BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00046041
         (265 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexic...    43   2e-08
gb|AAV31288.1| putative polyprotein [Oryza sativa Japonica Group]      45   2e-08
gb|ABA98151.1| retrotransposon protein, putative, Ty3-gypsy subc...    45   1e-07
gb|AAT73648.1| putative polyprotein [Oryza sativa Japonica Group]      39   8e-07
gb|AAX95261.1| retrotransposon protein, putative, Ty3-gypsy sub-...    41   2e-06
emb|CAN73773.1| hypothetical protein VITISV_007502 [Vitis vinifera]    42   4e-06

>gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexicana]
          Length = 1604

 Score = 43.1 bits (100), Expect(2) = 2e-08
 Identities = 21/36 (58%), Positives = 24/36 (66%)
 Frame = +2

Query: 158  YTIHRLP*EYRMYQDLKKKFWRNGTKRDIASFVGRC 265
            Y+IH  P   +MYQDLKKKFW  G KR+IA  V  C
Sbjct: 1191 YSIH--PGSEKMYQDLKKKFWWYGMKREIAEHVAMC 1224



 Score = 41.2 bits (95), Expect(2) = 2e-08
 Identities = 20/60 (33%), Positives = 35/60 (58%)
 Frame = +3

Query: 6    DETLEKIRLNIRMREPGNYREEAVNAITVEERLSIPPNEELRNEILSKAHDTPYTAYPES 185
            DE + +IR  I      ++RE+A   +  ++RL +P  + +R  IL +AH+T Y+ +P S
Sbjct: 1138 DEKISEIRRLILDGRGKDFREDAEGVVWFKDRLCVPNVQSIRELILKEAHETAYSIHPGS 1197


>gb|AAV31288.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1625

 Score = 44.7 bits (104), Expect(2) = 2e-08
 Identities = 19/60 (31%), Positives = 38/60 (63%)
 Frame = +3

Query: 6   DETLEKIRLNIRMREPGNYREEAVNAITVEERLSIPPNEELRNEILSKAHDTPYTAYPES 185
           D  +++I+ N+R  +   + E+    + + ER+ +P N++L++ IL +AHDT Y+ +P S
Sbjct: 385 DPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGS 444



 Score = 39.3 bits (90), Expect(2) = 2e-08
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +2

Query: 158 YTIHRLP*EYRMYQDLKKKFWRNGTKRDIASFVGRC 265
           Y+IH  P   +MYQDLK++FW    KR+IA +V  C
Sbjct: 438 YSIH--PGSIKMYQDLKERFWWASMKREIAEYVAVC 471


>gb|ABA98151.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1281

 Score = 45.1 bits (105), Expect(2) = 1e-07
 Identities = 19/60 (31%), Positives = 38/60 (63%)
 Frame = +3

Query: 6    DETLEKIRLNIRMREPGNYREEAVNAITVEERLSIPPNEELRNEILSKAHDTPYTAYPES 185
            D  +++I+ N+R  +   Y E+    + + ER+ +P N+EL++ I+ +AH+T Y+ +P S
Sbjct: 1007 DPDIQEIKKNMRRGKAIGYVEDEQGTVWLGERICVPDNKELKDTIMKEAHETLYSIHPGS 1066



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 158  YTIHRLP*EYRMYQDLKKKFWRNGTKRDIASFVGRC 265
            Y+IH  P   +MYQDLK++FW    +R+I  +V  C
Sbjct: 1060 YSIH--PGSIKMYQDLKQQFWWASMRREIEEYVALC 1093


>gb|AAT73648.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 997

 Score = 39.3 bits (90), Expect(2) = 8e-07
 Identities = 18/60 (30%), Positives = 36/60 (60%)
 Frame = +3

Query: 6   DETLEKIRLNIRMREPGNYREEAVNAITVEERLSIPPNEELRNEILSKAHDTPYTAYPES 185
           D  + +I+ N+R  +   + E+    + + ER+ +  N++L++ IL +AHDT Y+ +P S
Sbjct: 733 DPDILEIKKNMRRGKAIGFLEDEQGTVWLGERICVLDNKDLKDAILKEAHDTLYSIHPGS 792



 Score = 39.3 bits (90), Expect(2) = 8e-07
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +2

Query: 158 YTIHRLP*EYRMYQDLKKKFWRNGTKRDIASFVGRC 265
           Y+IH  P   +MYQDLK++FW    KR+IA +V  C
Sbjct: 786 YSIH--PGSIKMYQDLKERFWWASMKREIAEYVAVC 819


>gb|AAX95261.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|62733825|gb|AAX95934.1|
            retrotransposon protein, putative, Ty3-gypsy sub-class
            [Oryza sativa Japonica Group] gi|77550593|gb|ABA93390.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1398

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 19/61 (31%), Positives = 37/61 (60%)
 Frame = +3

Query: 6    DETLEKIRLNIRMREPGNYREEAVNAITVEERLSIPPNEELRNEILSKAHDTPYTAYPES 185
            D  + +I+ N+R  +   + E+    + + ER+ +P N++L++ IL +AHDT Y+ +  S
Sbjct: 924  DPDILEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHLGS 983

Query: 186  T 188
            T
Sbjct: 984  T 984



 Score = 35.8 bits (81), Expect(2) = 2e-06
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 188  RMYQDLKKKFWRNGTKRDIASFVGRC 265
            +MYQDLK++FW    KR+IA +V  C
Sbjct: 985  KMYQDLKERFWWASMKREIAEYVAVC 1010


>emb|CAN73773.1| hypothetical protein VITISV_007502 [Vitis vinifera]
          Length = 987

 Score = 42.0 bits (97), Expect(2) = 4e-06
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = +2

Query: 152 SRYTIHRLP*EYRMYQDLKKKFWRNGTKRDIASFV 256
           ++YTIH      +MYQDLK++FW +G KRDIA FV
Sbjct: 751 AKYTIHLG--NNKMYQDLKRQFWWHGMKRDIAQFV 783



 Score = 34.3 bits (77), Expect(2) = 4e-06
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 6   DETLEKIRLNIRMREPG-NYREEAVNAITVEERLSIPPNEELRNEILSKAHDTPYTAY 176
           DE LEK++  +   E   N+      ++  + RL +P + E+RNE+L  AH   YT +
Sbjct: 699 DEFLEKVKAQLVASEVDENWSMYEBGSVRFKWRLCVPKDVEMRNELLVDAHRAKYTIH 756