BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00032954
         (580 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   177   2e-42
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             174   1e-41
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   173   3e-41
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                172   8e-41
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...   170   2e-40
gb|AAU90115.1| putative polyprotein [Oryza sativa Japonica Group]     167   2e-39
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     166   3e-39
gb|AAT93843.1| putative polyprotein [Oryza sativa Japonica Group]     166   3e-39
gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subc...   165   7e-39
gb|ABA99729.1| retrotransposon protein, putative, unclassified [...   164   2e-38
gb|AAX96029.1| retrotransposon protein, putative, unclassified [...   164   2e-38
emb|CAN78757.1| hypothetical protein VITISV_035650 [Vitis vinifera]   164   2e-38
gb|ABA93438.2| retrotransposon protein, putative, Ty3-gypsy subc...   164   2e-38
gb|ABF94998.1| transposon protein, putative, unclassified [Oryza...   164   2e-38
gb|ABA94207.1| retrotransposon protein, putative, unclassified [...   163   4e-38
gb|ABA95559.1| retrotransposon protein, putative, unclassified [...   162   5e-38
gb|AAU90208.1| putative polyprotein [Oryza sativa Japonica Group]     162   5e-38
gb|ABA97229.1| retrotransposon protein, putative, unclassified [...   162   6e-38
gb|ABA96243.2| retrotransposon protein, putative, unclassified [...   162   8e-38
gb|AAU10764.1| putative polyprotein [Oryza sativa Japonica Group]     162   8e-38

>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  177 bits (448), Expect = 2e-42
 Identities = 92/195 (47%), Positives = 120/195 (61%), Gaps = 5/195 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKARLGKAKGNWADELDSVLWAYRTSPRTTTG 399
            GI+  +  + +PQ NGQ E  N TI+S +K RL   KG W DEL  VLWAYRT+PR +TG
Sbjct: 1085 GIKVSYSTLRYPQGNGQAEAANKTILSNLKKRLNHLKGGWYDELQPVLWAYRTTPRRSTG 1144

Query: 398  ESPFNLVYGSTAVVPAEAEAKSHRILK--YDENQNLGLLRENLDLIEEHRAEAQNRAERY 225
            E+PF+LVYG  AVVPAE      R  +   +E +N  +L ++LD I E R +A  + + Y
Sbjct: 1145 ETPFSLVYGMKAVVPAELNVPGLRRTEAPLNEKENSAMLDDSLDTINERRDQALIQIQNY 1204

Query: 224  KQQMRNAYNKKVQARQFEKGDLVLKRADALKP---TGKLDPNWEGPYIVAKVLKGGAYEL 54
            +      YN KV++R F  GD VLKR    K     GKL  NWEGPYIV +V++ G Y L
Sbjct: 1205 QHAAARYYNSKVKSRPFFVGDYVLKRVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVYRL 1264

Query: 53   RDAEGRDLPRPWNIN 9
            +D E R + RPWN+N
Sbjct: 1265 KDLEDRPVQRPWNVN 1279


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  174 bits (442), Expect = 1e-41
 Identities = 91/197 (46%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKARLGKAKGNWADELDSVLWAYRTSPRTTTG 399
            GI+  +    +PQ NGQ E  N TI+S +K RL   KG W +EL  VLWAYRT+PR  TG
Sbjct: 902  GIKVSYSTPRYPQGNGQAEAANKTILSNLKKRLNHLKGGWYEELQPVLWAYRTTPRRPTG 961

Query: 398  ESPFNLVYGSTAVVPAEAEAKSHRILK--YDENQNLGLLRENLDLIEEHRAEAQNRAERY 225
            E+PF+LVYG  AVVPAE      R  +   +E +N  +L ++LD I E R +A  R + Y
Sbjct: 962  ETPFSLVYGMEAVVPAELNVPGLRRTEAPLNEEENSAMLNDSLDTINERRDQALIRIQNY 1021

