BLASTX nr result
ID: Mentha29_contig00036732
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00036732
(1607 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, part... 417 e-114
ref|XP_007206823.1| hypothetical protein PRUPE_ppa025991mg [Prun... 398 e-108
ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, part... 397 e-108
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 396 e-107
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 392 e-106
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 392 e-106
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 390 e-106
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 390 e-105
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 389 e-105
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 385 e-104
ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobrom... 384 e-104
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 383 e-103
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 383 e-103
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun... 383 e-103
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 383 e-103
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 383 e-103
ref|XP_007019474.1| Uncharacterized protein TCM_035549 [Theobrom... 382 e-103
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The... 382 e-103
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 382 e-103
ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobrom... 377 e-101
>ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica]
gi|462403623|gb|EMJ09180.1| hypothetical protein
PRUPE_ppa015715mg, partial [Prunus persica]
Length = 1445
Score = 417 bits (1072), Expect = e-114
Identities = 200/396 (50%), Positives = 269/396 (67%), Gaps = 6/396 (1%)
Frame = +3
Query: 75 YLTDPFFGPLLQRVGDG---DVLEFVLIDGFLFKGTRLCIPECSLRLKLVTELHG---VG 236
Y + P FG + V +G + ++F+ DGFLF+GT+LCIP SLR LV ELHG G
Sbjct: 941 YSSCPDFGIIFHEVSNGNRREYVDFITRDGFLFRGTQLCIPRTSLREFLVWELHGGGLAG 1000
Query: 237 HVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCLPWVSI 416
H G+D++I LV+ ++WP+L RDVA + +CR CQ+AK NTGLY PLP+P PW +
Sbjct: 1001 HFGKDKTIALVEDRFYWPSLKRDVAHLISQCRTCQLAKARKRNTGLYTPLPIPHTPWKDL 1060
Query: 417 NMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLHGLPSS 596
+MDFVLGLP+T G++SIF++VDRFSKM+HF+ C K DA +VA+LFF+E+ RLHGLP S
Sbjct: 1061 SMDFVLGLPKTSRGYDSIFVIVDRFSKMAHFLPCAKNTDASYVAKLFFKEVVRLHGLPVS 1120
Query: 597 IVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVGDHLRS 776
IVSDRD F+S+FW++LW++ L FSSA+HPQTDGQTEVVNRSLG+LLRCLVGD +
Sbjct: 1121 IVSDRDVKFVSYFWKTLWKLFGTTLKFSSAFHPQTDGQTEVVNRSLGDLLRCLVGDKPGN 1180
Query: 777 WDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADLMNNLR 956
WD LP AEFA+N++VNRSTG PF++V+ PR P +L+ +P R A ++R
Sbjct: 1181 WDLLLPVAEFAYNNSVNRSTGKSPFEVVHGFSPRSPVDLVALPVAARTSDSATSFAEHIR 1240
Query: 957 TTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAARKIGP 1136
H Q+ YK AA+ HRR EF GDFV + +R+ H + KL AR +GP
Sbjct: 1241 QLHDDVRRQISMHTDTYKLAANAHRRQQEFREGDFVMVRVCPERFPKHSFKKLHARSMGP 1300
Query: 1137 VEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYG 1244
I++K+ N Y ++LP+ + S +FNV L P+ G
Sbjct: 1301 YRIIKKLGSNAYLIELPADMHISPIFNVSDLSPYRG 1336
>ref|XP_007206823.1| hypothetical protein PRUPE_ppa025991mg [Prunus persica]
gi|462402465|gb|EMJ08022.1| hypothetical protein
PRUPE_ppa025991mg [Prunus persica]
Length = 1274
Score = 398 bits (1022), Expect = e-108
Identities = 192/396 (48%), Positives = 264/396 (66%), Gaps = 6/396 (1%)
Frame = +3
Query: 75 YLTDPFFGPLLQRVGDG---DVLEFVLIDGFLFKGTRLCIPECSLRLKLVTELHG---VG 236
Y + P FG + V +G + ++F+ DGFLF+ T+LCIP SL LV ELHG G
Sbjct: 770 YSSCPDFGIIFHEVSNGNRREYVDFITRDGFLFRRTQLCIPRTSLLEFLVWELHGGGLAG 829
Query: 237 HVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCLPWVSI 416
H G+D++I LV+ ++WP+L RDVA + +CR CQ+AK NTG+Y PLP+P PW +
Sbjct: 830 HFGKDKTIALVEDHFYWPSLKRDVAHLISQCRTCQLAKARKRNTGVYTPLPIPHAPWKDL 889
Query: 417 NMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLHGLPSS 596
+MDFVLGLP+T G++SIF++VD FSKM+HF+ C K DA ++A+LFF+E+ RLHGL S
Sbjct: 890 SMDFVLGLPKTSRGYDSIFVIVDCFSKMAHFLPCAKNTDASYMAKLFFKEVVRLHGLLVS 949
Query: 597 IVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVGDHLRS 776
IVSDRD F+S+FW++LW++ L FSSA+HPQTDGQTEVVNRSLG+LL CLVGD +
Sbjct: 950 IVSDRDFKFVSYFWKTLWKLFGTTLKFSSAFHPQTDGQTEVVNRSLGDLLHCLVGDKPGN 1009
Query: 777 WDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADLMNNLR 956
WD LP AEF +N++VNRSTG PF++V+ PR P +L+ +P R A ++R
Sbjct: 1010 WDLLLPVAEFTYNNSVNRSTGKSPFEVVHGFSPRSPVDLVALPVAARSSDSATSFAEHIR 1069
Query: 957 TTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAARKIGP 1136
H Q+ YK AA+ HRR EF GDFV + +R+ H + KL AR +GP
