BLASTX nr result

ID: Ophiopogon21_contig00000270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00000270
         (2062 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010906303.1| PREDICTED: cyclin-A3-1-like [Elaeis guineensis]    61   5e-06
ref|XP_009381719.1| PREDICTED: cyclin-A3-2-like [Musa acuminata ...    60   8e-06
gb|EMT09599.1| Cyclin-A3-1 [Aegilops tauschii]                         60   8e-06

>ref|XP_010906303.1| PREDICTED: cyclin-A3-1-like [Elaeis guineensis]
          Length = 109

 Score = 60.8 bits (146), Expect = 5e-06
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +2

Query: 1682 LALYVSELSLPDYSFCLWFLPSLVAASAIFLARLTVNPNAYPWV 1813
            L  Y+ ELSL DY  C+WFLPSLV AS +F+ARLT+NP ++PW+
Sbjct: 18   LGNYLIELSLLDYG-CVWFLPSLVVASIVFIARLTINPKSHPWL 60


>ref|XP_009381719.1| PREDICTED: cyclin-A3-2-like [Musa acuminata subsp. malaccensis]
          Length = 212

 Score = 60.1 bits (144), Expect = 8e-06
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = +2

Query: 1682 LALYVSELSLPDYSFCLWFLPSLVAASAIFLARLTVNPNAYPW 1810
            LA Y+ EL+L DY  C+WFLPS+VAASA+F+AR T++P ++PW
Sbjct: 91   LASYLGELTLMDYG-CVWFLPSVVAASAVFVARFTLDPRSHPW 132


>gb|EMT09599.1| Cyclin-A3-1 [Aegilops tauschii]
          Length = 362

 Score = 60.1 bits (144), Expect = 8e-06
 Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
 Frame = +2

Query: 1511 SPLNISLSLYLFLTLY---HFLPLSRKILNRVYFF*SRV*SLLDSRICLSFLQYDDRWRL 1681
            SP N+    Y+    Y     + + R ILN + F      +    R+ +   Q D ++  
Sbjct: 233  SPPNVEDFCYITDNTYMKQELVKMERDILNNLKFEMGNPTAKTFLRMFIKSGQEDKKYPS 292

Query: 1682 LAL-----YVSELSLPDYSFCLWFLPSLVAASAIFLARLTVNPNAYPWV--IINFLRPGM 1840
            L L     Y++ELSL DY  C+ FLPS VAASA+F+ARLT+NP++ PW   + + L P  
Sbjct: 293  LLLEFMGSYLTELSLLDYG-CVRFLPSAVAASAVFVARLTLNPDSNPWFKGVSSLLPPVG 351

Query: 1841 LIDLFFESL 1867
            +   +FE L
Sbjct: 352  IPASYFEDL 360


Top