Query: 224  KQQMRNAYNKKVQARQFEKGDLVLKRADALKP---TGKLDPNWEGPYIVAKVLKGGAYEL 54
            +Q     YN KV++R F  GD VL+R    K     GKL  NWEGPYI+ +V++ G Y L
Sbjct: 1022 QQAAARYYNSKVKSRPFFVGDYVLRRVFDNKKEEGAGKLGINWEGPYIITEVVRNGVYRL 1081

Query: 53   RDAEGRDLPRPWNINNL 3
            +D E   + RPWN+ NL
Sbjct: 1082 KDLEDNPVKRPWNVINL 1098


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  173 bits (438), Expect = 3e-41
 Identities = 89/187 (47%), Positives = 119/187 (63%), Gaps = 5/187 (2%)
 Frame = -3

Query: 548  HPQANGQVEVTNITIVSGIKARLGKAKGNWADELDSVLWAYRTSPRTTTGESPFNLVYGS 369
            +PQ NGQ E TN TI+ G+K RL + KG WADELD VLW+YRT+PR +T  +PF+L YG 
Sbjct: 1596 YPQCNGQAEATNKTILDGLKKRLDEKKGAWADELDGVLWSYRTTPRRSTDRTPFSLTYGM 1655

Query: 368  TAVVPAEAEAKSHR--ILKYDENQNLGLLRENLDLIEEHRAEAQNRAERYKQQMRNAYNK 195
             A+ P EA   + R  +L  D   N  +L +NLD +EE R +A  R + Y+Q     YNK
Sbjct: 1656 EALAPCEAGLPTVRRSMLINDPTLNDQMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNK 1715

Query: 194  KVQARQFEKGDLVLKRA---DALKPTGKLDPNWEGPYIVAKVLKGGAYELRDAEGRDLPR 24
            KV+ R F +GDLVL++       +  GKL  +WEGPY+++KV+K G YEL   +G  +PR
Sbjct: 1716 KVKNRLFAEGDLVLRKVFENTVEQDAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPR 1775

Query: 23   PWNINNL 3
             WN  NL
Sbjct: 1776 SWNSANL 1782


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score =  172 bits (435), Expect = 8e-41
 Identities = 87/195 (44%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKARLGKAKGNWADELDSVLWAYRTSPRTTTG 399
            GI+  +   A+PQ N Q E TN  I++G+K  L  AKG W +EL  VLWAYRT+PR +TG
Sbjct: 907  GIRNGYSTPAYPQGNSQAEATNKVILAGLKKHLDDAKGRWVEELPHVLWAYRTTPRRSTG 966

Query: 398  ESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAERYKQ 219
            E+PF++ YG  AV+P E    + +  +Y+   N  +L ++L+ IEE R  A  +   Y+Q
Sbjct: 967  ETPFSMTYGMEAVIPLELGFPTLKFDQYNNVTNHDMLHDSLNTIEERREVASVKMGSYQQ 1026

Query: 218  QMRNAYNKKVQARQFEKGDLVLKR--ADALKPT-GKLDPNWEGPYIVAKVLKGGAYELRD 48
            +++ AY+K V++R    GDLVL++    A  P  GKL  NWEGPY +  V   GAY L D
Sbjct: 1027 KLKQAYDKGVKSRPLVPGDLVLRKVVGTARNPAWGKLGTNWEGPYRITSVAGIGAYRLED 1086

Query: 47   AEGRDLPRPWNINNL 3
             +GR + RPWN+NNL
Sbjct: 1087 LDGRVVHRPWNVNNL 1101


>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score =  170 bits (431), Expect = 2e-40
 Identities = 90/195 (46%), Positives = 117/195 (60%), Gaps = 3/195 (1%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKARLGKAKGNWADELDSVLWAYRTSPRTTTG 399
            G+  +F   AHPQANGQVE  N  I   +K RLG+ KG W DEL  VLWAYRT+ +T TG
Sbjct: 1667 GVDLKFCTPAHPQANGQVEAANKVIKKLLKTRLGEKKGAWVDELAGVLWAYRTTHKTATG 1726

