BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00035114
         (803 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]      323   5e-86
gb|AAD30190.1|AF113830_3 polyprotein P194 [Rice tungro bacillifo...   285   1e-74
gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus]                   285   1e-74
ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform v...   285   1e-74
gb|AAL55651.1|AF220561_3 P194 [Rice tungro bacilliform virus]         285   1e-74
gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacillifo...   285   2e-74
gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacillifo...   285   2e-74
dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus]...   284   2e-74
gb|AAC27711.1| polyprotein [Rice tungro bacilliform virus]            284   3e-74
emb|CAC41321.2| unnamed protein product [Rice tungro bacilliform...   278   2e-72
gb|AFQ62092.1| P194 [Rice tungro bacilliform virus]                   278   2e-72
gb|ADV58678.1| P194 [Rice tungro bacilliform virus]                   278   2e-72
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo...   274   3e-71
emb|CAE02911.3| OSJNBb0108J11.3 [Oryza sativa Japonica Group]         273   5e-71
gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subc...   272   9e-71
emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group] gi...   270   3e-70
gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]     270   3e-70
emb|CAY56550.1| P194 protein [Rice tungro bacilliform virus]          270   6e-70
tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo...   270   6e-70
gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subc...   268   1e-69

>gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
          Length = 2027

 Score =  323 bits (828), Expect = 5e-86
 Identities = 157/267 (58%), Positives = 196/267 (73%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDILVAS+ ++EH  HLE++FK I++ GIVISK+K E+ K  I+FLGL+IG G+IELQPH
Sbjct: 1074 DDILVASDTVQEHIKHLELVFKTIKEAGIVISKKKTEIAKTYINFLGLKIGKGQIELQPH 1133

Query: 183  IAEKLLNFPDKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDIN 362
            I  K L +PDK+E   ++Q+FLGLLNYARKFIPNLSKL GPLYSK  KNGQ  FN ED+ 
Sbjct: 1134 IVTKALEYPDKIENKNKLQSFLGLLNYARKFIPNLSKLVGPLYSKLRKNGQIYFNNEDVR 1193

Query: 363  LXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSSG 542
            L            PLELPL   Y +IE D S++GWGA+++ K N+Y  K+ E+I AY+SG
Sbjct: 1194 LVQKIKNEIKQLKPLELPLENYYKVIEVDSSQDGWGAILITKPNEYAEKDTEKICAYASG 1253

Query: 543  NFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTRW 722
            NF    +NWTSLD EIQ +IN++   K+YLN +FT+ TDCE IVKF+KN+NSRK N  RW
Sbjct: 1254 NFK--NNNWTSLDMEIQGVINAINTFKLYLNKKFTLRTDCENIVKFMKNENSRKHNSKRW 1311

Query: 723  VNLQNLIQGKGYTINFEHIKGKDNNLA 803
            +N QN IQG GY + FEHI GK N LA
Sbjct: 1312 LNFQNAIQGMGYVVKFEHISGKSNTLA 1338


>gb|AAD30190.1|AF113830_3 polyprotein P194 [Rice tungro bacilliform virus]
          Length = 1677

 Score =  285 bits (729), Expect = 1e-74
 Identities = 142/267 (53%), Positives = 190/267 (71%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+ASNN KEH  HL+I F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1343 DDILIASNNEKEHIEHLKIFFNRVKEIGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPH 1402

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I +K+  F  +KL   K +QA+LGLLNYAR +I NLSKL GPLY KT KNGQR FN ED 
Sbjct: 1403 IVDKIKKFDKNKLNTFKGLQAYLGLLNYARGYIKNLSKLVGPLYKKTGKNGQRIFNKEDW 1462

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PLE P  TDYIIIE D S+EGWGAV++CK +KY  K+ E+IA Y+S
Sbjct: 1463 NIIFKIEREVSKIKPLERPKETDYIIIETDASEEGWGAVLVCKPDKYSGKDTEKIAGYAS 1522

