BLASTX nr result

ID: Mentha29_contig00045355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00045355
         (317 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62632.1| hypothetical protein VITISV_031440 [Vitis vinifera]    54   4e-09
ref|XP_003627473.1| DNA-directed RNA polymerase III subunit RPC2...    55   2e-08
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...    54   1e-07
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...    54   1e-07
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...    54   1e-07
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s...    54   1e-07
emb|CBI35070.3| unnamed protein product [Vitis vinifera]               54   1e-07
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...    54   3e-07
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...    54   3e-07
ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theob...    54   3e-07
ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theob...    54   3e-07
ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theob...    54   3e-07
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...    54   2e-06
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...    54   3e-06
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s...    54   3e-06
ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phas...    54   3e-06
ref|XP_006572931.1| PREDICTED: DNA-directed RNA polymerase III s...    54   3e-06
ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III s...    55   3e-06
ref|XP_006572932.1| PREDICTED: DNA-directed RNA polymerase III s...    54   3e-06
ref|XP_006572933.1| PREDICTED: DNA-directed RNA polymerase III s...    54   3e-06

>emb|CAN62632.1| hypothetical protein VITISV_031440 [Vitis vinifera]
          Length = 496

 Score = 53.9 bits (128), Expect(2) = 4e-09
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 204 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 234



 Score = 32.3 bits (72), Expect(2) = 4e-09
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = -1

Query: 143 APRMRTKLCRMDSLMYLLV 87
           +P + TKLCRMDSL+YLLV
Sbjct: 187 SPCVPTKLCRMDSLLYLLV 205


>ref|XP_003627473.1| DNA-directed RNA polymerase III subunit RPC2 [Medicago truncatula]
           gi|355521495|gb|AET01949.1| DNA-directed RNA polymerase
           III subunit RPC2 [Medicago truncatula]
          Length = 653

 Score = 55.1 bits (131), Expect(2) = 2e-08
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT+SIELV YDKLGAGQNA+VA
Sbjct: 204 LVYPQRPLLTTKSIELVGYDKLGAGQNATVA 234



 Score = 28.9 bits (63), Expect(2) = 2e-08
 Identities = 25/77 (32%), Positives = 31/77 (40%)
 Frame = -1

Query: 317 MGKQAMGSIAYNQDLSEKXXXXXXXXXXVPTWEQESTGSEIQHKSFNISKLV*KHGDEAP 138
           MGKQAMG+IAYNQ                        GS I++                 
Sbjct: 167 MGKQAMGNIAYNQ----------------------GKGSNIEYG---------------- 188

Query: 137 RMRTKLCRMDSLMYLLV 87
           R   +L RMD+L+YLLV
Sbjct: 189 RKLEELRRMDTLLYLLV 205


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           isoform X1 [Citrus sinensis]
           gi|568883651|ref|XP_006494573.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC2-like isoform X2 [Citrus
           sinensis]
          Length = 1149

 Score = 53.9 bits (128), Expect(2) = 1e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 720 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 750



 Score = 27.3 bits (59), Expect(2) = 1e-07
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +LCRMDSL+YLLV
Sbjct: 709 QLCRMDSLLYLLV 721


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
           gi|557534507|gb|ESR45625.1| hypothetical protein
           CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 53.9 bits (128), Expect(2) = 1e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 720 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 750



 Score = 27.3 bits (59), Expect(2) = 1e-07
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +LCRMDSL+YLLV
Sbjct: 709 QLCRMDSLLYLLV 721


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
           vinifera]
          Length = 1142

 Score = 53.9 bits (128), Expect(2) = 1e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 713 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 743



 Score = 27.3 bits (59), Expect(2) = 1e-07
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +LCRMDSL+YLLV
Sbjct: 702 QLCRMDSLLYLLV 714


>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           isoform X3 [Citrus sinensis]
          Length = 1058

 Score = 53.9 bits (128), Expect(2) = 1e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 629 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 659



 Score = 27.3 bits (59), Expect(2) = 1e-07
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +LCRMDSL+YLLV
Sbjct: 618 QLCRMDSLLYLLV 630


>emb|CBI35070.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score = 53.9 bits (128), Expect(2) = 1e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 32  LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 62



 Score = 27.3 bits (59), Expect(2) = 1e-07
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +LCRMDSL+YLLV
Sbjct: 21  QLCRMDSLLYLLV 33


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
           gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
           isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 53.9 bits (128), Expect(2) = 3e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 729 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 759



 Score = 26.2 bits (56), Expect(2) = 3e-07
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +LCRMD+L+YLLV
Sbjct: 718 QLCRMDTLLYLLV 730