Query: 398  ESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAERYKQ 219
            E+PF L +G  AV+PAE    +HR   + E QN   +  +LDL+EE R  A  +  + +Q
Sbjct: 1727 ETPFALAFGHEAVIPAEIGVGTHRTEYFIEEQNDEQICLSLDLLEERREGAAQKVAQCQQ 1786

Query: 218  QMRNAYNKKVQARQFEKGDLVLKRA--DALKPT-GKLDPNWEGPYIVAKVLKGGAYELRD 48
            ++   YNK V+ RQF  GD VL+R   +   P  G L P WEGPY V +    GAY+L  
Sbjct: 1787 RVMRYYNKNVRVRQFRAGDWVLRRVNQNTRNPNHGALGPKWEGPYRVIRATGPGAYKLAY 1846

Query: 47   AEGRDLPRPWNINNL 3
             +GRD+ R WN  +L
Sbjct: 1847 QDGRDVKRSWNAEHL 1861


>gb|AAU90115.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1626

 Score =  167 bits (422), Expect = 2e-39
 Identities = 87/196 (44%), Positives = 121/196 (61%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            GI+  F + AHP++NGQVE  N  I+ G+K +    L K   +W +EL +VLW  RT+P 
Sbjct: 1426 GIKLCFASPAHPKSNGQVERANAEILKGLKTKTYNVLKKHGDSWLEELPTVLWENRTTPS 1485

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
              TGE+PF LVYG+ AV+P+E    S R++ Y+E     L R++LD +EE R  A  RA 
Sbjct: 1486 RATGETPFFLVYGAEAVLPSELSLGSPRVVLYNEANQDDLCRDDLDYLEEQRRGAALRAA 1545

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
            RY+Q +R  + + V+AR  + GDLVL+R  +     KL P WEGPY V KV + G+  L 
Sbjct: 1546 RYQQSLRRYHQRHVRARSLQVGDLVLRRVQSRLGLSKLSPMWEGPYKVIKVPRPGSVRLT 1605

Query: 50   DAEGRDLPRPWNINNL 3
              +G +LP PWNI +L
Sbjct: 1606 MEDGTELPNPWNIEHL 1621


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  166 bits (421), Expect = 3e-39
 Identities = 86/195 (44%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKARLGKAKGNWADELDSVLWAYRTSPRTTTG 399
            GI+  + +V HPQ+NGQ E  N TI++G+K ++   KG WADEL  VLW+ RT+ +  TG
Sbjct: 1108 GIKFAYSSVCHPQSNGQAEAANKTILNGLKKKVEDLKGRWADELPGVLWSLRTTEKEATG 1167

Query: 398  ESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAERYKQ 219
             SPF+LVYGS AV+P EA   + R   ++  +N   L+ +LDL+EE R  A+     Y+ 
Sbjct: 1168 YSPFHLVYGSEAVLPIEAVVPTFRTATFNPVENEEGLKASLDLVEESRDTARLNLAVYQN 1227

Query: 218  QMRNAYNKKVQARQFEKGDLVLKRADALKP---TGKLDPNWEGPYIVAKVLKGGAYELRD 48
            +MR AYN +V  R    GDLVL+++ A       GK+  NWEGPY V + ++ G Y L D
Sbjct: 1228 RMRRAYNHRVHKRDLRVGDLVLRKSTATNKGNIHGKMTTNWEGPYKVVEEMRPGTYRLTD 1287

Query: 47   AEGRDLPRPWNINNL 3
             EG  L   WN +NL
Sbjct: 1288 MEGVPLMSHWNTDNL 1302


>gb|AAT93843.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1723

 Score =  166 bits (421), Expect = 3e-39
 Identities = 81/196 (41%), Positives = 121/196 (61%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            G++  F +V+HPQ+NGQVE  N  ++ GIK R    L      W +EL SVLWA RT+P 
Sbjct: 1523 GVKICFASVSHPQSNGQVERANSIVLQGIKTRVYDRLMSHDKKWVEELPSVLWAVRTTPT 1582