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1523 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDKDFTIRTDCEAIVKGIKTEDYKKRSKTR 1581

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1582 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1608


>gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus]
          Length = 1675

 Score =  285 bits (729), Expect = 1e-74
 Identities = 142/267 (53%), Positives = 191/267 (71%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+ASNN KEH  HL+I F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1341 DDILIASNNEKEHIEHLKIFFNRVKEVGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPH 1400

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I +K+  F  +KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT KNGQR FN ED 
Sbjct: 1401 IVDKIKKFDKNKLNTLKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKNGQRIFNKEDW 1460

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PLE P  TDYIIIE D S+EGWGAV++CK +KY  K+ E+IA Y+S
Sbjct: 1461 NIIFKIEREVSKIKPLERPKETDYIIIETDASEEGWGAVLVCKPDKYSGKDTEKIAGYAS 1520

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1521 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDKDFTIRTDCEAIVKGIKTEDYKKRSKTR 1579

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1580 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1606


>ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform virus]
            gi|130653|sp|P27502.1|POL_RTBVP RecName: Full=Polyprotein
            P3; AltName: Full=P194 protein; Contains: RecName:
            Full=Putative movement protein; Short=MP; Contains:
            RecName: Full=Capsid protein; AltName: Full=Coat protein;
            Short=CP; Contains: RecName: Full=Protease; Short=PR;
            Contains: RecName: Full=Reverse
            transcriptase/Ribonuclease H; Short=RT; AltName:
            Full=p55; Flags: Precursor gi|61913|emb|CAA40997.1| ORF
            P194 [Rice tungro bacilliform virus]
          Length = 1675

 Score =  285 bits (729), Expect = 1e-74
 Identities = 142/267 (53%), Positives = 191/267 (71%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+ASNN KEH  HL+I F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1341 DDILIASNNEKEHIEHLKIFFNRVKEVGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPH 1400

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I +K+  F  +KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT KNGQR FN ED 
Sbjct: 1401 IVDKIKKFDKNKLNTLKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKNGQRIFNKEDW 1460

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PLE P  TDYIIIE D S+EGWGAV++CK +KY  K+ E+IA Y+S
Sbjct: 1461 NIIFKIEREVSKIKPLERPKETDYIIIETDASEEGWGAVLVCKPDKYSGKDTEKIAGYAS 1520

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1521 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDKDFTIRTDCEAIVKGIKTEDYKKRSKTR 1579

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1580 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1606


>gb|AAL55651.1|AF220561_3 P194 [Rice tungro bacilliform virus]
          Length = 1677

 Score =  285 bits (729), Expect = 1e-74
 Identities = 142/267 (53%), Positives = 191/267 (71%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+ASNN KEH  HL+I F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1343 DDILIASNNEKEHIEHLKIFFNRVKEIGCVLSKKKSKMFLKEVEYLGVEIKEGKINLQPH 1402

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I +K+  F  +KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT KNGQR FN ED 
Sbjct: 1403 IVDKIKKFDKNKLNTLKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKNGQRIFNKEDW 1462

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PLE P  TDYIIIE D S+EGWGAV++CK +KY  K+ E+IA Y+S
Sbjct: 1463 NIIFKIEREVSKIKPLERPKETDYIIIETDASEEGWGAVLICKPDKYSGKDTEKIAGYAS 1522

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1523 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDKDFTIRTDCEAIVKGIKTEDYKKRSKTR 1581

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1582 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1608


>gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacilliform virus]
          Length = 1675

 Score =  285 bits (728), Expect = 2e-74
 Identities = 142/267 (53%), Positives = 191/267 (71%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+ASNN KEH  HL+I F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1341 DDILIASNNEKEHIEHLKIFFNRVKEIGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPH 1400

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I +K+  F  +KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT KNGQR FN ED 
Sbjct: 1401 IVDKIKKFDKNKLNTLKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKNGQRIFNKEDW 1460

