BLASTX nr result
ID: Mentha29_contig00035452
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00035452
(305 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 138 9e-31
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 134 2e-29
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 113 2e-23
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 113 2e-23
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 112 7e-23
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 111 9e-23
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group] 111 9e-23
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 111 9e-23
dbj|BAA22288.1| polyprotein [Oryza australiensis] 111 1e-22
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 110 2e-22
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 110 2e-22
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 110 2e-22
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 110 2e-22
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 110 2e-22
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 110 2e-22
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 108 1e-21
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 107 2e-21
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 107 2e-21
gb|ADB85411.1| putative retrotransposon protein [Phyllostachys e... 106 3e-21
gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japoni... 105 5e-21
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 138 bits (347), Expect = 9e-31
Identities = 69/101 (68%), Positives = 78/101 (77%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFD IKSYGF+Q++DEPCVYKKI N VA GNDVE L+
Sbjct: 957 LKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLT 1016
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
+VK WL TQFQMKDLGEA YILGI+IVR+RK + LAMSQAS
Sbjct: 1017 DVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQAS 1057
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 134 bits (336), Expect = 2e-29
Identities = 66/101 (65%), Positives = 78/101 (77%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+ F+E IKSYGF+Q++ EPCVYK+I KV GNDVE LS
Sbjct: 297 LKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIGGDKVVFLVLYVDDILLIGNDVESLS 356
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
+VK WLA+QFQMKDLGEASYILGI++ RDRK RLLA+SQA+
Sbjct: 357 KVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLALSQAA 397
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 113 bits (283), Expect = 2e-23
Identities = 56/101 (55%), Positives = 70/101 (69%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE+IK+ GF ++ +EPCVYKKIN + GND+ +L
Sbjct: 501 LKQASRSWNIRFDEVIKALGFVKNEEEPCVYKKINGSALMFLILYVDDILLIGNDIPMLE 560
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 561 SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 601
>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 113 bits (283), Expect = 2e-23
Identities = 56/101 (55%), Positives = 70/101 (69%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE+IK+ GF ++ +EPCVYKKIN + GND+ +L
Sbjct: 456 LKQASRSWNIRFDEVIKALGFVKNEEEPCVYKKINGSALMFLILYVDDILLIGNDIPMLE 515
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 516 SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 556
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 112 bits (279), Expect = 7e-23
Identities = 54/101 (53%), Positives = 70/101 (69%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE++K+ GF ++ +EPCVYKKI+ + GND+ +L
Sbjct: 818 LKQASRSWNIRFDEVVKALGFVRNEEEPCVYKKISGSALVFLILYVDDILLIGNDISMLE 877
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 878 SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 918
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 111 bits (278), Expect = 9e-23
Identities = 54/101 (53%), Positives = 70/101 (69%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE++K+ GF ++ +EPCVYKKI+ + GND+ +L
Sbjct: 877 LKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 936
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 937 SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 977
>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
Length = 746
Score = 111 bits (278), Expect = 9e-23
Identities = 54/101 (53%), Positives = 69/101 (68%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE++K+ GF ++ +EPCVYKKIN + GND+ +L
Sbjct: 556 LKQASRSWNIRFDEVVKASGFVKNEEEPCVYKKINRSALGFLILYVDDILLIGNDIPMLK 615
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
K L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 616 SAKTSLKNSFSMKDLGEATYILGIRIYRDRSKRLIGLSQST 656
>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 111 bits (278), Expect = 9e-23
Identities = 54/101 (53%), Positives = 70/101 (69%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE++K+ GF ++ +EPCVYKKI+ + GND+ +L
Sbjct: 867 LKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 926
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 927 SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 967
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 111 bits (277), Expect = 1e-22
Identities = 53/101 (52%), Positives = 69/101 (68%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE+IK +GF ++ +E CVYKK++ + GND+ +L
Sbjct: 947 LKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIGNDIPMLE 1006
