BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00040482
         (762 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007049557.1| Tetratricopeptide repeat-like superfamily pr...   270   5e-70
gb|EXB61171.1| hypothetical protein L484_007437 [Morus notabilis]     269   9e-70
ref|XP_002527276.1| pentatricopeptide repeat-containing protein,...   262   1e-67
ref|XP_006469338.1| PREDICTED: putative pentatricopeptide repeat...   261   1e-67
ref|XP_006447959.1| hypothetical protein CICLE_v10014595mg [Citr...   261   1e-67
ref|XP_004292328.1| PREDICTED: putative pentatricopeptide repeat...   257   4e-66
ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat...   254   2e-65
ref|XP_002303023.2| pentatricopeptide repeat-containing family p...   251   3e-64
ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat...   248   2e-63
ref|XP_004236339.1| PREDICTED: putative pentatricopeptide repeat...   247   3e-63
ref|XP_006282116.1| hypothetical protein CARUB_v10028364mg [Caps...   242   1e-61
ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arab...   236   8e-60
ref|NP_200728.2| protein ORGANELLE TRANSCRIPT PROCESSING 80 [Ara...   235   1e-59
ref|XP_006401000.1| hypothetical protein EUTSA_v10015737mg [Eutr...   232   9e-59
ref|XP_007151895.1| hypothetical protein PHAVU_004G084900g [Phas...   231   2e-58
emb|CBI18728.3| unnamed protein product [Vitis vinifera]              222   1e-55
ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat...   219   1e-54
emb|CBI38389.3| unnamed protein product [Vitis vinifera]              216   7e-54
ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfami...   154   3e-35
ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containi...   147   3e-33

>ref|XP_007049557.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
           gi|508701818|gb|EOX93714.1| Tetratricopeptide
           repeat-like superfamily protein [Theobroma cacao]
          Length = 632

 Score =  270 bits (689), Expect = 5e-70
 Identities = 131/224 (58%), Positives = 161/224 (71%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           RK+ ISLL+NC+ ++Q  PIH  I++   + D F+VFELLR  S F++I+YA K+F +T 
Sbjct: 29  RKEFISLLKNCKRINQTLPIHAKIIRTGHDQDPFIVFELLRLSSTFHSINYASKIFQQTH 88

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNV+LYTALIDG V  G Y D I  Y QMI   + PD +VI SVLKAC     L  GK+
Sbjct: 89  NPNVFLYTALIDGFVLAGSYSDGISLYVQMINRFIVPDKYVITSVLKACGSHFALREGKE 148

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
            H   LKLGL SNR + +KL+E YGKCGEF+D +KV DEM +RDVVA T+MI  YL+H L
Sbjct: 149 FHCQALKLGLSSNRSITMKLLEFYGKCGEFDDARKVFDEMVERDVVASTIMINCYLDHGL 208

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQK 761
           VE+   VFD V +KDTVCWTAMIDGLVRN EM++ALE FR MQK
Sbjct: 209 VEQAIEVFDRVRIKDTVCWTAMIDGLVRNGEMNRALEMFREMQK 252



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
 Frame = +3

Query: 234 IDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKA 413
           ++ AI+VF R R  +   +TA+IDGLV  G    A+  + +M   +V P+   I  VL A
Sbjct: 209 VEQAIEVFDRVRIKDTVCWTAMIDGLVRNGEMNRALEMFREMQKENVRPNEITIVCVLSA 268

Query: 414 CLLELDLGTGKQIHGH-GLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVA 590
           C     L  G+ +H + G + G+  +  V   L+ +Y +CG+ ++ ++V   M +R+V+ 
Sbjct: 269 CSHLGALELGRWVHSYMGKEHGIVLSHFVGGALINMYSRCGDIDEAERVFAMMKERNVIT 328

Query: 591 MTVMIASYLEH 623
             +MI+    H
Sbjct: 329 YNLMISGLAMH 339


>gb|EXB61171.1| hypothetical protein L484_007437 [Morus notabilis]
          Length = 631

 Score =  269 bits (687), Expect = 9e-70
 Identities = 131/223 (58%), Positives = 160/223 (71%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           RK+ I LLQ C+++  +   H  I++N QE D F+VFELLR CS  N+IDYA K+F R +
Sbjct: 28  RKEVIFLLQKCKHISHVQSTHAKIIRNGQEQDPFIVFELLRLCSNLNSIDYASKIFQRIQ 87

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNV+LYTALIDG V  G Y+DAI  Y +MI +S+ PDN+ + S LKAC  +L L  G++
Sbjct: 88  TPNVFLYTALIDGFVLHGSYFDAILLYCRMIDDSIVPDNYAVVSALKACGFQLALKLGRE 147

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           IHG  +KLGLCSNR VK+KLMELYGKCGE ED ++V DEM +RD VA TVM+ SYL H  
Sbjct: 148 IHGQVMKLGLCSNRSVKMKLMELYGKCGELEDARRVFDEMPERDFVASTVMMTSYLHHGF 207

