BLASTX nr result
ID: Mentha29_contig00034828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00034828
(656 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU19571.1| hypothetical protein MIMGU_mgv1a008219mg [Mimulus... 93 8e-17
ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II tra... 90 5e-16
ref|XP_004234430.1| PREDICTED: mediator of RNA polymerase II tra... 90 5e-16
dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum] 90 5e-16
emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana] 90 7e-16
emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana] 90 7e-16
ref|XP_002513667.1| fibrillarin, putative [Ricinus communis] gi|... 89 1e-15
ref|XP_006437602.1| hypothetical protein CICLE_v10032221mg [Citr... 85 1e-15
ref|XP_006437600.1| hypothetical protein CICLE_v10032221mg [Citr... 85 1e-15
ref|XP_006437601.1| hypothetical protein CICLE_v10032221mg [Citr... 85 1e-15
ref|XP_006401820.1| hypothetical protein EUTSA_v10015801mg, part... 88 2e-15
ref|XP_006284136.1| hypothetical protein CARUB_v10005269mg [Caps... 88 2e-15
ref|XP_006280722.1| hypothetical protein CARUB_v10026686mg [Caps... 88 2e-15
ref|NP_568772.3| probable mediator of RNA polymerase II transcri... 88 2e-15
ref|XP_002869663.1| hypothetical protein ARALYDRAFT_492264 [Arab... 88 2e-15
ref|NP_001119418.1| probable mediator of RNA polymerase II trans... 88 2e-15
ref|XP_003537503.1| PREDICTED: mediator of RNA polymerase II tra... 85 2e-15
ref|XP_007200465.1| hypothetical protein PRUPE_ppa009013mg [Prun... 88 3e-15
ref|XP_007200358.1| hypothetical protein PRUPE_ppa010543mg [Prun... 88 3e-15
ref|XP_002864176.1| hypothetical protein ARALYDRAFT_495317 [Arab... 88 3e-15
>gb|EYU19571.1| hypothetical protein MIMGU_mgv1a008219mg [Mimulus guttatus]
Length = 381
Score = 92.8 bits (229), Expect = 8e-17
Identities = 46/58 (79%), Positives = 49/58 (84%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDALCTKNMVPG A YNEK +SVQNEDGTKVEY +WNP R KLAAAIL DNIWI
Sbjct: 160 GKEDALCTKNMVPGEAVYNEKRVSVQNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWI 217
>ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Solanum tuberosum]
Length = 314
Score = 90.1 bits (222), Expect = 5e-16
Identities = 45/58 (77%), Positives = 49/58 (84%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDALCTKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAAIL D+IWI
Sbjct: 91 GKEDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDDIWI 148
>ref|XP_004234430.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Solanum lycopersicum]
Length = 314
Score = 90.1 bits (222), Expect = 5e-16
Identities = 45/58 (77%), Positives = 49/58 (84%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDALCTKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAAIL D+IWI
Sbjct: 91 GKEDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDDIWI 148
>dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
Length = 314
Score = 90.1 bits (222), Expect = 5e-16
Identities = 45/58 (77%), Positives = 49/58 (84%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDALCTKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAAIL D+IWI
Sbjct: 91 GKEDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDDIWI 148
>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
Length = 314
Score = 89.7 bits (221), Expect = 7e-16
Identities = 44/58 (75%), Positives = 49/58 (84%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDALCTKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAA+L D+IWI
Sbjct: 91 GKEDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI 148
>emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]
Length = 314
Score = 89.7 bits (221), Expect = 7e-16
Identities = 44/58 (75%), Positives = 49/58 (84%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDALCTKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAA+L D+IWI
Sbjct: 91 GKEDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI 148
>ref|XP_002513667.1| fibrillarin, putative [Ricinus communis]
gi|223547575|gb|EEF49070.1| fibrillarin, putative
[Ricinus communis]
Length = 247
Score = 89.0 bits (219), Expect = 1e-15
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 6/68 (8%)
Frame = +1
Query: 313 RNEG---RK*GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL 483
R+EG K G+EDAL TKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAAIL