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 1007 SVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 1047
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 110 bits (276), Expect = 2e-22
Identities = 55/101 (54%), Positives = 66/101 (65%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWNL F E +K +GF +S DE CVY K + V GND+ L
Sbjct: 930 LKQASRSWNLCFHEKVKEFGFSRSEDESCVYVKASGSIVTFLVLYVDDILLMGNDIPTLQ 989
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
+VK WL F MKDLGEA+YILGIRI+RDRKKRL+ +SQ +
Sbjct: 990 DVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGT 1030
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 110 bits (276), Expect = 2e-22
Identities = 53/100 (53%), Positives = 71/100 (71%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN FD+ IK++GFDQ DE CVYKK N KV GN + +L+
Sbjct: 262 LKQASRSWNTCFDQTIKTFGFDQCHDESCVYKKWNGKKVVFLVLYVDDILLIGNCIGMLT 321
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQA 302
VK WL+ +F MKDLGEA++ILGI+++R+RKK+++ +SQA
Sbjct: 322 SVKDWLSQRFDMKDLGEAAHILGIKLMRNRKKKMIGLSQA 361
>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 110 bits (276), Expect = 2e-22
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE++K+ GF ++ +EPCVYKKI+ + GND+ +L
Sbjct: 1411 LKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 1470
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YI+GIRI RDR KRL+ +SQ++
Sbjct: 1471 SVKTSLKNSFSMKDLGEAAYIMGIRIYRDRSKRLIGLSQST 1511
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 110 bits (276), Expect = 2e-22
Identities = 54/101 (53%), Positives = 70/101 (69%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE++K+ GF ++ +EPCVYKKI+ + GND+ +L
Sbjct: 896 LKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 955
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 956 SVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 996
>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 110 bits (276), Expect = 2e-22
Identities = 54/101 (53%), Positives = 68/101 (67%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE++K GF ++ EPCVYKKI+ + GND+ +L
Sbjct: 669 LKQASRSWNIRFDEVVKVLGFFKNEQEPCVYKKISGSALVFLILYVDDILLIGNDIPILE 728
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 729 SVKTLLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 769
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 110 bits (276), Expect = 2e-22
Identities = 54/101 (53%), Positives = 70/101 (69%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE++K+ GF ++ +EPCVYKKI+ + GND+ +L
Sbjct: 809 LKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 868
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 869 SVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 909
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 108 bits (269), Expect = 1e-21
Identities = 52/99 (52%), Positives = 67/99 (67%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWNLRF+E IK + F ++ +EPCVYKK + VA GND+ +L
Sbjct: 594 LKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQ 653
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQ 299
VK WL + F MKD+GEA+YILGIRI RDR +++ +SQ
Sbjct: 654 SVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQ 692
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 107 bits (267), Expect = 2e-21
Identities = 52/99 (52%), Positives = 66/99 (66%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE IK +GF ++ +EPCVY K++ + GND+ +L
Sbjct: 527 LKQASRSWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLVILILYVDDILLVGNDIPMLE 586
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQ 299
VK L F MKDLG+A+YILGIRI RDR KRL+ +SQ
Sbjct: 587 SVKSSLRKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQ 625
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 107 bits (267), Expect = 2e-21
Identities = 51/101 (50%), Positives = 68/101 (67%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE IK +GF ++ +EPCVY K++ + GND+ +L
Sbjct: 943 LKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYVDDILLIGNDIPMLE 1002
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
VK L F MKDLGEA+YILGI+I RDR +RL+ +SQ++
Sbjct: 1003 SVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQST 1043
>gb|ADB85411.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 566
Score = 106 bits (265), Expect = 3e-21
Identities = 51/99 (51%), Positives = 67/99 (67%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+RFDE++K + F ++ +EPCVYKK++ K+ ND+ +L
Sbjct: 408 LKQASRSWNIRFDEVVKGFDFIKNEEEPCVYKKVSGSKLVFLILYVDDILLVENDIPMLE 467
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQ 299
VK L F +KDLG+ASYILGIRI RDR KRL+ +SQ
Sbjct: 468 SVKTSLRNSFSIKDLGDASYILGIRIYRDRSKRLIGLSQ 506
>gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|41393192|gb|AAS01915.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 547
Score = 105 bits (263), Expect = 5e-21
Identities = 51/101 (50%), Positives = 68/101 (67%)
Frame = +3
Query: 3 LKQASRSWNLRFDEMIKSYGFDQSIDEPCVYKKINNGKVAXXXXXXXXXXXXGNDVEVLS 182
LKQASRSWN+ FDE++K+ GF ++ +EPCVYKKI+ + GN + +L
Sbjct: 237 LKQASRSWNIHFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNVIPMLE 296
Query: 183 EVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLAMSQAS 305
+K L F MKDLGEA+YILGIRI RDR KRL+ +SQ++
Sbjct: 297 SIKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 337