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PLE P  TDYIIIE D S+EGWGAV++CK +KY  K+ E+IA Y+S
Sbjct: 1461 NIIFKIEREVSKIKPLERPKETDYIIIETDASEEGWGAVLVCKPDKYSGKDTEKIAGYAS 1520

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1521 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDKDFTIRTDCEAIVKGIKTEDYKKRSKTR 1579

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1580 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1606


>gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacilliform virus]
          Length = 1677

 Score =  285 bits (728), Expect = 2e-74
 Identities = 142/267 (53%), Positives = 191/267 (71%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+ASNN KEH  HL+I F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1343 DDILIASNNEKEHIEHLKIFFNRVKEIGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPH 1402

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I +K+  F  +KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT KNGQR FN ED 
Sbjct: 1403 IVDKIKKFDKNKLNTLKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKNGQRIFNKEDW 1462

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PLE P  TDYIIIE D S+EGWGAV++CK +KY  K+ E+IA Y+S
Sbjct: 1463 NIIFKIEREVSKIKPLERPKETDYIIIETDASEEGWGAVLVCKPDKYSGKDTEKIAGYAS 1522

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1523 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDKDFTIRTDCEAIVKGIKTEDYKKRSKTR 1581

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1582 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1608


>dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus]
            gi|229052|prf||1817177A capsid protein
          Length = 1675

 Score =  284 bits (727), Expect = 2e-74
 Identities = 142/267 (53%), Positives = 190/267 (71%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+ASNN KEH  HL+I F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1341 DDILIASNNEKEHIEHLKIFFNRVKEVGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPH 1400

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I  K+  F  +KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT KNGQR FN ED 
Sbjct: 1401 IVNKIKKFDKNKLNTLKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKNGQRIFNKEDW 1460

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PLE P  TDYIIIE D S+EGWGAV++CK +KY  K+ E+IA Y+S
Sbjct: 1461 NIIFKIEREVSKIKPLERPKETDYIIIETDASEEGWGAVLVCKPDKYSGKDTEKIAGYAS 1520

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1521 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDKDFTIRTDCEAIVKGIKTEDYKKRSKTR 1579

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1580 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1606


>gb|AAC27711.1| polyprotein [Rice tungro bacilliform virus]
          Length = 1675

 Score =  284 bits (726), Expect = 3e-74
 Identities = 141/267 (52%), Positives = 191/267 (71%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+AS+N +EH  HL+I F  +++ G V+SKRK ++F +++ +LG+EI +GKI LQPH
Sbjct: 1341 DDILIASSNEQEHIKHLKIFFNRVKEVGCVLSKRKSKMFLKEVEYLGVEIKEGKISLQPH 1400

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I EK+  F   KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT K+GQR+FN ED 
Sbjct: 1401 IVEKIKRFDKSKLSTLKGLQAYLGLLNYARSYIKDLSKLVGPLYKKTGKSGQRSFNKEDW 1460

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PLE P  +DYIIIE D S+EGWGAV+LCK +KY  K+ E+IA Y+S
Sbjct: 1461 NIIFKIEREISKIKPLERPKESDYIIIETDASEEGWGAVLLCKPDKYASKDTEKIAGYAS 1520

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1521 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDKDFTIRTDCEAIVKGIKTEDYKKRSKTR 1579

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1580 WIKLRDNLLKDGYKPTFEHIKGTKNFL 1606


>emb|CAC41321.2| unnamed protein product [Rice tungro bacilliform virus]
          Length = 1674

 Score =  278 bits (710), Expect = 2e-72
 Identities = 137/267 (51%), Positives = 189/267 (70%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+AS+N +EH  HL++ F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1334 DDILIASSNEQEHIKHLKLFFTRVKEVGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPH 1393

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I EK+  F   KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT K+GQR FN ED 
Sbjct: 1394 IVEKIKKFDKSKLSTLKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKSGQRTFNKEDW 1453