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
           V     VF  V  KDTVCWTAMIDGLV+N EM+ ALE FR MQ
Sbjct: 208 VREASAVFKQVRRKDTVCWTAMIDGLVKNGEMNWALEVFREMQ 250



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 48/178 (26%), Positives = 81/178 (45%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           + K + L   C  L+    +   +     E D      ++ +      +  A  VF + R
Sbjct: 164 KMKLMELYGKCGELEDARRVFDEM----PERDFVASTVMMTSYLHHGFVREASAVFKQVR 219

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
           + +   +TA+IDGLV  G    A+  + +M + +V P+   I  VL AC     L  G+ 
Sbjct: 220 RKDTVCWTAMIDGLVKNGEMNWALEVFREMQMENVKPNEATIVCVLSACSHLGALELGRW 279

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEH 623
           +H +  K  +  N  V   L+ +Y +CG+ + +KKV DEM +RD+     +IA    H
Sbjct: 280 VHSYMGKYEIKLNHIVGGALINMYARCGDIDKVKKVFDEMNERDISTYNSIIAGLGMH 337


>ref|XP_002527276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533369|gb|EEF35120.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  262 bits (669), Expect = 1e-67
 Identities = 128/224 (57%), Positives = 165/224 (73%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           RK+ ISLLQ+CR+ +QI PIH  I++N+  +D FVVFELLR CS  ++I+YA K+F+ T 
Sbjct: 137 RKQLISLLQSCRHSNQITPIHAKIIRNNYHNDAFVVFELLRVCSNLSSINYASKIFSFTE 196

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTALIDG V  G +   I  Y+QMI  S+ PDN+VI SVL+AC  +L L  G Q
Sbjct: 197 NPNVYLYTALIDGFVLSGSFISGIHLYYQMINLSIVPDNYVITSVLEACGFQLALKQGIQ 256

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           +H   LKLGL S R ++LKLM+ YGKCG  +D +++ DEM +RDVVA T+MI SY EH L
Sbjct: 257 VHCQVLKLGLSSKRLMRLKLMKFYGKCGSLKDAERLFDEMPERDVVASTIMINSYFEHGL 316

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQK 761
           ++    VF+L + KDTVCWTA+IDGLVRN EM++ALE FR MQ+
Sbjct: 317 IQEAIRVFNLTKSKDTVCWTAVIDGLVRNGEMNRALEVFREMQR 360



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 42/130 (32%), Positives = 67/130 (51%)
 Frame = +3

Query: 234 IDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKA 413
           I  AI+VF  T+  +   +TA+IDGLV  G    A+  + +M    V P+   I  VL A
Sbjct: 317 IQEAIRVFNLTKSKDTVCWTAVIDGLVRNGEMNRALEVFREMQREDVRPNEVTIVCVLSA 376

Query: 414 CLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAM 593
           C     L  G+ +H +  K G+  N  V   L+ +Y +CG+ ++  +V +EM +R+V+  
Sbjct: 377 CSQLGTLELGRWVHSYMGKYGIGINHFVGGALINMYSRCGDIDEAWRVFEEMKERNVITY 436

Query: 594 TVMIASYLEH 623
             MI  +  H
Sbjct: 437 NSMIVGFSLH 446


>ref|XP_006469338.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Citrus sinensis]
          Length = 631

 Score =  261 bits (668), Expect = 1e-67
 Identities = 129/225 (57%), Positives = 165/225 (73%), Gaps = 1/225 (0%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           R + ISLLQ C++++QI  IH  IV+N  + D F++FE+LR  S F +++YA K+F RT 
Sbjct: 28  RNQTISLLQKCKHINQIRSIHAKIVRNGHDQDPFILFEVLRISSNFKSLNYASKIFERTH 87

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNV+LYTA+IDG V+ G Y DAI  Y+QM+  SV PDN+ ++S LKAC   L L  G++
Sbjct: 88  HPNVFLYTAIIDGFVSNGSYADAIRLYYQMVEESVLPDNYAVSSALKACGFLLGLREGRE 147

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTD-RDVVAMTVMIASYLEHK 626
           IHG  LKLGL SNR  +LKL+ELYGKCGEF+D  ++ DEM +  DVVA TVMI  Y+EH 
Sbjct: 148 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 207

Query: 627 LVERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQK 761
           LVE    VF  V+VKDTVCWTAMIDGLVRN EM++AL+ FR MQ+
Sbjct: 208 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 252



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 41/130 (31%), Positives = 67/130 (51%)
 Frame = +3

Query: 234 IDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKA 413
           ++ A +VF+R +  +   +TA+IDGLV  G    A+  + +M  ++V P+   I  VL A
Sbjct: 209 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 268

