BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00003022
         (2882 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010924281.1| PREDICTED: chloroplastic group IIA intron sp...   855   0.0  
ref|XP_008787651.1| PREDICTED: chloroplastic group IIA intron sp...   845   0.0  
ref|XP_009392924.1| PREDICTED: chloroplastic group IIA intron sp...   828   0.0  
gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indi...   821   0.0  
dbj|BAS95221.1| Os05g0551900 [Oryza sativa Japonica Group]            818   0.0  
gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group] gi|...   818   0.0  
ref|XP_010265125.1| PREDICTED: chloroplastic group IIA intron sp...   816   0.0  
ref|XP_006655563.1| PREDICTED: chloroplastic group IIA intron sp...   810   0.0  
gb|KQL14454.1| hypothetical protein SETIT_021265mg [Setaria ital...   806   0.0  
ref|XP_004963613.1| PREDICTED: chloroplastic group IIA intron sp...   806   0.0  
ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theob...   804   0.0  
ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prun...   803   0.0  
ref|XP_008240263.1| PREDICTED: chloroplastic group IIA intron sp...   801   0.0  
ref|XP_008649974.1| PREDICTED: chloroplastic group IIA intron sp...   800   0.0  
ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron sp...   797   0.0  
ref|XP_010663603.1| PREDICTED: chloroplastic group IIA intron sp...   795   0.0  
ref|XP_010663604.1| PREDICTED: chloroplastic group IIA intron sp...   795   0.0  
gb|EEE64611.1| hypothetical protein OsJ_19463 [Oryza sativa Japo...   794   0.0  
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   793   0.0  
gb|KMZ62568.1| Chloroplastic group IIA intron splicing facilitat...   790   0.0  

>ref|XP_010924281.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Elaeis guineensis]
          Length = 846

 Score =  855 bits (2210), Expect = 0.0
 Identities = 446/598 (74%), Positives = 492/598 (82%), Gaps = 2/598 (0%)
 Frame = -1

Query: 2858 ESEKGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRR 2679
            E E  K+RRV+APTLAELTI           GM LRER++IPKAGVTQ I+EKIHD WR+
Sbjct: 208  EGEGLKKRRVRAPTLAELTIEDSELRRLRRHGMMLRERMTIPKAGVTQAIVEKIHDAWRK 267

Query: 2678 SELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVET 2499
            SELVRLKFHE LAHDMKTAHE+VERRTGGLVIWR+GSVMVVYRGSNYK PSRSQ   +E 
Sbjct: 268  SELVRLKFHEALAHDMKTAHELVERRTGGLVIWRSGSVMVVYRGSNYKWPSRSQSSDLEA 327

Query: 2498 SPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAECN 2319
              T++S +G TLF+P VSG        D H +SS  ++ +      + +ESMTEEEAE N
Sbjct: 328  KSTKLSDEGSTLFIPAVSGAPKLVDEKDIHSISSTAEQARPSLMIPESTESMTEEEAEYN 387

Query: 2318 LLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKLA 2139
             LLD LGPRFVDWWGTG+LPVDADLLPQ IPGYKTP RLLP GMR RLTNAEMTN+RKLA
Sbjct: 388  QLLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPMGMRSRLTNAEMTNMRKLA 447

Query: 2138 RKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGIL 1959
            + LPCHFALGRNRHHQGLA AILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGIL
Sbjct: 448  KTLPCHFALGRNRHHQGLAVAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGIL 507

Query: 1958 LLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHAL 1779
            LLRNKYYIVIYRGKDFLP +VA+AL+ERQELT+++Q++EEKA      ES  D    HAL
Sbjct: 508  LLRNKYYIVIYRGKDFLPTSVASALSERQELTRNIQDLEEKARNRMVGESHADGLGAHAL 567

Query: 1778 AGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERLL 1599
             GTLAEFQEA+ARWGR V+                 +LFK+IEHKL+IA AK  RAERLL
Sbjct: 568  VGTLAEFQEAEARWGRNVSAEEYEAMKEEASRSERAKLFKKIEHKLHIAQAKKLRAERLL 627

Query: 1598 AKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKHR 1419
            AKIEASMVPV+PSDDQE ITDEERSVFRRIGL+MK+YLPLGIRGVFDGVIENMHLHWKHR
Sbjct: 628  AKIEASMVPVSPSDDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHR 687

Query: 1418 ELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPRN 1239
            E+VKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALI+YRGKNYQRP  LRPRN
Sbjct: 688  EVVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIFYRGKNYQRPISLRPRN 747

Query: 1238 LLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPEAEESDTST--TIQSGN 1071
            LLTKAKALKRAVAMQRHEALSQHI ELEKTI++M  +LG  E EE DT+    IQ+G+
Sbjct: 748  LLTKAKALKRAVAMQRHEALSQHIIELEKTIEQMKLDLGISEGEERDTNNPQLIQTGS 805


>ref|XP_008787651.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Phoenix dactylifera]
          Length = 841

 Score =  845 bits (2182), Expect = 0.0
 Identities = 442/598 (73%), Positives = 491/598 (82%), Gaps = 2/598 (0%)
 Frame = -1

Query: 2858 ESEKGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRR 2679
            E E  K+RRVKAPTLAELTI           GM LRER++IPKAGVTQ I+ KIHD WR+
Sbjct: 205  EGEGLKKRRVKAPTLAELTIEDSELRRLRRQGMLLRERMTIPKAGVTQAIVGKIHDAWRK 264

Query: 2678 SELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVET 2499
            SELVRLKFHE LAHDMKTAHE+VERRTGGLVIWR+GSVMVVYRGSNYKRP RSQ   +ET
Sbjct: 265  SELVRLKFHEALAHDMKTAHELVERRTGGLVIWRSGSVMVVYRGSNYKRPLRSQSSDLET 324

Query: 2498 SPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAECN 2319
            + T+ S +G TLF+PDVSG    A   +   +SS  ++ +      + +ESMT EEA+ N
Sbjct: 325  NSTKFSDEGSTLFIPDVSGAPKLAD--EKQSISSTAEQARPSLMTPESTESMTGEEADFN 382

Query: 2318 LLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKLA 2139
             LLD LGPRFVDWWGTG+LPVDADLLPQ IPGYKTP RLLPTGMR RLTN+EMTNLRKLA
Sbjct: 383  QLLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNSEMTNLRKLA 442

Query: 2138 RKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGIL 1959
            + LPCHFALGRNRHHQGLA AILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGIL
Sbjct: 443  KTLPCHFALGRNRHHQGLAAAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGIL 502

Query: 1958 LLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHAL 1779
            LLRNKYYIVIYRGKDFLP +VA+ALAERQELT+++Q++EEKA       S  D  E +AL
Sbjct: 503  LLRNKYYIVIYRGKDFLPTSVASALAERQELTRNIQDLEEKARNCMAGVSHADGLEGYAL 562

Query: 1778 AGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERLL 1599
            AGTLAEFQEA+ RWGR ++                 RLFK+IEHK +IA AK  RAERLL
Sbjct: 563  AGTLAEFQEARERWGRNISAEEYEAMKEEASRSEKARLFKKIEHKFHIAEAKKLRAERLL 622

Query: 1598 AKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKHR 1419
            AKIEASM+PV+PSDDQE+ITDEERSVFRRIGL+MK+YLPLGIRGVFDGVIENMHLHWKHR
Sbjct: 623  AKIEASMIPVSPSDDQEMITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHR 682

Query: 1418 ELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPRN 1239
            ELVKLISKQKT SFVEDTA LLEYESGGILVAIERVPKGFALI+YRGKNY+RP  LRPRN
Sbjct: 683  ELVKLISKQKTPSFVEDTAHLLEYESGGILVAIERVPKGFALIFYRGKNYRRPISLRPRN 742

Query: 1238 LLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPEAEESDTST--TIQSGN 1071
            LLTKAKALKRAVAMQRHEALSQHI ELEKTI++M  +LG  E EE D++    IQSG+
Sbjct: 743  LLTKAKALKRAVAMQRHEALSQHIIELEKTIEQMKLDLGISEGEERDSNNPQLIQSGS 800


>ref|XP_009392924.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Musa acuminata subsp. malaccensis]
            gi|695012339|ref|XP_009392925.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Musa acuminata subsp. malaccensis]
            gi|695012341|ref|XP_009392926.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Musa acuminata subsp. malaccensis]
          Length = 832

