BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00041231
         (550 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006297338.1| hypothetical protein CARUB_v10013358mg [Caps...    61   2e-07
ref|XP_006296053.1| hypothetical protein CARUB_v10025202mg, part...    61   2e-07
ref|XP_006293836.1| hypothetical protein CARUB_v10022820mg [Caps...    60   3e-07
emb|CCD74489.1| Zinc knuckle (CCHC-type) family protein / Plant ...    56   5e-06

>ref|XP_006297338.1| hypothetical protein CARUB_v10013358mg [Capsella rubella]
           gi|482566047|gb|EOA30236.1| hypothetical protein
           CARUB_v10013358mg [Capsella rubella]
          Length = 564

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
 Frame = -3

Query: 503 YDELLTKFKKQVRRNEVLTKENDELKTQLVRLEVMLTQKDSELGKQAIKLDLAEKIFHKL 324
           Y+ L  ++ K V  N +LTKE  +L+ ++V  E   ++K+ E  +  ++L   +K    L
Sbjct: 341 YEMLYEQWLKVVEENSILTKEKLKLEAKVVEAEKYASEKEEEASQAKVQLGETQKNLRML 400

Query: 323 NTGSSKLDQVLALPQIGSKVLGFVEMTKPVVSNVLSTNGKPFVRSKSDLQENELVK---- 156
           N G+ +LD++L + ++    LGF    K   S+ +   G+    +     +   V+    
Sbjct: 401 NNGTKQLDEILNVGKMDRYGLGF--KGKRSKSDSMFVYGRKVTSTSGTETKTAAVRKIAI 458

Query: 155 ---SSRRIFK--CHHCHRAGHIRSYSKEWMKEKQKRK 60
                +R+F+  C+HC   GHIR      M+E+ + K
Sbjct: 459 EIDEPQRMFRPTCYHCGVVGHIRPRCFRLMRERNQMK 495


>ref|XP_006296053.1| hypothetical protein CARUB_v10025202mg, partial [Capsella rubella]
           gi|482564761|gb|EOA28951.1| hypothetical protein
           CARUB_v10025202mg, partial [Capsella rubella]
          Length = 409

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
 Frame = -3

Query: 503 YDELLTKFKKQVRRNEVLTKENDELKTQLVRLEVMLTQKDSELGKQAIKLDLAEKIFHKL 324
           Y+ L   + K V  N VLTKE  +L+ ++V  E   ++K+ E  +  ++L+  +K    L
Sbjct: 133 YEMLYEHWLKVVEENSVLTKEKLKLEAKVVEAERYASEKEEEASQAKVQLEETQKNLRML 192

Query: 323 NTGSSKLDQVLALPQIGSKVLGFV---EMTKPV------VSNVLSTNGKPFVRSKS---- 183
           N G+ +LD++L + ++    LGF        PV      V++   T  +   +++S    
Sbjct: 193 NNGTKQLDEILNIGKMDRYGLGFTGKPSKEDPVFVYGGKVTSASGTVSETAAKTESASET 252

Query: 182 ------DLQENELVKSSRRIFK--CHHCHRAGHIRSYSKEWMKEKQKRK 60
                   +  +L     RIF+  C+HC   GHIR      M+EK + K
Sbjct: 253 AVVQDIGTKNFKLQSGPPRIFRPTCYHCGVVGHIRPRCFRLMREKNQMK 301


>ref|XP_006293836.1| hypothetical protein CARUB_v10022820mg [Capsella rubella]
           gi|482562544|gb|EOA26734.1| hypothetical protein
           CARUB_v10022820mg [Capsella rubella]
          Length = 527

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
 Frame = -3

Query: 503 YDELLTKFKKQVRRNEVLTKENDELKTQLVRLEVMLTQKDSELGKQAIKLDLAEKIFHKL 324
           Y+ L   + K V  N VLTKE  +L+ ++   E   ++K+ E  +  ++L   +K    L
Sbjct: 290 YEMLYEHWLKVVEENSVLTKEKLKLEAKVAEAEKYASEKEEEASQAKVQLGETQKNLRML 349

Query: 323 NTGSSKLDQVLALPQIGSKVLGF----------------VEMTKPVVSNVLS---TNGKP 201
           N G+ +LD++L + ++    LGF                V      VS   +   +  + 
Sbjct: 350 NNGTKQLDEILNIGKMDRYGLGFKGKPSKEDSVFVYGGKVTSASGTVSETAAKKESASET 409

Query: 200 FVRSKSDLQENELVKSSRRIFK--CHHCHRAGHIRSYSKEWMKEKQKRK 60
            V  K   + + L   ++RIF+  C+HC   GHIR     +++E+ + K
Sbjct: 410 AVVQKIGTKNSNLESEAQRIFRPTCYHCGVVGHIRPRCFRFLRERNQMK 458


>emb|CCD74489.1| Zinc knuckle (CCHC-type) family protein / Plant mobile domain
           protein family [Arabidopsis halleri subsp. halleri]
          Length = 700

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
 Frame = -3

Query: 503 YDELLTKFKKQVRRNEVLTKENDELKTQLVRLEVMLTQKDSELGKQAIKLDLAEKIFHKL 324
           Y  L   + K ++ N VLTKE  +L+ ++++ +    +K+ E  +  ++L   +K    L
Sbjct: 116 YKALYEHWLKIIKENSVLTKEKLKLEAKVIKAQKYEAEKEEEAAQAKVQLKKTQKNLRML 175

Query: 323 NTGSSKLDQVLALPQIGSKVLGF---VEMTKPV------VSNVLST----------NGKP 201
           N G+ KLD +L + +     LGF   +  + PV      V++   T          N K 
Sbjct: 176 NNGTKKLDHILNIGKTVKCGLGFEGKLSNSDPVFVYGGKVTSASGTDTETAIGTASNAKT 235

Query: 200 FVRSKSDLQEN-----ELVKSSRRIFK--CHHCHRAGHIR 102
              +++D + +     EL    +R F+  CHHC   GHIR
Sbjct: 236 AYDTRTDTESDTRKVQELQSPPQRAFRPVCHHCGVVGHIR 275