Query: 414 CLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAM 593
           C     L  G+ IH +  K  +  N  V   L+ +Y +CG+ +   +V +EM +RDV   
Sbjct: 269 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 328

Query: 594 TVMIASYLEH 623
             +IA    H
Sbjct: 329 NSLIAGLAMH 338


>ref|XP_006447959.1| hypothetical protein CICLE_v10014595mg [Citrus clementina]
           gi|557550570|gb|ESR61199.1| hypothetical protein
           CICLE_v10014595mg [Citrus clementina]
          Length = 631

 Score =  261 bits (668), Expect = 1e-67
 Identities = 129/225 (57%), Positives = 165/225 (73%), Gaps = 1/225 (0%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           R + ISLLQ C++++QI  IH  IV+N  + D F++FE+LR  S F +++YA K+F RT 
Sbjct: 28  RNQTISLLQKCKHINQIRSIHAKIVRNGHDQDPFILFEVLRISSNFKSLNYASKIFERTH 87

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNV+LYTA+IDG V+ G Y DAI  Y+QM+  SV PDN+ ++S LKAC   L L  G++
Sbjct: 88  HPNVFLYTAIIDGFVSNGSYADAIRLYYQMVEESVLPDNYAVSSALKACGFLLGLREGRE 147

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTD-RDVVAMTVMIASYLEHK 626
           IHG  LKLGL SNR  +LKL+ELYGKCGEF+D  ++ DEM +  DVVA TVMI  Y+EH 
Sbjct: 148 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 207

Query: 627 LVERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQK 761
           LVE    VF  V+VKDTVCWTAMIDGLVRN EM++AL+ FR MQ+
Sbjct: 208 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 252



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 41/130 (31%), Positives = 67/130 (51%)
 Frame = +3

Query: 234 IDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKA 413
           ++ A +VF+R +  +   +TA+IDGLV  G    A+  + +M  ++V P+   I  VL A
Sbjct: 209 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 268

Query: 414 CLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAM 593
           C     L  G+ IH +  K  +  N  V   L+ +Y +CG+ +   +V +EM +RDV   
Sbjct: 269 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALRVFEEMKERDVTTY 328

Query: 594 TVMIASYLEH 623
             +IA    H
Sbjct: 329 NSLIAGLAMH 338


>ref|XP_004292328.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Fragaria vesca subsp.
           vesca]
          Length = 625

 Score =  257 bits (656), Expect = 4e-66
 Identities = 130/224 (58%), Positives = 160/224 (71%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           RK+ ISLLQ C++  QI  IH  I++N Q+ D F+VF+LLR C     IDYA KVF RT+
Sbjct: 28  RKELISLLQKCKHY-QIPQIHAKIIRNGQDQDPFIVFDLLRLCP----IDYASKVFRRTQ 82

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTALIDG V+ G Y DAI  YF+M+   +FPD +VI SVLKAC   L +   +Q
Sbjct: 83  SPNVYLYTALIDGFVSSGHYMDAIRLYFEMVNEYIFPDKYVITSVLKACGFGLAVEESRQ 142

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           +H   LKL L SNR ++LKLM +YGKCGEFE  ++V DEM++ D VA TVMI SY +H L
Sbjct: 143 VHAQALKLELSSNRSIRLKLMGVYGKCGEFESARQVFDEMSENDAVAATVMITSYADHGL 202

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQK 761
           VE    VFD +  KDTVCWTAMIDGLV+N EM++ALE FR MQ+
Sbjct: 203 VEEASGVFDRLRKKDTVCWTAMIDGLVKNGEMNRALEVFREMQR 246


>ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  254 bits (649), Expect = 2e-65
 Identities = 124/223 (55%), Positives = 166/223 (74%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           +K+ ISLLQ  ++++Q+ PIH  +++N    D F+VFELLR+CS+ +AIDYA ++F  T 
Sbjct: 49  QKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTH 108

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTALIDG V+ G Y+DAI  Y +M+ +S+ PDN+++ S+LKAC  +L L  G++
Sbjct: 109 NPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGRE 168

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           +H   LKLGL SNR V+L++MELYGKCGE  D ++V +EM + DVVA TVMI+SY +  L
Sbjct: 169 VHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGL 227

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
           VE    VF  V  KDTVCWTAMIDG VRN+EM++ALE FR MQ
Sbjct: 228 VEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQ 270



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 41/125 (32%), Positives = 64/125 (51%)
 Frame = +3

Query: 234 IDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKA 413
           ++ A  VF+R R+ +   +TA+IDG V       A+  +  M   +V P+ F I  VL A
Sbjct: 228 VEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSA 287

Query: 414 CLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAM 593
           C     L  G+ +H +  K  +  N  V   L+ +Y +CG  ++ + V DEM DRDV+  
Sbjct: 288 CSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITY 347