 Score =  828 bits (2138), Expect = 0.0
 Identities = 429/584 (73%), Positives = 474/584 (81%)
 Frame = -1

Query: 2858 ESEKGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRR 2679
            +    KR+RV+APTLAELTI           G+ LRERI++PKAGVTQ I EKIHD WR+
Sbjct: 202  DGRDAKRKRVRAPTLAELTIEDSELRRLRRLGIMLRERITVPKAGVTQAITEKIHDAWRK 261

Query: 2678 SELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVET 2499
            SELVRLKFHE LA+DMKTAHE+VERRTGGLVIWR+GSVMVV+RGSNYKRPSRSQ L  ++
Sbjct: 262  SELVRLKFHETLANDMKTAHELVERRTGGLVIWRSGSVMVVFRGSNYKRPSRSQSLDAQS 321

Query: 2498 SPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAECN 2319
            + T +SH+  +LF+PDV          D  V SS  ++ K  + N +  E+MTEEEAE N
Sbjct: 322  NSTGLSHETESLFIPDVPNTTKLVE-DDICVTSSKTEQPKPSEMNLECDENMTEEEAEYN 380

Query: 2318 LLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKLA 2139
             LLDGLGPRFVDWWGTG+LPVDADLLPQNIPG+KTP RLLPTGMR RL N+EMTNLRKLA
Sbjct: 381  GLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFKTPFRLLPTGMRSRLNNSEMTNLRKLA 440

Query: 2138 RKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGIL 1959
            R LP HFALGRNRHH GLA AILKLWEKSLVVKIAVKRGIQNTNNKLMAEELK LTGGIL
Sbjct: 441  RTLPSHFALGRNRHHHGLAAAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKALTGGIL 500

Query: 1958 LLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHAL 1779
            LLRNKYYIVIYRGKDF+P  VA ALAER+ELTK++Q+ EE+       E C D  EEHA 
Sbjct: 501  LLRNKYYIVIYRGKDFIPTTVATALAEREELTKEIQDAEEQMRKSMIGEPCVDALEEHAP 560

Query: 1778 AGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERLL 1599
             GTLAEF EAQARWGR+++                 +LFK+IE KL +A AK  RAE+LL
Sbjct: 561  VGTLAEFLEAQARWGRDISSEECDAMKKEALRSERTKLFKKIEQKLSVAQAKKLRAEKLL 620

Query: 1598 AKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKHR 1419
            AKIEASMVPVNPS+DQE ITDEERSVFRRIGL+MK+YLPLGIRGVFDGVIENMHLHWKHR
Sbjct: 621  AKIEASMVPVNPSNDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHR 680

Query: 1418 ELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPRN 1239
            ELVKLISKQKTLSFVEDTARLLEYESGGILVAIE VPKGFALIYYRGKNYQRP  LRPRN
Sbjct: 681  ELVKLISKQKTLSFVEDTARLLEYESGGILVAIESVPKGFALIYYRGKNYQRPISLRPRN 740

Query: 1238 LLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPEAE 1107
            LLTKAKALKRAVA+QRHEALSQHI  LEKTIK+M  E+G  E E
Sbjct: 741  LLTKAKALKRAVAIQRHEALSQHIDALEKTIKQMKEEVGISEDE 784


>gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indica Group]
          Length = 801

 Score =  821 bits (2120), Expect = 0.0
 Identities = 424/586 (72%), Positives = 478/586 (81%), Gaps = 1/586 (0%)
 Frame = -1

Query: 2858 ESEKGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRR 2679
            E +  KRRRV+AP+LAELTI           GMTLR+RI++PKAGVTQ + EKIHD WR+
Sbjct: 169  EEDGVKRRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRK 228

Query: 2678 SELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVET 2499
            SELVRLKFHEDLAHDMKTAHE+VERRTGGL+IWR+GSVMVVYRGSNYKRP +S+ L   +
Sbjct: 229  SELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSETLDGNS 288

Query: 2498 SPTEVSHDGGTLFVPDVSG-VANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAEC 2322
            S   V    GTLF+PD S    +++ G D +    I     A + N Q +E MTEEE E 
Sbjct: 289  SA--VKGADGTLFIPDASSPTEHDSQGKDVNTQREI-----AARLNMQNTEDMTEEELEF 341

Query: 2321 NLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKL 2142
            N +LD LGPRFVDWWGTG+LPVDADLLPQ IPGYKTP RLLPTGMR  LTNAE+TNLRKL
Sbjct: 342  NQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKL 401

Query: 2141 ARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGI 1962
            AR LPCHFALGRNR+HQGLA AI+KLWEKSLVVKIAVKRGIQNTNNKLM+EE+K LTGG 
Sbjct: 402  ARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKNLTGGT 461

Query: 1961 LLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHA 1782
            LLLRNKYYIVIYRGKDFLP +VAAALAER+ELTKD+Q VEE+    P V S +D  + HA
Sbjct: 462  LLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKRCIPVVHSMDDSLDGHA 521

Query: 1781 LAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERL 1602
            LAGTLAEFQEAQARWGREVT                 +LFKR+EHKL IA AK+ RAERL
Sbjct: 522  LAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKRLEHKLSIAQAKIHRAERL 581

Query: 1601 LAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKH 1422
            L+KIEASMV  NPSDD+E+ITDEERSVFRRIGL++K+YLP+GIRGVFDGVIENMHLHWKH
Sbjct: 582  LSKIEASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKH 641

Query: 1421 RELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPR 1242
            RE+VKLI+KQKTL FVE+TARLLEYESGGILVAIERVPKG+ALI+YRGKNY+RP  +RPR
Sbjct: 642  REVVKLITKQKTLPFVEETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPR 701

Query: 1241 NLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPEAEE 1104
            NLLTKAKALKRAVAMQRHEALSQHIAELE  I++M  +LG    EE
Sbjct: 702  NLLTKAKALKRAVAMQRHEALSQHIAELENNIRQMKLDLGIEVDEE 747


>dbj|BAS95221.1| Os05g0551900 [Oryza sativa Japonica Group]
          Length = 782

 Score =  818 bits (2112), Expect = 0.0
 Identities = 423/586 (72%), Positives = 477/586 (81%), Gaps = 1/586 (0%)
 Frame = -1

Query: 2858 ESEKGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRR 2679
            E +  KRRRV+AP+LAELTI           GMTLR+RI++PKAGVTQ + EKIHD WR+
Sbjct: 166  EEDGVKRRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRK 225

Query: 2678 SELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVET 2499
            SELVRLKFHEDLAHDMKTAHE+VERRTGGL+IWR+GSVMVVYRGSNYKRP +S+ L   +
Sbjct: 226  SELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSETLDGNS 285

Query: 2498 SPTEVSHDGGTLFVPDVSG-VANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAEC 2322
            S   V    GTLF+PD S    +++ G D +    I     A + N Q +E MTEEE E 
Sbjct: 286  SA--VKGADGTLFIPDASSPTEHDSQGKDVNTQREI-----AARLNMQNTEDMTEEELEF 338

Query: 2321 NLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKL 2142
            N +LD LGPRFVDWWGTG+LPVDADLLPQ IPGYKTP RLLPTGMR  LTNAE+TNLRKL
Sbjct: 339  NQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKL 398

Query: 2141 ARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGI 1962
            AR LPCHFALGRNR+HQGLA AI+KLWEKSLVVKIAVKRGIQNTNNKLM+EE+K LTGG 
Sbjct: 399  ARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKNLTGGT 458

Query: 1961 LLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHA 1782
            LLLRNKYYIVIYRGKDFLP +VAAALAER+ELTKD+Q VEE+    P V S +D  + HA
Sbjct: 459  LLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKRCIPVVHSMDDSLDGHA 518

Query: 1781 LAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERL 1602
            LAGTLAEFQEAQARWGREVT                 +LFKR+EHKL IA AK+ RAERL
Sbjct: 519  LAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKRLEHKLSIAQAKIHRAERL 578

Query: 1601 LAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKH 1422
            L+KIEASMV  NPSDD+E+ITDEERSVFRRIGL++K+YLP+GIRGVFDGVIENMHLHWKH
Sbjct: 579  LSKIEASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKH 638

