BLASTX nr result
ID: Mentha29_contig00034318
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00034318
(500 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 238 7e-61
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 224 1e-56
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 204 1e-50
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 192 3e-47
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 189 3e-46
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 186 3e-45
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 184 9e-45
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 183 2e-44
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 183 2e-44
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 180 2e-43
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 179 5e-43
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 178 8e-43
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 177 1e-42
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 176 3e-42
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg... 174 1e-41
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 168 8e-40
gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana] 162 6e-38
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 162 6e-38
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 158 9e-37
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 158 9e-37
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 238 bits (607), Expect = 7e-61
Identities = 106/165 (64%), Positives = 137/165 (83%)
Frame = -2
Query: 496 YRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNIK 317
+RPIACC+++YKIISK+L +R++ VL ++S+NQSAFVKGR I DNI+LSHELVK Y+ K
Sbjct: 197 FRPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRK 256
Query: 316 HISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEITK 137
ISPRCMVKID QK Y+SVEWPF+++L+LELGF + F W+M C+TT SY+ +NG++T+
Sbjct: 257 GISPRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDLTR 316
Query: 136 AFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F AKKGLRQGD ISPYLFVICMEYL+ CL+ L+ F+FHP+C
Sbjct: 317 PFAAKKGLRQGDPISPYLFVICMEYLNICLIQLRKNAAFRFHPRC 361
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 224 bits (570), Expect = 1e-56
Identities = 100/166 (60%), Positives = 130/166 (78%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
E+RPIACCT++YKIISK+L NR+K ++G+++++ QS F+ GR I DNILL+ EL++GY
Sbjct: 513 EFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTR 572
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
KH+SPRC++K+D +K YDSVEW FL LL E GFP F WIM C++TVSYSV VNG T
Sbjct: 573 KHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPT 632
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
+ F A+KGLRQGD +SP+LF +CMEYL +CL LK +F FHPKC
Sbjct: 633 QPFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKC 678
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 204 bits (519), Expect = 1e-50
Identities = 92/166 (55%), Positives = 125/166 (75%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPIACC+ LYKIISK+L RL+ V+ +++ Q+ F+ R I DNILL+ EL++GYN
Sbjct: 516 DYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNR 575
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
+H+SPRC++K+D +K YDSVEW FL +L ELGFP +F +WIMAC+ TVSYS+ +NG +
Sbjct: 576 RHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPS 635
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F A+KGLRQGD +SP+LF + MEYL +C+ + EF FHPKC
Sbjct: 636 IPFDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKC 681
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 192 bits (489), Expect = 3e-47
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC +LYK+ISK++ANRLKLVL I+ NQSAFVK R +++N+LL+ ELVK Y+
Sbjct: 528 DYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHK 587
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
IS RC +KID K +DSV+WPFL + LGFP F WI CITT S+SV VNGE+
Sbjct: 588 DTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELA 647
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F + +GLRQG +SPYLFVICM+ L K L + R F +HPKC
Sbjct: 648 GYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKC 693
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 189 bits (481), Expect = 3e-46
Identities = 91/166 (54%), Positives = 119/166 (71%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC +LYK+ISK++ANRLKL+L I++NQSAFVK R +++N+LL+ ELVK Y+
Sbjct: 175 DYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHK 234
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
IS RC +KID K +DSV+W FL L+ + F F WI CITT S+SV VNG++
Sbjct: 235 DSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLV 294
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F +K+GLRQG +SPYLFVICM+ L K L R+F FHPKC
Sbjct: 295 GYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKC 340
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 186 bits (472), Expect = 3e-45
Identities = 89/166 (53%), Positives = 119/166 (71%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC +LYK+ISK++ANRLK VL I+ NQSAF+K R +++N+LL+ ELVK Y+
Sbjct: 46 DYRPISCCNVLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDYHK 105
