BLASTX nr result
ID: Mentha29_contig00033826
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00033826
(420 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis ... 53 3e-08
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 60 4e-07
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 60 4e-07
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th... 60 4e-07
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana] 60 4e-07
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 60 4e-07
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 60 4e-07
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 59 7e-07
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 59 9e-07
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 58 2e-06
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana] 58 2e-06
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 58 2e-06
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 58 2e-06
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana] 58 2e-06
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 58 2e-06
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana] 58 2e-06
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 58 2e-06
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana] 58 2e-06
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 58 2e-06
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 58 2e-06
>emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268350|emb|CAB78643.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 1942
Score = 53.1 bits (126), Expect(2) = 3e-08
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = -2
Query: 410 SDHEGN-WYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 261
+DH G+ W DS AT HITN +L + Y G +S+MVGNGN +PI+ G
Sbjct: 289 TDHSGSEWVTDSAATAHITNSPRHLQQTKSYAGSDSVMVGNGNFLPITHTG 339
Score = 53.1 bits (126), Expect(2) = 3e-08
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = -2
Query: 410 SDHEGN-WYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 261
+DH G+ W DS AT HITN +L + Y G +S+MVGNGN +PI+ G
Sbjct: 1189 TDHSGSEWVTDSAATAHITNSPRHLQQTKSYAGSDSVMVGNGNFLPITHTG 1239
Score = 30.4 bits (67), Expect(2) = 3e-08
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = -3
Query: 262 DKGTHKILLEGSLTNGLYQLD---LCHFLSKQQMSST 161
DK T K+LL+GS +GLY LD L F S +Q++++
Sbjct: 367 DKETKKLLLQGSNRDGLYVLDEPKLLVFYSSRQVAAS 403
Score = 30.4 bits (67), Expect(2) = 3e-08
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = -3
Query: 262 DKGTHKILLEGSLTNGLYQLD---LCHFLSKQQMSST 161
DK T K+LL+GS +GLY LD L F S +Q++++
Sbjct: 1267 DKETKKLLLQGSNRDGLYVLDEPKLLVFYSSRQVAAS 1303
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 261
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 295 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 339
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 261
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 330 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 374
>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
Length = 847
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 261
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 295 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 339
>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 261
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 325 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 369
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 261
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 330 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 374
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 261
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 330 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 374
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = -2
Query: 404 HEGNWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 261
+ GNW +DSGAT H+T+D +NLA+ YNGGE + + +G+ +PIS G
Sbjct: 329 NSGNWLLDSGATHHLTSDLNNLALHQPYNGGEEVTIADGSGLPISHSG 376
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 58.5 bits (140), Expect = 9e-07
Identities = 22/48 (45%), Positives = 35/48 (72%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL++ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 183 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 230
>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 395 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 252
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375