Query: 1421 RELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPR 1242
            RE+VKLI+KQKTL FVE+TARLLEYESGGILVAIERV KG+ALI+YRGKNY+RP  +RPR
Sbjct: 639  REVVKLITKQKTLPFVEETARLLEYESGGILVAIERVTKGYALIFYRGKNYRRPINIRPR 698

Query: 1241 NLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPEAEE 1104
            NLLTKAKALKRAVAMQRHEALSQHIAELE  I++M  +LG    EE
Sbjct: 699  NLLTKAKALKRAVAMQRHEALSQHIAELENNIRQMKLDLGIEVDEE 744


>gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group]
            gi|50878415|gb|AAT85189.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 798

 Score =  818 bits (2112), Expect = 0.0
 Identities = 423/586 (72%), Positives = 477/586 (81%), Gaps = 1/586 (0%)
 Frame = -1

Query: 2858 ESEKGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRR 2679
            E +  KRRRV+AP+LAELTI           GMTLR+RI++PKAGVTQ + EKIHD WR+
Sbjct: 166  EEDGVKRRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRK 225

Query: 2678 SELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVET 2499
            SELVRLKFHEDLAHDMKTAHE+VERRTGGL+IWR+GSVMVVYRGSNYKRP +S+ L   +
Sbjct: 226  SELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSETLDGNS 285

Query: 2498 SPTEVSHDGGTLFVPDVSG-VANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAEC 2322
            S   V    GTLF+PD S    +++ G D +    I     A + N Q +E MTEEE E 
Sbjct: 286  SA--VKGADGTLFIPDASSPTEHDSQGKDVNTQREI-----AARLNMQNTEDMTEEELEF 338

Query: 2321 NLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKL 2142
            N +LD LGPRFVDWWGTG+LPVDADLLPQ IPGYKTP RLLPTGMR  LTNAE+TNLRKL
Sbjct: 339  NQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKL 398

Query: 2141 ARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGI 1962
            AR LPCHFALGRNR+HQGLA AI+KLWEKSLVVKIAVKRGIQNTNNKLM+EE+K LTGG 
Sbjct: 399  ARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKNLTGGT 458

Query: 1961 LLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHA 1782
            LLLRNKYYIVIYRGKDFLP +VAAALAER+ELTKD+Q VEE+    P V S +D  + HA
Sbjct: 459  LLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKRCIPVVHSMDDSLDGHA 518

Query: 1781 LAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERL 1602
            LAGTLAEFQEAQARWGREVT                 +LFKR+EHKL IA AK+ RAERL
Sbjct: 519  LAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKRLEHKLSIAQAKIHRAERL 578

Query: 1601 LAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKH 1422
            L+KIEASMV  NPSDD+E+ITDEERSVFRRIGL++K+YLP+GIRGVFDGVIENMHLHWKH
Sbjct: 579  LSKIEASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKH 638

Query: 1421 RELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPR 1242
            RE+VKLI+KQKTL FVE+TARLLEYESGGILVAIERV KG+ALI+YRGKNY+RP  +RPR
Sbjct: 639  REVVKLITKQKTLPFVEETARLLEYESGGILVAIERVTKGYALIFYRGKNYRRPINIRPR 698

Query: 1241 NLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPEAEE 1104
            NLLTKAKALKRAVAMQRHEALSQHIAELE  I++M  +LG    EE
Sbjct: 699  NLLTKAKALKRAVAMQRHEALSQHIAELENNIRQMKLDLGIEVDEE 744


>ref|XP_010265125.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nelumbo nucifera]
          Length = 838

 Score =  816 bits (2108), Expect = 0.0
 Identities = 424/574 (73%), Positives = 473/574 (82%)
 Frame = -1

Query: 2843 KRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRRSELVR 2664
            K++RVKAPTLAELTI           GMTLRER++IPKAGVTQVILEKIH+ WR+SELVR
Sbjct: 219  KKKRVKAPTLAELTIEDAELRRLRTLGMTLRERVNIPKAGVTQVILEKIHEKWRKSELVR 278

Query: 2663 LKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVETSPTEV 2484
            LKFHE LAHDMKTA EIVERRTGGLVIWR+GS+MVVYRGSNY+  SR +          V
Sbjct: 279  LKFHETLAHDMKTALEIVERRTGGLVIWRSGSIMVVYRGSNYEPFSRLK---------TV 329

Query: 2483 SHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAECNLLLDG 2304
              +G  LFVPDVS  AN  S  +N ++S+   K+  +Q N   +ESMTEEEAE N LLDG
Sbjct: 330  ESEGNALFVPDVSSSANSISKINNDIMSAPEKKDPGVQ-NPNQAESMTEEEAEYNSLLDG 388

Query: 2303 LGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKLARKLPC 2124
            LGPRFVDWWGTG+LPVDADLLPQ IP YKTP RLLPTGMRPRLTNAEMTNLRKLA+ LPC
Sbjct: 389  LGPRFVDWWGTGILPVDADLLPQTIPSYKTPFRLLPTGMRPRLTNAEMTNLRKLAKSLPC 448

Query: 2123 HFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGILLLRNK 1944
            HFALGRNR+HQGLA AI+KLW+KSLV KIAVKRGIQNTNNKLMAEELKKLTGG+LLLRNK
Sbjct: 449  HFALGRNRNHQGLAAAIVKLWDKSLVAKIAVKRGIQNTNNKLMAEELKKLTGGVLLLRNK 508

Query: 1943 YYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHALAGTLA 1764
            YYIVIYRGKDFLP +VA ALAERQELTK++Q+VEEKA     V +  +     ALAGTL+
Sbjct: 509  YYIVIYRGKDFLPTSVAFALAERQELTKEIQDVEEKARSGAVVSAHVEEIGGQALAGTLS 568

Query: 1763 EFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERLLAKIEA 1584
            E++EAQARWGRE++                 +  KRIEHKL +A AK  RAE+LLAKIE 
Sbjct: 569  EYREAQARWGREISAEEHEKMKEEASRAKNAKAVKRIEHKLTVAQAKKLRAEKLLAKIEK 628

Query: 1583 SMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKHRELVKL 1404
            SMVPV PSDDQE ITDEER +FRR+GL+MK+YLPLGIRGVFDGVIENMHLHWKHRELVKL
Sbjct: 629  SMVPVGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKL 688

Query: 1403 ISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPRNLLTKA 1224
            ISKQKTLSFVEDTARLLEYESGGILVAIERVPKG+ALIYYRGKNYQRP  LRPRNLLTKA
Sbjct: 689  ISKQKTLSFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISLRPRNLLTKA 748

Query: 1223 KALKRAVAMQRHEALSQHIAELEKTIKKMTAELG 1122
            KALKR+VAMQRHEALSQHI ELE+TI++M +E+G
Sbjct: 749  KALKRSVAMQRHEALSQHITELERTIEQMKSEIG 782


>ref|XP_006655563.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Oryza brachyantha]
          Length = 760

 Score =  810 bits (2092), Expect = 0.0
 Identities = 417/586 (71%), Positives = 476/586 (81%), Gaps = 1/586 (0%)
 Frame = -1

Query: 2858 ESEKGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRR 2679
            E +  KR+RV+AP+LAELTI           GMTLR+RI++PKAGVTQ + EKIHD WR+
Sbjct: 130  EDDGVKRKRVRAPSLAELTIEDEELRRLRRMGMTLRDRITVPKAGVTQAVTEKIHDAWRK 189

Query: 2678 SELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVET 2499
            SELVRLKFHEDLAHDMKTAHE+VERRTGGL+IWR+GSVMVVYRGSNYKRP +S+ L  + 
Sbjct: 190  SELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSEAL--DG 247

Query: 2498 SPTEVSHDGGTLFVPDVSG-VANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAEC 2322
            + + V  + GTLF+PD S  + +   G D +    I     A + N Q +E MTE+E E 
Sbjct: 248  TSSAVKGEDGTLFIPDASSPIEHGNQGKDLNTQREI-----AARLNMQNAEDMTEDELEF 302

Query: 2321 NLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKL 2142
            N +LD LGPRFVDWWGTG+LPVDADLLPQ IPGYKTP RLLPTGMR  LTNAE+TNLRKL
Sbjct: 303  NQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKL 362