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PL  P  +DYIIIE D S+EGWGAV++CK +KY  K+ E+IA Y+S
Sbjct: 1454 NIIFKIEREVDKIKPLSRPEESDYIIIETDASEEGWGAVLICKPDKYASKDTEKIAGYAS 1513

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1514 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDRDFTIRTDCEAIVKGIKTEDYKKRSKTR 1572

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1573 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1599


>gb|AFQ62092.1| P194 [Rice tungro bacilliform virus]
          Length = 1674

 Score =  278 bits (710), Expect = 2e-72
 Identities = 137/267 (51%), Positives = 189/267 (70%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+AS+N +EH  HL++ F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1334 DDILIASSNEQEHIKHLKLFFTRVKEVGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPH 1393

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I EK+  F   KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT K+GQR FN ED 
Sbjct: 1394 IVEKIKKFDKSKLSTLKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKSGQRTFNKEDW 1453

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PL  P  +DYIIIE D S+EGWGAV++CK +KY  K+ E+IA Y+S
Sbjct: 1454 NIIFKIEREVDKIKPLSRPEESDYIIIETDASEEGWGAVLICKPDKYASKDTEKIAGYAS 1513

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1514 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDRDFTIRTDCEAIVKGIKTEDYKKRSKTR 1572

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1573 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1599


>gb|ADV58678.1| P194 [Rice tungro bacilliform virus]
          Length = 1674

 Score =  278 bits (710), Expect = 2e-72
 Identities = 137/267 (51%), Positives = 189/267 (70%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+AS+N +EH  HL++ F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1334 DDILIASSNEQEHIKHLKLFFTRVKEVGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPH 1393

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I EK+  F   KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT K+GQR FN ED 
Sbjct: 1394 IVEKIKKFDKSKLSTLKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKSGQRTFNKEDW 1453

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PL  P  +DYIIIE D S+EGWGAV++CK +KY  K+ E+IA Y+S
Sbjct: 1454 NIIFKIEREVDKIKPLSRPEESDYIIIETDASEEGWGAVLICKPDKYASKDTEKIAGYAS 1513

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1514 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDRDFTIRTDCEAIVKGIKTEDYKKRSKTR 1572

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1573 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1599


>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  274 bits (700), Expect = 3e-71
 Identities = 139/267 (52%), Positives = 183/267 (68%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DD+LV S   KEH  HLEI F+++E+ G+++SK+KME+ K KI+FLG EIG+GKI LQ H
Sbjct: 1442 DDLLVFSRTYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEH 1501

Query: 183  IAEKLLNFPDKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDIN 362
            IA+K+L FPD +   K++Q FLGL+NYAR  I NL+KLAGPLY+K  KNGQR FN+EDI 
Sbjct: 1502 IAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGPLYAKLRKNGQRYFNSEDIK 1561

Query: 363  LXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSSG 542
            L            PLELPL   Y IIE D S+ GWGA++  +  K+  K+EE+I  Y+SG
Sbjct: 1562 LVRLIKERVKELKPLELPLEESYFIIETDASQHGWGAILKQRPTKFSAKSEEKICRYASG 1621

Query: 543  NFGKIGSNWTSLDFEIQALINSLEKVKIYLN-NEFTVETDCEAIVKFLKNDNSRKINRTR 719
            ++     N T  D EI A+IN++   ++YL   EFTV TDCEAI ++    NS+K +  R
Sbjct: 1622 SYKLKTVNNT--DREIMAIINAINAFRLYLGFKEFTVRTDCEAICRYYNQLNSKKSSTRR 1679

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            WV  +++I G GY + FEHIKGKDNNL
Sbjct: 1680 WVLFEDIITGNGYKVIFEHIKGKDNNL 1706


>emb|CAE02911.3| OSJNBb0108J11.3 [Oryza sativa Japonica Group]
          Length = 968

 Score =  273 bits (698), Expect = 5e-71
 Identities = 138/267 (51%), Positives = 183/267 (68%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DD+LV S   KEH  HLEI F+++E+ G+++SK+KME+ K KI+FLG EIG+GKI LQ H
Sbjct: 687  DDLLVFSRTYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEH 746