Sbjct: 1070 QLHDDVRRQISMHTDTYKLAANAHRRQQEFREGDFVMVRVCPERFPKHSFKKLHARSMGP 1129
Query: 1137 VEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYG 1244
I++K+ N Y ++LP+++ S +FNV L P+ G
Sbjct: 1130 YRIIKKLGSNAYLIELPANMHISPIFNVSDLSPYRG 1165
>ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, partial [Prunus persica]
gi|462418685|gb|EMJ22948.1| hypothetical protein
PRUPE_ppb022800mg, partial [Prunus persica]
Length = 722
Score = 397 bits (1021), Expect = e-108
Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 6/396 (1%)
Frame = +3
Query: 75 YLTDPFFGPLLQRV---GDGDVLEFVLIDGFLFKGTRLCIPECSLRLKLVTELHG---VG 236
Y + P FG + Q V D ++F+L DG+LF+GT+LCIP SLR LV ELH G
Sbjct: 225 YSSCPDFGLIFQEVTARNRRDHVDFLLRDGYLFRGTQLCIPRTSLRDFLVWELHAGGLAG 284
Query: 237 HVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCLPWVSI 416
H G+D++I LV ++WP+L RDVA L +CR CQ+AK NTGLY PLP+P PW +
Sbjct: 285 HFGKDKTITLVADRFYWPSLKRDVAHILAQCRTCQLAKARKQNTGLYTPLPIPHTPWKDL 344
Query: 417 NMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLHGLPSS 596
+MDFVLGLP+T GH+SI +VVDRFSKM+HF+ C K DA +VA+LFF+E+ LHGLP S
Sbjct: 345 SMDFVLGLPKTARGHDSILVVVDRFSKMAHFLPCSKAADASYVAKLFFKEVIHLHGLPVS 404
Query: 597 IVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVGDHLRS 776
IVSDRD F+S+FW++LW++ L FSSA+HPQTDGQTEVVNRSL +LLRCLVGD +
Sbjct: 405 IVSDRDVKFVSYFWKTLWKLFGTSLKFSSAFHPQTDGQTEVVNRSLRDLLRCLVGDKQGN 464
Query: 777 WDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADLMNNLR 956
WD LP AEFA+N++ NR+TG PF+IVY V+PR P +L +P R A ++R
Sbjct: 465 WDLILPVAEFAYNNSANRTTGKSPFEIVYGVMPRPPIDLAPLPIDARPSESATTFAEHIR 524
Query: 957 TTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAARKIGP 1136
++ + + Y+ AA+ HRR +F+ GD+V + +R+ H + KL AR +GP
Sbjct: 525 -------QKISLSTNTYQLAANTHRRTQDFQEGDYVMVRVCPERFPKHSFKKLHARSMGP 577
Query: 1137 VEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYG 1244
I+ K+ N Y ++LPS + S +FNV L P+ G
Sbjct: 578 YRILRKLGANAYLVELPSDVHISPIFNVSDLFPYRG 613
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 396 bits (1018), Expect = e-107
Identities = 198/430 (46%), Positives = 274/430 (63%), Gaps = 4/430 (0%)
Frame = +3
Query: 54 LAFLVDLYLTDPFFGPLLQRVGDGDVL-EFVLIDGFLFKGTRLCIPECSLRLKLVTELHG 230
L + D Y D F +L DG +FV+ DGF+F+ +LCIP S+RL L+ E HG
Sbjct: 1143 LETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHG 1202
Query: 231 ---VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCL 401
+GH G ++ +++ +FWP + RDV RF+ RC CQ AK GLY PLPVP +
Sbjct: 1203 GGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTV 1262
Query: 402 PWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLH 581
PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM+HFI C KT DA H+A LFFREI RLH
Sbjct: 1263 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLH 1322
Query: 582 GLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVG 761
G+P++IVSDRDT FLS FWR+LW +L FS+ HPQTDGQTEVVNR+L +LR ++
Sbjct: 1323 GVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 1382
Query: 762 DHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADL 941
+++ W+ LP EFA+N +++ +T CPFQIVY +LPR P +L+ +P +++ A
Sbjct: 1383 KNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQR 1442
Query: 942 MNNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAA 1121
+ H+ T + N++YK A D+ RR + FE GD VW L K+R+ +KL
Sbjct: 1443 AELMLKLHETTKENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMP 1502
Query: 1122 RKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSDGGSESRSTRSSV 1301
R GP +++ K+N N Y++ LP+ S FNV L P+ G+ D + ESR+T+
Sbjct: 1503 RADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEEDEL-----ESRTTQMQE 1557
Query: 1302 GENDDDIEAL 1331
GE+D+DI +
Sbjct: 1558 GEDDEDINTI 1567
Score = 226 bits (576), Expect = 2e-56
Identities = 139/391 (35%), Positives = 208/391 (53%), Gaps = 9/391 (2%)
Frame = +3
Query: 84 DPFFGPLLQRVGDGDVLEFVLID-GFLFKGTRLCIPEC-SLRLKLVTELHGVG---HVGR 248
DP LL+ + G F+ + G L+ R+C+P+ L+ ++ E H H G
Sbjct: 1973 DPDMRGLLKNMKQGKAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPGS 2032
Query: 249 DRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATN-TGLYRPLPVPCLPWVSINMD 425
+ ++ Y+W ++ R++A F+ C VCQ K GL +PL VP W I MD
Sbjct: 2033 TKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMD 2092
Query: 426 FVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLHGLPSSIVS 605
F+ GLP+TQ G++SI++VVDR +K++ FI + T +A+L+F I LHG+P IVS
Sbjct: 2093 FITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGVPKKIVS 2152
Query: 606 DRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVGDHLRSWDS 785
DR++ F S FW+ L RL+FS+AYHPQTDGQTE +N+ L ++L V D ++WD
Sbjct: 2153 DRESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLDFGKTWDK 2212
