BLASTX nr result
ID: Mentha29_contig00033529
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00033529
(379 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 85 5e-16
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 81 5e-16
emb|CAN65213.1| hypothetical protein VITISV_009492 [Vitis vinifera] 79 7e-16
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 79 2e-15
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 78 1e-14
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 84 2e-14
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 82 3e-14
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera] 73 3e-14
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 82 3e-14
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 82 6e-14
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] 82 6e-14
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 77 7e-14
gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana] 78 1e-13
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi... 75 2e-13
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis... 77 1e-12
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 72 3e-12
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 76 6e-12
ref|XP_007024187.1| Cysteine-rich RLK (RECEPTOR-like protein kin... 66 8e-12
ref|XP_007023091.1| Uncharacterized protein TCM_027093 [Theobrom... 69 1e-11
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera] 75 1e-11
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 84.7 bits (208), Expect(2) = 5e-16
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +2
Query: 11 VPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTN 169
VPT H+K FGCLCYAST +DR KFSP+A C F+GYP G+KGYKLL+L+T+
Sbjct: 621 VPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETH 673
Score = 25.0 bits (53), Expect(2) = 5e-16
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPF 219
+ +SR +FHE+ FPF
Sbjct: 675 IIVSRHVVFHEELFPF 690
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 81.3 bits (199), Expect(2) = 5e-16
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +2
Query: 5 GKVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTNR 172
GK P L+TFGCLCY ST + R KF P++ CVFLGYP GYKGYKLL+L++N+
Sbjct: 730 GKAPQYDQLRTFGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNK 785
Score = 28.5 bits (62), Expect(2) = 5e-16
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPFQQHK 231
++ISR+ FHED FP +H+
Sbjct: 786 IYISRNVTFHEDIFPMAKHQ 805
>emb|CAN65213.1| hypothetical protein VITISV_009492 [Vitis vinifera]
Length = 659
Score = 79.0 bits (193), Expect(2) = 7e-16
Identities = 36/56 (64%), Positives = 40/56 (71%)
Frame = +2
Query: 2 FGKVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTN 169
+ +V + SHL FGCLCY STL R RTK SP+ VFLGYP GYKGYKLL L TN
Sbjct: 216 YNRVTSYSHLHIFGCLCYGSTLARHRTKLSPRTIPSVFLGYPPGYKGYKLLNLSTN 271
Score = 30.4 bits (67), Expect(2) = 7e-16
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPFQQH 228
++I+RD IFHE +FPFQ +
Sbjct: 273 IYITRDVIFHETSFPFQSN 291
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 79.3 bits (194), Expect(2) = 2e-15
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = +2
Query: 8 KVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTN 169
KVP +HLK+FGCLCYAST + R KF +A C FLGYP GYKGYKLL+L+++
Sbjct: 747 KVPDYTHLKSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESH 800
Score = 28.1 bits (61), Expect(2) = 2e-15
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPFQ 222
+FISR+ +F+ED FPF+
Sbjct: 802 IFISRNVVFYEDLFPFK 818
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 78.2 bits (191), Expect(2) = 1e-14
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +2
Query: 14 PTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTNRCS 178
P LKTFGCLCY+ST + R KF P+A CVFLGYP GYKGYKLL+++T+ S
Sbjct: 759 PAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVS 813
Score = 26.9 bits (58), Expect(2) = 1e-14
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPF 219
V ISR IFHED FPF
Sbjct: 812 VSISRHVIFHEDIFPF 827
