BLASTX nr result

ID: Mentha29_contig00038675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00038675
         (330 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42646.1| hypothetical protein MIMGU_mgv1a019227mg [Mimulus...   104   1e-20
ref|NP_179165.1| pentatricopeptide repeat-containing protein [Ar...    58   1e-06
ref|XP_006297214.1| hypothetical protein CARUB_v10013223mg [Caps...    56   6e-06

>gb|EYU42646.1| hypothetical protein MIMGU_mgv1a019227mg [Mimulus guttatus]
          Length = 534

 Score =  104 bits (259), Expect = 1e-20
 Identities = 58/113 (51%), Positives = 69/113 (61%), Gaps = 5/113 (4%)
 Frame = +2

Query: 5   MKVRSIPTLYKLRRLKFLPLQVQHHRFSSSVHXXXXXXXXXXXX-----DVLVSLVKSSQ 169
           MK   I + YK  R  F P+QV H RFSS+                   + LVS V+SS 
Sbjct: 1   MKPHKILSPYKFSRRYFPPIQVDHRRFSSTTARPPPPPPPPPPRISVSPETLVSTVESSN 60

Query: 170 WDSINHLAPNLNPALIASTLLHLRDFPVLAVNFFGNIDRFSLTTECYCIAVAI 328
           W  I HL+PN  PALI+STLLHLR  P+LA++F  NIDR SLTTECYC+AVAI
Sbjct: 61  WHLIKHLSPNFTPALISSTLLHLRRSPLLALSFIENIDRSSLTTECYCLAVAI 113


>ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
           gi|4335729|gb|AAD17407.1| putative salt-inducible
           protein [Arabidopsis thaliana]
           gi|330251331|gb|AEC06425.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/64 (39%), Positives = 42/64 (65%)
 Frame = +2

Query: 137 DVLVSLVKSSQWDSINHLAPNLNPALIASTLLHLRDFPVLAVNFFGNIDRFSLTTECYCI 316
           ++L+  ++SSQW  + H+A  L P+L+++TLL L   P LA NF  +ID + L  +  C+
Sbjct: 48  EILLESIRSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQTQCL 107

Query: 317 AVAI 328
           A+A+
Sbjct: 108 AIAV 111


>ref|XP_006297214.1| hypothetical protein CARUB_v10013223mg [Capsella rubella]
           gi|482565923|gb|EOA30112.1| hypothetical protein
           CARUB_v10013223mg [Capsella rubella]
          Length = 623

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/64 (39%), Positives = 41/64 (64%)
 Frame = +2

Query: 137 DVLVSLVKSSQWDSINHLAPNLNPALIASTLLHLRDFPVLAVNFFGNIDRFSLTTECYCI 316
           D+L+  +KSSQW  + HL+    P+L+++TLL+L   P LA+ F  +ID   L  +  C+
Sbjct: 44  DILLDSIKSSQWHIVEHLSDKFTPSLLSTTLLNLVKTPDLALGFVNHIDLRCLDFQTQCL 103

Query: 317 AVAI 328
           A+A+
Sbjct: 104 AIAV 107


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