BLASTX nr result
ID: Mentha29_contig00045355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00045355
(317 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62632.1| hypothetical protein VITISV_031440 [Vitis vinifera] 54 4e-09
ref|XP_003627473.1| DNA-directed RNA polymerase III subunit RPC2... 55 2e-08
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s... 54 1e-07
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr... 54 1e-07
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s... 54 1e-07
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s... 54 1e-07
emb|CBI35070.3| unnamed protein product [Vitis vinifera] 54 1e-07
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob... 54 3e-07
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob... 54 3e-07
ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theob... 54 3e-07
ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theob... 54 3e-07
ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theob... 54 3e-07
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put... 54 2e-06
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s... 54 3e-06
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s... 54 3e-06
ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phas... 54 3e-06
ref|XP_006572931.1| PREDICTED: DNA-directed RNA polymerase III s... 54 3e-06
ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III s... 55 3e-06
ref|XP_006572932.1| PREDICTED: DNA-directed RNA polymerase III s... 54 3e-06
ref|XP_006572933.1| PREDICTED: DNA-directed RNA polymerase III s... 54 3e-06
>emb|CAN62632.1| hypothetical protein VITISV_031440 [Vitis vinifera]
Length = 496
Score = 53.9 bits (128), Expect(2) = 4e-09
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 204 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 234
Score = 32.3 bits (72), Expect(2) = 4e-09
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 143 APRMRTKLCRMDSLMYLLV 87
+P + TKLCRMDSL+YLLV
Sbjct: 187 SPCVPTKLCRMDSLLYLLV 205
>ref|XP_003627473.1| DNA-directed RNA polymerase III subunit RPC2 [Medicago truncatula]
gi|355521495|gb|AET01949.1| DNA-directed RNA polymerase
III subunit RPC2 [Medicago truncatula]
Length = 653
Score = 55.1 bits (131), Expect(2) = 2e-08
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT+SIELV YDKLGAGQNA+VA
Sbjct: 204 LVYPQRPLLTTKSIELVGYDKLGAGQNATVA 234
Score = 28.9 bits (63), Expect(2) = 2e-08
Identities = 25/77 (32%), Positives = 31/77 (40%)
Frame = -1
Query: 317 MGKQAMGSIAYNQDLSEKXXXXXXXXXXVPTWEQESTGSEIQHKSFNISKLV*KHGDEAP 138
MGKQAMG+IAYNQ GS I++
Sbjct: 167 MGKQAMGNIAYNQ----------------------GKGSNIEYG---------------- 188
Query: 137 RMRTKLCRMDSLMYLLV 87
R +L RMD+L+YLLV
Sbjct: 189 RKLEELRRMDTLLYLLV 205
>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
isoform X1 [Citrus sinensis]
gi|568883651|ref|XP_006494573.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC2-like isoform X2 [Citrus
sinensis]
Length = 1149
Score = 53.9 bits (128), Expect(2) = 1e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 720 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 750
Score = 27.3 bits (59), Expect(2) = 1e-07
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+LCRMDSL+YLLV
Sbjct: 709 QLCRMDSLLYLLV 721
>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
gi|557534507|gb|ESR45625.1| hypothetical protein
CICLE_v10000078mg [Citrus clementina]
Length = 1149
Score = 53.9 bits (128), Expect(2) = 1e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 720 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 750
Score = 27.3 bits (59), Expect(2) = 1e-07
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+LCRMDSL+YLLV
Sbjct: 709 QLCRMDSLLYLLV 721
>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
vinifera]
Length = 1142
Score = 53.9 bits (128), Expect(2) = 1e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 713 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 743
Score = 27.3 bits (59), Expect(2) = 1e-07
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+LCRMDSL+YLLV
Sbjct: 702 QLCRMDSLLYLLV 714
>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
isoform X3 [Citrus sinensis]
Length = 1058
Score = 53.9 bits (128), Expect(2) = 1e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 629 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 659
Score = 27.3 bits (59), Expect(2) = 1e-07
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+LCRMDSL+YLLV
Sbjct: 618 QLCRMDSLLYLLV 630
>emb|CBI35070.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 53.9 bits (128), Expect(2) = 1e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 32 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 62
Score = 27.3 bits (59), Expect(2) = 1e-07
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+LCRMDSL+YLLV
Sbjct: 21 QLCRMDSLLYLLV 33
>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 1158
Score = 53.9 bits (128), Expect(2) = 3e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 729 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 759
Score = 26.2 bits (56), Expect(2) = 3e-07