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
+S RC +KID K +DSV+W FLR +LL L FP F WIM C+TT S+SV VN E+
Sbjct: 106 DSVSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLCVTTASFSVQVNRELA 165
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F++ +GLRQG ++PYLFVI M+ L K L R+F +HPKC
Sbjct: 166 GYFNSLRGLRQGCSLTPYLFVIVMDVLSKKLDRAAGLRKFGYHPKC 211
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 184 bits (468), Expect = 9e-45
Identities = 85/165 (51%), Positives = 121/165 (73%)
Frame = -2
Query: 496 YRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNIK 317
YRP++CC ++YKIISK++ANRLK+VL I+ NQ+AFVK R +++N+LL+ ELVK Y+ +
Sbjct: 56 YRPLSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKE 115
Query: 316 HISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEITK 137
+S RC +KID K ++SV+W F+R +LL + FP F WIM CI+T S+SV VNGE+
Sbjct: 116 SVSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVG 175
Query: 136 AFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F +K+GLRQG +SPYLFV+ M+ L K L S ++F +H +C
Sbjct: 176 FFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRC 220
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 183 bits (465), Expect = 2e-44
Identities = 90/168 (53%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVL---ANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKG 329
++R C TI+ + I + L N V+ IISD+Q+ F+ GR I DNI+L+HELVK
Sbjct: 318 QHRIQLCATIIEQEIIEALKSIGNDKAPVIHTIISDSQAGFIPGRKIGDNIILAHELVKA 377
Query: 328 YNIKHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNG 149
Y K++SPRCM+KID K YDSVEWPFL ++ LGFP LF KW+M C+ TV+Y++ VNG
Sbjct: 378 YTRKNVSPRCMLKIDLHKAYDSVEWPFLEQVMEGLGFPDLFTKWVMKCVKTVNYTIVVNG 437
Query: 148 EITKAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPK 5
+ T+ F A KGLRQGD +SP+LF I MEYL + L GLK + FK+HPK
Sbjct: 438 QNTQRFDAAKGLRQGDPMSPFLFAIAMEYLSRLLKGLKEDKSFKYHPK 485
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 183 bits (465), Expect = 2e-44
Identities = 87/166 (52%), Positives = 116/166 (69%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC +LYK+ISK+LANRLKL+L I NQSAFVK R +++N+LL+ ELVK Y+
Sbjct: 825 DYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHK 884
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
+ ++PRC +KID K +DSV+W FL L L FP F+ WI CI+T ++SV VNGE+
Sbjct: 885 ESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELA 944
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F + +GLRQG +SPYLFVICM L + +R +HPKC
Sbjct: 945 GFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKC 990
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 180 bits (456), Expect = 2e-43
Identities = 88/166 (53%), Positives = 115/166 (69%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC +LYK+ISK++ANRLKLVL I NQSAFVK R +++N+LL+ E+VK Y+
Sbjct: 416 DYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHK 475
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
+S RC +KID K +DSV+W FL +L + FP F WI CITT S+SV VNGE+
Sbjct: 476 DSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELA 535
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F + + LRQG +SPYLFVI M+ L K L R+F +HPKC
Sbjct: 536 GVFSSARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKC 581
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 179 bits (453), Expect = 5e-43
Identities = 86/166 (51%), Positives = 115/166 (69%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC ++YK+ISK++ANRLK++L I NQSAFV+ R +++N+LL+ ELVK Y+
Sbjct: 101 DYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHK 160
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
ISPRC +KID K +DSV+W FL L L FP F WI CI+T ++SV VNGE+
Sbjct: 161 DSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELA 220
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F +K+GLRQG +SPYLFVICM L + +R +HPKC
Sbjct: 221 GFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKC 266
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 178 bits (451), Expect = 8e-43
Identities = 85/166 (51%), Positives = 115/166 (69%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC +LYK ISK+LANRLK +L I NQSAFVK R +++N+LL+ ELVK Y+
Sbjct: 249 DYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHK 308
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
IS RC +KID K +DS++W FL ++L + FP F WI C++T S+S+ VNGE+
Sbjct: 309 DSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELA 368
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F + +GLRQG +SPYLFVI M+ L + L REF +HP+C
Sbjct: 369 GYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRC 414
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 177 bits (450), Expect = 1e-42
Identities = 86/166 (51%), Positives = 114/166 (68%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC ++YK+ISK+LANRLKL+L I+ NQS+FVK R +++N+LL+ +LVK Y+
Sbjct: 81 DYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHK 140
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
IS RC +KID K DSV+W FL L + FP +F WI CITT S+SV VNGE+
Sbjct: 141 DSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELA 200
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F + +GLRQG +SPYLFVICM+ L K L + +HP C