Query: 594 TVMIA 608
             MI+
Sbjct: 348 NTMIS 352


>ref|XP_002303023.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550345712|gb|EEE82296.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 621

 Score =  251 bits (640), Expect = 3e-64
 Identities = 125/224 (55%), Positives = 156/224 (69%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           R+  ISLLQNC++  +I PIH  I++N    D FVVFELLR CS  N+I YA K+F+ T+
Sbjct: 32  RRHFISLLQNCKHNSEIPPIHAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQ 91

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTALIDGLV    Y D I  Y+QMI +S+ PD++ + SVLKAC   L L  G++
Sbjct: 92  NPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGRE 151

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           +H   LKLGL SNR +++KL+ELYGKCG FED ++V DEM +RDVVA TVMI  Y +H  
Sbjct: 152 VHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDH-- 209

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQK 761
                       +KDTVCWTAMIDGLVRN E ++ALE FR MQ+
Sbjct: 210 -----------GIKDTVCWTAMIDGLVRNGESNRALEVFRNMQR 242


>ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  248 bits (633), Expect = 2e-63
 Identities = 122/223 (54%), Positives = 162/223 (72%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           +K+ ISLLQ  R+++Q+ PIH  +++N    D F+VFELLR+CS+ +AIDYA ++F  T 
Sbjct: 49  QKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTH 108

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTALIDG V+ G Y +AI  Y +M+  S+ PDN+++ S+LKAC  +L L  G++
Sbjct: 109 NPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGRE 168

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           +H   LKLG  SNR V+L++MELYGKCGE  D ++V +EM + DVVA TVMI+SY +  L
Sbjct: 169 VHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGL 227

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
           VE    VF  V  KDTVCWTAMIDG VRN+E ++ALE FR MQ
Sbjct: 228 VEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQ 270



 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 41/125 (32%), Positives = 64/125 (51%)
 Frame = +3

Query: 234 IDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKA 413
           ++ A  VF+R R+ +   +TA+IDG V       A+  +  M   +V P+ F I  VL A
Sbjct: 228 VEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSA 287

Query: 414 CLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAM 593
           C     L  G+ +H +  K  +  N  V   L+ +Y +CG  ++ + V DEM DRDV+  
Sbjct: 288 CSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITY 347

Query: 594 TVMIA 608
             MI+
Sbjct: 348 NTMIS 352


>ref|XP_004236339.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Solanum lycopersicum]
          Length = 630

 Score =  247 bits (631), Expect = 3e-63
 Identities = 124/223 (55%), Positives = 158/223 (70%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           RK+ +  LQ C+++   APIH +I+KN   +D F++FELLR CSR  +I+YA K+F +  
Sbjct: 28  RKQLLFKLQKCKSIQHAAPIHAHIIKNGNPNDPFILFELLRICSRCCSIEYASKIFRQIP 87

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNV++YTA I+ LV+ G Y D I  YFQMI + + PD ++I  VLKAC   LDL +G+Q
Sbjct: 88  DPNVFIYTAFIEVLVSSGAYSDGIRTYFQMIKDFILPDIYIIPLVLKACGCGLDLKSGQQ 147

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           IH   +KLGL  +R V++KLMELYGKCGEF D KKV DEM  RDVVA TVMI+ YL+H L
Sbjct: 148 IHCQVMKLGLSLDRFVRVKLMELYGKCGEFNDAKKVFDEMPQRDVVASTVMISCYLDHGL 207

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
           V +    F +V  KD VCWTAMIDGLV+N EM+ ALE FR MQ
Sbjct: 208 VSKAMDEFRVVSTKDNVCWTAMIDGLVKNGEMNYALELFREMQ 250



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 32/195 (16%)
 Frame = +3

Query: 147 IHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTRQPNV---------YL---- 287
           IH  ++K     D FV  +L+    +    + A KVF    Q +V         YL    
Sbjct: 148 IHCQVMKLGLSLDRFVRVKLMELYGKCGEFNDAKKVFDEMPQRDVVASTVMISCYLDHGL 207

Query: 288 ------------------YTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKA 413
                             +TA+IDGLV  G    A+  + +M +  + P+   I  VL A
Sbjct: 208 VSKAMDEFRVVSTKDNVCWTAMIDGLVKNGEMNYALELFREMQMAGLKPNEVTIVCVLSA 267

Query: 414 CLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAM 593
           C     L  GK +H +  K  +  N  V   L+ +Y +CG+ ++   + +E+  RDV   
Sbjct: 268 CAQLGALELGKWVHSYVEKYNIEVNHIVGSALVNMYSRCGDIDEAASLFEELKARDVTTY 327

Query: 594 TVMIASY-LEHKLVE 635
             MI  Y L  K +E
Sbjct: 328 NSMIVGYALNGKSIE 342


>ref|XP_006282116.1| hypothetical protein CARUB_v10028364mg [Capsella rubella]
           gi|482550820|gb|EOA15014.1| hypothetical protein
           CARUB_v10028364mg [Capsella rubella]
          Length = 550

