BLASTX nr result

ID: Ophiopogon21_contig00000349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00000349
         (514 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905...    64   4e-08
gb|AJE29370.1| putative gag protein [Coffea canephora]                 60   5e-07
ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766...    56   9e-06

>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
           subsp. vulgaris]
          Length = 2676

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 37/113 (32%), Positives = 54/113 (47%)
 Frame = +2

Query: 5   HVCSHKDMFDSFDAKEEGTVKMVDGSACRVIXXXXXXXXXXXXXXRALEAVRYVPEARYN 184
           HV  +KDMF S++    GTV M + + C+V+              R L  VR+VPE + N
Sbjct: 301 HVTPYKDMFTSYEEFNGGTVTMGNNATCKVVGIGSVDITMFDGTVRTLSKVRHVPEMKKN 360

Query: 185 LISIRVLDEEGCRIXXXXXXXXXXXXDMFIMEGELCGGLYKLKEGNSVRGGVS 343
           LIS+  LD  GC+              + +M+G   G LY L +G+ V G  +
Sbjct: 361 LISLGTLDNNGCKYIAEGGVLNVIRGALVLMKGIKRGSLYVL-QGSMVSGSAN 412


>gb|AJE29370.1| putative gag protein [Coffea canephora]
          Length = 433

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
 Frame = +2

Query: 5   HVCSHKDMFDSFDAKEEGTVKMVDGSACRVIXXXXXXXXXXXXXXRALEAVRYVPEARYN 184
           HVCS  D FD+   K+ G + + DGS C+V               R+L  V YVP+ R N
Sbjct: 292 HVCSRLDYFDTLQRKKAGFMCLGDGSTCQVKGVGVVKIKMLNGEIRSLGGVAYVPKLRRN 351

Query: 185 LISIRVLDEEGCRIXXXXXXXXXXXXDMFIMEGELCGGLYKLKEG-NSVRGGVSRKSLEG 361
           LIS+  LD EG               +  ++ G+  G LY L    +  + G+ + S   
Sbjct: 352 LISLNQLDSEGYHFSAASGVLKITYGETVLLMGKKYGNLYHLNTSMDWEQNGIQKCS--- 408

Query: 362 SSSRGGASKKTATG 403
             + GG  K  A G
Sbjct: 409 QITNGGERKNPAMG 422


>ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766925 [Gossypium
           raimondii]
          Length = 217

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 36/122 (29%), Positives = 55/122 (45%)
 Frame = +2

Query: 5   HVCSHKDMFDSFDAKEEGTVKMVDGSACRVIXXXXXXXXXXXXXXRALEAVRYVPEARYN 184
           H+C +KD F S    E G V M + SAC+ +              + L  VRY+P  + N
Sbjct: 17  HMCPNKDWFSSLKELEGGIVFMGNDSACKTMGVGTIQLKNHDGLIQVLTDVRYIPSLKKN 76

Query: 185 LISIRVLDEEGCRIXXXXXXXXXXXXDMFIMEGELCGGLYKLKEGNSVRGGVSRKSLEGS 364
           LIS+ VL+ +G  I             + +M+G     LY L  G+++ G  S  S + +
Sbjct: 77  LISLGVLESKGLTITLRDGLLKVVAGILTVMKGTRRNNLYYL-NGSTIIGSTSTASTKDA 135

Query: 365 SS 370
            S
Sbjct: 136 DS 137


Top