Sbjct: 13 RHEGVFIGKGGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAIL 72
Query: 484 ---DNIWI 498
DNIWI
Sbjct: 73 GGVDNIWI 80
>ref|XP_006437602.1| hypothetical protein CICLE_v10032221mg [Citrus clementina]
gi|557539798|gb|ESR50842.1| hypothetical protein
CICLE_v10032221mg [Citrus clementina]
Length = 305
Score = 85.1 bits (209), Expect(2) = 1e-15
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+V G A YNEK ISVQNEDGTKVEY IWNP R KLAAA+L DNIWI
Sbjct: 84 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWI 141
Score = 24.3 bits (51), Expect(2) = 1e-15
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 9/29 (31%)
Frame = +2
Query: 596 NLITKPVARVLFLG---------VSDIVG 655
N+ KP ARVL+LG VSDIVG
Sbjct: 138 NIWIKPGARVLYLGAASGTTVSHVSDIVG 166
>ref|XP_006437600.1| hypothetical protein CICLE_v10032221mg [Citrus clementina]
gi|557539796|gb|ESR50840.1| hypothetical protein
CICLE_v10032221mg [Citrus clementina]
Length = 226
Score = 85.1 bits (209), Expect(2) = 1e-15
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+V G A YNEK ISVQNEDGTKVEY IWNP R KLAAA+L DNIWI
Sbjct: 44 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWI 101
Score = 24.3 bits (51), Expect(2) = 1e-15
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 9/29 (31%)
Frame = +2
Query: 596 NLITKPVARVLFLG---------VSDIVG 655
N+ KP ARVL+LG VSDIVG
Sbjct: 98 NIWIKPGARVLYLGAASGTTVSHVSDIVG 126
>ref|XP_006437601.1| hypothetical protein CICLE_v10032221mg [Citrus clementina]
gi|557539797|gb|ESR50841.1| hypothetical protein
CICLE_v10032221mg [Citrus clementina]
Length = 206
Score = 85.1 bits (209), Expect(2) = 1e-15
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+V G A YNEK ISVQNEDGTKVEY IWNP R KLAAA+L DNIWI
Sbjct: 44 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWI 101
Score = 24.3 bits (51), Expect(2) = 1e-15
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 9/29 (31%)
Frame = +2
Query: 596 NLITKPVARVLFLG---------VSDIVG 655
N+ KP ARVL+LG VSDIVG
Sbjct: 98 NIWIKPGARVLYLGAASGTTVSHVSDIVG 126
>ref|XP_006401820.1| hypothetical protein EUTSA_v10015801mg, partial [Eutrema
salsugineum] gi|557102910|gb|ESQ43273.1| hypothetical
protein EUTSA_v10015801mg, partial [Eutrema salsugineum]
Length = 422
Score = 88.2 bits (217), Expect = 2e-15
Identities = 45/58 (77%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAAIL DNIWI
Sbjct: 198 GKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWI 255
>ref|XP_006284136.1| hypothetical protein CARUB_v10005269mg [Capsella rubella]
gi|482552841|gb|EOA17034.1| hypothetical protein
CARUB_v10005269mg [Capsella rubella]
Length = 318
Score = 88.2 bits (217), Expect = 2e-15
Identities = 45/58 (77%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAAIL DNIWI
Sbjct: 93 GKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWI 150
>ref|XP_006280722.1| hypothetical protein CARUB_v10026686mg [Capsella rubella]
gi|482549426|gb|EOA13620.1| hypothetical protein
CARUB_v10026686mg [Capsella rubella]
Length = 353
Score = 88.2 bits (217), Expect = 2e-15
Identities = 45/58 (77%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAAIL DNIWI
Sbjct: 129 GKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWI 186
>ref|NP_568772.3| probable mediator of RNA polymerase II transcription subunit 36b
[Arabidopsis thaliana]
gi|67461076|sp|Q9FEF8.1|MD36B_ARATH RecName:
Full=Probable mediator of RNA polymerase II
transcription subunit 36b; AltName:
Full=Histone-glutamine methyltransferase; AltName:
Full=SKP1-interacting partner 7; AltName: Full=rRNA
2'-O-methyltransferase fibrillarin 1
gi|9965653|gb|AAG10103.1|AF233443_1 fibrillarin 1
[Arabidopsis thaliana] gi|9965751|gb|AAG10152.1|
fibrillarin 1 [Arabidopsis thaliana]
gi|10177413|dbj|BAB10544.1| fibrillarin-like
[Arabidopsis thaliana] gi|22654993|gb|AAM98088.1|
AT5g52470/K24M7_22 [Arabidopsis thaliana]
gi|28416513|gb|AAO42787.1| AT5g52470/K24M7_22
[Arabidopsis thaliana] gi|110740295|dbj|BAF02044.1|
fibrillarin homolog [Arabidopsis thaliana]
gi|332008834|gb|AED96217.1| probable mediator of RNA
polymerase II transcription subunit 36b [Arabidopsis
thaliana]
Length = 308
Score = 88.2 bits (217), Expect = 2e-15
Identities = 45/58 (77%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAAIL DNIWI
Sbjct: 84 GKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWI 141
>ref|XP_002869663.1| hypothetical protein ARALYDRAFT_492264 [Arabidopsis lyrata subsp.