Query: 786 HLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADLMNNLRTTH 965
LP AEF++N++ S P++ +Y R P L D++
Sbjct: 2213 SLPYAEFSYNNSYQASIQMAPYEALYGRKCRTP---LLWDQVGESQVFGTDILREAEAKV 2269
Query: 966 QATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDR--YTAHEYNKLAARKIGPV 1139
+ L A SR K+ AD RR +EF V DFV+ +T R + KLA R +GP
Sbjct: 2270 RTIWDNLKVAQSRQKSYADNRRRNLEFAVDDFVYLRVTPLRGVHRFQTKGKLAPRFVGPF 2329
Query: 1140 EIVEKVNPNVYRLKLPSHI-RTSDVFNVKHL 1229
I+ + Y+L+LP+ + DVF+V L
Sbjct: 2330 RIIARRGEVAYQLELPASLGNVHDVFHVSQL 2360
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 392 bits (1008), Expect = e-106
Identities = 199/430 (46%), Positives = 276/430 (64%), Gaps = 7/430 (1%)
Frame = +3
Query: 54 LAFLVDLYLTDPFFGPLLQRVGDGDVL-EFVLIDGFLFKGTRLCIPECSLRLKLVTELHG 230
L + D Y+ D F +L DG ++++ DGF+F+ +LCIP S+RL L+ E HG
Sbjct: 1146 LETIKDQYVHDADFKDVLLHCKDGKGWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHG 1205
Query: 231 ---VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCL 401
+GH G ++ +++ +FWP + RDV R + RC CQ AK GLY PLPVP
Sbjct: 1206 GGLMGHFGAKKTEDILAGHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSA 1265
Query: 402 PWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLH 581
PW I+MDFVLGLPRT+ G +S+F+VVDRFSKM+HFI C KT DA H+A LFFREI RLH
Sbjct: 1266 PWEDISMDFVLGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLH 1325
Query: 582 GLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVG 761
G+P++IVSDRD FLS FWR+LW +L FS+ HPQTDGQTEVVNR+L +LR ++
Sbjct: 1326 GVPNTIVSDRDAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 1385
Query: 762 DHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVD---ARA 932
+++ W+ LP EFA+N +++ +T CPFQIVY +LPR P +L+ +P +++ R
Sbjct: 1386 KNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRR 1445
Query: 933 ADLMNNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNK 1112
A+LM L H+ T + N+RYK A+D+ R+ + FE GD VW L K+R+ +K
Sbjct: 1446 AELMLKL---HETTKENIERMNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSK 1502
Query: 1113 LAARKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSDGGSESRSTR 1292
L R GP +++EK+N N YRL LP+ S FN+ L P+ G+ + ESR+T+
Sbjct: 1503 LLPRADGPFKVLEKINDNAYRLDLPADFGVSPTFNIADLKPYLGEEVEL-----ESRTTQ 1557
Query: 1293 SSVGENDDDI 1322
GEND+DI
Sbjct: 1558 MQEGENDEDI 1567
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 392 bits (1007), Expect = e-106
Identities = 199/430 (46%), Positives = 275/430 (63%), Gaps = 4/430 (0%)
Frame = +3
Query: 54 LAFLVDLYLTDPFFGPLLQRVGDGDVL-EFVLIDGFLFKGTRLCIPECSLRLKLVTELHG 230
L + D Y+ D F +LQ +G +FVL DGF+F+ +LCIP S+RL L+ E HG
Sbjct: 1187 LETIKDQYVHDAEFKDVLQNCKEGRTWNKFVLNDGFVFRANKLCIPASSVRLLLLQEAHG 1246
Query: 231 ---VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCL 401
+GH G ++ +++ +FWP + RDV RF+ RC CQ AK GLY PLPVP +
Sbjct: 1247 GGLMGHFGVKKTEDILATHFFWPKMRRDVERFVARCTTCQRAKSRLNPHGLYMPLPVPSV 1306
Query: 402 PWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLH 581
PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM+HFI C K+ DA++VA LFFREI RLH
Sbjct: 1307 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAVNVADLFFREIIRLH 1366
Query: 582 GLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVG 761
G+P++IVSDRDT FLS FWR LW +L FS+ HPQTDGQTEVVNR+L +LR ++
Sbjct: 1367 GVPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 1426
Query: 762 DHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADL 941
++ + W+ LP EFA+N +++ +T CPF+IVY LPR P +LL +P +V+ A +
Sbjct: 1427 NNKKMWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKER 1486
Query: 942 MNNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAA 1121
+ H+ T + N++YK A D+ R+ V F GD VW L KDR+ +KL
Sbjct: 1487 SELILKIHELTKENIERMNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMP 1546
Query: 1122 RKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSDGGSESRSTRSSV 1301
R GP +++EK+N N Y+L+LP+ S FN+ L P+ G+ D + SR+T
Sbjct: 1547 RADGPFKVLEKINDNAYKLELPADFGVSPTFNIADLKPYLGEEDEL-----PSRTTSFQE 1601
Query: 1302 GENDDDIEAL 1331
GE+D+DI +
Sbjct: 1602 GEDDEDINTI 1611
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 390 bits (1002), Expect = e-106
Identities = 198/431 (45%), Positives = 274/431 (63%), Gaps = 4/431 (0%)
Frame = +3
Query: 54 LAFLVDLYLTDPFFGPLLQRVGDGDVL-EFVLIDGFLFKGTRLCIPECSLRLKLVTELHG 230
L + D Y+ D F +L+ +G +F++ +GF+F+ +LCIP S+RL L+ E HG
Sbjct: 1202 LETIKDQYVHDADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHG 1261
Query: 231 ---VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCL 401
+GH G + +++ +FWP + RDV RF+ RC CQ AK GLY PLPVP +
Sbjct: 1262 GGLMGHFGVKKMEDVLATHFFWPRMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSV 1321