 Score =  242 bits (617), Expect = 1e-61
 Identities = 126/223 (56%), Positives = 151/223 (67%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           RK  ISLL+NC+N+ Q+  IH  I++   + D FVVFEL+R CS  +++DYA  VF    
Sbjct: 29  RKALISLLRNCKNITQVPCIHARIIRTFHDQDAFVVFELIRVCSALDSVDYACDVFRYVS 88

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTA+IDG V+ G   D +  Y +MI +SV PDN+VI SVLKAC    DL   K+
Sbjct: 89  NPNVYLYTAMIDGFVSSGRSADGVSLYRKMIHSSVLPDNYVITSVLKAC----DLEDCKE 144

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           IH   LKLG  S R V LKLME+YGK GE  D KKV DEM +RD VA TVMI  Y E   
Sbjct: 145 IHAQVLKLGFGSGRSVGLKLMEIYGKSGELADAKKVFDEMPERDQVAATVMINCYSERGC 204

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
           +E    +F  V++KDTVCWTAMIDGLVRN EM+KALE FR MQ
Sbjct: 205 IEEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQ 247



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 39/149 (26%), Positives = 68/149 (45%)
 Frame = +3

Query: 177 EHDHFVVFELLRACSRFNAIDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQ 356
           E D      ++   S    I+ A+++F   +  +   +TA+IDGLV       A+  + +
Sbjct: 186 ERDQVAATVMINCYSERGCIEEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFRE 245

Query: 357 MIVNSVFPDNFVINSVLKACLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGE 536
           M +  V P+ F    VL AC     L  G+ +H       +  +  V   L+ +Y +CG+
Sbjct: 246 MQIEGVSPNEFTAVCVLSACSDLGALELGRWVHSFVENRKMDLSNYVGNALINMYCRCGD 305

Query: 537 FEDMKKVLDEMTDRDVVAMTVMIASYLEH 623
             + K+V   M D+DV++   MI+    H
Sbjct: 306 INEAKRVFRGMRDKDVISYNTMISGLAMH 334


>ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
           lyrata] gi|297310446|gb|EFH40870.1| hypothetical protein
           ARALYDRAFT_496037 [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score =  236 bits (601), Expect = 8e-60
 Identities = 124/223 (55%), Positives = 150/223 (67%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           RK  ISLL+NC+N  Q+  IH  I++   + D FVVFEL+R CS  ++IDYA  VF    
Sbjct: 29  RKTLISLLRNCKNNAQVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSIDYAYDVFRYVS 88

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTA+IDG V+ G   D +  Y +MI +SV PDN+VI SVLKAC L+      ++
Sbjct: 89  NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHSSVLPDNYVITSVLKACGLD----ECRE 144

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           IH   LKLG  S+R V LKLME+YGK GE  D KKV DEM DRD V  TVMI  Y E   
Sbjct: 145 IHSQVLKLGFGSSRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQVVATVMINCYSECGC 204

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
           ++    +F  V++KDTVCWTAMIDGLVRN EM+KALE FR MQ
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQ 247


>ref|NP_200728.2| protein ORGANELLE TRANSCRIPT PROCESSING 80 [Arabidopsis thaliana]
           gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g59200, chloroplastic; Flags: Precursor
           gi|9759241|dbj|BAB09765.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009773|gb|AED97156.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 544

 Score =  235 bits (600), Expect = 1e-59
 Identities = 120/223 (53%), Positives = 152/223 (68%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           RK  IS+L++C+N+  +  IH  I++   + D FVVFEL+R CS  +++DYA  VF+   
Sbjct: 29  RKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS 88

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTA+IDG V+ G   D +  Y +MI NSV PDN+VI SVLKAC    DL   ++
Sbjct: 89  NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCRE 144

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           IH   LKLG  S+R V LK+ME+YGK GE  + KK+ DEM DRD VA TVMI  Y E   
Sbjct: 145 IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 204

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
           ++    +F  V++KDTVCWTAMIDGLVRN EM+KALE FR MQ
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQ 247



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 42/168 (25%), Positives = 76/168 (45%)
 Frame = +3

Query: 177 EHDHFVVFELLRACSRFNAIDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQ 356
           + DH     ++   S    I  A+++F   +  +   +TA+IDGLV       A+  + +
Sbjct: 186 DRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFRE 245

Query: 357 MIVNSVFPDNFVINSVLKACLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGE 536
           M + +V  + F    VL AC     L  G+ +H       +  +  V   L+ +Y +CG+
Sbjct: 246 MQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGD 305