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
            T+  E+PF LVYGS A++P E   +S R+ KY +        ++++L+EEHR     RA 
Sbjct: 1583 TSNKETPFFLVYGSEAMLPTELRHQSTRVQKYSDEDQEEQRNDDVNLLEEHRERVAVRAA 1642

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
             Y+Q +R  + K+++AR    GD VL+R  +     KL P WEGPY++ +VL+ GA+++ 
Sbjct: 1643 SYQQALRRYHEKRIRARTLSIGDYVLRRVQSQAGRNKLSPKWEGPYMITQVLRPGAFKIA 1702

Query: 50   DAEGRDLPRPWNINNL 3
            + +GR+L   WNI+ L
Sbjct: 1703 NGDGRELANSWNIDQL 1718


>gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1564

 Score =  165 bits (418), Expect = 7e-39
 Identities = 86/196 (43%), Positives = 119/196 (60%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            GI+  F + AHP++NGQVE  N  I+ G+K +    L +   +W +EL +VLWA RT+P 
Sbjct: 1364 GIKLCFASPAHPKSNGQVERANAEILKGLKTKTYNVLKRHGDSWLEELPAVLWANRTTPS 1423

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
              TGE+PF LVYG+ AV+P+E    S R+  Y E     L R++LD +EE R  A  RA 
Sbjct: 1424 RATGETPFFLVYGAEAVLPSELSLGSPRVTLYSETNQDDLRRDDLDYLEERRRRAALRAA 1483

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
            RY+Q +R  + + V+AR  + GDLVL+R  +     KL P WEGPY V  V + G+  L 
Sbjct: 1484 RYQQSLRRYHQRHVRARSLQVGDLVLRRVQSRLGLSKLSPTWEGPYKVICVPRPGSVRLT 1543

Query: 50   DAEGRDLPRPWNINNL 3
              +G +LP PWNI +L
Sbjct: 1544 MEDGTELPNPWNIEHL 1559


>gb|ABA99729.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  164 bits (415), Expect = 2e-38
 Identities = 87/196 (44%), Positives = 119/196 (60%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            GI+  F + AHP++NGQVE  N  I+ G+K +    L K   +W +EL +VLWA RT+P 
Sbjct: 1120 GIKLCFASPAHPKSNGQVERANAEILKGLKTKTYNVLKKHGDSWLEELPAVLWANRTTPS 1179

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
              TGE+PF LVYG+ AV+P+E    S R+  YDE +   L R++LD  EE R  A  RA 
Sbjct: 1180 RATGETPFFLVYGAKAVLPSELSLGSPRVALYDEAKQDDLRRDDLDYFEERRRRAALRAA 1239

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
            RY+Q +R  + + V+ R  + GD+VL R  +     KL P WEGPY V  VL+ G+  L 
Sbjct: 1240 RYQQSLRRYHQRHVRDRSLKVGDVVLCRVQSRLGLSKLSPMWEGPYKVIGVLRLGSVRLT 1299

Query: 50   DAEGRDLPRPWNINNL 3
              +G +LP PWNI +L
Sbjct: 1300 TEDGTELPNPWNIEHL 1315


>gb|AAX96029.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|77549917|gb|ABA92714.1| transposon
            protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 1058

 Score =  164 bits (415), Expect = 2e-38
 Identities = 80/196 (40%), Positives = 121/196 (61%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            G++  F +V+HP +NGQVE  N  ++ GIK R    L      W +EL SVLWA RT+P 
Sbjct: 851  GVKICFASVSHPYSNGQVERANSIVLQGIKTRVYDRLMSHDKKWVEELPSVLWAVRTTPT 910

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
            T+  ++PF LVYGS A++P E   +S R+ +Y + +      ++++L+EEHR     RA 
Sbjct: 911  TSNKKTPFFLVYGSEAMLPTELRHQSTRVQRYYDEEQEEQRSDDVNLLEEHRERVAVRAA 970