Query: 402 PWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLH 581
PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM+HFI C K+ DA +VA LFFREI RLH
Sbjct: 1322 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLH 1381
Query: 582 GLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVG 761
G+P++IVSDRD FLS FWR LW +L FS+ HPQTDGQTEVVNRSL +LR ++
Sbjct: 1382 GVPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLK 1441
Query: 762 DHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADL 941
++++ W+ LP EFA+N +++ +T CPF+IVY LPR P +LL +P +V+ A +
Sbjct: 1442 NNIKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKER 1501
Query: 942 MNNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAA 1121
+ H+ T + N+RYK A D+ R+ V F GD VW L KDR+ +KL
Sbjct: 1502 AELILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMP 1561
Query: 1122 RKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSDGGSESRSTRSSV 1301
R GP +++EK+N N YRL+LP+ S FN+ L P+ G+ D + SR+T
Sbjct: 1562 RAGGPFKVLEKINDNAYRLELPADFGVSPTFNIADLKPYLGEEDEL-----PSRTTSVQE 1616
Query: 1302 GENDDDIEALA 1334
GE+D+DI +A
Sbjct: 1617 GEDDEDINTIA 1627
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 390 bits (1001), Expect = e-105
Identities = 196/430 (45%), Positives = 271/430 (63%), Gaps = 4/430 (0%)
Frame = +3
Query: 54 LAFLVDLYLTDPFFGPLLQRVGDGDVL-EFVLIDGFLFKGTRLCIPECSLRLKLVTELHG 230
L + D Y D F +L DG +FV+ DGF+F+ +LCIP S+RL L+ E HG
Sbjct: 1122 LETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHG 1181
Query: 231 ---VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCL 401
+GH G ++ +++ +FWP + RDV RF+ RC CQ AK GLY PLPVP +
Sbjct: 1182 GGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTV 1241
Query: 402 PWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLH 581
PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM HFI C KT DA H+A LFFREI RLH
Sbjct: 1242 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMVHFIPCHKTDDASHIADLFFREIVRLH 1301
Query: 582 GLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVG 761
G+P++IVSDRDT FLS FWR+LW +L FS+ HPQTDGQ EVVNR+L +LR ++
Sbjct: 1302 GVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQIEVVNRTLSTMLRAVLK 1361
Query: 762 DHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADL 941
+++ W+ LP EFA N +++ +T CPFQIVY +LPR P +L+ +P +++ A
Sbjct: 1362 KNIKMWEECLPHIEFACNRSLHSTTKMCPFQIVYSLLPRAPIDLMPLPSSEKLNFDAKQR 1421
Query: 942 MNNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAA 1121
+ H+ T + N++YK A D+ RR + FE GD VW L K+R+ +KL
Sbjct: 1422 AELMLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMP 1481
Query: 1122 RKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSDGGSESRSTRSSV 1301
R GP +++ K+N N Y++ LP+ S FNV L P+ G+ D + ESR+T+
Sbjct: 1482 RADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEEDEL-----ESRTTQMQE 1536
Query: 1302 GENDDDIEAL 1331
GE+D++I +
Sbjct: 1537 GEDDENINTI 1546
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 389 bits (1000), Expect = e-105
Identities = 199/431 (46%), Positives = 272/431 (63%), Gaps = 4/431 (0%)
Frame = +3
Query: 54 LAFLVDLYLTDPFFGPLLQRVGDGDVL-EFVLIDGFLFKGTRLCIPECSLRLKLVTELHG 230
L + D Y+ D F +L+ +G +F++ +GF+F+ +LCIP S+RL L+ E HG
Sbjct: 1199 LETIKDQYVHDADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHG 1258
Query: 231 ---VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCL 401
+GH G + +++ +FWP + RDV RF+ RC CQ AK GLY PLPVP +
Sbjct: 1259 GGLMGHFGVKKMEDVLATHFFWPRMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSV 1318
Query: 402 PWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLH 581
PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM+HFI C K+ DA +VA LFFREI RLH
Sbjct: 1319 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLH 1378
Query: 582 GLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVG 761
G+P++IVSDRD FLS FWR LW +L FS+ HPQTDGQTEVVNRSL +LR ++
Sbjct: 1379 GVPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLK 1438
Query: 762 DHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADL 941
+L+ W+ LP EFA+N +++ +T CPF+IVY LPR P +LL +P +V+ A +
Sbjct: 1439 TNLKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKER 1498
Query: 942 MNNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAA 1121
+ H+ T + N+RYK A D+ R+ V F GD VW L KDR+ +KL
Sbjct: 1499 AELILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMP 1558
Query: 1122 RKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSDGGSESRSTRSSV 1301
R GP +++EK+N N YRL+LP S FN+ L P+ G+ D + SR+T
Sbjct: 1559 RAGGPFKVLEKINDNAYRLELPXDFGVSPTFNIADLKPYLGEEDEL-----PSRTTSVQE 1613
Query: 1302 GENDDDIEALA 1334
GE+D+DI +A
Sbjct: 1614 GEDDEDINTIA 1624
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 385 bits (989), Expect = e-104