Query: 2141 ARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGI 1962
            AR LPCHFALGRNR+HQGLA AI+KLWEKSLVVKIAVKRGIQNTNNKLMAEE+K LTGG 
Sbjct: 363  ARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEEIKNLTGGT 422

Query: 1961 LLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHA 1782
            LLLRNKYYIVIYRGKDFLP +VAAALAER+ELTKD+Q VEE+        S +D  + HA
Sbjct: 423  LLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQRRRISIEHSTDDSLDGHA 482

Query: 1781 LAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERL 1602
            LAGTLAEFQEAQARWGREVT                 + FKR+EHKL IA AK+ RAERL
Sbjct: 483  LAGTLAEFQEAQARWGREVTVKEQEEMKEASSRSVKEKAFKRLEHKLSIAQAKIHRAERL 542

Query: 1601 LAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKH 1422
            L+KIEASMV  NPSDDQE+ITDEERSVFRRIGL++K+YLP+GIRGVFDGVIENMHLHWKH
Sbjct: 543  LSKIEASMVLANPSDDQEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKH 602

Query: 1421 RELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPR 1242
            RE+VKLI+KQKTL FVE+TARLL+YESGGILVAIERVPKG+ALI+YRGKNY+RP  +RPR
Sbjct: 603  REVVKLITKQKTLPFVEETARLLQYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPR 662

Query: 1241 NLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPEAEE 1104
            NLLTKAKALKRAVAMQRHEALS+HIA+LE  I++M  +LG    EE
Sbjct: 663  NLLTKAKALKRAVAMQRHEALSEHIAQLESNIREMKLDLGIENDEE 708


>gb|KQL14454.1| hypothetical protein SETIT_021265mg [Setaria italica]
          Length = 792

 Score =  806 bits (2083), Expect = 0.0
 Identities = 418/592 (70%), Positives = 478/592 (80%), Gaps = 3/592 (0%)
 Frame = -1

Query: 2858 ESEKGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRR 2679
            E +  KRRRVKAPTLAELTI           GMTLR+RI++PKAGVT  I EKIHD WR+
Sbjct: 164  EEDGAKRRRVKAPTLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTTAITEKIHDAWRK 223

Query: 2678 SELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVET 2499
            SELVRLKFHEDLAHDMKTAHE+VERRTGGL+IWR+GSVMVVYRGSNYKRP +SQ L   +
Sbjct: 224  SELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSQTLNGAS 283

Query: 2498 SPTEVSHDGGTLFVPDVSGVA-NEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAEC 2322
            S  +V  + G LF+PD S  A N++ G D     +      A Q N Q +E MTEEE E 
Sbjct: 284  S--QVKGEDGALFIPDASSPAENDSQGKDLAAQHA-----NASQLNMQNTEDMTEEELEF 336

Query: 2321 NLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKL 2142
            N +LD LGPRFVDWWGTG+LPVDADLLPQ IP YKTP R+LPTGMR  LTNAE+TNLRKL
Sbjct: 337  NQMLDELGPRFVDWWGTGILPVDADLLPQTIPEYKTPYRVLPTGMRSTLTNAELTNLRKL 396

Query: 2141 ARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGI 1962
            AR LPCHFALGRNR+HQGLA AI+KLWEKSLVVKIAVKRGIQNTNNKLMAEE+K LTGG 
Sbjct: 397  ARNLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEEIKNLTGGT 456

Query: 1961 LLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHA 1782
            LLLRNK+YIVIYRGKDFLP +VAA LAER+ELTKD+Q +EE+       +  +D  + HA
Sbjct: 457  LLLRNKFYIVIYRGKDFLPTSVAAVLAEREELTKDIQNMEEQRRNVSIGQPPDDGLDGHA 516

Query: 1781 LAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERL 1602
            LAGTLAEFQEAQARWGREVT                 +L++++EHKL +A AK+ RAERL
Sbjct: 517  LAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSEKQKLYRKLEHKLSVAQAKIHRAERL 576

Query: 1601 LAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKH 1422
            L+KIEASMV  +P DD+E+ITDEE+SVFRRIGL++KSYLPLG+RGVFDGVIENMHLHWKH
Sbjct: 577  LSKIEASMVLADPCDDREMITDEEKSVFRRIGLRLKSYLPLGVRGVFDGVIENMHLHWKH 636

Query: 1421 RELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPR 1242
            RE+VKLISKQKTLSFV++TARLLEYESGGILVAIERVPKG+ALI+YRGKNY+RP  +RPR
Sbjct: 637  REVVKLISKQKTLSFVQETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPR 696

Query: 1241 NLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELG--YPEAEESDTS 1092
            NLLTKAKALKRAVAMQRHEALSQHI +LE  IK+M  +LG  Y E +E D+S
Sbjct: 697  NLLTKAKALKRAVAMQRHEALSQHIDQLENNIKQMKLDLGIEYYEEQEDDSS 748


>ref|XP_004963613.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Setaria italica]
          Length = 774

 Score =  806 bits (2083), Expect = 0.0
 Identities = 418/592 (70%), Positives = 478/592 (80%), Gaps = 3/592 (0%)
 Frame = -1

Query: 2858 ESEKGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRR 2679
            E +  KRRRVKAPTLAELTI           GMTLR+RI++PKAGVT  I EKIHD WR+
Sbjct: 146  EEDGAKRRRVKAPTLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTTAITEKIHDAWRK 205

Query: 2678 SELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVET 2499
            SELVRLKFHEDLAHDMKTAHE+VERRTGGL+IWR+GSVMVVYRGSNYKRP +SQ L   +
Sbjct: 206  SELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSQTLNGAS 265

Query: 2498 SPTEVSHDGGTLFVPDVSGVA-NEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAEC 2322
            S  +V  + G LF+PD S  A N++ G D     +      A Q N Q +E MTEEE E 
Sbjct: 266  S--QVKGEDGALFIPDASSPAENDSQGKDLAAQHA-----NASQLNMQNTEDMTEEELEF 318

Query: 2321 NLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKL 2142
            N +LD LGPRFVDWWGTG+LPVDADLLPQ IP YKTP R+LPTGMR  LTNAE+TNLRKL
Sbjct: 319  NQMLDELGPRFVDWWGTGILPVDADLLPQTIPEYKTPYRVLPTGMRSTLTNAELTNLRKL 378

Query: 2141 ARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGI 1962
            AR LPCHFALGRNR+HQGLA AI+KLWEKSLVVKIAVKRGIQNTNNKLMAEE+K LTGG 
Sbjct: 379  ARNLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEEIKNLTGGT 438

Query: 1961 LLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHA 1782
            LLLRNK+YIVIYRGKDFLP +VAA LAER+ELTKD+Q +EE+       +  +D  + HA
Sbjct: 439  LLLRNKFYIVIYRGKDFLPTSVAAVLAEREELTKDIQNMEEQRRNVSIGQPPDDGLDGHA 498

Query: 1781 LAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERL 1602
            LAGTLAEFQEAQARWGREVT                 +L++++EHKL +A AK+ RAERL
Sbjct: 499  LAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSEKQKLYRKLEHKLSVAQAKIHRAERL 558

Query: 1601 LAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKH 1422
            L+KIEASMV  +P DD+E+ITDEE+SVFRRIGL++KSYLPLG+RGVFDGVIENMHLHWKH
Sbjct: 559  LSKIEASMVLADPCDDREMITDEEKSVFRRIGLRLKSYLPLGVRGVFDGVIENMHLHWKH 618

Query: 1421 RELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPR 1242
            RE+VKLISKQKTLSFV++TARLLEYESGGILVAIERVPKG+ALI+YRGKNY+RP  +RPR
Sbjct: 619  REVVKLISKQKTLSFVQETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPR 678

Query: 1241 NLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELG--YPEAEESDTS 1092
            NLLTKAKALKRAVAMQRHEALSQHI +LE  IK+M  +LG  Y E +E D+S
Sbjct: 679  NLLTKAKALKRAVAMQRHEALSQHIDQLENNIKQMKLDLGIEYYEEQEDDSS 730


>ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
            gi|508773778|gb|EOY21034.1| CRS1 / YhbY domain-containing
            protein [Theobroma cacao]
          Length = 919

 Score =  804 bits (2077), Expect = 0.0
 Identities = 415/584 (71%), Positives = 470/584 (80%)
 Frame = -1