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/74 (54%), Positives = 51/74 (68%)
Frame = +2
Query: 8 KVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTNRCS*AG 187
K+P SHL+ FGCLCY STL +RTKFSP+A VFLGYP G+KGYKLL+++T S +
Sbjct: 627 KLPDYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIETRSISISR 686
Query: 188 MTFFMKIPSPSSNI 229
T P SS++
Sbjct: 687 NTNPCSSPDISSDL 700
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 81.6 bits (200), Expect(2) = 3e-14
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +2
Query: 8 KVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTN 169
KVP + LK FGCLCY ST + R KF+P+A CVFLGYP GYKGYKLL+L+TN
Sbjct: 799 KVPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETN 852
Score = 22.3 bits (46), Expect(2) = 3e-14
Identities = 17/68 (25%), Positives = 22/68 (32%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPFQQHKPHXXXXXXXXXXXXXXXXXXXXXXXXXHHVSKFGRSIKPP 351
+ ISR +F+E FPF VS R +PP
Sbjct: 854 IHISRHVVFYETVFPFTDKTIIPRDVFDLVDPVHENIENPPSTSESAPKVSS-KRESRPP 912
Query: 352 THLHDYVC 375
+L DY C
Sbjct: 913 GYLQDYFC 920
>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
Length = 970
Score = 73.2 bits (178), Expect(2) = 3e-14
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = +2
Query: 38 FGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTN 169
FGCLCYASTLN TKF P A K VFLGYP GYK YKLL L TN
Sbjct: 392 FGCLCYASTLNHSHTKFPPHAIKAVFLGYPPGYKAYKLLNLSTN 435
Score = 30.8 bits (68), Expect(2) = 3e-14
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1
Query: 175 FISRDDIFHEDTFPFQ 222
FISRD IFHE FPFQ
Sbjct: 438 FISRDVIFHESIFPFQ 453
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 82.0 bits (201), Expect(2) = 3e-14
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +2
Query: 5 GKVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTN 169
GK+P S LKTFGCLCY+ST ++ R KF P++ CVFLGYP G+KGYKLL+L++N
Sbjct: 781 GKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESN 835
Score = 21.6 bits (44), Expect(2) = 3e-14
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 172 VFISRDDIFHEDTFP 216
V ISR+ FHE+ FP
Sbjct: 837 VHISRNVEFHEELFP 851
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 82.4 bits (202), Expect = 6e-14
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +2
Query: 14 PTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTNRCS*AGMT 193
P S LK FGCLCY ST + RTKF P+A C+FLGYP GYKGYKLL+++T S +
Sbjct: 774 PDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISRHV 833
Query: 194 FFMK--IPSPSSNI 229
F + P SSNI
Sbjct: 834 IFYEDIFPFASSNI 847
>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
Length = 1243
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/74 (52%), Positives = 49/74 (66%)
Frame = +2
Query: 11 VPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTNRCS*AGM 190
+P SHL+ FGCLCY STL +RTKFSP+A VFLGYP G+KGYKLL+++T S +
Sbjct: 570 LPDYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIETRSISISRN 629
Query: 191 TFFMKIPSPSSNIN 232
F + P S N
Sbjct: 630 VIFHEEIFPFSKTN 643
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 77.4 bits (189), Expect(2) = 7e-14
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +2
Query: 5 GKVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTN 169
G P L+TFGCLCY+ST + R KF P++ C+FLGYP GYKGYKL++L++N
Sbjct: 770 GTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESN 824
Score = 25.0 bits (53), Expect(2) = 7e-14
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPFQQH 228
VFISR+ FHE+ FP ++
Sbjct: 826 VFISRNVQFHEEVFPLAKN 844
>gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]
Length = 1309
Score = 78.2 bits (191), Expect(2) = 1e-13
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 14 PTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTNRCS 178
PT LKTFGCLCY+S+ + R KF P+A CVFLGYP GYKGYKLL+++T+ S
Sbjct: 696 PTYESLKTFGCLCYSSSSPKHRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVS 750
Score = 23.9 bits (50), Expect(2) = 1e-13
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPF 219
V ISR IFHED F F
Sbjct: 749 VSISRHVIFHEDIFSF 764