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
             Y+Q +R  Y K+++AR    GD VL+R  +     KL P WEGPY++ +VL+ GA+++ 
Sbjct: 971  SYQQALRRYYEKRIKARTLSIGDYVLRRVQSQAGHNKLSPKWEGPYMITQVLRPGAFKIA 1030

Query: 50   DAEGRDLPRPWNINNL 3
            D +GR+L   WNI+ L
Sbjct: 1031 DVDGRELANSWNIDQL 1046


>emb|CAN78757.1| hypothetical protein VITISV_035650 [Vitis vinifera]
          Length = 888

 Score =  164 bits (415), Expect = 2e-38
 Identities = 85/194 (43%), Positives = 114/194 (58%), Gaps = 3/194 (1%)
 Frame = -3

Query: 575  IQQRFVAVAHPQANGQVEVTNITIVSGIKARLGKAKGNWADELDSVLWAYRTSPRTTTGE 396
            I+  +    +PQ+NGQVE TN T+++ +K RL +AKG W +EL  VLWAYRT+P   TG 
Sbjct: 690  IRNSYSTPRYPQSNGQVEATNKTLITALKKRLEQAKGKWVEELPGVLWAYRTTPGRPTGN 749

Query: 395  SPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAERYKQQ 216
            +PF L YG  AV+P E    + R     +N     L  NLD  +E R  A  R   Y+Q+
Sbjct: 750  TPFALAYGMNAVIPTEIGLPTIRTDAAKQNDANAELGRNLDWTDEVRESAAIRMANYQQR 809

Query: 215  MRNAYNKKVQARQFEKGDLVLKRA---DALKPTGKLDPNWEGPYIVAKVLKGGAYELRDA 45
                YN+KV+ R F+ G LVL++     A    GK   NWEGPYIV+K  + GAY L+  
Sbjct: 810  ASAHYNRKVKPRSFKNGTLVLRKVFENTAEVGAGKFQANWEGPYIVSKASESGAYHLQKL 869

Query: 44   EGRDLPRPWNINNL 3
            +G  L RPWN++NL
Sbjct: 870  DGTPLLRPWNVSNL 883


>gb|ABA93438.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1129

 Score =  164 bits (415), Expect = 2e-38
 Identities = 80/196 (40%), Positives = 119/196 (60%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKA----RLGKAKGNWADELDSVLWAYRTSPR 411
            G++  F +V+HPQ+NGQVE  N  ++ GIK     RL      W +EL S+LWA RT+P 
Sbjct: 929  GVKICFASVSHPQSNGQVERANGIVLQGIKTHVYDRLMSHDKKWVEELPSILWAVRTTPT 988

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
            T+  E+PF L+YGS A++P E   +S R+ KY +        ++++L+EEHR     RA 
Sbjct: 989  TSNKETPFFLIYGSEAMLPTELRHQSTRVQKYSDEYQEEQRYDDVNLLEEHRERVAVRAA 1048

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
             Y+Q +R  + K++QAR    GD VL+R  +     KL P WEGPY + +VL+ GA+++ 
Sbjct: 1049 SYQQALRRYHEKRIQARTLSIGDYVLRRVQSQAGRNKLSPKWEGPYTITQVLRPGAFKIA 1108

Query: 50   DAEGRDLPRPWNINNL 3
              +GR+L   WNI+ L
Sbjct: 1109 SGDGRELANSWNIDQL 1124


>gb|ABF94998.1| transposon protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 977

 Score =  164 bits (415), Expect = 2e-38
 Identities = 81/196 (41%), Positives = 121/196 (61%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            G++  F +V+HPQ+NGQVE  N  ++ G+K R    L      W +EL SVLWA RT+P 
Sbjct: 777  GVKICFASVSHPQSNGQVERANGIVLQGMKTRVYDRLMSHDKRWVEELPSVLWAVRTTPT 836

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
            T+  E+PF LV+GS A++P E + +S R+ KY +    G    +++L+EEHR     RA 
Sbjct: 837  TSNKETPFFLVHGSKAMLPGELQHQSTRVQKYSDENQEGQQDIDVNLLEEHRERVAVRAA 896