Query: 2843 KRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRRSELVR 2664
            K+RRV+APTLAELTI           GM LRERI++PKAG+TQ +LEKIHD WR+ ELVR
Sbjct: 268  KKRRVRAPTLAELTIEDEELRRLRRMGMYLRERINVPKAGITQAVLEKIHDKWRKEELVR 327

Query: 2663 LKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVETSPTEV 2484
            LKFHE LA DMKTAHEIVERRTGGLV+WR+GSVMVVYRGSNY+ PSRSQ          +
Sbjct: 328  LKFHEVLATDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYEGPSRSQ---------SI 378

Query: 2483 SHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAECNLLLDG 2304
              +G  LF+PDVS  +N   GS+    S+ P+K + +    + SESMTEEEAE N LLDG
Sbjct: 379  DREGEALFIPDVSSASNAVRGSETGKTST-PEKCEPVVVKPERSESMTEEEAEYNSLLDG 437

Query: 2303 LGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKLARKLPC 2124
            +GPRFV+WWGTG+LPVDADLLPQ IPGYKTP RLLP GMRPRLTNAEMTNLRKLA+ LPC
Sbjct: 438  VGPRFVEWWGTGVLPVDADLLPQKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKLAKSLPC 497

Query: 2123 HFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGILLLRNK 1944
            HFALGRNR+HQGLA AI+KLWEKSLVVKIAVKRGIQNTNNKLMAEELK LTGG+LLLRNK
Sbjct: 498  HFALGRNRNHQGLAAAIIKLWEKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNK 557

Query: 1943 YYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHALAGTLA 1764
            Y+IVIYRGKDFLP +VAAALAERQELTK +Q+VEEK  I     + +  ++  A AGTLA
Sbjct: 558  YFIVIYRGKDFLPTSVAAALAERQELTKQIQDVEEKVRIRAVEPAQSGEDKGEAPAGTLA 617

Query: 1763 EFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERLLAKIEA 1584
            EF EAQA WGRE++                 RL KR+EHKL +A AK  RAERLLAKIE+
Sbjct: 618  EFYEAQACWGREISAEEREKMIEEASKAKHARLVKRVEHKLAVAQAKKLRAERLLAKIES 677

Query: 1583 SMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKHRELVKL 1404
            SM+P  P  DQE ITDEER +FRR+GL+MK YLPLGIRGVFDGVIENMHLHWKHRELVKL
Sbjct: 678  SMIPAAPDYDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKL 737

Query: 1403 ISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPRNLLTKA 1224
            ISKQKTL+FVEDTARLLE+ESGGILVAIERVPKG+ALIYYRGKNY RP  LRPRNLLTKA
Sbjct: 738  ISKQKTLAFVEDTARLLEFESGGILVAIERVPKGYALIYYRGKNYHRPISLRPRNLLTKA 797

Query: 1223 KALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPEAEESDTS 1092
            KALKR+VAMQRHEALSQHI+ELE+TI++M  E+G  +  E + S
Sbjct: 798  KALKRSVAMQRHEALSQHISELERTIEEMKKEIGASQDVEDEDS 841


>ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prunus persica]
            gi|462407043|gb|EMJ12507.1| hypothetical protein
            PRUPE_ppa001468mg [Prunus persica]
          Length = 820

 Score =  803 bits (2073), Expect = 0.0
 Identities = 420/593 (70%), Positives = 474/593 (79%), Gaps = 3/593 (0%)
 Frame = -1

Query: 2858 ESEKG-KRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWR 2682
            E  KG ++RRVKAP+LAELTI           GM LRERIS+PKAG+TQ +LEKIHD WR
Sbjct: 199  EEVKGLRKRRVKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAVLEKIHDTWR 258

Query: 2681 RSELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVE 2502
            + ELVRLKFHE LA DMKTAHEIVERRTGGLV+WR+GSVMVVYRGSNYK PS+SQ     
Sbjct: 259  KEELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYKGPSKSQ----- 313

Query: 2501 TSPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAEC 2322
                 V  +GG LF+PDVS     A+ S N   S  PD N+       +  +MTEEEAE 
Sbjct: 314  ----TVDREGGALFIPDVSSAETSATRSGNDATSG-PDNNEKAVKIPAHLPNMTEEEAEF 368

Query: 2321 NLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKL 2142
            N LLD LGPRFV+WWGTG+LPVDADLLP+ IPGYKTP RLLPTGMR RLTNAEMTNLRKL
Sbjct: 369  NSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKL 428

Query: 2141 ARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGI 1962
            A+ LPCHFALGRNR+HQGLA+AI+KLWEKS V KIAVKRGIQNTNNKLMAEELK LTGG+
Sbjct: 429  AKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAKIAVKRGIQNTNNKLMAEELKTLTGGV 488

Query: 1961 LLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHA 1782
            LLLRNKYYIV YRGKDFLP +VAAALAERQELTK VQ+VEEK  I     + +   E  A
Sbjct: 489  LLLRNKYYIVFYRGKDFLPTSVAAALAERQELTKQVQDVEEKMRIKAIDAASSGAEEGQA 548

Query: 1781 LAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERL 1602
            LAGTLAEF EAQARWGRE++                 RL KRIEHKL +A AK  RAE+L
Sbjct: 549  LAGTLAEFYEAQARWGREISAEEREKMIEEDSKAKNARLVKRIEHKLGVAQAKKLRAEKL 608

Query: 1601 LAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKH 1422
            L+KIE+SM+P  P  DQE +TDEER +FRR+GL+MK+YLPLGIRGVFDGV+ENMHLHWKH
Sbjct: 609  LSKIESSMLPAGPDYDQETVTDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKH 668

Query: 1421 RELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPR 1242
            RELVKLISKQKTL+FVEDTARLLE+ESGGILVAIERVPKG+ALIYYRGKNYQRP  LRPR
Sbjct: 669  RELVKLISKQKTLAFVEDTARLLEFESGGILVAIERVPKGYALIYYRGKNYQRPITLRPR 728

Query: 1241 NLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPE--AEESDTST 1089
            NLLTKAKALKR+VA+QRHEALSQHI+ELEKTI++M++E+G  E  A+ES  S+
Sbjct: 729  NLLTKAKALKRSVAIQRHEALSQHISELEKTIEQMSSEIGVSEDIADESTWSS 781


>ref|XP_008240263.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Prunus mume]
          Length = 820

 Score =  801 bits (2070), Expect = 0.0
 Identities = 417/583 (71%), Positives = 469/583 (80%), Gaps = 1/583 (0%)
 Frame = -1

Query: 2858 ESEKG-KRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWR 2682
            E  KG ++RRVKAP+LAELTI           GM LRERIS+PKAG+TQ +LEKIHD WR
Sbjct: 199  EEVKGLRKRRVKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAVLEKIHDTWR 258

Query: 2681 RSELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVE 2502
            + ELVRLKFHE LA DMKTAHEIVERRTGGLV+WR+GSVMVVYRGSNYK PS+SQ     
Sbjct: 259  KEELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYKGPSKSQ----- 313

Query: 2501 TSPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAEC 2322
                 V  +GG LF+PDVS     A+ S N   S   +  KA++    +  +MTEEEAE 
Sbjct: 314  ----TVDGEGGALFIPDVSSAETSATRSGNDATSGPDNTEKAVKIP-AHLPNMTEEEAEF 368

Query: 2321 NLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKL 2142
            N LLD LGPRFV+WWGTG+LPVDADLLP+ IPGYKTP RLLPTGMR RLTNAEMTNLRKL
Sbjct: 369  NSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKL 428

Query: 2141 ARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGI 1962
            A+ LPCHFALGRNR+HQGLA+AI+KLWEKS V KIAVKRGIQNTNNKLMAEELK LTGG+
Sbjct: 429  AKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAKIAVKRGIQNTNNKLMAEELKTLTGGV 488

Query: 1961 LLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHA 1782
            LLLRNKYYIV YRGKDFLP +VAAALAERQELTK VQ+VEEK  I     + +   E  A
Sbjct: 489  LLLRNKYYIVFYRGKDFLPTSVAAALAERQELTKQVQDVEEKMRIKAIDTASSGAEEGQA 548

Query: 1781 LAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERL 1602
            LAGTLAEF EAQARWGRE++                 RL KRIEHKL +A AK  RAE+L
Sbjct: 549  LAGTLAEFYEAQARWGREISAEEREKMIEEDSKAKNARLVKRIEHKLGVAQAKKLRAEKL 608