Query: 537 FEDMKKVLDEMTDRDVVAMTVMIASYLEHKLVERGCTVFDLVEVKDTV 680
             + ++V   M D+DV++   MI+    H     G +V  + E +D V
Sbjct: 306 INEARRVFRVMRDKDVISYNTMISGLAMH-----GASVEAINEFRDMV 348


>ref|XP_006401000.1| hypothetical protein EUTSA_v10015737mg [Eutrema salsugineum]
           gi|557102090|gb|ESQ42453.1| hypothetical protein
           EUTSA_v10015737mg [Eutrema salsugineum]
          Length = 533

 Score =  232 bits (592), Expect = 9e-59
 Identities = 121/223 (54%), Positives = 150/223 (67%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           RK  ISLL+NC N+ Q+  IH  I+++    D FVVFEL+R CS  +++DYA  VF    
Sbjct: 28  RKTFISLLRNCENISQVPSIHAKIIRSFHGQDAFVVFELIRICSTLDSVDYAYDVFRYVS 87

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTA+IDG V+ G   D    Y +MI +SV PDN+ I SVLKAC    DL   ++
Sbjct: 88  NPNVYLYTAMIDGFVSSGRSADGASLYRRMIHDSVLPDNYAITSVLKAC----DLEQCRE 143

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           IH   LKLG  S+R V LKLME+YGK G+  D KK+ DEM  RD VA TVMI  Y E+  
Sbjct: 144 IHSQVLKLGFGSSRSVGLKLMEIYGKSGDLVDAKKMFDEMPKRDHVAATVMINCYSEYGY 203

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
           ++    +F  V++KDT+CWTAMIDGLVRN EM+KALE FRRMQ
Sbjct: 204 IKEALELFRDVKIKDTICWTAMIDGLVRNREMNKALELFRRMQ 246



 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 39/149 (26%), Positives = 69/149 (46%)
 Frame = +3

Query: 177 EHDHFVVFELLRACSRFNAIDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQ 356
           + DH     ++   S +  I  A+++F   +  +   +TA+IDGLV       A+  + +
Sbjct: 185 KRDHVAATVMINCYSEYGYIKEALELFRDVKIKDTICWTAMIDGLVRNREMNKALELFRR 244

Query: 357 MIVNSVFPDNFVINSVLKACLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGE 536
           M    V P+ F    VL AC     L  G+ +H +     +  +  V   L+ +Y +CG+
Sbjct: 245 MQTEKVSPNEFTAVCVLSACSDLGALELGRWVHSYVENEKMELSSFVGNALINMYSRCGD 304

Query: 537 FEDMKKVLDEMTDRDVVAMTVMIASYLEH 623
             + K+V   M D+DV++   MI+    H
Sbjct: 305 INEAKRVFRGMQDKDVISYNTMISGLAMH 333


>ref|XP_007151895.1| hypothetical protein PHAVU_004G084900g [Phaseolus vulgaris]
           gi|561025204|gb|ESW23889.1| hypothetical protein
           PHAVU_004G084900g [Phaseolus vulgaris]
          Length = 632

 Score =  231 bits (589), Expect = 2e-58
 Identities = 115/223 (51%), Positives = 149/223 (66%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           RK  ISLL+N RN   + PIH + +K     D FV FELLR   + N+ID+A K+F  T+
Sbjct: 30  RKNVISLLKNLRNPQHVQPIHGHAIKTGTSQDPFVAFELLRQYCKLNSIDHATKLFHCTQ 89

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PN+YLYT+LIDG V+ G Y DAI  + QM+   V  D++ + +VLKAC+L+  LG G++
Sbjct: 90  NPNMYLYTSLIDGFVSFGFYTDAINLFGQMVRGHVLADSYAVTAVLKACVLQRALGRGRE 149

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           +HG   K GLC +R + LKL ELYGKCG  ED  KV DEM +RDVVA TVM+ S  +  +
Sbjct: 150 VHGLVFKRGLCLDRSIALKLAELYGKCGVLEDAWKVFDEMPERDVVACTVMMGSCFDWGM 209

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
           VE    VF+ +  +DTVCWT MIDGLVRN E ++ LE FR MQ
Sbjct: 210 VEEAVGVFNEMRSRDTVCWTLMIDGLVRNGEFNRGLEMFREMQ 252



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 48/193 (24%), Positives = 81/193 (41%)
 Frame = +3

Query: 177 EHDHFVVFELLRACSRFNAIDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQ 356
           E D      ++ +C  +  ++ A+ VF   R  +   +T +IDGLV  G +   +  + +
Sbjct: 191 ERDVVACTVMMGSCFDWGMVEEAVGVFNEMRSRDTVCWTLMIDGLVRNGEFNRGLEMFRE 250

Query: 357 MIVNSVFPDNFVINSVLKACLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGE 536
           M V  V P+      VL AC     L  G+ IH +  K  +  N  V   L+ +Y +CG+
Sbjct: 251 MQVKGVRPNEVTFVCVLSACSQLGALELGRWIHAYLCKCDVEVNWFVAGALINMYSRCGD 310