Sbjct: 201 GFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHC 246
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 176 bits (446), Expect = 3e-42
Identities = 85/166 (51%), Positives = 114/166 (68%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC ++YK+ISK++ANRLK++L I NQSAFV+ R +++N+LL+ ELVK Y+
Sbjct: 670 DYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHK 729
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
ISPRC +KID K +DSV+W FL L L FP F+ WI CI+T ++SV VN E
Sbjct: 730 DSISPRCAMKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIKLCISTATFSVQVNSEQA 789
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F +K+GLRQG +SPYLFVICM L + +R +HPKC
Sbjct: 790 GFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKC 835
>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
gi|346683183|ref|YP_004842114.1| hypothetical protein
BemaM_p069 [Beta macrocarpa]
gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
hypothetical protein [Beta macrocarpa]
Length = 238
Score = 174 bits (441), Expect = 1e-41
Identities = 78/144 (54%), Positives = 109/144 (75%)
Frame = -2
Query: 433 LKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNIKHISPRCMVKIDTQKGYDSVEW 254
+ +V+G++I++ Q+ F+ G+ I DNILL+ EL+KGY+ K +SPRCM+K+D +K YDS+EW
Sbjct: 1 MAVVIGEVINEAQAGFIPGKHIGDNILLATELIKGYSQKAVSPRCMIKVDLRKAYDSIEW 60
Query: 253 PFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEITKAFHAKKGLRQGDHISPYLFVI 74
FL+ +L ELGFP F WIM C+TTVSYS+ +NG+ T F +KKG+RQGD +SP+LF I
Sbjct: 61 SFLQCMLSELGFPSQFITWIMECVTTVSYSILLNGKPTTPFPSKKGVRQGDPMSPFLFAI 120
Query: 73 CMEYLHKCLLGLKSYREFKFHPKC 2
MEYL +CLL L F +HP+C
Sbjct: 121 GMEYLSRCLLELTLNPNFNYHPRC 144
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 168 bits (425), Expect = 8e-40
Identities = 81/166 (48%), Positives = 115/166 (69%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC +LYKI+SK++ANRLK +L I+ NQSAF+K R +++N+LL+ ELVK Y+
Sbjct: 675 DYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDYHK 734
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
+ IS R +KID K +D V+WPFL +L + P +F WI CI T S+SV VNGE++
Sbjct: 735 ESISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELS 794
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F +++GLRQG +SPYL+VICM L L ++ +HP+C
Sbjct: 795 GFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRC 840
>gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana]
Length = 458
Score = 162 bits (409), Expect = 6e-38
Identities = 78/168 (46%), Positives = 114/168 (67%), Gaps = 2/168 (1%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC +++K+I K++AN LK VL + + NQSAFV+ R +++N+LL+ ELVK Y+
Sbjct: 269 DYRPISCCNVIFKVILKIIANPLKRVLPNFVVGNQSAFVQDRLLIENVLLATELVKDYHK 328
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
+ +S C +KID K +DSV+W LR +L + FP F WIM C+TT S+SV VNGE+
Sbjct: 329 ESVSTGCAIKIDISKAFDSVQWSVLRKVLEAMKFPLFFIHWIMLCVTTTSFSVQVNGELV 388
Query: 139 KAFHAKKGLRQ--GDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
F++ +GLRQ +S YLFV+ M+ L K L R+F +HP+C
Sbjct: 389 GYFNSVRGLRQRCSLSLSLYLFVVSMDVLSKLLDKAVGLRKFGYHPRC 436
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 162 bits (409), Expect = 6e-38
Identities = 83/166 (50%), Positives = 107/166 (64%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
+YRPI+CC +LYK ISK+LANRLK +L + I+ NQSAF+ R +++N+LL+ ELVK Y+
Sbjct: 794 DYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHK 853
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
+SPRC +KID K +DSV+WPFL L L P F WI CI+T S+SV VN
Sbjct: 854 DGLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVN---- 909
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPKC 2
GLRQG +SPYLFVICM L L + F +HP+C
Sbjct: 910 -------GLRQGCSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRC 948
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 158 bits (399), Expect = 9e-37
Identities = 78/165 (47%), Positives = 108/165 (65%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
E+RPI+C LYK+ISK+L +RL+ +L +I +QSAF+ GRS+ +N+LL+ E+V GYN
Sbjct: 382 EFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNR 441
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
+ISPR M+K+D +K +DSV+W F+ L L P + WI CITT S+++ VNG
Sbjct: 442 LNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATG 501
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPK 5
F + KGLRQGD +SPYLFV+ ME K L +HPK
Sbjct: 502 GFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPK 546
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 158 bits (399), Expect = 9e-37
Identities = 78/165 (47%), Positives = 108/165 (65%)
Frame = -2
Query: 499 EYRPIACCTILYKIISKVLANRLKLVLGDIISDNQSAFVKGRSILDNILLSHELVKGYNI 320
E+RPI+C LYK+ISK+L +RL+ +L +I +QSAF+ GRS+ +N+LL+ E+V GYN
Sbjct: 382 EFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNR 441
Query: 319 KHISPRCMVKIDTQKGYDSVEWPFLRYLLLELGFPFLFKKWIMACITTVSYSVCVNGEIT 140
+ISPR M+K+D +K +DSV+W F+ L L P + WI CITT S+++ VNG
Sbjct: 442 LNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATG 501
Query: 139 KAFHAKKGLRQGDHISPYLFVICMEYLHKCLLGLKSYREFKFHPK 5
F + KGLRQGD +SPYLFV+ ME K L +HPK
Sbjct: 502 GFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPK 546