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
             Y+Q +R  + K+++AR    GD VL+R  +     KL P WEGPY + +VL+ GA+++ 
Sbjct: 897  SYQQTLRRYHEKRIRARILSIGDYVLRRVQSQAGRNKLSPKWEGPYTITQVLRPGAFKIA 956

Query: 50   DAEGRDLPRPWNINNL 3
            D +GR+L   WNI+ L
Sbjct: 957  DGDGRELANSWNIDQL 972


>gb|ABA94207.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 277

 Score =  163 bits (412), Expect = 4e-38
 Identities = 82/187 (43%), Positives = 115/187 (61%), Gaps = 4/187 (2%)
 Frame = -3

Query: 551 AHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPRTTTGESPFN 384
           AHP++NGQVE  N  I+ G+K +    L K + +W +EL +VLWA RT+P   TGE+PF 
Sbjct: 86  AHPKSNGQVERANAEILKGLKTKTYNILKKHEDSWLEELPAVLWANRTTPSRATGETPFF 145

Query: 383 LVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAERYKQQMRNA 204
           LVYG+ AV+P E   +S R+  YDE     L R++LD +EE R  A  R  RY+Q +R  
Sbjct: 146 LVYGAEAVLPLELSLRSPRVALYDEANQDDLRRDDLDYLEERRRRAALRTARYQQALRRY 205

Query: 203 YNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELRDAEGRDLPR 24
           + + ++AR  + GDLVL+R  +     KL P WEGPY V  V + G+  L   +G +LP 
Sbjct: 206 HQRHIRARSLQVGDLVLRRVQSRLGLSKLSPMWEGPYKVIGVPRLGSVRLTTGDGTELPN 265

Query: 23  PWNINNL 3
           PWN+ +L
Sbjct: 266 PWNVKHL 272


>gb|ABA95559.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1922

 Score =  162 bits (411), Expect = 5e-38
 Identities = 87/196 (44%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            GI+  F + AHP++NGQVE  N  I+ G+K +    L K   +W +EL +VLWA RT+P 
Sbjct: 1722 GIKLCFASPAHPESNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPS 1781

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
              TGE+PF LVYG+ AV+P+E   KS R   Y E     L R++LD +EE R  A  RA 
Sbjct: 1782 RATGETPFFLVYGAEAVLPSELTLKSPRATMYCEADQDQLRRDDLDYLEERRRRAALRAA 1841

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
            RY+Q +R  + + V+AR     DLVL+R        KL P WEGPY V  V + G+ +L 
Sbjct: 1842 RYQQSLRRYHQRHVRARSLCVDDLVLRRVQTRAGLSKLSPMWEGPYRVVGVPRPGSIQLA 1901

Query: 50   DAEGRDLPRPWNINNL 3
              +G +LP PWNI +L
Sbjct: 1902 TGDGTELPNPWNIEHL 1917


>gb|AAU90208.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1862

 Score =  162 bits (411), Expect = 5e-38
 Identities = 87/196 (44%), Positives = 118/196 (60%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            GI+  F + AHP++NGQVE TN  I+ G+K +    L K   +W +EL +VLWA RT+P 
Sbjct: 1662 GIKLCFASPAHPRSNGQVERTNAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPS 1721

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
              TGE+PF LVYG+ AV+P+E   +S R+  Y E     L R++LD +EE R  A  RA 
Sbjct: 1722 RATGETPFFLVYGAEAVLPSELTLRSPRVTMYCEADQDQLRRDDLDYLEERRRRAALRAA 1781

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
            RY+Q +R  + + V+AR     DLVL+R        KL P WEGPY V  V   G+  L 
Sbjct: 1782 RYQQSLRRYHQRHVRARSLCVDDLVLRRVQTRSGLSKLSPMWEGPYRVIGVPLPGSVRLA 1841