Query: 183  IAEKLLNFPDKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDIN 362
            IA+K+L FPD +   K++Q FLGL+NYAR  I NL+K+AGPLY+K  KNGQR FN+EDI 
Sbjct: 747  IAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKIAGPLYAKLRKNGQRYFNSEDIK 806

Query: 363  LXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSSG 542
            L            PLELPL   Y IIE D S+ GWGA++  +  K+  K+EE+I  Y+SG
Sbjct: 807  LVRLIKERVKELKPLELPLEESYFIIETDASQHGWGAILKQRPTKFSAKSEEKICRYASG 866

Query: 543  NFGKIGSNWTSLDFEIQALINSLEKVKIYLN-NEFTVETDCEAIVKFLKNDNSRKINRTR 719
            ++     N T  D EI A+IN++   ++YL   EFTV TDCEAI ++    NS+K +  R
Sbjct: 867  SYKLKTVNNT--DREIMAIINAINAFRLYLGFKEFTVRTDCEAICRYYNQLNSKKSSTRR 924

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            WV  +++I G GY + FEHIKGKDNNL
Sbjct: 925  WVLFEDIITGNGYKVIFEHIKGKDNNL 951


>gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 730

 Score =  272 bits (696), Expect = 9e-71
 Identities = 138/267 (51%), Positives = 183/267 (68%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DD+LV S   KEH  HLEI F+++E+ G+++SK+KME+ K KI+FLG EIG+GKI LQ H
Sbjct: 275  DDLLVFSRTYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEH 334

Query: 183  IAEKLLNFPDKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDIN 362
            IA+K+L FPD +   K++Q FLGL+NYAR +I NL+KLAGPLY+K  KN QR FN+EDI 
Sbjct: 335  IAKKILQFPDAMNDKKKLQQFLGLVNYARNYINNLAKLAGPLYAKLRKNSQRYFNSEDIK 394

Query: 363  LXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSSG 542
            L            PLELPL   Y IIE D S+ GWGA++  +  K+  K+EE+I  Y+SG
Sbjct: 395  LVRLIKEKVKELKPLELPLEESYFIIETDASQYGWGAILKQRPTKFSAKSEEKICRYASG 454

Query: 543  NFGKIGSNWTSLDFEIQALINSLEKVKIYLN-NEFTVETDCEAIVKFLKNDNSRKINRTR 719
            ++     N T  D EI A+IN++   ++YL   EFTV TDCEAI ++    NS+K +  R
Sbjct: 455  SYKLKTVNNT--DREIMAIINAINAFRLYLGFKEFTVRTDCEAICRYYNQLNSKKSSTRR 512

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            WV  +++I G GY + FEHIKGKDNNL
Sbjct: 513  WVLFEDIITGNGYKVIFEHIKGKDNNL 539


>emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group]
            gi|116310779|emb|CAH67571.1| H0315A08.1 [Oryza sativa
            Indica Group]
          Length = 685

 Score =  270 bits (691), Expect = 3e-70
 Identities = 138/267 (51%), Positives = 182/267 (68%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DD+LV S   KEH  HLEI  +++E+ G+++SK+KME+ K KI+FLG EIG+GKI LQ H
Sbjct: 337  DDLLVFSRTYKEHIAHLEIFIRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEH 396

Query: 183  IAEKLLNFPDKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDIN 362
            IA+K+L FPD +   K++Q FLGL+NYAR  I NL+KLAGPLY+K  KNGQR FN+EDI 
Sbjct: 397  IAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGPLYAKLRKNGQRYFNSEDIK 456

Query: 363  LXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSSG 542
            L            PLELPL   Y IIE D S+ GWGA++  +  K+  K+EE+I  Y+SG
Sbjct: 457  LVRLIKERVKELKPLELPLEESYFIIETDASQHGWGAILKQRPTKFSAKSEEKICRYASG 516