Identities = 200/430 (46%), Positives = 276/430 (64%), Gaps = 7/430 (1%)
Frame = +3
Query: 54 LAFLVDLYLTDPFFGPLLQRVGDGDVL-EFVLIDGFLFKGTRLCIPECSLRLKLVTELHG 230
L + + Y D F +L +G +FVL +GF+F+ +LCIP S+R+ L+ E HG
Sbjct: 1171 LETIKEQYAHDDDFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHG 1230
Query: 231 ---VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCL 401
+GH G ++ +++ +FWP + RDV RF+ RC CQ AK GLY PLPVP +
Sbjct: 1231 GGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKLRLNPHGLYMPLPVPSV 1290
Query: 402 PWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLH 581
PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM+HFI C K+ DA HVA LFFREI RLH
Sbjct: 1291 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLH 1350
Query: 582 GLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVG 761
G+P++IVSDRDT FLS FWR+LW +L FS+ HPQTDGQTEVVNR+L +LR ++
Sbjct: 1351 GVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 1410
Query: 762 DHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARA--- 932
+++ W+ LP EFA+N + + +T CPF+IVY +LPR P +LL +P RV+ A
Sbjct: 1411 KNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYH 1470
Query: 933 ADLMNNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNK 1112
A+LM L H+ T + N +YK A + ++ V FE GD VW L KDR+ +K
Sbjct: 1471 AELMLKL---HETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSK 1527
Query: 1113 LAARKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSDGGSESRSTR 1292
L R GP ++++K+N N Y+L+LP+ S FN+ L P+ G+ D + ESR+T+
Sbjct: 1528 LLPRADGPFKVLQKINDNTYKLELPADFGVSPTFNIADLKPYLGEEDEL-----ESRTTQ 1582
Query: 1293 SSVGENDDDI 1322
GE+D+DI
Sbjct: 1583 MQEGEDDEDI 1592
>ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobroma cacao]
gi|508724940|gb|EOY16837.1| Uncharacterized protein
TCM_035725 [Theobroma cacao]
Length = 499
Score = 384 bits (985), Expect = e-104
Identities = 188/400 (47%), Positives = 266/400 (66%), Gaps = 6/400 (1%)
Frame = +3
Query: 63 LVDLYLTDPFFGPL---LQRVGDGDVLEFVLIDGFLFKGTRLCIPECSLRLKLVTELHGV 233
L + Y D +F + LQ + L + L + +LFKG +LCIP+ SLR +++ ELHG
Sbjct: 15 LKNQYSFDSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPKGSLREQIIRELHGN 74
Query: 234 G---HVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCLP 404
G H GRD+++ +V Y+WP + RDV R ++RC C KG+A NTGLY PLP P P
Sbjct: 75 GLGGHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAP 134
Query: 405 WVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLHG 584
W+ ++MDFVL LP+T G +SIF+VVDRFSKM+HFI C +T DA H+A+LFFREI RLHG
Sbjct: 135 WIHLSMDFVLELPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVRLHG 194
Query: 585 LPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVGD 764
+P+SIVSDRD F+ FWR+LWR L +SS HPQTDGQTEVVNRSLGN+LRCL+ +
Sbjct: 195 IPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQN 254
Query: 765 HLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADLM 944
+ ++WD +PQAEFA+N++VNRS PF++ Y + P+ +L+ +P RV
Sbjct: 255 NPKTWDLVIPQAEFAYNNSVNRSIKKTPFEVAYGLKPQHVLDLVPLPQEARVSNEGELFA 314
Query: 945 NNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAAR 1124
+++R H+ L +N+ Y A++HRR EFE GD V L ++R+ Y+KL +R
Sbjct: 315 DHIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSR 374
Query: 1125 KIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYG 1244
K GP ++++K++ N Y ++LP ++ S +FN+ L PF G
Sbjct: 375 KFGPCKVLKKISSNAYLIELPPELQISHIFNILDLYPFDG 414
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 383 bits (984), Expect = e-103
Identities = 195/429 (45%), Positives = 263/429 (61%), Gaps = 4/429 (0%)
Frame = +3
Query: 48 PSLAFLVDLYLTDPFFGPLLQRVGDGDVLE-FVLIDGFLFKGTRLCIPECSLRLKLVTEL 224
P + + +LY D F + G E + + DGFLF+ +LC+P CS+RL L+ E
Sbjct: 112 PGIESIKELYPADLDFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQET 171
Query: 225 HG---VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVP 395
H +GH G ++ +++ ++WP + RDV R ++RC C AK GLY PLPVP
Sbjct: 172 HAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVP 231
Query: 396 CLPWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYR 575
PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM+HFI C K+ DA H+A LFF EI R
Sbjct: 232 SAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVR 291
Query: 576 LHGLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCL 755
LHG+P +IVSDRDT FLS+FW++LW RL FS+ HPQTDGQTEVVNR+L LLR L
Sbjct: 292 LHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRAL 351
Query: 756 VGDHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAA 935
+ +L+ W+ LP EFA+N AV+ +T CPF++VY P P +LL +P R D A+
Sbjct: 352 IKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLAPIDLLPLPLQERSDMEAS 411
Query: 936 DLMNNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKL 1115
