67 (56%), Positives = 49/67 (73%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L  M  KGC+PNETTY+LL+EGI Y G RAEAMELA  LV        + +RLN+TFP+
Sbjct: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPL 520

Query: 237 LNLYKEM 217
           L++YKE+
Sbjct: 521 LDVYKEI 527


>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Citrus sinensis]
          Length = 583

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 38/67 (56%), Positives = 49/67 (73%)
 Frame = -2

Query: 417 ILEEMVVKGCRPNETTYILLVEGIAYAGHRAEAMELARELVGKDVFMEGSIRRLNKTFPM 238
           +L  M  KGC+PNETTY+LL+EGI Y G RAEAMELA  LV        + +RLN+TFP+
Sbjct: 510 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPL 569

Query: 237 LNLYKEM 217
           L++YKE+
Sbjct: 570 LDVYKEI 576