>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1264
Score = 75.1 bits (183), Expect(2) = 2e-13
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +2
Query: 5 GKVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTN 169
G P L+TFGCLCY+ST + R KF P++ C+FLGY GYKGYKL++L++N
Sbjct: 629 GTAPQYGQLRTFGCLCYSSTSPKQRHKFQPRSKACIFLGYSSGYKGYKLMDLESN 683
Score = 25.8 bits (55), Expect(2) = 2e-13
Identities = 21/76 (27%), Positives = 26/76 (34%), Gaps = 8/76 (10%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPFQQHK--PHXXXXXXXXXXXXXXXXXXXXXXXXXHHVSKF----- 330
+FISR+ +F E+ FP K +S
Sbjct: 685 IFISRNVVFLEEVFPLAGTKKSADSLKLCTPLVLVPSGIQQQSSFSSLSSQISDLPPQIS 744
Query: 331 -GRSIKPPTHLHDYVC 375
R KPPTHL DYVC
Sbjct: 745 SQRDRKPPTHLSDYVC 760
>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like
polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 76.6 bits (187), Expect(2) = 1e-12
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = +2
Query: 8 KVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTN 169
K P S LK FGCLC+ ST +RTKF+P+A CVFLGYP GYKGYK+L+L+++
Sbjct: 790 KQPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESH 843
Score = 21.6 bits (44), Expect(2) = 1e-12
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPFQ 222
V +SR+ +F E FPF+
Sbjct: 845 VTVSRNVVFKEHVFPFK 861
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
score: 11.19) [Arabidopsis thaliana]
Length = 1633
Score = 72.4 bits (176), Expect(2) = 3e-12
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +2
Query: 8 KVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTNRCS 178
K+P + LK+ CLCYAST DR KFSP+A CVFLGYP GYKGYK+L+L+++ S
Sbjct: 713 KIPDYTLLKS--CLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSIS 767
Score = 24.6 bits (52), Expect(2) = 3e-12
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPFQQHK 231
+ I+R+ +FHE FPF+ K
Sbjct: 766 ISITRNVVFHETKFPFKTSK 785
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 75.9 bits (185), Expect = 6e-12
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +2
Query: 2 FGKVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTNRCS* 181
F K P ++ K FGCLC+AST+ +R KF P+A+KC+FLGYP KGYK+L+L T +
Sbjct: 718 FQKPPNYNYFKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLDLTTXKXFV 777
Query: 182 AGMTFFMKIPSPS 220
+ F + PS
Sbjct: 778 SRNVJFHESTFPS 790
>ref|XP_007024187.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao] gi|508779553|gb|EOY26809.1| Cysteine-rich RLK
(RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 1255
Score = 66.2 bits (160), Expect(2) = 8e-12
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = +2
Query: 2 FGKVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTNR 172
+ + P+ HL+ FG LC+ STL++ R K +A+KC+FLGYP KGY++ +L+ NR
Sbjct: 513 YKRQPSYEHLRVFGSLCFVSTLSQHRKKLDQRATKCIFLGYPNNTKGYRVYDLNANR 569
Score = 29.3 bits (64), Expect(2) = 8e-12
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPFQ 222
+ ISR+ +FHE TFPFQ
Sbjct: 570 IIISRNIVFHEGTFPFQ 586
>ref|XP_007023091.1| Uncharacterized protein TCM_027093 [Theobroma cacao]
gi|508778457|gb|EOY25713.1| Uncharacterized protein
TCM_027093 [Theobroma cacao]
Length = 994
Score = 68.9 bits (167), Expect(2) = 1e-11
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +2
Query: 8 KVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTN 169
K+P+ HL+ FGCLC+ TL ++R K +A+KC+FLGYP KGYK+ +L N
Sbjct: 532 KLPSYDHLRVFGCLCFMFTLTQNRKKLDKRATKCIFLGYPNNMKGYKVYDLSAN 585
Score = 26.2 bits (56), Expect(2) = 1e-11
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 172 VFISRDDIFHEDTFPFQ 222
V SR+ IFHE TFPF+
Sbjct: 587 VLKSRNVIFHEQTFPFR 603
>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
Length = 1125
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 7/82 (8%)
Frame = +2
Query: 2 FGKVPTNSHLKTFGCLCYASTLNRDRTKFSPKASKCVFLGYPQGYKGYKLLELDTNRCS* 181
+GK+P+ SH++ FGCL YA+ ++ KF+P+A +C+FLGYP G K YKL +LDT++
Sbjct: 463 YGKLPSYSHIRVFGCLAYATNVHVPH-KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFT 521
Query: 182 AGMTFFMK-------IPSPSSN 226
+ F + IPSPSSN
Sbjct: 522 SRDVVFHETIFPYESIPSPSSN 543