++ H+ T + + + Y A A++ R+ V FE GD VW L KDR+ +KL
Sbjct: 412 KHATYVKKIHEKTKEAIEKRSKYYAAWANKDRKKVTFEPGDLVWVHLRKDRFPQKRKSKL 471
Query: 1116 AARKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSDGGSESRSTRS 1295
R GP ++ K+N N Y+++LP S FNV L PF+G D S SRST
Sbjct: 472 MPRGDGPFRVLSKINDNAYKIELPEDYGVSPTFNVADLTPFFGLEDSES-----SRSTPF 526
Query: 1296 SVGENDDDI 1322
GE+D+DI
Sbjct: 527 QEGEDDEDI 535
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 383 bits (984), Expect = e-103
Identities = 195/427 (45%), Positives = 270/427 (63%), Gaps = 4/427 (0%)
Frame = +3
Query: 54 LAFLVDLYLTDPFFGPLLQRVGDGDVL-EFVLIDGFLFKGTRLCIPECSLRLKLVTELHG 230
L + + Y D F +L +G +FVL +GF+F+ +LCIP S+R+ L+ E HG
Sbjct: 1171 LETIKEQYAHDDDFKNVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHG 1230
Query: 231 ---VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCL 401
+GH G ++ +++ +FWP + RDV RF+ RC CQ AK GLY PLPVP +
Sbjct: 1231 GGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSV 1290
Query: 402 PWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLH 581
PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM+HFI C K+ DA HVA LFFREI RLH
Sbjct: 1291 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLH 1350
Query: 582 GLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVG 761
G+P++IVSDRDT FLS FWR+LW + FS+ HPQTDGQTEVVNR+L +LR ++
Sbjct: 1351 GVPNTIVSDRDTKFLSHFWRTLWAKLGTKFLFSTTCHPQTDGQTEVVNRTLSTMLRAVLK 1410
Query: 762 DHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADL 941
+++ W+ LP EFA+N + + +T CPF+IVY +LPR P +LL P RV+ A
Sbjct: 1411 KNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPHPTSERVNFDAKYR 1470
Query: 942 MNNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAA 1121
+ H+ T + N +YK A + ++ V FE GD VW L KDR+ +KL
Sbjct: 1471 AELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLP 1530
Query: 1122 RKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSDGGSESRSTRSSV 1301
R GP ++++K+N N Y+L+LP+ S FN+ L P+ G+ D + ESR+T+
Sbjct: 1531 RADGPFKVLQKINDNAYKLELPADFGVSPTFNIADLKPYLGEEDEL-----ESRTTQMQE 1585
Query: 1302 GENDDDI 1322
GE+D+DI
Sbjct: 1586 GEDDEDI 1592
>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
gi|462405925|gb|EMJ11389.1| hypothetical protein
PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 383 bits (983), Expect = e-103
Identities = 190/405 (46%), Positives = 266/405 (65%), Gaps = 4/405 (0%)
Frame = +3
Query: 63 LVDLYLTDPFFGPLLQRVGDGDVL-EFVLIDGFLFKGTRLCIPECSLRLKLVTELHG--- 230
L +LY D FG + + + + + ++ L +G+LFKG +LCIP SLR KL+ +LHG
Sbjct: 1053 LKELYEGDADFGEIWTKCTNQEPMADYFLNEGYLFKGNQLCIPVSSLREKLIRDLHGGGL 1112
Query: 231 VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCLPWV 410
GH+GRD++I ++ ++WP L RDV + +C CQ +KG NTGLY PLPVP W
Sbjct: 1113 SGHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQ 1172
Query: 411 SINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLHGLP 590
+ MDFVLGLPRTQ G +S+F+VVDRFSKM+HFI+CRKT DA ++A+LFFRE+ RLHG+P
Sbjct: 1173 DLAMDFVLGLPRTQRGVDSVFVVVDRFSKMAHFIACRKTADASNIAKLFFREVVRLHGVP 1232
Query: 591 SSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVGDHL 770
+SI SDRDT FLS FW +LWR+ L+ SS HPQTDGQTEV NR+LGN++R + G+
Sbjct: 1233 TSITSDRDTKFLSHFWITLWRLFGTTLNRSSTAHPQTDGQTEVTNRTLGNMVRSVCGEKP 1292
Query: 771 RSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADLMNN 950
+ WD LPQ EFA+NSAV+ +TG PF IVY +P +L+ +P + A +L
Sbjct: 1293 KQWDYALPQVEFAYNSAVHSATGKSPFSIVYTAMPNHVVDLVKLPRGQQTSVAAKNLAEE 1352
Query: 951 LRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAARKI 1130
+ +L + N++YKAAAD+HRR F+ GD V L K+R+ Y+KL +K
Sbjct: 1353 VVAVRDEVKQKLEQTNAKYKAAADKHRRVKVFQEGDSVMIFLRKERFPVGTYSKLKPKKY 1412
Query: 1131 GPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSD 1265
GP ++++++N N Y ++LP + S++FNV L F D +D
Sbjct: 1413 GPYKVLKRINDNAYVIELPDSMGISNIFNVADLYEFREDEVEGTD 1457
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 383 bits (983), Expect = e-103
Identities = 188/394 (47%), Positives = 251/394 (63%), Gaps = 3/394 (0%)
Frame = +3
Query: 150 DGFLFKGTRLCIPECSLRLKLVTELHG---VGHVGRDRSIELVQRSYFWPTLHRDVARFL 320
DGFLF+ +LC+P CS+RL L+ E H +GH G ++ +++ ++WP + RDV R +
Sbjct: 1179 DGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLV 1238
Query: 321 ERCRVCQVAKGTATNTGLYRPLPVPCLPWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKM 500
+RC C AK GLY PLPVP PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM
Sbjct: 1239 QRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKM 1298
Query: 501 SHFISCRKTLDALHVAQLFFREIYRLHGLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFS 680
+HFI C K+ DA H+A LFF EI RLHG+P +IVSDRDT FLS+FW++LW RL FS
Sbjct: 1299 AHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFS 1358
