BLASTX nr result

ID: Mentha29_contig00039239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00039239
         (222 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305927.1| PREDICTED: F-box protein At5g07610-like [Fra...    56   4e-06
ref|XP_007029914.1| F-box family protein, putative [Theobroma ca...    56   6e-06
ref|XP_002520646.1| conserved hypothetical protein [Ricinus comm...    55   1e-05

>ref|XP_004305927.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
           vesca]
          Length = 397

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +3

Query: 3   EDLLIEILLFLPAKPLVKFKIVSKKWNSLISSPFFC 110
           E+LL EILL LPAKPLV+FK VSK W SLIS+P FC
Sbjct: 22  EELLTEILLLLPAKPLVRFKCVSKHWLSLISNPNFC 57


>ref|XP_007029914.1| F-box family protein, putative [Theobroma cacao]
           gi|508718519|gb|EOY10416.1| F-box family protein,
           putative [Theobroma cacao]
          Length = 393

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = +3

Query: 3   EDLLIEILLFLPAKPLVKFKIVSKKWNSLISSPFFC 110
           EDLL EILL LPAKPL+KFK VSK+W SLISS  FC
Sbjct: 16  EDLLTEILLRLPAKPLLKFKFVSKEWFSLISSSQFC 51


>ref|XP_002520646.1| conserved hypothetical protein [Ricinus communis]
           gi|223540166|gb|EEF41742.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 397

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   EDLLIEILLFLPAKPLVKFKIVSKKWNSLISSPFF 107
           EDLLIEILL LP K L+KFK VSK+WNSLISS +F
Sbjct: 20  EDLLIEILLRLPVKTLLKFKCVSKQWNSLISSSYF 54


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