Query: 537 FEDMKKVLDEMTDRDVVAMTVMIASYLEHKLVERGCTVFDLVEVKDTVCWTAMIDGLVRN 716
            ++ + + DE                               V+VKD   + +MI GL  +
Sbjct: 311 IDEAQVLFDE-------------------------------VKVKDVSTYNSMIRGLAMH 339

Query: 717 DEMSKALEYFRRM 755
            +  +A+E FR M
Sbjct: 340 GKSMEAVELFREM 352


>emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  222 bits (566), Expect = 1e-55
 Identities = 112/223 (50%), Positives = 152/223 (68%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           +K+ ISLLQ  ++++Q+ PIH  +++N    D F+VFELLR+CS+ +AIDYA ++F  T 
Sbjct: 32  QKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTH 91

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTALIDG V+ G Y+DAI  Y +M+ +S+ PDN+++ S+LKAC  +L L  G++
Sbjct: 92  NPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGRE 151

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           +H   LKLGL SNR V+L++MELYGKCGE  D ++V +EM + DVVA             
Sbjct: 152 VHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVA------------- 197

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
                        KDTVCWTAMIDG VRN+EM++ALE FR MQ
Sbjct: 198 -------------KDTVCWTAMIDGFVRNEEMNRALEAFRGMQ 227



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 7/175 (4%)
 Frame = +3

Query: 105 SLLQNCRN---LDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTRQP 275
           S+L+ C +   L +   +H+  +K     +  V   ++    +   +  A +VF    + 
Sbjct: 135 SILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPED 194

Query: 276 NV----YLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTG 443
            V      +TA+IDG V       A+  +  M   +V P+ F I  VL AC     L  G
Sbjct: 195 VVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG 254

Query: 444 KQIHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIA 608
           + +H +  K  +  N  V   L+ +Y +CG  ++ + V DEM DRDV+    MI+
Sbjct: 255 RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS 309


>ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Glycine max]
          Length = 629

 Score =  219 bits (557), Expect = 1e-54
 Identities = 113/224 (50%), Positives = 150/224 (66%), Gaps = 1/224 (0%)
 Frame = +3

Query: 90  RKKAISLL-QNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRT 266
           R+  ISLL +N +N   +  IH + +K     D FV FELLR   + N ID+AIK+F  T
Sbjct: 26  RRVIISLLHKNRKNPKHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCT 85

Query: 267 RQPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGK 446
           + PNVYLYT+LIDG V+ G Y DAI  + QM+   V  DN+ + ++LKAC+L+  LG+GK
Sbjct: 86  QNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGK 145

Query: 447 QIHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHK 626
           ++HG  LK GL  +R + LKL+ELYGKCG  ED +K+ D M +RDVVA TVMI S  +  
Sbjct: 146 EVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCG 205

Query: 627 LVERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
           +VE    VF+ +  +DTVCWT +IDGLVRN E ++ LE FR MQ
Sbjct: 206 MVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQ 249



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 50/195 (25%), Positives = 81/195 (41%)
 Frame = +3

Query: 177 EHDHFVVFELLRACSRFNAIDYAIKVFTRTRQPNVYLYTALIDGLVACGLYYDAIGFYFQ 356
           E D      ++ +C     ++ AI+VF      +   +T +IDGLV  G +   +  + +
Sbjct: 188 ERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFRE 247

Query: 357 MIVNSVFPDNFVINSVLKACLLELDLGTGKQIHGHGLKLGLCSNRQVKLKLMELYGKCGE 536
           M V  V P+      VL AC     L  G+ IH +  K G+  NR V   L+ +Y +CG+
Sbjct: 248 MQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGD 307

Query: 537 FEDMKKVLDEMTDRDVVAMTVMIASYLEHKLVERGCTVFDLVEVKDTVCWTAMIDGLVRN 716
            ++ +                                +FD V VKD   + +MI GL  +
Sbjct: 308 IDEAQ-------------------------------ALFDGVRVKDVSTYNSMIGGLALH 336

Query: 717 DEMSKALEYFRRMQK 761
            +  +A+E F  M K
Sbjct: 337 GKSIEAVELFSEMLK 351


>emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  216 bits (550), Expect = 7e-54
 Identities = 110/223 (49%), Positives = 148/223 (66%)
 Frame = +3

Query: 90  RKKAISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTR 269
           +K+ ISLLQ  R+++Q+ PIH  +++N    D F+VFELLR+CS+ +AIDYA ++F  T 
Sbjct: 39  QKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTH 98

Query: 270 QPNVYLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQ 449
            PNVYLYTALIDG V+ G Y +AI  Y +M+  S+ PDN+++ S+LKAC  +L L  G++
Sbjct: 99  NPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGRE 158