Query: 543  NFGKIGSNWTSLDFEIQALINSLEKVKIYLN-NEFTVETDCEAIVKFLKNDNSRKINRTR 719
            ++     N T  D EI A+IN++   ++YL   EFTV TDCEAI ++    NS+K +  R
Sbjct: 517  SYKLKTVNNT--DREIMAIINAINAFRLYLGFKEFTVITDCEAICRYYNQLNSKKSSTRR 574

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            WV  +++I G GY + FEHIKGKDNNL
Sbjct: 575  WVLFEDIITGNGYKVIFEHIKGKDNNL 601


>gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1326

 Score =  270 bits (691), Expect = 3e-70
 Identities = 138/267 (51%), Positives = 182/267 (68%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            +D+LV S   KEH  HLEI F+++E+ G+++SK+KME+ K KI+FLG EI +GKI LQ H
Sbjct: 1017 NDLLVFSRTYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIREGKIHLQEH 1076

Query: 183  IAEKLLNFPDKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDIN 362
            IA+K+L FPD +   KQ+Q FLGL+NYAR  I NL+KLAGPLY+K  KNGQR FN+EDI 
Sbjct: 1077 IAKKILQFPDAINDKKQLQQFLGLVNYARNHINNLAKLAGPLYAKLRKNGQRYFNSEDIK 1136

Query: 363  LXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSSG 542
            L            PLELPL   Y IIE D S+ GWGA++  +  K+  K+EE+I  Y+SG
Sbjct: 1137 LVILIKERVKELKPLELPLEESYFIIETDASQHGWGAILKQRPTKFSAKSEEKICRYASG 1196

Query: 543  NFGKIGSNWTSLDFEIQALINSLEKVKIYLN-NEFTVETDCEAIVKFLKNDNSRKINRTR 719
            ++     N T  D EI A+IN++   ++YL   EFTV TDCEAI ++    NS+K +  R
Sbjct: 1197 SYKLKTVNNT--DREIMAIINAINAFRLYLGFKEFTVRTDCEAICRYYNQLNSKKSSTRR 1254

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            WV  +++I G GY + FEHIKGKDNNL
Sbjct: 1255 WVLFEDIITGNGYKVIFEHIKGKDNNL 1281


>emb|CAY56550.1| P194 protein [Rice tungro bacilliform virus]
          Length = 1674

 Score =  270 bits (689), Expect = 6e-70
 Identities = 135/267 (50%), Positives = 187/267 (70%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DDIL+AS+N +EH  HL++ F  +++ G V+SK+K ++F +++ +LG+EI +GKI LQPH
Sbjct: 1334 DDILIASSNEQEHIKHLKLFFTRVKEVGCVLSKKKSKMFLKEVEYLGVEIKEGKISLQPH 1393

Query: 183  IAEKLLNFP-DKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDI 359
            I EK+  F   KL  LK +QA+LGLLNYAR +I +LSKL GPLY KT K+GQR FN ED 
Sbjct: 1394 IVEKIKKFDKSKLSTLKGLQAYLGLLNYARGYIKDLSKLVGPLYKKTGKSGQRTFNKEDW 1453

Query: 360  NLXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSS 539
            N+            PL  P  +DYIIIE D S+E  GAV++CK +KY  K+ E+IA Y+S
Sbjct: 1454 NIIFKIEREVDKIKPLNRPEESDYIIIETDASEEEGGAVLICKPDKYASKDTEKIAGYAS 1513

Query: 540  GNFGKIGSNWTSLDFEIQALINSLEKVKIYLNNEFTVETDCEAIVKFLKNDNSRKINRTR 719
            GNFG+    WTSLD+EI+A+  +L K +IYL+ +FT+ TDCEAIVK +K ++ +K ++TR
Sbjct: 1514 GNFGE-KKTWTSLDYEIEAINEALNKFQIYLDRDFTIRTDCEAIVKGIKTEDYKKRSKTR 1572