Query: 1601 LAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKH 1422
            L+KIE+SM+P  P  DQE +TDEER +FRR+GL+MK+YLPLGIRGVFDGV+ENMHLHWKH
Sbjct: 609  LSKIESSMLPAGPDYDQETVTDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKH 668

Query: 1421 RELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPR 1242
            RELVKLISKQKTL+FVEDTARLLE+ESGGILVAIERVPKGFALIYYRGKNYQRP  LRPR
Sbjct: 669  RELVKLISKQKTLAFVEDTARLLEFESGGILVAIERVPKGFALIYYRGKNYQRPITLRPR 728

Query: 1241 NLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPE 1113
            NLLTKAKALKR+VAMQRHEALSQHI+ELEKTI++M++E+G  E
Sbjct: 729  NLLTKAKALKRSVAMQRHEALSQHISELEKTIEQMSSEIGVSE 771


>ref|XP_008649974.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Zea mays]
          Length = 795

 Score =  800 bits (2066), Expect = 0.0
 Identities = 414/597 (69%), Positives = 474/597 (79%), Gaps = 6/597 (1%)
 Frame = -1

Query: 2858 ESEKGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWRR 2679
            E +  KRRRVKAPTLAELTI           GMTLR+RI++PKAGVT  + EKIHD WR+
Sbjct: 168  EEDGTKRRRVKAPTLAELTIEDGELRRLRRLGMTLRDRITVPKAGVTTAVTEKIHDAWRK 227

Query: 2678 SELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVET 2499
            SELVRLKFHEDLAHDMKTAHE+VERRTGGL+IWR+GSVMVVYRGSNYKRP +SQ L   +
Sbjct: 228  SELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSQALNGAS 287

Query: 2498 SPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQ------TNFQYSESMTE 2337
            SP  V  + G LF+PD S          N V S+I     A Q       N Q +E MTE
Sbjct: 288  SP--VKGEDGALFIPDAS----------NPVESNIQGTGLATQYANVSLLNSQNTEDMTE 335

Query: 2336 EEAECNLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMT 2157
            EE E N +LD LGPRFVDWWGTG+LPVDADLLPQ IPGYKTP R+LPTGMR  LTNAE+T
Sbjct: 336  EELEFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPYRVLPTGMRSTLTNAELT 395

Query: 2156 NLRKLARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKK 1977
            NLRKLAR LPCHFALGRNR+HQGL+ AI+KLWEKSLVVKIAVKRGIQNTNNK+MAEE+K 
Sbjct: 396  NLRKLARNLPCHFALGRNRNHQGLSAAIVKLWEKSLVVKIAVKRGIQNTNNKIMAEEIKN 455

Query: 1976 LTGGILLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDR 1797
            LTGG LLLRNK+YIVIYRGKDFLP +VAA LAER+ELTKD+  +EE+       +  +D 
Sbjct: 456  LTGGTLLLRNKFYIVIYRGKDFLPTSVAAVLAEREELTKDIYNMEEQRRRVLITQPSDDG 515

Query: 1796 NEEHALAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMS 1617
             + HALAGTLAEFQEAQARWGREVT                 +L++++EHKL IA AK+ 
Sbjct: 516  LDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSEKQKLYRKLEHKLSIAQAKIH 575

Query: 1616 RAERLLAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMH 1437
            RAERLL+KIEAS+V  +P DDQE+ITDEE+SVFRRIGL++K+YLPLG+RGVFDGVIENMH
Sbjct: 576  RAERLLSKIEASLVLADPCDDQEMITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMH 635

Query: 1436 LHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPF 1257
            LHWKHRE+VKLISKQKTLSFVE+TARLL YESGGILVAIERVPKG+ALI+YRGKNY+RP 
Sbjct: 636  LHWKHREVVKLISKQKTLSFVEETARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPI 695

Query: 1256 CLRPRNLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPEAEESDTSTT 1086
             +RPRNLLTKAKALKRAVAMQRHEALSQHI +LE  IK+M  +LG  + EE D  ++
Sbjct: 696  NIRPRNLLTKAKALKRAVAMQRHEALSQHIDQLESNIKQMKLDLGIEDYEEQDEDSS 752


>ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Brachypodium distachyon]
            gi|721635775|ref|XP_010231061.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Brachypodium distachyon] gi|944069532|gb|KQK05016.1|
            hypothetical protein BRADI_2g17390 [Brachypodium
            distachyon] gi|944069533|gb|KQK05017.1| hypothetical
            protein BRADI_2g17390 [Brachypodium distachyon]
            gi|944069534|gb|KQK05018.1| hypothetical protein
            BRADI_2g17390 [Brachypodium distachyon]
          Length = 782

 Score =  797 bits (2058), Expect = 0.0
 Identities = 408/592 (68%), Positives = 475/592 (80%), Gaps = 1/592 (0%)
 Frame = -1

Query: 2858 ESEKG-KRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIHDFWR 2682
            E E G KR+RVKAP+LAELT+           GMTLR+RI++PKAGVTQ + EKIHD WR
Sbjct: 160  EEEGGAKRKRVKAPSLAELTMDDAELRRLRGMGMTLRDRITVPKAGVTQAVTEKIHDAWR 219

Query: 2681 RSELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQFLGVE 2502
            +SELVRLKFHEDLA+DMKTAHE+VERRTGGL+IWRAGSVMVVYRG+NY RP++SQ L   
Sbjct: 220  KSELVRLKFHEDLANDMKTAHELVERRTGGLIIWRAGSVMVVYRGNNYTRPTKSQTLD-G 278

Query: 2501 TSPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEEEAEC 2322
            TS T    D  TLF+PD S  A     +DN         +   + N   ++ MTEEE E 
Sbjct: 279  TSSTRKGEDN-TLFIPDASSPAE----NDNQGKDLTAQHDNLSRLNIHNTDDMTEEELEF 333

Query: 2321 NLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTNLRKL 2142
            N +LD LGPRFVDWWGTG+LPVDADLLPQ IPGYK P RLLPTGMR  LTNAE+TNLRKL
Sbjct: 334  NQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKAPFRLLPTGMRTSLTNAELTNLRKL 393

Query: 2141 ARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGI 1962
            AR LPCHFALGRNR+HQGLA+AI+KLWEKSLVVKIAVKRGIQNTNN+LM++E+KKLTGG 
Sbjct: 394  ARSLPCHFALGRNRNHQGLASAIIKLWEKSLVVKIAVKRGIQNTNNELMSDEIKKLTGGT 453

Query: 1961 LLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVESCNDRNEEHA 1782
            LLLRNKY+IVIYRGKDFLP +VA ALAER+ELTKD+Q VEE+    P   S  D  + HA
Sbjct: 454  LLLRNKYFIVIYRGKDFLPQSVAVALAEREELTKDIQNVEEQRRCTPIAHSPEDGFDGHA 513

Query: 1781 LAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKMSRAERL 1602
            L GTLAEFQEAQARWGR+VT                 ++F+R+EHKL IA AK+ RA +L
Sbjct: 514  LVGTLAEFQEAQARWGRDVTSKEQEEMKEASSRLEKEKIFRRLEHKLSIAQAKIHRAGKL 573

Query: 1601 LAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENMHLHWKH 1422
            L+KIEASM+  NPSDD+E+ITDEERSVFRRIGL+MK+YLP+GIRGVFDGVIENMHLHWKH
Sbjct: 574  LSKIEASMILANPSDDREMITDEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKH 633

Query: 1421 RELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPR 1242
            RE+VKLI+KQKTL+FV +TARLLEYESGGILVA+ERVPKG+ALI+YRGKNY+RP  +RPR
Sbjct: 634  REVVKLITKQKTLAFVNETARLLEYESGGILVAVERVPKGYALIFYRGKNYRRPINIRPR 693

Query: 1241 NLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPEAEESDTSTT 1086
            NLLTKAKALKRAVAMQRHEALSQHIA+LE  +K+M  +LG  + +E D  ++
Sbjct: 694  NLLTKAKALKRAVAMQRHEALSQHIAQLESNMKQMKFDLGMEDYDEEDEDSS 745


>ref|XP_010663603.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera]
          Length = 833