Query: 50   DAEGRDLPRPWNINNL 3
             ++G +LP PWNI +L
Sbjct: 1842 TSDGTELPNPWNIEHL 1857


>gb|ABA97229.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2027

 Score =  162 bits (410), Expect = 6e-38
 Identities = 87/196 (44%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            GI+  F + AHP++NGQVE  N+ I+ G+K +    L K   +W +EL +VLWA RT+P 
Sbjct: 1827 GIKLCFASPAHPRSNGQVERANVEILRGLKTKTFNILKKHGDSWIEELPAVLWANRTTPS 1886

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
              TGE+PF LVYG+ AV+P+E   KS R   Y E     L R++LD +EE R  A  RA 
Sbjct: 1887 RATGETPFFLVYGAEAVLPSELTLKSPRATMYCEADQDQLRRDDLDYLEERRRRAALRAA 1946

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
            RY+Q +R  + + V+AR     DLVL+R        KL P WEGPY V  V + G+  L 
Sbjct: 1947 RYQQSLRRYHQRHVRARSLCVDDLVLRRVQTRAGLSKLSPMWEGPYRVIGVPRPGSVRLA 2006

Query: 50   DAEGRDLPRPWNINNL 3
              +G +LP PWNI +L
Sbjct: 2007 TGDGTELPNPWNIEHL 2022


>gb|ABA96243.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1419

 Score =  162 bits (409), Expect = 8e-38
 Identities = 81/196 (41%), Positives = 118/196 (60%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            G++  F +V+HPQ+NGQVE  N  ++ GIK R    L      W +EL SVLWA RT+P 
Sbjct: 1219 GVKICFASVSHPQSNGQVERANDIVLQGIKTRVYDRLMSHDKKWVEELPSVLWAVRTTPT 1278

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
            T+  E+PF LVYGS A++P E   +S R+ KY +         +++L++EHR     RA 
Sbjct: 1279 TSNKETPFFLVYGSEAMLPGELRHQSTRVQKYSDENQEEQRDIDVNLLKEHRERVAVRAA 1338

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
             Y+Q +R  + K+++AR    GD VL+R        KL P WEGPY + +VL+ GA+++ 
Sbjct: 1339 SYQQALRRYHEKRIRARILSIGDYVLRRVQTQAGRNKLSPKWEGPYTITQVLRPGAFKIA 1398

Query: 50   DAEGRDLPRPWNINNL 3
            D +GR+L   WNI+ L
Sbjct: 1399 DGDGRELANSWNIDQL 1414


>gb|AAU10764.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1743

 Score =  162 bits (409), Expect = 8e-38
 Identities = 86/196 (43%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  GIQQRFVAVAHPQANGQVEVTNITIVSGIKAR----LGKAKGNWADELDSVLWAYRTSPR 411
            GI+  F + AHP++NGQVE  N  I+ G+K +    L K   +W +EL +VLWA RT+P 
Sbjct: 1543 GIKLCFASPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPS 1602

Query: 410  TTTGESPFNLVYGSTAVVPAEAEAKSHRILKYDENQNLGLLRENLDLIEEHRAEAQNRAE 231
              TGE+PF LVYG+ AV+P+E   +S R+  Y E     L R++LD +EE R  A  RA 
Sbjct: 1603 RATGETPFFLVYGAEAVLPSELTLRSPRVTMYCEADQDQLRRDDLDYLEERRRRAALRAA 1662

Query: 230  RYKQQMRNAYNKKVQARQFEKGDLVLKRADALKPTGKLDPNWEGPYIVAKVLKGGAYELR 51
            RY+Q +R  + + V+AR     DLVL+R        KL P WEGPY V  V + G+  L 
Sbjct: 1663 RYQQSLRRYHQRHVRARSLCVNDLVLRRVQTRAGLSKLSPMWEGPYRVIGVPRPGSVRLA 1722

Query: 50   DAEGRDLPRPWNINNL 3
              +G +LP PWNI +L
Sbjct: 1723 TGDGTELPNPWNIEHL 1738