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+ L++ +   GY   FEHIKG  N L
Sbjct: 1573 WIKLRDNLLKDGYKPTFEHIKGNKNFL 1599


>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  270 bits (689), Expect = 6e-70
 Identities = 137/269 (50%), Positives = 184/269 (68%), Gaps = 3/269 (1%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DD+LV S   KEH  HLEI F+++E+ G+++SK+KME+ K KI+FLG EIG+GKI LQ H
Sbjct: 1442 DDLLVFSRTYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEH 1501

Query: 183  IAEKLLNFPDKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDIN 362
            IA+K+L FPD +   K++Q FLGL+NYAR  I NL+KLAGPLY+K  KNGQR FN+EDI 
Sbjct: 1502 IAKKILEFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGPLYAKLRKNGQRYFNSEDIK 1561

Query: 363  LXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSSG 542
            L            PLELPL   Y IIE D S+ GWGAV+  +  KY  K+EE++  Y+SG
Sbjct: 1562 LVRLIKERVKELKPLELPLEESYFIIETDASQLGWGAVLKQRPTKYSSKSEEKVCRYASG 1621

Query: 543  NF--GKIGSNWTSLDFEIQALINSLEKVKIYLN-NEFTVETDCEAIVKFLKNDNSRKINR 713
            ++    +G+     D EI A+IN++   ++YL   EFTV TDCEAI ++    NS+K + 
Sbjct: 1622 SYKLKTVGNT----DREILAIINAINAFRLYLGFKEFTVRTDCEAICRYYNQLNSKKSST 1677

Query: 714  TRWVNLQNLIQGKGYTINFEHIKGKDNNL 800
             RW+  +++I G GY + FEHIKGKDN+L
Sbjct: 1678 RRWILFEDIITGNGYKVIFEHIKGKDNHL 1706


>gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 792

 Score =  268 bits (686), Expect = 1e-69
 Identities = 132/267 (49%), Positives = 184/267 (68%), Gaps = 1/267 (0%)
 Frame = +3

Query: 3    DDILVASNNIKEHEYHLEIIFKEIEKQGIVISKRKMELFKRKISFLGLEIGDGKIELQPH 182
            DD+L+ S   K+H  HLE+ F+++E+ G+++SK+KME+ K K++FLG EIG+GKI LQ H
Sbjct: 337  DDLLIFSKTYKDHIAHLELFFRKVEQNGLILSKKKMEICKEKVNFLGHEIGEGKIHLQEH 396

Query: 183  IAEKLLNFPDKLEGLKQIQAFLGLLNYARKFIPNLSKLAGPLYSKTTKNGQRNFNTEDIN 362
            IA+K+L FPD +   K++Q FLGL+NYAR  I NL+KLAGPLY+K  KNGQ+ FN+EDI 
Sbjct: 397  IAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGPLYAKLRKNGQKYFNSEDIK 456

Query: 363  LXXXXXXXXXXXXPLELPLVTDYIIIECDGSKEGWGAVMLCKKNKYCPKNEERIAAYSSG 542
            L            PLELPL   Y IIE D S++GWGA++  +  K+  K+EE+I  Y+SG
Sbjct: 457  LVRLIKEKVKELKPLELPLEESYFIIETDASQQGWGAILKQRPTKFSAKSEEKICRYASG 516

Query: 543  NFGKIGSNWTSLDFEIQALINSLEKVKIYLN-NEFTVETDCEAIVKFLKNDNSRKINRTR 719
            ++     N T  D EI A+IN++   ++YL   EFTV TDCEAI ++    NS+K +  R
Sbjct: 517  SYKLKTVNNT--DREIMAIINAINAFRLYLGFKEFTVRTDCEAICRYYNQLNSKKSSTRR 574

Query: 720  WVNLQNLIQGKGYTINFEHIKGKDNNL 800
            W+  +++I G GY + FEHIKGKDN+L
Sbjct: 575  WILFEDIITGNGYRVIFEHIKGKDNSL 601