 Score =  795 bits (2054), Expect = 0.0
 Identities = 419/603 (69%), Positives = 481/603 (79%), Gaps = 6/603 (0%)
 Frame = -1

Query: 2876 RG*EAVESE---KGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVIL 2706
            RG E  E E   + KRR V+APTLAELTI           GMT+RERI++PKAG+TQ +L
Sbjct: 186  RGEERQEEEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVL 245

Query: 2705 EKIHDFWRRSELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPS 2526
             KIH+ WR+ ELVRLKFHE LAHDMKTAHEIVERRTGGLV WR+GSVMVV+RG+NY+ P 
Sbjct: 246  GKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPP 305

Query: 2525 RSQFLGVETSPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSES 2346
            +         P  V  +G +LFVPDVS V N A  +DN+   ++ +K      N  ++E+
Sbjct: 306  K---------PQPVDGEGDSLFVPDVSSVDNPAMRNDNNGGPTL-EKGSLPVRNPVHAEN 355

Query: 2345 MTEEEAECNLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNA 2166
            MTEEEAE N LLDGLGPRFVDWWGTG+LPVD DLLPQ+IPGYKTPLR+LPTGMRPRLTNA
Sbjct: 356  MTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRPRLTNA 415

Query: 2165 EMTNLRKLARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEE 1986
            EMTNLRKLA+ LPCHFALGRNR+HQGLA AI+KLWEKS+VVKIAVK GIQNTNNKLMAEE
Sbjct: 416  EMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKLMAEE 475

Query: 1985 LKKLTGGILLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVES- 1809
            +K LTGG+LLLRNKYYIVIYRGKDFLP +VAAAL+ER+ELTK +Q VEEK     G E+ 
Sbjct: 476  IKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEKVRT-GGAEAI 534

Query: 1808 -CNDRNEEHALAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIA 1632
               +      LAGTLAEF EAQARWGRE++                 R+ KRIEHKL +A
Sbjct: 535  PSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALA 594

Query: 1631 NAKMSRAERLLAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGV 1452
             AK  RAERLLAKIEASM+P  PSDDQE ITDEER +FRR+GL+MK+YL LG+RGVFDGV
Sbjct: 595  QAKKLRAERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGV 654

Query: 1451 IENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKN 1272
            IENMHLHWKHRELVKLISKQKTL+FVEDTARLLEYESGGILVAIERVPKG+ALIYYRGKN
Sbjct: 655  IENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKN 714

Query: 1271 YQRPFCLRPRNLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELG-YPEAEESDT 1095
            Y+RP  LRPRNLLTKAKALKR+VAMQRHEALSQHI+ELE+TI++M  E+G   +AE+ D+
Sbjct: 715  YRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGDSKDAEDKDS 774

Query: 1094 STT 1086
             +T
Sbjct: 775  WST 777


>ref|XP_010663604.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
            gi|297734212|emb|CBI15459.3| unnamed protein product
            [Vitis vinifera]
          Length = 830

 Score =  795 bits (2054), Expect = 0.0
 Identities = 419/603 (69%), Positives = 481/603 (79%), Gaps = 6/603 (0%)
 Frame = -1

Query: 2876 RG*EAVESE---KGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVIL 2706
            RG E  E E   + KRR V+APTLAELTI           GMT+RERI++PKAG+TQ +L
Sbjct: 186  RGEERQEEEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVL 245

Query: 2705 EKIHDFWRRSELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPS 2526
             KIH+ WR+ ELVRLKFHE LAHDMKTAHEIVERRTGGLV WR+GSVMVV+RG+NY+ P 
Sbjct: 246  GKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPP 305

Query: 2525 RSQFLGVETSPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSES 2346
            +         P  V  +G +LFVPDVS V N A  +DN+   ++ +K      N  ++E+
Sbjct: 306  K---------PQPVDGEGDSLFVPDVSSVDNPAMRNDNNGGPTL-EKGSLPVRNPVHAEN 355

Query: 2345 MTEEEAECNLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNA 2166
            MTEEEAE N LLDGLGPRFVDWWGTG+LPVD DLLPQ+IPGYKTPLR+LPTGMRPRLTNA
Sbjct: 356  MTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRPRLTNA 415

Query: 2165 EMTNLRKLARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEE 1986
            EMTNLRKLA+ LPCHFALGRNR+HQGLA AI+KLWEKS+VVKIAVK GIQNTNNKLMAEE
Sbjct: 416  EMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKLMAEE 475

Query: 1985 LKKLTGGILLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVES- 1809
            +K LTGG+LLLRNKYYIVIYRGKDFLP +VAAAL+ER+ELTK +Q VEEK     G E+ 
Sbjct: 476  IKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEKVRT-GGAEAI 534

Query: 1808 -CNDRNEEHALAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIA 1632
               +      LAGTLAEF EAQARWGRE++                 R+ KRIEHKL +A
Sbjct: 535  PSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALA 594

Query: 1631 NAKMSRAERLLAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGV 1452
             AK  RAERLLAKIEASM+P  PSDDQE ITDEER +FRR+GL+MK+YL LG+RGVFDGV
Sbjct: 595  QAKKLRAERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGV 654

Query: 1451 IENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKN 1272
            IENMHLHWKHRELVKLISKQKTL+FVEDTARLLEYESGGILVAIERVPKG+ALIYYRGKN
Sbjct: 655  IENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKN 714

Query: 1271 YQRPFCLRPRNLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELG-YPEAEESDT 1095
            Y+RP  LRPRNLLTKAKALKR+VAMQRHEALSQHI+ELE+TI++M  E+G   +AE+ D+
Sbjct: 715  YRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGDSKDAEDKDS 774

Query: 1094 STT 1086
             +T
Sbjct: 775  WST 777


>gb|EEE64611.1| hypothetical protein OsJ_19463 [Oryza sativa Japonica Group]
          Length = 601

 Score =  794 bits (2051), Expect = 0.0
 Identities = 408/554 (73%), Positives = 459/554 (82%), Gaps = 1/554 (0%)
 Frame = -1

Query: 2762 MTLRERISIPKAGVTQVILEKIHDFWRRSELVRLKFHEDLAHDMKTAHEIVERRTGGLVI 2583
            MTLR+RI++PKAGVTQ + EKIHD WR+SELVRLKFHEDLAHDMKTAHE+VERRTGGL+I
Sbjct: 1    MTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLII 60

Query: 2582 WRAGSVMVVYRGSNYKRPSRSQFLGVETSPTEVSHDGGTLFVPDVSG-VANEASGSDNHV 2406
            WR+GSVMVVYRGSNYKRP +S+ L   +S   V    GTLF+PD S    +++ G D + 
Sbjct: 61   WRSGSVMVVYRGSNYKRPLKSETLDGNSSA--VKGADGTLFIPDASSPTEHDSQGKDVNT 118

Query: 2405 VSSIPDKNKALQTNFQYSESMTEEEAECNLLLDGLGPRFVDWWGTGLLPVDADLLPQNIP 2226
               I     A + N Q +E MTEEE E N +LD LGPRFVDWWGTG+LPVDADLLPQ IP
Sbjct: 119  QREI-----AARLNMQNTEDMTEEELEFNQMLDELGPRFVDWWGTGILPVDADLLPQTIP 173

Query: 2225 GYKTPLRLLPTGMRPRLTNAEMTNLRKLARKLPCHFALGRNRHHQGLATAILKLWEKSLV 2046
            GYKTP RLLPTGMR  LTNAE+TNLRKLAR LPCHFALGRNR+HQGLA AI+KLWEKSLV
Sbjct: 174  GYKTPFRLLPTGMRLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLV 233

Query: 2045 VKIAVKRGIQNTNNKLMAEELKKLTGGILLLRNKYYIVIYRGKDFLPPAVAAALAERQEL 1866
            VKIAVKRGIQNTNNKLM+EE+K LTGG LLLRNKYYIVIYRGKDFLP +VAAALAER+EL
Sbjct: 234  VKIAVKRGIQNTNNKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREEL 293

Query: 1865 TKDVQEVEEKAHIFPGVESCNDRNEEHALAGTLAEFQEAQARWGREVTXXXXXXXXXXXX 1686
            TKD+Q VEE+    P V S +D  + HALAGTLAEFQEAQARWGREVT            
Sbjct: 294  TKDIQNVEEQKRCIPVVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASS 353