Query: 681 SAYHPQTDGQTEVVNRSLGNLLRCLVGDHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIV 860
+ HPQTDGQTEVVNR+L LLR L+ +L+ W+ LP EFA+N AV+ +T CPF++V
Sbjct: 1359 TTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVV 1418
Query: 861 YVVLPRGPSNLLTMPFPTRVDARAADLMNNLRTTHQATHTQLLEANSRYKAAADRHRRAV 1040
Y P P +LL +P R D A+ ++ H+ T + + + Y A A+++R+ V
Sbjct: 1419 YGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKV 1478
Query: 1041 EFEVGDFVWAVLTKDRYTAHEYNKLAARKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNV 1220
FE GD VW L KDR+ +KL R GP ++ K+N N Y+++LP S FNV
Sbjct: 1479 TFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSSTFNV 1538
Query: 1221 KHLVPFYGDNDHVSDGGSESRSTRSSVGENDDDI 1322
L PF+G D S SRST GE+D+DI
Sbjct: 1539 ADLTPFFGLEDSES-----SRSTPFQEGEDDEDI 1567
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 383 bits (983), Expect = e-103
Identities = 188/394 (47%), Positives = 251/394 (63%), Gaps = 3/394 (0%)
Frame = +3
Query: 150 DGFLFKGTRLCIPECSLRLKLVTELHG---VGHVGRDRSIELVQRSYFWPTLHRDVARFL 320
DGFLF+ +LC+P CS+RL L+ E H +GH G ++ +++ ++WP + RDV R +
Sbjct: 147 DGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLV 206
Query: 321 ERCRVCQVAKGTATNTGLYRPLPVPCLPWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKM 500
+RC C AK GLY PLPVP PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM
Sbjct: 207 QRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKM 266
Query: 501 SHFISCRKTLDALHVAQLFFREIYRLHGLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFS 680
+HFI C K+ DA H+A LFF EI RLHG+P +IVSDRDT FLS+FW++LW RL FS
Sbjct: 267 AHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFS 326
Query: 681 SAYHPQTDGQTEVVNRSLGNLLRCLVGDHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIV 860
+ HPQTDGQTEVVNR+L LLR L+ +L+ W+ LP EFA+N AV+ +T CPF++V
Sbjct: 327 TTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVV 386
Query: 861 YVVLPRGPSNLLTMPFPTRVDARAADLMNNLRTTHQATHTQLLEANSRYKAAADRHRRAV 1040
Y P P +LL +P R D A+ ++ H+ T + + + Y A A+++R+ V
Sbjct: 387 YGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKV 446
Query: 1041 EFEVGDFVWAVLTKDRYTAHEYNKLAARKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNV 1220
FE GD VW L KDR+ +KL R GP ++ K+N N Y+++LP S FNV
Sbjct: 447 TFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSSTFNV 506
Query: 1221 KHLVPFYGDNDHVSDGGSESRSTRSSVGENDDDI 1322
L PF+G D S SRST GE+D+DI
Sbjct: 507 ADLTPFFGLEDSES-----SRSTPFQEGEDDEDI 535
>ref|XP_007019474.1| Uncharacterized protein TCM_035549 [Theobroma cacao]
gi|508724802|gb|EOY16699.1| Uncharacterized protein
TCM_035549 [Theobroma cacao]
Length = 1392
Score = 382 bits (982), Expect = e-103
Identities = 189/400 (47%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Frame = +3
Query: 63 LVDLYLTDPFFGPL---LQRVGDGDVLEFVLIDGFLFKGTRLCIPECSLRLKLVTELHGV 233
L + Y +D +F + LQ + L + L + +LFKG +LCIPE SLR +++ ELHG
Sbjct: 908 LKNQYSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGN 967
Query: 234 G---HVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCLP 404
G H GRD+++ +V Y+WP + +DV R ++RC C KG+A NTGLY PLP P P
Sbjct: 968 GLGGHFGRDKTLAMVADRYYWPKMRQDVERLVKRCPTCLFGKGSAQNTGLYVPLPEPDAP 1027
Query: 405 WVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLHG 584
W+ ++MDFVLGLP+T +SIF+VVDRFSKM+HFI C +T DA H+A+LFFREI RLH
Sbjct: 1028 WIHLSMDFVLGLPKTAKRFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVRLHR 1087
Query: 585 LPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVGD 764
+P+SIVSDRD F+ FWR+LWR L +SS HPQTDGQTEVVNRSLGN+LRCL+ +
Sbjct: 1088 IPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQN 1147
Query: 765 HLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADLM 944
+ ++WD +PQAEFA+N++VNRS PF+ Y + P+ +L+ +P RV
Sbjct: 1148 NPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEPRVSNEGELFA 1207
Query: 945 NNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAAR 1124
+++R H+ T L +N++Y A++HRR EFE GD V L ++R+ Y+KL +R
Sbjct: 1208 DHIRKIHEEVKTALKASNAQYSFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSR 1267
Query: 1125 KIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYG 1244
K GP ++++K++ N Y ++LP ++ S +FNV L PF G
Sbjct: 1268 KFGPCKVLKKISSNAYLIELPPELQISPIFNVLDLYPFDG 1307
>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1452
Score = 382 bits (980), Expect = e-103
Identities = 187/400 (46%), Positives = 265/400 (66%), Gaps = 6/400 (1%)
Frame = +3
Query: 63 LVDLYLTDPFFGPL---LQRVGDGDVLEFVLIDGFLFKGTRLCIPECSLRLKLVTELHGV 233
L + Y +D +F + LQ + L + L + +LFKG +LCIPE SLR +++ ELHG
Sbjct: 968 LKNQYSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGN 1027
Query: 234 G---HVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCLP 404