lyrata] gi|297315499|gb|EFH45922.1| hypothetical protein
ARALYDRAFT_492264 [Arabidopsis lyrata subsp. lyrata]
Length = 317
Score = 88.2 bits (217), Expect = 2e-15
Identities = 45/58 (77%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAAIL DNIWI
Sbjct: 92 GKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWI 149
>ref|NP_001119418.1| probable mediator of RNA polymerase II transcription subunit 36b
[Arabidopsis thaliana] gi|332008835|gb|AED96218.1|
probable mediator of RNA polymerase II transcription
subunit 36b [Arabidopsis thaliana]
Length = 273
Score = 88.2 bits (217), Expect = 2e-15
Identities = 45/58 (77%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+VPG A YNEK ISVQNEDGTKVEY +WNP R KLAAAIL DNIWI
Sbjct: 84 GKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWI 141
>ref|XP_003537503.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Glycine max]
Length = 315
Score = 84.7 bits (208), Expect(2) = 2e-15
Identities = 43/58 (74%), Positives = 47/58 (81%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+VPG A YNEK I+VQNEDGTK EY +WNP R KLAAAIL DNIWI
Sbjct: 91 GKEDALVTKNLVPGEAVYNEKRITVQNEDGTKEEYRVWNPFRSKLAAAILGGVDNIWI 148
Score = 23.9 bits (50), Expect(2) = 2e-15
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 9/29 (31%)
Frame = +2
Query: 596 NLITKPVARVLFLG---------VSDIVG 655
N+ KP ARVL+LG VSD+VG
Sbjct: 145 NIWIKPGARVLYLGAASGTTVSHVSDVVG 173
>ref|XP_007200465.1| hypothetical protein PRUPE_ppa009013mg [Prunus persica]
gi|462395865|gb|EMJ01664.1| hypothetical protein
PRUPE_ppa009013mg [Prunus persica]
Length = 310
Score = 87.8 bits (216), Expect = 3e-15
Identities = 46/58 (79%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKNMVPG A YNEK ISVQNEDGTKVEY IWNP R KLAAAIL D+IWI
Sbjct: 87 GKEDALVTKNMVPGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAILGGVDDIWI 144
>ref|XP_007200358.1| hypothetical protein PRUPE_ppa010543mg [Prunus persica]
gi|462395758|gb|EMJ01557.1| hypothetical protein
PRUPE_ppa010543mg [Prunus persica]
Length = 245
Score = 87.8 bits (216), Expect = 3e-15
Identities = 46/58 (79%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKNMVPG A YNEK ISVQNEDGTKVEY IWNP R KLAAAIL D+IWI
Sbjct: 22 GKEDALVTKNMVPGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAILGGVDDIWI 79
>ref|XP_002864176.1| hypothetical protein ARALYDRAFT_495317 [Arabidopsis lyrata subsp.
lyrata] gi|297310011|gb|EFH40435.1| hypothetical protein
ARALYDRAFT_495317 [Arabidopsis lyrata subsp. lyrata]
Length = 307
Score = 87.8 bits (216), Expect = 3e-15
Identities = 44/58 (75%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 GREDALCTKNMVPGVAGYNEK*ISVQNEDGTKVEYGIWNPSRIKLAAAIL---DNIWI 498
G+EDAL TKN+VPG A YNEK ISVQNEDGTK+EY +WNP R KLAAAIL DNIWI
Sbjct: 83 GKEDALVTKNLVPGEAVYNEKRISVQNEDGTKIEYRVWNPFRSKLAAAILGGVDNIWI 140