BLASTX nr result

ID: Mentha29_contig00040379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00040379
         (211 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42299.1| hypothetical protein MIMGU_mgv1a024554mg [Mimulus...    70   3e-10
gb|EXB70678.1| Ribosome biogenesis GTPase A [Morus notabilis]          59   9e-07
ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp....    59   9e-07
ref|XP_006287968.1| hypothetical protein CARUB_v10001203mg [Caps...    58   2e-06
ref|XP_007219437.1| hypothetical protein PRUPE_ppa020684mg [Prun...    57   3e-06

>gb|EYU42299.1| hypothetical protein MIMGU_mgv1a024554mg [Mimulus guttatus]
          Length = 369

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = +1

Query: 19  WARSARNEQCYPSLLAGDGTSILGKKK-RQYPTDSTQDFIVNNVRRAIFDSISSFGGCVE 195
           W +  R E     L   +GTS   K++ +QYP+D TQDF+VNNVRR +FD++SSF GC+E
Sbjct: 253 WGKLPRVETVGEVLTNNEGTSGPNKRRNKQYPSDHTQDFVVNNVRRTLFDAVSSFAGCLE 312

Query: 196 DGED 207
           +GED
Sbjct: 313 NGED 316


>gb|EXB70678.1| Ribosome biogenesis GTPase A [Morus notabilis]
          Length = 370

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
 Frame = +1

Query: 19  WARSARNEQCYP----SLLAGDGTSILGKKKRQYPTDSTQDFIVNNVRRAIFDSISSFGG 186
           W++ ++NE   P          G  +  K++RQYPTD TQDFIVN+VR+ +F+ ISSF G
Sbjct: 252 WSKLSKNEIVKPLADHKAERSSGVKMDAKRRRQYPTDHTQDFIVNDVRQTLFEKISSFDG 311

Query: 187 CVEDGEDL 210
            + D  +L
Sbjct: 312 NMNDESNL 319


>ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320477|gb|EFH50899.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/66 (43%), Positives = 44/66 (66%)
 Frame = +1

Query: 1   SFPSLTWARSARNEQCYPSLLAGDGTSILGKKKRQYPTDSTQDFIVNNVRRAIFDSISSF 180
           S+    WA+  +++    SL + + +   GK+KRQYPTD TQDFIV +VRR ++ +IS+F
Sbjct: 249 SYEYKKWAKLCKSQDLTESL-SDESSKSDGKRKRQYPTDHTQDFIVYDVRRVLYQTISAF 307

Query: 181 GGCVED 198
            G +ED
Sbjct: 308 DGNLED 313


>ref|XP_006287968.1| hypothetical protein CARUB_v10001203mg [Capsella rubella]
           gi|482556674|gb|EOA20866.1| hypothetical protein
           CARUB_v10001203mg [Capsella rubella]
          Length = 373

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = +1

Query: 19  WARSARNEQCYPSLLAGDGTSILG-KKKRQYPTDSTQDFIVNNVRRAIFDSISSFGGCVE 195
           WA+  +++    SL   +GTS+   K+KRQYPTD TQDFIV +VRR ++++IS+F G +E
Sbjct: 255 WAKLCKSQDLRESL--SNGTSMSDTKRKRQYPTDHTQDFIVYHVRRVLYETISAFDGELE 312

Query: 196 D 198
           D
Sbjct: 313 D 313


>ref|XP_007219437.1| hypothetical protein PRUPE_ppa020684mg [Prunus persica]
           gi|462415899|gb|EMJ20636.1| hypothetical protein
           PRUPE_ppa020684mg [Prunus persica]
          Length = 370

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 91  KKKRQYPTDSTQDFIVNNVRRAIFDSISSFGGCVED 198
           K+KRQYPTD TQDFIV++VRR +F+ ISSF G VED
Sbjct: 281 KRKRQYPTDHTQDFIVHDVRRTLFEVISSFDGNVED 316


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