G H GRD+++ +V Y+WP + RDV R ++RC C KG+A NTGLY PLP P P
Sbjct: 1028 GLGGHFGRDKTLVMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAP 1087
Query: 405 WVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLHG 584
W+ ++MDFVLGLP+T G +SIF+VVDRFSKM+HFI C +T DA H+A+LFFREI LHG
Sbjct: 1088 WIHLSMDFVLGLPKTTKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVILHG 1147
Query: 585 LPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVGD 764
+P+SIVSDR F+ +FWR+LWR L +SS HPQTDGQTEVVNRSLGN+LRCL+ +
Sbjct: 1148 IPTSIVSDRHVKFMGYFWRTLWRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQN 1207
Query: 765 HLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADLM 944
+ ++WD +PQAEFA+N++VNRS PF+ Y + P+ +L+ +P RV
Sbjct: 1208 NPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFA 1267
Query: 945 NNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAAR 1124
+ +R H+ L +N+ Y A++HRR EFE GD V L ++R+ Y+KL +R
Sbjct: 1268 DQIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSR 1327
Query: 1125 KIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYG 1244
K GP ++++K++ N Y ++LP ++ + +FN+ L PF G
Sbjct: 1328 KFGPCKVLKKISSNAYLIELPPELQINPIFNILDLYPFDG 1367
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 382 bits (980), Expect = e-103
Identities = 194/427 (45%), Positives = 270/427 (63%), Gaps = 4/427 (0%)
Frame = +3
Query: 54 LAFLVDLYLTDPFFGPLLQRVGDGDVL-EFVLIDGFLFKGTRLCIPECSLRLKLVTELHG 230
L + + Y D F +L +G +FVL +GF+F+ +LCIP S+ + L+ E HG
Sbjct: 1067 LETIKEQYAHDDDFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVHMLLLQEAHG 1126
Query: 231 ---VGHVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCL 401
+GH G ++ +++ FWP + RDV RF+ RC CQ AK GLY PLPVP +
Sbjct: 1127 GGLMGHFGVKKTEDILADHLFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSV 1186
Query: 402 PWVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLH 581
PW I+MDFVLGLPRT+ G +SIF+VVDRFSKM+HFI C K+ DA HVA LFFREI RLH
Sbjct: 1187 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLH 1246
Query: 582 GLPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVG 761
G+P++IVSDRDT FLS FWR+LW +L FS+ HPQTDGQTEVVNR++ +LR ++
Sbjct: 1247 GVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTVSTMLRAVLK 1306
Query: 762 DHLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADL 941
+++ W+ LP EFA+N + + +T CPF+IVY +LPR P +LL +P RV+ A
Sbjct: 1307 KNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTLERVNFDAKYR 1366
Query: 942 MNNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAA 1121
+ H+ T + N +YK A + ++ V FE GD VW L KDR+ +KL
Sbjct: 1367 AELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLPP 1426
Query: 1122 RKIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYGDNDHVSDGGSESRSTRSSV 1301
R GP ++++K+N N Y+L+LP+ S FN+ L P+ G+ D + ESR+T+
Sbjct: 1427 RADGPFQVLQKINDNAYKLELPADFGVSPTFNIADLKPYLGEEDEL-----ESRTTQMQE 1481
Query: 1302 GENDDDI 1322
GE+D+DI
Sbjct: 1482 GEDDEDI 1488
>ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobroma cacao]
gi|508727408|gb|EOY19305.1| Uncharacterized protein
TCM_044370 [Theobroma cacao]
Length = 1306
Score = 377 bits (967), Expect = e-101
Identities = 186/400 (46%), Positives = 262/400 (65%), Gaps = 6/400 (1%)
Frame = +3
Query: 63 LVDLYLTDPFFGPL---LQRVGDGDVLEFVLIDGFLFKGTRLCIPECSLRLKLVTELHGV 233
L + Y +D +F + LQ L + L + +LFKG +LCIPE LR +++ ELHG
Sbjct: 864 LKNQYSSDSYFSKIIADLQGSLQARNLPYRLHEAYLFKGNQLCIPEGYLREQIIRELHGN 923
Query: 234 G---HVGRDRSIELVQRSYFWPTLHRDVARFLERCRVCQVAKGTATNTGLYRPLPVPCLP 404
G H GRD+++ +V Y+WP + RDV R ++RC C KG+A NTGLY PLP P P
Sbjct: 924 GLGGHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPTCLFGKGSAQNTGLYVPLPEPDAP 983
Query: 405 WVSINMDFVLGLPRTQHGHNSIFIVVDRFSKMSHFISCRKTLDALHVAQLFFREIYRLHG 584
W+ ++MDFVLGLP+T G +SIF+VVDRFSKM+HFI C +T DA H+A+LFF E+ RLHG
Sbjct: 984 WIHLSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFCEVVRLHG 1043
Query: 585 LPSSIVSDRDTCFLSFFWRSLWRMANKRLDFSSAYHPQTDGQTEVVNRSLGNLLRCLVGD 764
+P+SIVSDRD F+ FWR+LWR L +SS HPQTD QTEVVNRSLGN+LRCL+ +
Sbjct: 1044 IPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSSTCHPQTDSQTEVVNRSLGNILRCLIQN 1103
Query: 765 HLRSWDSHLPQAEFAHNSAVNRSTGFCPFQIVYVVLPRGPSNLLTMPFPTRVDARAADLM 944
+ ++WD PQAEFA+N++VNRS PF+ Y + P+ +L+ +P RV
Sbjct: 1104 NPKTWDLVKPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFA 1163
Query: 945 NNLRTTHQATHTQLLEANSRYKAAADRHRRAVEFEVGDFVWAVLTKDRYTAHEYNKLAAR 1124
++++ H+ L +N+ Y A++HRR EFE GD V L ++R+ Y+KL +R
Sbjct: 1164 DHIQKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVYLRQERFPKGTYHKLKSR 1223
Query: 1125 KIGPVEIVEKVNPNVYRLKLPSHIRTSDVFNVKHLVPFYG 1244
K GP ++++K++ N Y ++LP ++ S +FNV L PF G
Sbjct: 1224 KFGPCKVLKKISSNAYLIELPPELQISHIFNVLDLYPFDG 1263