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+LCRMD+L+YLLV
Sbjct: 718 QLCRMDTLLYLLV 730
>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
isoform 3 [Theobroma cacao]
Length = 1153
Score = 53.9 bits (128), Expect(2) = 3e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 724 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 754
Score = 26.2 bits (56), Expect(2) = 3e-07
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+LCRMD+L+YLLV
Sbjct: 713 QLCRMDTLLYLLV 725
>ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao]
gi|508727715|gb|EOY19612.1| DNA-directed RNA polymerase
isoform 4 [Theobroma cacao]
Length = 1034
Score = 53.9 bits (128), Expect(2) = 3e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 729 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 759
Score = 26.2 bits (56), Expect(2) = 3e-07
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+LCRMD+L+YLLV
Sbjct: 718 QLCRMDTLLYLLV 730
>ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
gi|508727713|gb|EOY19610.1| DNA-directed RNA polymerase
isoform 2 [Theobroma cacao]
Length = 1011
Score = 53.9 bits (128), Expect(2) = 3e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 729 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 759
Score = 26.2 bits (56), Expect(2) = 3e-07
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+LCRMD+L+YLLV
Sbjct: 718 QLCRMDTLLYLLV 730
>ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theobroma cacao]
gi|508727716|gb|EOY19613.1| DNA-directed RNA polymerase
isoform 5 [Theobroma cacao]
Length = 1006
Score = 53.9 bits (128), Expect(2) = 3e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 724 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 754
Score = 26.2 bits (56), Expect(2) = 3e-07
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+LCRMD+L+YLLV
Sbjct: 713 QLCRMDTLLYLLV 725
>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
polymerase III subunit, putative [Ricinus communis]
Length = 1139
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 713 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 743
Score = 23.1 bits (48), Expect(2) = 2e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+L RMDSL+YLLV
Sbjct: 702 QLFRMDSLLYLLV 714
>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X1 [Glycine max]
Length = 1166
Score = 53.9 bits (128), Expect(2) = 3e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 738 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 768
Score = 22.7 bits (47), Expect(2) = 3e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+L RMDSL+YLLV
Sbjct: 727 QLRRMDSLLYLLV 739
>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X1 [Glycine max]
Length = 1165
Score = 53.9 bits (128), Expect(2) = 3e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 737 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 767
Score = 22.7 bits (47), Expect(2) = 3e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+L RMDSL+YLLV
Sbjct: 726 QLRRMDSLLYLLV 738
>ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
gi|561026273|gb|ESW24958.1| hypothetical protein
PHAVU_004G175000g [Phaseolus vulgaris]
Length = 1161
Score = 53.9 bits (128), Expect(2) = 3e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 733 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 763
Score = 22.7 bits (47), Expect(2) = 3e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+L RMDSL+YLLV
Sbjct: 722 QLRRMDSLLYLLV 734
>ref|XP_006572931.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X2 [Glycine max]
Length = 1158
Score = 53.9 bits (128), Expect(2) = 3e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 730 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 760
Score = 22.7 bits (47), Expect(2) = 3e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+L RMDSL+YLLV
Sbjct: 719 QLRRMDSLLYLLV 731
>ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cicer
arietinum]
Length = 1134
Score = 55.1 bits (131), Expect(2) = 3e-06
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT+SIELV YDKLGAGQNA+VA
Sbjct: 705 LVYPQRPLLTTKSIELVGYDKLGAGQNATVA 735
Score = 21.6 bits (44), Expect(2) = 3e-06
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+L RMD+L+YLLV
Sbjct: 694 QLRRMDTLLYLLV 706
>ref|XP_006572932.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X3 [Glycine max]
Length = 1085
Score = 53.9 bits (128), Expect(2) = 3e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 738 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 768
Score = 22.7 bits (47), Expect(2) = 3e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+L RMDSL+YLLV
Sbjct: 727 QLRRMDSLLYLLV 739
>ref|XP_006572933.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X4 [Glycine max]
Length = 1036
Score = 53.9 bits (128), Expect(2) = 3e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3
Query: 93 LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 608 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 638
Score = 22.7 bits (47), Expect(2) = 3e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 125 KLCRMDSLMYLLV 87
+L RMDSL+YLLV
Sbjct: 597 QLRRMDSLLYLLV 609