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
           gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
           isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 53.9 bits (128), Expect(2) = 3e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 724 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 754



 Score = 26.2 bits (56), Expect(2) = 3e-07
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +LCRMD+L+YLLV
Sbjct: 713 QLCRMDTLLYLLV 725


>ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao]
           gi|508727715|gb|EOY19612.1| DNA-directed RNA polymerase
           isoform 4 [Theobroma cacao]
          Length = 1034

 Score = 53.9 bits (128), Expect(2) = 3e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 729 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 759



 Score = 26.2 bits (56), Expect(2) = 3e-07
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +LCRMD+L+YLLV
Sbjct: 718 QLCRMDTLLYLLV 730


>ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
           gi|508727713|gb|EOY19610.1| DNA-directed RNA polymerase
           isoform 2 [Theobroma cacao]
          Length = 1011

 Score = 53.9 bits (128), Expect(2) = 3e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 729 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 759



 Score = 26.2 bits (56), Expect(2) = 3e-07
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +LCRMD+L+YLLV
Sbjct: 718 QLCRMDTLLYLLV 730


>ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theobroma cacao]
           gi|508727716|gb|EOY19613.1| DNA-directed RNA polymerase
           isoform 5 [Theobroma cacao]
          Length = 1006

 Score = 53.9 bits (128), Expect(2) = 3e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 724 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 754



 Score = 26.2 bits (56), Expect(2) = 3e-07
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +LCRMD+L+YLLV
Sbjct: 713 QLCRMDTLLYLLV 725


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
           communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
           polymerase III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 53.9 bits (128), Expect(2) = 2e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 713 LVYPQRPLLTTRTIELVGYDKLGAGQNATVA 743



 Score = 23.1 bits (48), Expect(2) = 2e-06
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +L RMDSL+YLLV
Sbjct: 702 QLFRMDSLLYLLV 714


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
           isoform X1 [Glycine max]
          Length = 1166

 Score = 53.9 bits (128), Expect(2) = 3e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 738 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 768



 Score = 22.7 bits (47), Expect(2) = 3e-06
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +L RMDSL+YLLV
Sbjct: 727 QLRRMDSLLYLLV 739


>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
           isoform X1 [Glycine max]
          Length = 1165

 Score = 53.9 bits (128), Expect(2) = 3e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 737 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 767



 Score = 22.7 bits (47), Expect(2) = 3e-06
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +L RMDSL+YLLV
Sbjct: 726 QLRRMDSLLYLLV 738


>ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
           gi|561026273|gb|ESW24958.1| hypothetical protein
           PHAVU_004G175000g [Phaseolus vulgaris]
          Length = 1161

 Score = 53.9 bits (128), Expect(2) = 3e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 733 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 763



 Score = 22.7 bits (47), Expect(2) = 3e-06
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +L RMDSL+YLLV
Sbjct: 722 QLRRMDSLLYLLV 734


>ref|XP_006572931.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
           isoform X2 [Glycine max]
          Length = 1158

 Score = 53.9 bits (128), Expect(2) = 3e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 730 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 760



 Score = 22.7 bits (47), Expect(2) = 3e-06
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +L RMDSL+YLLV
Sbjct: 719 QLRRMDSLLYLLV 731


>ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cicer
           arietinum]
          Length = 1134

 Score = 55.1 bits (131), Expect(2) = 3e-06
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT+SIELV YDKLGAGQNA+VA
Sbjct: 705 LVYPQRPLLTTKSIELVGYDKLGAGQNATVA 735



 Score = 21.6 bits (44), Expect(2) = 3e-06
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +L RMD+L+YLLV
Sbjct: 694 QLRRMDTLLYLLV 706


>ref|XP_006572932.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
           isoform X3 [Glycine max]
          Length = 1085

 Score = 53.9 bits (128), Expect(2) = 3e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 738 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 768



 Score = 22.7 bits (47), Expect(2) = 3e-06
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +L RMDSL+YLLV
Sbjct: 727 QLRRMDSLLYLLV 739


>ref|XP_006572933.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
           isoform X4 [Glycine max]
          Length = 1036

 Score = 53.9 bits (128), Expect(2) = 3e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LSYPQRPLLTTQSIELVLYDKLGAGQNASVA 1
           L YPQRPLLTT++IELV YDKLGAGQNA+VA
Sbjct: 608 LVYPQRPLLTTKTIELVGYDKLGAGQNATVA 638



 Score = 22.7 bits (47), Expect(2) = 3e-06
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1

Query: 125 KLCRMDSLMYLLV 87
           +L RMDSL+YLLV
Sbjct: 597 QLRRMDSLLYLLV 609


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