Query: 1685 XXXXXRLFKRIEHKLYIANAKMSRAERLLAKIEASMVPVNPSDDQEIITDEERSVFRRIG 1506
                 +LFKR+EHKL IA AK+ RAERLL+KIEASMV  NPSDD+E+ITDEERSVFRRIG
Sbjct: 354  RSVKEKLFKRLEHKLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITDEERSVFRRIG 413

Query: 1505 LQMKSYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILV 1326
            L++K+YLP+GIRGVFDGVIENMHLHWKHRE+VKLI+KQKTL FVE+TARLLEYESGGILV
Sbjct: 414  LRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYESGGILV 473

Query: 1325 AIERVPKGFALIYYRGKNYQRPFCLRPRNLLTKAKALKRAVAMQRHEALSQHIAELEKTI 1146
            AIERV KG+ALI+YRGKNY+RP  +RPRNLLTKAKALKRAVAMQRHEALSQHIAELE  I
Sbjct: 474  AIERVTKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAELENNI 533

Query: 1145 KKMTAELGYPEAEE 1104
            ++M  +LG    EE
Sbjct: 534  RQMKLDLGIEVDEE 547


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  793 bits (2049), Expect = 0.0
 Identities = 418/603 (69%), Positives = 480/603 (79%), Gaps = 6/603 (0%)
 Frame = -1

Query: 2876 RG*EAVESE---KGKRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVIL 2706
            RG E  E E   + KRR V+APTLAELTI           GMT+RERI++PKAG+TQ +L
Sbjct: 186  RGEERQEEEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVL 245

Query: 2705 EKIHDFWRRSELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPS 2526
             KIH+ WR+ ELVRLKFHE LAHDMKTAHEIVERRTGGLV WR+GSVMVV+RG+NY+ P 
Sbjct: 246  GKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPP 305

Query: 2525 RSQFLGVETSPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSES 2346
            +         P  V  +G +LFVPDVS V N A  +DN+   ++ +K      N  ++E+
Sbjct: 306  K---------PQPVDGEGDSLFVPDVSSVDNPAMRNDNNGGPTL-EKGSLPVRNPVHAEN 355

Query: 2345 MTEEEAECNLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNA 2166
            MTEEEAE N LLDGLGPRFVDWWGTG+LPVD DLLPQ+IPGYKTPLR+LPTGMRPRLTNA
Sbjct: 356  MTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRPRLTNA 415

Query: 2165 EMTNLRKLARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEE 1986
            EMTNLRKLA+ LPCHFALGRNR+HQGLA AI+KLWEKS+VVKIAVK GIQNTNNKLMAEE
Sbjct: 416  EMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKLMAEE 475

Query: 1985 LKKLTGGILLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAHIFPGVES- 1809
            +K LTGG+LLLRNKYYIVIYRGKDFLP +VAAAL+ER+ELTK +Q VEEK     G E+ 
Sbjct: 476  IKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEKVRT-GGAEAI 534

Query: 1808 -CNDRNEEHALAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIA 1632
               +      LAGTLAEF EAQARWGRE++                 R+ KRIEHKL +A
Sbjct: 535  PSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALA 594

Query: 1631 NAKMSRAERLLAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGV 1452
             AK  R ERLLAKIEASM+P  PSDDQE ITDEER +FRR+GL+MK+YL LG+RGVFDGV
Sbjct: 595  QAKKLRPERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGV 654

Query: 1451 IENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKN 1272
            IENMHLHWKHRELVKLISKQKTL+FVEDTARLLEYESGGILVAIERVPKG+ALIYYRGKN
Sbjct: 655  IENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKN 714

Query: 1271 YQRPFCLRPRNLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELG-YPEAEESDT 1095
            Y+RP  LRPRNLLTKAKALKR+VAMQRHEALSQHI+ELE+TI++M  E+G   +AE+ D+
Sbjct: 715  YRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGDSKDAEDKDS 774

Query: 1094 STT 1086
             +T
Sbjct: 775  WST 777


>gb|KMZ62568.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Zostera
            marina]
          Length = 867

 Score =  790 bits (2039), Expect = 0.0
 Identities = 414/589 (70%), Positives = 469/589 (79%), Gaps = 4/589 (0%)
 Frame = -1

Query: 2867 EAVESEKG--KRRRVKAPTLAELTIXXXXXXXXXXDGMTLRERISIPKAGVTQVILEKIH 2694
            E   SE G  +++RV+APTLAELTI           GM LRER +IPKAGVT+VI+E IH
Sbjct: 211  EEKRSEDGNLRKKRVRAPTLAELTIEDSELRRLRTAGMALRERTTIPKAGVTRVIVEAIH 270

Query: 2693 DFWRRSELVRLKFHEDLAHDMKTAHEIVERRTGGLVIWRAGSVMVVYRGSNYKRPSRSQF 2514
            D WR+SELVRLKFHE LAHDMKTAH+IVERRTGGLV+WRAGSVMVVYRGS YKRP  SQ 
Sbjct: 271  DVWRKSELVRLKFHETLAHDMKTAHDIVERRTGGLVVWRAGSVMVVYRGSTYKRPPTSQS 330

Query: 2513 LGVETSPTEVSHDGGTLFVPDVSGVANEASGSDNHVVSSIPDKNKALQTNFQYSESMTEE 2334
               ++S TEV  +G  + VPDVS ++    GS +    S  + N +   N Q S  +TEE
Sbjct: 331  FDGKSSSTEVIEEGNVISVPDVSKISMATVGSSDDDSLS-HEVNASSPLNAQ-SVEITEE 388

Query: 2333 EAECNLLLDGLGPRFVDWWGTGLLPVDADLLPQNIPGYKTPLRLLPTGMRPRLTNAEMTN 2154
            EAE NLLLDG+GPRF DWWGTG LPVDADLLPQ IPGYK P RLLPTGMR RLTNAE+TN
Sbjct: 389  EAEYNLLLDGVGPRFFDWWGTGFLPVDADLLPQTIPGYKAPFRLLPTGMRSRLTNAELTN 448

Query: 2153 LRKLARKLPCHFALGRNRHHQGLATAILKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKL 1974
            LRKLARKLPCHFALGRNR+H GLA AI+ LWEKSLVVKIAVKRGIQNTNNKLMA+ELK L
Sbjct: 449  LRKLARKLPCHFALGRNRNHHGLAAAIVDLWEKSLVVKIAVKRGIQNTNNKLMADELKTL 508

Query: 1973 TGGILLLRNKYYIVIYRGKDFLPPAVAAALAERQELTKDVQEVEEKAH--IFPGVESCND 1800
            TGGILL RNKYYIVIYRGKDFLP +VA ALAERQELTKD+QEVEE+A   +     S  +
Sbjct: 509  TGGILLQRNKYYIVIYRGKDFLPTSVATALAERQELTKDIQEVEERARGSVTDVYLSQPN 568

Query: 1799 RNEEHALAGTLAEFQEAQARWGREVTXXXXXXXXXXXXXXXXXRLFKRIEHKLYIANAKM 1620
              E HA  GTL EFQEAQARWG+E++                 +  K+IEHKL +A +K 
Sbjct: 569  DIEGHAPVGTLEEFQEAQARWGKEISAEEREEMKKEASKSLVIKFVKKIEHKLSLAQSKK 628

Query: 1619 SRAERLLAKIEASMVPVNPSDDQEIITDEERSVFRRIGLQMKSYLPLGIRGVFDGVIENM 1440
             RAE LLAKIE+SM+PV+PSDDQE IT+EERSVFRRIGL+MK+YLP+GIRGVFDGVIENM
Sbjct: 629  LRAETLLAKIESSMLPVSPSDDQETITEEERSVFRRIGLRMKAYLPIGIRGVFDGVIENM 688

Query: 1439 HLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYQRP 1260
            HLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKG+ LIYYRGKNY+RP
Sbjct: 689  HLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAIERVPKGYCLIYYRGKNYRRP 748

Query: 1259 FCLRPRNLLTKAKALKRAVAMQRHEALSQHIAELEKTIKKMTAELGYPE 1113
              +RPRNLLTKAKALKR+V MQRHEALSQHI+ELE+T+++   +L  P+
Sbjct: 749  ISIRPRNLLTKAKALKRSVGMQRHEALSQHISELERTVEQYKLQLDDPD 797