Query: 450 IHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKL 629
           +H   LKLG  SNR V+L++MELYGKCGE  D ++V +EM + DVVA             
Sbjct: 159 VHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVA------------- 204

Query: 630 VERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
                        KDTVCWTAMIDG VRN+E ++ALE FR MQ
Sbjct: 205 -------------KDTVCWTAMIDGFVRNEETNRALEAFRGMQ 234



 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 7/175 (4%)
 Frame = +3

Query: 105 SLLQNCRN---LDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTRQP 275
           S+L+ C +   L +   +H+  +K     +  V   ++    +   +  A +VF    + 
Sbjct: 142 SILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPED 201

Query: 276 NV----YLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTG 443
            V      +TA+IDG V       A+  +  M   +V P+ F I  VL AC     L  G
Sbjct: 202 VVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG 261

Query: 444 KQIHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIA 608
           + +H +  K  +  N  V   L+ +Y +CG  ++ + V DEM DRDV+    MI+
Sbjct: 262 RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS 316


>ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
           cacao] gi|508702602|gb|EOX94498.1| Basic
           helix-loop-helix DNA-binding superfamily protein
           [Theobroma cacao]
          Length = 600

 Score =  154 bits (389), Expect = 3e-35
 Identities = 77/218 (35%), Positives = 129/218 (59%)
 Frame = +3

Query: 102 ISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTRQPNV 281
           +  ++ C NL+Q+  I+  ++K +   D F+  + + AC+ F  +DYAI  FT+ ++PNV
Sbjct: 52  VDQIKKCSNLNQLETIYATMIKTNANQDCFLTNQFVSACATFCRMDYAILAFTQMQKPNV 111

Query: 282 YLYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQIHGH 461
           ++Y ALI GLV C   + A+ ++  M+   V+P +F  +S++KAC L  +LG G+ +HG 
Sbjct: 112 FVYNALIKGLVHCHNPFQALDYHKHMLRAGVWPSSFTFSSLVKACGLVSELGFGESVHGQ 171

Query: 462 GLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKLVERG 641
             K G  S+  V+  L++ Y   G+F + K+V DEM DRDV A T M++ +L+   +   
Sbjct: 172 VWKHGFESHVFVQTALVDFYANVGKFAESKRVFDEMPDRDVFAWTTMVSGFLKAGDLVSS 231

Query: 642 CTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRM 755
             +FD +  ++T  W AMIDG  R  ++  A  +F +M
Sbjct: 232 RRLFDEMPERNTATWNAMIDGYARVGDVESAELFFNQM 269


>ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Citrus sinensis]
          Length = 541

 Score =  147 bits (372), Expect = 3e-33
 Identities = 82/224 (36%), Positives = 125/224 (55%), Gaps = 5/224 (2%)
 Frame = +3

Query: 102 ISLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTRQPNV 281
           + +LQ+C NL ++  IHT I+K      +F+V +++  C+    + YA  +F + ++PNV
Sbjct: 18  VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77

Query: 282 YLYTALIDGLVACGLYYDAIGFYFQMIVNS-----VFPDNFVINSVLKACLLELDLGTGK 446
           +LY A+I       LY  AI  Y QM+ +      + PD F +  V+K+C   L    GK
Sbjct: 78  FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137

Query: 447 QIHGHGLKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHK 626
           QIH H  K GL S+   +  L++LYGKC E  +  KV +EMTDRD+VA   +I+ Y    
Sbjct: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197

Query: 627 LVERGCTVFDLVEVKDTVCWTAMIDGLVRNDEMSKALEYFRRMQ 758
            +++   +FD +  K  V WTAMI G       ++AL+ FR+MQ
Sbjct: 198 QMKKARMLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 4/223 (1%)
 Frame = +3

Query: 105 SLLQNCRNLDQIAPIHTNIVKNDQEHDHFVVFELLRACSRFNAIDYAIKVFTRTRQPNVY 284
           +LL      D++   H  + +   + D      L+   +R   +  A  +F +     + 
Sbjct: 157 ALLDLYGKCDELIEAH-KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYKTIV 215

Query: 285 LYTALIDGLVACGLYYDAIGFYFQMIVNSVFPDNFVINSVLKACLLELDLGTGKQIHGHG 464
            +TA+I G    G Y +A+  + QM +  + PD   I SVL AC     L  G+ IH + 
Sbjct: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275

Query: 465 LKLGLCSNRQVKLKLMELYGKCGEFEDMKKVLDEMTDRDVVAMTVMIASYLEHKLVERGC 644
            K  L     +   L+E+Y KCG      ++ D+M +RDVV+ + +I     H    +  
Sbjct: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335

Query: 645 TVF-DLVEVK---DTVCWTAMIDGLVRNDEMSKALEYFRRMQK 761
            +F ++  +K   + + +  ++         ++ L YF  M++
Sbjct: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378